mm10_v2_chr10_+_79881023_79881042	5.90077	Zkscan1	ENSMUST00000166201.1|Prtn3|ENSMUSG00000057729.6|proteinase 3
mm10_v2_chr2_+_84734050_84734107	4.60338	Zkscan1	ENSMUST00000090729.2|Ypel4|ENSMUSG00000034059.7|yippee-like 4 (Drosophila)
mm10_v2_chrX_-_49797700_49797755	4.06033	Zkscan1	ENSMUST00000033442.7|Igsf1|ENSMUSG00000031111.10|immunoglobulin superfamily, member 1 	ENSMUST00000114891.1|Igsf1|ENSMUSG00000031111.10|immunoglobulin superfamily, member 1
mm10_v2_chr2_+_153492790_153492790	3.7873	Zkscan1	ENSMUST00000109783.1|4930404H24Rik|ENSMUSG00000079001.1|RIKEN cDNA 4930404H24 gene
mm10_v2_chr15_-_74983430_74983430	3.50037	Zkscan1	ENSMUST00000023250.4|Ly6i|ENSMUSG00000022586.5|lymphocyte antigen 6 complex, locus I 	ENSMUST00000166694.1|Ly6i|ENSMUSG00000022586.5|lymphocyte antigen 6 complex, locus I
mm10_v2_chr15_-_75111684_75111684	3.40338	Zkscan1	ENSMUST00000100542.3|Ly6c2|ENSMUSG00000022584.8|lymphocyte antigen 6 complex, locus C2
mm10_v2_chr9_+_51213683_51213697	3.15469	Zkscan1	ENSMUST00000034554.7|Pou2af1|ENSMUSG00000032053.7|POU domain, class 2, associating factor 1
mm10_v2_chr19_-_61228396_61228454	3.06211	Zkscan1	ENSMUST00000076046.6|Csf2ra|ENSMUSG00000059326.6|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)
mm10_v2_chr7_+_24370255_24370312	3.04015	Zkscan1	ENSMUST00000171904.1|Kcnn4|ENSMUSG00000054342.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm10_v2_chr9_-_103480328_103480348	2.85422	Zkscan1	ENSMUST00000124310.2|Bfsp2|ENSMUSG00000032556.9|beaded filament structural protein 2, phakinin
mm10_v2_chr2_-_156839790_156839892	2.83751	Zkscan1	ENSMUST00000134838.1|Gm14230|ENSMUSG00000087179.2|predicted gene 14230 	ENSMUST00000137463.1|Gm14230|ENSMUSG00000087179.2|predicted gene 14230 	ENSMUST00000149275.2|Gm14230|ENSMUSG00000087179.2|predicted gene 14230
mm10_v2_chr17_-_33718591_33718690	2.82083	Zkscan1	ENSMUST00000174040.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000173015.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000066121.6|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000172767.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2 	ENSMUST00000173329.1|March2|ENSMUSG00000079557.4|membrane-associated ring finger (C3HC4) 2
mm10_v2_chr12_+_109545390_109545443	2.76588	Zkscan1	ENSMUST00000146701.1|Meg3|ENSMUSG00000021268.11|maternally expressed 3
mm10_v2_chr15_-_78572754_78572790	2.3168	Zkscan1	ENSMUST00000043214.6|Rac2|ENSMUSG00000033220.6|RAS-related C3 botulinum substrate 2
mm10_v2_chrX_+_20870166_20870226	2.12551	Zkscan1	ENSMUST00000115342.3|Timp1|ENSMUSG00000001131.5|tissue inhibitor of metalloproteinase 1 	ENSMUST00000009530.4|Timp1|ENSMUSG00000001131.5|tissue inhibitor of metalloproteinase 1
mm10_v2_chr7_-_132813799_132813905	2.1153	Zkscan1	ENSMUST00000097998.2|Fam53b|ENSMUSG00000030956.9|family with sequence similarity 53, member B
mm10_v2_chr2_+_31245801_31245900	2.10476	Zkscan1	ENSMUST00000000199.7|Ncs1|ENSMUSG00000062661.6|neuronal calcium sensor 1
