mm10_v2_chr7_+_24370255_24370312	3.83092	Zic3	ENSMUST00000171904.1|Kcnn4|ENSMUSG00000054342.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm10_v2_chr18_-_78142119_78142154	3.64068	Zic3	ENSMUST00000160639.1|Slc14a1|ENSMUSG00000059336.8|solute carrier family 14 (urea transporter), member 1
mm10_v2_chr12_-_76709997_76710026	3.4135	Zic3	ENSMUST00000166101.1|Sptb|ENSMUSG00000021061.9|spectrin beta, erythrocytic
mm10_v2_chrX_+_73639414_73639436	3.25236	Zic3	ENSMUST00000019701.8|Dusp9|ENSMUSG00000031383.8|dual specificity phosphatase 9
mm10_v2_chr11_+_115899943_115899966	3.17033	Zic3	ENSMUST00000152171.1|Smim5|ENSMUSG00000048442.9|small integral membrane protein 5
mm10_v2_chr11_+_115900125_115900202	2.93925	Zic3	ENSMUST00000142089.1|Smim5|ENSMUSG00000048442.9|small integral membrane protein 5 	ENSMUST00000131566.1|Smim5|ENSMUSG00000048442.9|small integral membrane protein 5
mm10_v2_chr11_+_72999069_72999103	2.63694	Zic3	ENSMUST00000021141.7|P2rx1|ENSMUSG00000020787.8|purinergic receptor P2X, ligand-gated ion channel, 1
mm10_v2_chr7_-_17062384_17062427	2.61202	Zic3	ENSMUST00000153833.1|Hif3a|ENSMUSG00000004328.9|hypoxia inducible factor 3, alpha subunit 	ENSMUST00000108492.2|Hif3a|ENSMUSG00000004328.9|hypoxia inducible factor 3, alpha subunit
mm10_v2_chr2_-_170427828_170427852	2.36056	Zic3	ENSMUST00000013667.2|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1 	ENSMUST00000109152.2|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1 	ENSMUST00000068137.4|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1
mm10_v2_chr8_+_94329192_94329217	2.17198	Zic3	ENSMUST00000034218.3|Slc12a3|ENSMUSG00000031766.3|solute carrier family 12, member 3
mm10_v2_chr13_+_44729535_44729697	2.09755	Zic3	ENSMUST00000174068.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr9_-_103480328_103480348	1.93507	Zic3	ENSMUST00000124310.2|Bfsp2|ENSMUSG00000032556.9|beaded filament structural protein 2, phakinin
mm10_v2_chr5_+_137288273_137288292	1.92355	Zic3	ENSMUST00000024099.4|Ache|ENSMUSG00000023328.8|acetylcholinesterase 	ENSMUST00000085934.3|Ache|ENSMUSG00000023328.8|acetylcholinesterase
mm10_v2_chrX_+_56454871_56454887	1.88616	Zic3	ENSMUST00000039374.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B 	ENSMUST00000101553.2|Ddx26b|ENSMUSG00000035967.9|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
mm10_v2_chr7_+_110773658_110773685	1.84798	Zic3	ENSMUST00000143786.1|Ampd3|ENSMUSG00000005686.10|adenosine monophosphate deaminase 3
mm10_v2_chr9_-_123678873_123678885	1.78858	Zic3	ENSMUST00000040960.6|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A
mm10_v2_chr9_-_123678782_123678850	1.75607	Zic3	ENSMUST00000170591.1|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A 	ENSMUST00000171647.1|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A
mm10_v2_chr10_+_82985473_82985504	1.68119	Zic3	ENSMUST00000040110.7|Chst11|ENSMUSG00000034612.7|carbohydrate sulfotransferase 11
mm10_v2_chr8_-_85365317_85365334	1.64127	Zic3	ENSMUST00000034133.7|Mylk3|ENSMUSG00000031698.8|myosin light chain kinase 3
mm10_v2_chr8_-_85365341_85365353	1.63788	Zic3	ENSMUST00000121972.1|Mylk3|ENSMUSG00000031698.8|myosin light chain kinase 3
mm10_v2_chrX_-_49788204_49788243	1.59487	Zic3	ENSMUST00000114893.1|Igsf1|ENSMUSG00000031111.10|immunoglobulin superfamily, member 1