mm10_v2_chr4_-_141078302_141078357	1.85816	Zkscan1	ENSMUST00000030760.8|Necap2|ENSMUSG00000028923.8|NECAP endocytosis associated 2
mm10_v2_chr15_-_75048837_75048837	1.84415	Zkscan1	ENSMUST00000179762.1|Ly6c1|ENSMUSG00000079018.4|lymphocyte antigen 6 complex, locus C1 	ENSMUST00000065408.9|Ly6c1|ENSMUSG00000079018.4|lymphocyte antigen 6 complex, locus C1
mm10_v2_chr12_-_79007276_79007346	1.76442	Zkscan1	ENSMUST00000056660.6|Tmem229b|ENSMUSG00000046157.7|transmembrane protein 229B 	ENSMUST00000174721.1|Tmem229b|ENSMUSG00000046157.7|transmembrane protein 229B
mm10_v2_chr2_+_156840077_156840141	1.75884	Zkscan1	ENSMUST00000081335.6|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2 	ENSMUST00000073352.3|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2
mm10_v2_chr7_-_132813528_132813667	1.74084	Zkscan1	ENSMUST00000097999.2|Fam53b|ENSMUSG00000030956.9|family with sequence similarity 53, member B
mm10_v2_chr6_-_83536215_83536265	1.69452	Zkscan1	ENSMUST00000075161.5|Actg2|ENSMUSG00000059430.8|actin, gamma 2, smooth muscle, enteric
mm10_v2_chr2_+_172393900_172393964	1.65987	Zkscan1	ENSMUST00000109136.2|Cass4|ENSMUSG00000074570.7|Cas scaffolding protein family member 4
mm10_v2_chr15_-_34356421_34356421	1.58351	Zkscan1	ENSMUST00000179647.1|9430069I07Rik|ENSMUSG00000094447.1|RIKEN cDNA 9430069I07 gene
mm10_v2_chr11_+_31832660_31832716	1.5718	Zkscan1	ENSMUST00000132857.1|Gm12107|ENSMUSG00000086335.1|predicted gene 12107
mm10_v2_chr7_+_29134854_29134957	1.51675	Zkscan1	ENSMUST00000161522.1|Rasgrp4|ENSMUSG00000030589.9|RAS guanyl releasing protein 4 	ENSMUST00000159975.1|Rasgrp4|ENSMUSG00000030589.9|RAS guanyl releasing protein 4 	ENSMUST00000032811.5|Rasgrp4|ENSMUSG00000030589.9|RAS guanyl releasing protein 4 	ENSMUST00000094617.4|Rasgrp4|ENSMUSG00000030589.9|RAS guanyl releasing protein 4
mm10_v2_chr13_+_50417856_50417872	1.50691	Zkscan1	ENSMUST00000046974.4|Fbxw17|ENSMUSG00000037816.4|F-box and WD-40 domain protein 17
mm10_v2_chr4_+_133220810_133220906	1.47028	Zkscan1	ENSMUST00000105910.1|Cd164l2|ENSMUSG00000028865.7|CD164 sialomucin-like 2
mm10_v2_chr12_+_116405397_116405466	1.27924	Zkscan1	ENSMUST00000084828.3|Ncapg2|ENSMUSG00000042029.6|non-SMC condensin II complex, subunit G2
mm10_v2_chr2_-_127729872_127729936	1.26337	Zkscan1	ENSMUST00000028856.2|Mall|ENSMUSG00000027377.2|mal, T cell differentiation protein-like
mm10_v2_chr15_-_79164477_79164496	1.18196	Zkscan1	ENSMUST00000040019.4|Sox10|ENSMUSG00000033006.9|SRY-box containing gene 10
mm10_v2_chr17_+_34039437_34039481	1.17382	Zkscan1	ENSMUST00000131134.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000087497.4|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000114255.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000114252.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2
mm10_v2_chr11_+_104577281_104577387	1.12086	Zkscan1	ENSMUST00000106956.3|Myl4|ENSMUSG00000061086.6|myosin, light polypeptide 4
mm10_v2_chr5_-_134229581_134229625	1.05158	Zkscan1	ENSMUST00000111275.1|Ncf1|ENSMUSG00000015950.7|neutrophil cytosolic factor 1 	ENSMUST00000016094.6|Ncf1|ENSMUSG00000015950.7|neutrophil cytosolic factor 1 	ENSMUST00000144086.1|Ncf1|ENSMUSG00000015950.7|neutrophil cytosolic factor 1
mm10_v2_chr5_-_140321524_140321585	1.04157	Zkscan1	ENSMUST00000031534.6|Mad1l1|ENSMUSG00000029554.9|MAD1 mitotic arrest deficient 1-like 1
mm10_v2_chr10_+_127000709_127000747	1.02556	Zkscan1	ENSMUST00000026500.5|Avil|ENSMUSG00000025432.5|advillin 	ENSMUST00000142698.1|Avil|ENSMUSG00000025432.5|advillin
mm10_v2_chr7_-_98162318_98162367	0.999621	Zkscan1	ENSMUST00000107112.1|Capn5|ENSMUSG00000035547.8|calpain 5
mm10_v2_chr19_+_12798574_12798606	0.982578	Zkscan1	ENSMUST00000025601.6|Lpxn|ENSMUSG00000024696.8|leupaxin
mm10_v2_chr19_+_10937154_10937178	0.94689	Zkscan1	ENSMUST00000037261.3|Gpr44|ENSMUSG00000034117.3|G protein-coupled receptor 44
mm10_v2_chr6_+_47877204_47877204	0.906104	Zkscan1	ENSMUST00000061890.7|Zfp282|ENSMUSG00000025821.9|zinc finger protein 282
mm10_v2_chr7_-_132813715_132813733	0.901746	Zkscan1	ENSMUST00000134946.1|Fam53b|ENSMUSG00000030956.9|family with sequence similarity 53, member B
mm10_v2_chr4_+_103619580_103619665	0.901512	Zkscan1	ENSMUST00000106827.1|Dab1|ENSMUSG00000028519.10|disabled 1
mm10_v2_chr18_+_27598582_27598644	0.858208	Zkscan1	ENSMUST00000050143.3|Gm7729|ENSMUSG00000046636.4|predicted gene 7729
mm10_v2_chr4_+_129960760_129960808	0.792805	Zkscan1	ENSMUST00000139884.1|1700003M07Rik|ENSMUSG00000085389.1|RIKEN cDNA 1700003M07 gene
mm10_v2_chr5_-_131538687_131538717	0.746943	Zkscan1	ENSMUST00000161374.1|Auts2|ENSMUSG00000029673.11|autism susceptibility candidate 2
mm10_v2_chr15_+_101411053_101411103	0.743504	Zkscan1	ENSMUST00000147662.1|Krt7|ENSMUSG00000023039.10|keratin 7
mm10_v2_chr8_+_84949860_84949872	0.710048	Zkscan1	ENSMUST00000121880.1|Rtbdn|ENSMUSG00000048617.10|retbindin
mm10_v2_chr19_+_53310495_53310552	0.682377	Zkscan1	ENSMUST00000003870.7|Mxi1|ENSMUSG00000025025.7|Max interacting protein 1
mm10_v2_chr1_+_50927511_50927543	0.680327	Zkscan1	ENSMUST00000081851.3|Tmeff2|ENSMUSG00000026109.8|transmembrane protein with EGF-like and two follistatin-like domains 2
mm10_v2_chr9_+_119052770_119052802	0.660316	Zkscan1	ENSMUST00000051386.6|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000074734.6|Vill|ENSMUSG00000038775.8|villin-like
mm10_v2_chr11_-_47379405_47379522	0.659243	Zkscan1	ENSMUST00000077221.5|Sgcd|ENSMUSG00000020354.9|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm10_v2_chr4_-_63495951_63496033	0.656419	Zkscan1	ENSMUST00000063650.3|Whrn|ENSMUSG00000039137.12|whirlin 	ENSMUST00000102867.1|Whrn|ENSMUSG00000039137.12|whirlin 	ENSMUST00000107393.1|Whrn|ENSMUSG00000039137.12|whirlin 	ENSMUST00000084510.1|Whrn|ENSMUSG00000039137.12|whirlin 	ENSMUST00000095038.1|Whrn|ENSMUSG00000039137.12|whirlin 	ENSMUST00000119294.1|Whrn|ENSMUSG00000039137.12|whirlin 	ENSMUST00000095037.1|Whrn|ENSMUSG00000039137.12|whirlin 	ENSMUST00000063672.3|Whrn|ENSMUSG00000039137.12|whirlin