mm10_v2_chr6_+_87778084_87778136	1.55009	Zic3	ENSMUST00000032133.3|Gp9|ENSMUSG00000030054.3|glycoprotein 9 (platelet)
mm10_v2_chr17_+_25366550_25366550	1.50531	Zic3	ENSMUST00000069616.7|Tpsb2|ENSMUSG00000033825.9|tryptase beta 2
mm10_v2_chr4_-_118620763_118620792	1.50502	Zic3	ENSMUST00000071972.4|Wdr65|ENSMUSG00000028730.8|WD repeat domain 65
mm10_v2_chr6_-_52218686_52218716	1.45949	Zic3	ENSMUST00000134367.2|Hoxa7|ENSMUSG00000038236.6|homeobox A7
mm10_v2_chr5_+_66676098_66676257	1.45062	Zic3	ENSMUST00000031131.9|Uchl1|ENSMUSG00000029223.9|ubiquitin carboxy-terminal hydrolase L1
mm10_v2_chr6_+_90619241_90619255	1.32928	Zic3	ENSMUST00000032177.8|Slc41a3|ENSMUSG00000030089.9|solute carrier family 41, member 3
mm10_v2_chr1_-_133801031_133801041	1.32241	Zic3	ENSMUST00000143567.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr5_-_136883115_136883184	1.31266	Zic3	ENSMUST00000057497.6|Col26a1|ENSMUSG00000004415.9|collagen, type XXVI, alpha 1 	ENSMUST00000111103.1|Col26a1|ENSMUSG00000004415.9|collagen, type XXVI, alpha 1
mm10_v2_chr8_-_18950932_18950975	1.31135	Zic3	ENSMUST00000055503.5|Xkr5|ENSMUSG00000039814.9|X Kell blood group precursor-related family, member 5 	ENSMUST00000095438.3|Xkr5|ENSMUSG00000039814.9|X Kell blood group precursor-related family, member 5
mm10_v2_chr9_-_44454757_44454773	1.25873	Zic3	ENSMUST00000047740.2|Upk2|ENSMUSG00000041523.2|uroplakin 2
mm10_v2_chr7_+_96211656_96211680	1.23318	Zic3	ENSMUST00000107165.1|Tenm4|ENSMUSG00000048078.10|teneurin transmembrane protein 4
mm10_v2_chr12_+_81631369_81631394	1.23152	Zic3	ENSMUST00000036116.5|Ttc9|ENSMUSG00000042734.5|tetratricopeptide repeat domain 9
mm10_v2_chr7_+_78914216_78914294	1.20094	Zic3	ENSMUST00000120331.2|Isg20|ENSMUSG00000039236.12|interferon-stimulated protein
mm10_v2_chr2_-_92371039_92371062	1.19405	Zic3	ENSMUST00000068586.6|Gyltl1b|ENSMUSG00000040434.10|glycosyltransferase-like 1B
mm10_v2_chr2_-_151009364_151009398	1.19329	Zic3	ENSMUST00000109896.1|Ninl|ENSMUSG00000068115.7|ninein-like
mm10_v2_chr4_+_141010644_141010696	1.14158	Zic3	ENSMUST00000071977.8|Mfap2|ENSMUSG00000060572.11|microfibrillar-associated protein 2
mm10_v2_chr7_-_110982443_110982468	1.12196	Zic3	ENSMUST00000005751.6|Mrvi1|ENSMUSG00000005611.9|MRV integration site 1
mm10_v2_chr5_-_107726017_107726040	1.11208	Zic3	ENSMUST00000159263.2|Gfi1|ENSMUSG00000029275.11|growth factor independent 1
mm10_v2_chr4_+_52439235_52439287	1.0982	Zic3	ENSMUST00000117280.1|Smc2|ENSMUSG00000028312.13|structural maintenance of chromosomes 2 	ENSMUST00000102915.3|Smc2|ENSMUSG00000028312.13|structural maintenance of chromosomes 2 	ENSMUST00000142227.1|Smc2|ENSMUSG00000028312.13|structural maintenance of chromosomes 2
mm10_v2_chr7_+_30787897_30787912	1.08989	Zic3	ENSMUST00000098559.1|Krtdap|ENSMUSG00000074199.1|keratinocyte differentiation associated protein
mm10_v2_chr18_-_62179948_62179986	1.0849	Zic3	ENSMUST00000053640.3|Adrb2|ENSMUSG00000045730.3|adrenergic receptor, beta 2
mm10_v2_chr8_-_25101734_25101792	1.07741	Zic3	ENSMUST00000098866.4|Plekha2|ENSMUSG00000031557.9|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
mm10_v2_chr13_-_47105790_47105875	1.07475	Zic3	ENSMUST00000129352.1|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding)