mm10_v2_chr6_-_145047725_145047853	0.637889	Zkscan1	ENSMUST00000123930.1|Bcat1|ENSMUSG00000030268.11|branched chain aminotransferase 1, cytosolic
mm10_v2_chr6_-_122340525_122340561	0.62268	Zkscan1	ENSMUST00000112600.2|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr12_-_76818374_76818395	0.602078	Zkscan1	ENSMUST00000118604.1|Rab15|ENSMUSG00000021062.9|RAB15, member RAS oncogene family
mm10_v2_chr6_-_99726392_99726414	0.599883	Zkscan1	ENSMUST00000032152.8|Prok2|ENSMUSG00000030069.9|prokineticin 2 	ENSMUST00000101120.4|Prok2|ENSMUSG00000030069.9|prokineticin 2 	ENSMUST00000008273.6|Prok2|ENSMUSG00000030069.9|prokineticin 2
mm10_v2_chrX_+_164373363_164373378	0.588385	Zkscan1	ENSMUST00000033751.7|Figf|ENSMUSG00000031380.10|c-fos induced growth factor
mm10_v2_chr9_+_119052863_119052893	0.588385	Zkscan1	ENSMUST00000131647.1|Vill|ENSMUSG00000038775.8|villin-like
mm10_v2_chr17_+_24886643_24886765	0.579826	Zkscan1	ENSMUST00000117890.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000168265.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000120943.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000068508.6|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000119829.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3
mm10_v2_chr18_-_6490808_6490869	0.558918	Zkscan1	ENSMUST00000028100.6|Epc1|ENSMUSG00000024240.7|enhancer of polycomb homolog 1 (Drosophila) 	ENSMUST00000050542.5|Epc1|ENSMUSG00000024240.7|enhancer of polycomb homolog 1 (Drosophila)
mm10_v2_chr19_+_10525244_10525305	0.535598	Zkscan1	ENSMUST00000038379.3|Cpsf7|ENSMUSG00000034820.3|cleavage and polyadenylation specific factor 7
mm10_v2_chr17_+_75005523_75005568	0.485544	Zkscan1	ENSMUST00000001927.5|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr4_+_45890303_45890340	0.476679	Zkscan1	ENSMUST00000178561.1|E230008N13Rik|ENSMUSG00000035539.7|RIKEN cDNA E230008N13 gene
mm10_v2_chr6_-_122340499_122340510	0.457069	Zkscan1	ENSMUST00000160843.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr1_+_171840607_171840641	0.445118	Zkscan1	ENSMUST00000136479.1|Cd84|ENSMUSG00000038147.7|CD84 antigen 	ENSMUST00000042302.6|Cd84|ENSMUSG00000038147.7|CD84 antigen
mm10_v2_chr18_-_52529847_52529890	0.440371	Zkscan1	ENSMUST00000171470.1|Lox|ENSMUSG00000024529.7|lysyl oxidase
mm10_v2_chr16_+_17489600_17489627	0.439573	Zkscan1	ENSMUST00000115685.1|Aifm3|ENSMUSG00000022763.10|apoptosis-inducing factor, mitochondrion-associated 3
mm10_v2_chr2_-_105399286_105399319	0.438608	Zkscan1	ENSMUST00000006128.6|Rcn1|ENSMUSG00000005973.6|reticulocalbin 1
mm10_v2_chr2_+_172393794_172393829	0.437834	Zkscan1	ENSMUST00000099061.2|Cass4|ENSMUSG00000074570.7|Cas scaffolding protein family member 4 	ENSMUST00000103073.2|Cass4|ENSMUSG00000074570.7|Cas scaffolding protein family member 4
mm10_v2_chr6_-_145047636_145047661	0.415906	Zkscan1	ENSMUST00000149769.1|Bcat1|ENSMUSG00000030268.11|branched chain aminotransferase 1, cytosolic
mm10_v2_chr2_+_90677208_90677236	0.410695	Zkscan1	ENSMUST00000057481.6|Nup160|ENSMUSG00000051329.7|nucleoporin 160
mm10_v2_chr12_+_53248677_53248677	0.406474	Zkscan1	ENSMUST00000101432.2|Npas3|ENSMUSG00000021010.7|neuronal PAS domain protein 3
mm10_v2_chr9_+_106368594_106368640	0.399859	Zkscan1	ENSMUST00000172306.2|Dusp7|ENSMUSG00000053716.7|dual specificity phosphatase 7
mm10_v2_chr7_-_118491912_118491975	0.39422	Zkscan1	ENSMUST00000178344.1|Itpripl2|ENSMUSG00000095115.1|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm10_v2_chr7_+_144896523_144896539	0.378823	Zkscan1	ENSMUST00000033389.5|Fgf15|ENSMUSG00000031073.5|fibroblast growth factor 15
mm10_v2_chr10_-_39122277_39122314	0.352668	Zkscan1	ENSMUST00000136546.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chr4_+_109406623_109406763	0.346908	Zkscan1	ENSMUST00000124209.1|Ttc39a|ENSMUSG00000028555.9|tetratricopeptide repeat domain 39A
mm10_v2_chr16_+_17489639_17489683	0.339742	Zkscan1	ENSMUST00000023448.6|Aifm3|ENSMUSG00000022763.10|apoptosis-inducing factor, mitochondrion-associated 3
mm10_v2_chr8_-_70527945_70527982	0.337976	Zkscan1	ENSMUST00000138260.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1 	ENSMUST00000117580.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1
mm10_v2_chr11_+_78826575_78826618	0.321598	Zkscan1	ENSMUST00000147875.2|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9 	ENSMUST00000141321.1|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9
mm10_v2_chr11_-_61453992_61454106	0.320033	Zkscan1	ENSMUST00000060255.7|Rnf112|ENSMUSG00000010086.11|ring finger protein 112 	ENSMUST00000054927.7|Rnf112|ENSMUSG00000010086.11|ring finger protein 112 	ENSMUST00000102661.3|Rnf112|ENSMUSG00000010086.11|ring finger protein 112
mm10_v2_chr5_-_8367982_8368107	0.315945	Zkscan1	ENSMUST00000088761.4|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115386.1|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000050166.7|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000046838.7|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115388.2|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000088744.5|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115385.1|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22
mm10_v2_chr18_+_61105844_61105890	0.301306	Zkscan1	ENSMUST00000115268.3|Csf1r|ENSMUSG00000024621.9|colony stimulating factor 1 receptor
mm10_v2_chr4_+_42922253_42922268	0.295565	Zkscan1	ENSMUST00000139100.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178
mm10_v2_chr4_+_141444654_141444714	0.289795	Zkscan1	ENSMUST00000006377.6|Zbtb17|ENSMUSG00000006215.6|zinc finger and BTB domain containing 17
mm10_v2_chr15_+_85017138_85017141	0.286234	Zkscan1	ENSMUST00000023070.5|Upk3a|ENSMUSG00000022435.5|uroplakin 3A
mm10_v2_chr1_+_171840557_171840570	0.273512	Zkscan1	ENSMUST00000135386.1|Cd84|ENSMUSG00000038147.7|CD84 antigen