mm10_v2_chr10_-_128401218_128401234	1.04992	Zic3	ENSMUST00000042666.5|Slc39a5|ENSMUSG00000039878.6|solute carrier family 39 (metal ion transporter), member 5
mm10_v2_chr9_-_110645328_110645368	1.04984	Zic3	ENSMUST00000149089.1|Nbeal2|ENSMUSG00000056724.8|neurobeachin-like 2
mm10_v2_chr5_-_138170992_138171033	1.04586	Zic3	ENSMUST00000139983.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr2_-_92370999_92371036	1.0453	Zic3	ENSMUST00000176810.1|Gyltl1b|ENSMUSG00000040434.10|glycosyltransferase-like 1B 	ENSMUST00000090582.4|Gyltl1b|ENSMUSG00000040434.10|glycosyltransferase-like 1B
mm10_v2_chr3_+_19644452_19644466	1.03976	Zic3	ENSMUST00000029139.7|Trim55|ENSMUSG00000060913.5|tripartite motif-containing 55
mm10_v2_chr17_-_68004075_68004140	1.01114	Zic3	ENSMUST00000024840.5|Arhgap28|ENSMUSG00000024043.7|Rho GTPase activating protein 28
mm10_v2_chrX_+_37048807_37048845	1.01002	Zic3	ENSMUST00000060057.1|Sowahd|ENSMUSG00000044400.1|sosondowah ankyrin repeat domain family member D
mm10_v2_chr6_-_86669136_86669164	1.00305	Zic3	ENSMUST00000001184.7|Mxd1|ENSMUSG00000001156.7|MAX dimerization protein 1
mm10_v2_chrX_+_72987339_72987366	0.997962	Zic3	ENSMUST00000164800.1|Zfp185|ENSMUSG00000031351.9|zinc finger protein 185 	ENSMUST00000114546.2|Zfp185|ENSMUSG00000031351.9|zinc finger protein 185
mm10_v2_chr4_-_136956784_136956871	0.990754	Zic3	ENSMUST00000030420.8|Epha8|ENSMUSG00000028661.8|Eph receptor A8
mm10_v2_chr3_-_100489324_100489354	0.985849	Zic3	ENSMUST00000061455.8|Fam46c|ENSMUSG00000044468.8|family with sequence similarity 46, member C
mm10_v2_chr1_+_75507077_75507184	0.974257	Zic3	ENSMUST00000037330.4|Inha|ENSMUSG00000032968.4|inhibin alpha
mm10_v2_chr17_-_71310952_71310969	0.956915	Zic3	ENSMUST00000024849.9|Emilin2|ENSMUSG00000024053.10|elastin microfibril interfacer 2
mm10_v2_chr14_-_73325773_73325836	0.955884	Zic3	ENSMUST00000022701.6|Rb1|ENSMUSG00000022105.6|retinoblastoma 1
mm10_v2_chr11_+_87760533_87760587	0.954642	Zic3	ENSMUST00000039627.5|Bzrap1|ENSMUSG00000034156.10|benzodiazepine receptor associated protein 1 	ENSMUST00000100644.3|Bzrap1|ENSMUSG00000034156.10|benzodiazepine receptor associated protein 1
mm10_v2_chr1_+_91366412_91366433	0.953627	Zic3	ENSMUST00000086861.5|Fam132b|ENSMUSG00000047443.8|family with sequence similarity 132, member B
mm10_v2_chr9_-_32344237_32344255	0.949264	Zic3	ENSMUST00000034533.5|Kcnj5|ENSMUSG00000032034.5|potassium inwardly-rectifying channel, subfamily J, member 5
mm10_v2_chr9_-_44251464_44251491	0.915472	Zic3	ENSMUST00000034618.4|Pdzd3|ENSMUSG00000032105.4|PDZ domain containing 3
mm10_v2_chr2_-_92370968_92370992	0.914914	Zic3	ENSMUST00000176774.1|Gyltl1b|ENSMUSG00000040434.10|glycosyltransferase-like 1B
mm10_v2_chr14_+_25607797_25607838	0.910336	Zic3	ENSMUST00000160229.1|Zmiz1|ENSMUSG00000007817.8|zinc finger, MIZ-type containing 1
mm10_v2_chr12_+_83763628_83763648	0.909056	Zic3	ENSMUST00000121733.1|Papln|ENSMUSG00000021223.7|papilin, proteoglycan-like sulfated glycoprotein
mm10_v2_chr12_+_83763654_83763671	0.905393	Zic3	ENSMUST00000021646.5|Papln|ENSMUSG00000021223.7|papilin, proteoglycan-like sulfated glycoprotein
mm10_v2_chr7_+_43427622_43427652	0.902531	Zic3	ENSMUST00000177164.2|Lim2|ENSMUSG00000097437.2|lens intrinsic membrane protein 2