mm10_v2_chr2_+_172472512_172472535	0.255466	Zkscan1	ENSMUST00000029007.2|Fam209|ENSMUSG00000027505.2|family with sequence similarity 209
mm10_v2_chr5_+_31116722_31116734	0.243275	Zkscan1	ENSMUST00000114637.1|Trim54|ENSMUSG00000062077.8|tripartite motif-containing 54
mm10_v2_chr5_+_31116702_31116713	0.233434	Zkscan1	ENSMUST00000013771.8|Trim54|ENSMUSG00000062077.8|tripartite motif-containing 54
mm10_v2_chr19_+_43689672_43689695	0.225352	Zkscan1	ENSMUST00000081079.5|Entpd7|ENSMUSG00000025192.7|ectonucleoside triphosphate diphosphohydrolase 7
mm10_v2_chr11_+_69981127_69981214	0.225046	Zkscan1	ENSMUST00000108593.1|Ctdnep1|ENSMUSG00000018559.10|CTD nuclear envelope phosphatase 1
mm10_v2_chr15_+_16778101_16778101	0.22302	Zkscan1	ENSMUST00000026432.6|Cdh9|ENSMUSG00000025370.6|cadherin 9
mm10_v2_chr11_-_69981242_69981264	0.217698	Zkscan1	ENSMUST00000108594.1|Elp5|ENSMUSG00000018565.11|elongator acetyltransferase complex subunit 5
mm10_v2_chr4_-_116144609_116144626	0.212013	Zkscan1	ENSMUST00000030469.4|Lurap1|ENSMUSG00000028701.4|leucine rich adaptor protein 1
mm10_v2_chr11_-_78512105_78512172	0.207545	Zkscan1	ENSMUST00000052566.7|Tmem199|ENSMUSG00000051232.7|transmembrane protein 199
mm10_v2_chr3_-_88378699_88378753	0.193638	Zkscan1	ENSMUST00000098956.2|Bglap2|ENSMUSG00000074486.2|bone gamma-carboxyglutamate protein 2
mm10_v2_chr8_-_70527645_70527783	0.178041	Zkscan1	ENSMUST00000132867.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1
mm10_v2_chr1_-_93635692_93635722	0.175078	Zkscan1	ENSMUST00000027498.7|Stk25|ENSMUSG00000026277.7|serine/threonine kinase 25 (yeast)
mm10_v2_chr15_+_83779999_83780033	0.165822	Zkscan1	ENSMUST00000046168.5|Mpped1|ENSMUSG00000041708.6|metallophosphoesterase domain containing 1
mm10_v2_chr18_+_31609512_31609512	0.153336	Zkscan1	ENSMUST00000164667.1|B930094E09Rik|ENSMUSG00000092124.1|RIKEN cDNA B930094E09 gene
mm10_v2_chr1_-_93635479_93635632	0.137125	Zkscan1	ENSMUST00000133769.1|Stk25|ENSMUSG00000026277.7|serine/threonine kinase 25 (yeast)
mm10_v2_chr8_+_72646679_72646725	0.136223	Zkscan1	ENSMUST00000161386.1|Nwd1|ENSMUSG00000048148.10|NACHT and WD repeat domain containing 1 	ENSMUST00000093427.4|Nwd1|ENSMUSG00000048148.10|NACHT and WD repeat domain containing 1
mm10_v2_chr8_+_4253067_4253128	0.13502	Zkscan1	ENSMUST00000011981.3|Snapc2|ENSMUSG00000011837.3|small nuclear RNA activating complex, polypeptide 2
mm10_v2_chr16_-_10447340_10447369	0.131931	Zkscan1	ENSMUST00000051118.6|Tvp23a|ENSMUSG00000050908.6|trans-golgi network vesicle protein 23A
mm10_v2_chr2_-_73580288_73580353	0.12169	Zkscan1	ENSMUST00000028515.3|Chrna1|ENSMUSG00000027107.3|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
mm10_v2_chr19_+_5088534_5088575	0.121552	Zkscan1	ENSMUST00000025811.4|Yif1a|ENSMUSG00000024875.4|Yip1 interacting factor homolog A (S. cerevisiae)
mm10_v2_chr12_-_111574384_111574405	0.115221	Zkscan1	ENSMUST00000180698.1|2810029C07Rik|ENSMUSG00000096995.1|RIKEN cDNA 2810029C07 gene
mm10_v2_chrX_+_159372175_159372290	0.115016	Zkscan1	ENSMUST00000087143.6|Eif1ax|ENSMUSG00000067194.6|eukaryotic translation initiation factor 1A, X-linked
mm10_v2_chr7_-_28962265_28962340	0.115003	Zkscan1	ENSMUST00000068045.7|Actn4|ENSMUSG00000054808.7|actinin alpha 4
mm10_v2_chr18_+_14424821_14424868	0.110709	Zkscan1	ENSMUST00000069552.5|Gm5160|ENSMUSG00000055795.5|predicted gene 5160
mm10_v2_chr2_+_118900377_118900397	0.0930558	Zkscan1	ENSMUST00000151162.1|Bahd1|ENSMUSG00000040007.8|bromo adjacent homology domain containing 1
mm10_v2_chr4_+_101419277_101419332	0.0830527	Zkscan1	ENSMUST00000102780.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106946.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106945.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4
mm10_v2_chr14_-_52316323_52316344	0.0469812	Zkscan1	ENSMUST00000135523.1|Sall2|ENSMUSG00000049532.7|sal-like 2 (Drosophila)
mm10_v2_chr9_+_98422961_98422961	0.0440803	Zkscan1	ENSMUST00000052068.9|Rbp1|ENSMUSG00000046402.9|retinol binding protein 1, cellular
mm10_v2_chr7_-_28962223_28962247	0.042966	Zkscan1	ENSMUST00000127210.1|Actn4|ENSMUSG00000054808.7|actinin alpha 4
mm10_v2_chr11_+_120458093_120458147	0.0415404	Zkscan1	ENSMUST00000058370.7|Ccdc137|ENSMUSG00000049957.8|coiled-coil domain containing 137 	ENSMUST00000175970.1|Ccdc137|ENSMUSG00000049957.8|coiled-coil domain containing 137 	ENSMUST00000176120.1|Ccdc137|ENSMUSG00000049957.8|coiled-coil domain containing 137
mm10_v2_chr3_+_89136133_89136183	0.0406575	Zkscan1	ENSMUST00000047111.6|Pklr|ENSMUSG00000041237.6|pyruvate kinase liver and red blood cell
mm10_v2_chr4_-_47057296_47057356	0.0325307	Zkscan1	ENSMUST00000107747.1|Anks6|ENSMUSG00000066191.5|ankyrin repeat and sterile alpha motif domain containing 6 	ENSMUST00000084616.2|Anks6|ENSMUSG00000066191.5|ankyrin repeat and sterile alpha motif domain containing 6
mm10_v2_chr4_-_133277730_133277804	0.0265145	Zkscan1	ENSMUST00000105907.2|Tmem222|ENSMUSG00000028857.10|transmembrane protein 222
mm10_v2_chr4_-_97584612_97584643	0.0263542	Zkscan1	ENSMUST00000107068.2|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr10_-_79555077_79555199	0.0216257	Zkscan1	ENSMUST00000170018.1|Mier2|ENSMUSG00000042570.8|mesoderm induction early response 1, family member 2 	ENSMUST00000062855.8|Mier2|ENSMUSG00000042570.8|mesoderm induction early response 1, family member 2 	ENSMUST00000165778.1|Mier2|ENSMUSG00000042570.8|mesoderm induction early response 1, family member 2 	ENSMUST00000165028.1|Mier2|ENSMUSG00000042570.8|mesoderm induction early response 1, family member 2
mm10_v2_chr11_+_78512193_78512237	0.017006	Zkscan1	ENSMUST00000001127.4|Poldip2|ENSMUSG00000001100.4|polymerase (DNA-directed), delta interacting protein 2
mm10_v2_chr3_+_96645579_96645608	0.00386167	Zkscan1	ENSMUST00000119365.1|Itga10|ENSMUSG00000090210.1|integrin, alpha 10 	ENSMUST00000029744.5|Itga10|ENSMUSG00000090210.1|integrin, alpha 10