mm10_v2_chr19_-_5726240_5726317	0.898198	Zic3	ENSMUST00000049295.8|Ehbp1l1|ENSMUSG00000024937.8|EH domain binding protein 1-like 1 	ENSMUST00000075606.4|Ehbp1l1|ENSMUSG00000024937.8|EH domain binding protein 1-like 1
mm10_v2_chr15_-_58324161_58324178	0.876291	Zic3	ENSMUST00000022985.1|Klhl38|ENSMUSG00000022357.2|kelch-like 38
mm10_v2_chr11_+_67078293_67078307	0.870254	Zic3	ENSMUST00000108689.1|Myh3|ENSMUSG00000020908.8|myosin, heavy polypeptide 3, skeletal muscle, embryonic 	ENSMUST00000165221.1|Myh3|ENSMUSG00000020908.8|myosin, heavy polypeptide 3, skeletal muscle, embryonic 	ENSMUST00000007301.7|Myh3|ENSMUSG00000020908.8|myosin, heavy polypeptide 3, skeletal muscle, embryonic
mm10_v2_chr19_-_4615453_4615512	0.867034	Zic3	ENSMUST00000053597.2|Lrfn4|ENSMUSG00000045045.7|leucine rich repeat and fibronectin type III domain containing 4
mm10_v2_chr11_-_109472611_109472688	0.866405	Zic3	ENSMUST00000168740.1|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr2_+_103424820_103424829	0.866391	Zic3	ENSMUST00000126290.1|Elf5|ENSMUSG00000027186.8|E74-like factor 5
mm10_v2_chr17_+_86963279_86963303	0.864443	Zic3	ENSMUST00000139344.1|Rhoq|ENSMUSG00000024143.8|ras homolog gene family, member Q
mm10_v2_chr11_+_53519871_53519917	0.863792	Zic3	ENSMUST00000120878.2|Sept8|ENSMUSG00000018398.12|septin 8
mm10_v2_chr3_-_53657339_53657391	0.858059	Zic3	ENSMUST00000091137.4|Frem2|ENSMUSG00000037016.7|Fras1 related extracellular matrix protein 2
mm10_v2_chr14_+_54476100_54476252	0.851914	Zic3	ENSMUST00000164766.1|Rem2|ENSMUSG00000022176.5|rad and gem related GTP binding protein 2 	ENSMUST00000164697.1|Rem2|ENSMUSG00000022176.5|rad and gem related GTP binding protein 2
mm10_v2_chr2_+_120629113_120629224	0.850981	Zic3	ENSMUST00000150912.1|Stard9|ENSMUSG00000033705.10|START domain containing 9 	ENSMUST00000180041.1|Stard9|ENSMUSG00000033705.10|START domain containing 9
mm10_v2_chr11_-_118103492_118103492	0.844143	Zic3	ENSMUST00000132685.1|Dnah17|ENSMUSG00000033987.9|dynein, axonemal, heavy chain 17
mm10_v2_chr8_-_122460666_122460695	0.841654	Zic3	ENSMUST00000006762.5|Snai3|ENSMUSG00000006587.5|snail homolog 3 (Drosophila)
mm10_v2_chr11_+_53519920_53519933	0.839478	Zic3	ENSMUST00000147912.1|Sept8|ENSMUSG00000018398.12|septin 8
mm10_v2_chr8_+_70501116_70501172	0.831765	Zic3	ENSMUST00000127983.1|Crlf1|ENSMUSG00000007888.9|cytokine receptor-like factor 1
mm10_v2_chr9_-_53975246_53975348	0.826118	Zic3	ENSMUST00000048409.7|Elmod1|ENSMUSG00000041986.9|ELMO/CED-12 domain containing 1
mm10_v2_chr11_+_3332426_3332460	0.824869	Zic3	ENSMUST00000136474.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr8_+_93810832_93810843	0.812135	Zic3	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr1_-_119053339_119053370	0.811703	Zic3	ENSMUST00000161301.1|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2 	ENSMUST00000161451.1|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2 	ENSMUST00000162607.1|Gli2|ENSMUSG00000048402.8|GLI-Kruppel family member GLI2
mm10_v2_chr16_+_37011758_37011791	0.799575	Zic3	ENSMUST00000071452.5|Polq|ENSMUSG00000034206.9|polymerase (DNA directed), theta 	ENSMUST00000054034.6|Polq|ENSMUSG00000034206.9|polymerase (DNA directed), theta
mm10_v2_chr16_-_91011029_91011069	0.799379	Zic3	ENSMUST00000130813.1|Synj1|ENSMUSG00000022973.11|synaptojanin 1
mm10_v2_chr6_-_87981482_87981622	0.792313	Zic3	ENSMUST00000056403.5|H1fx|ENSMUSG00000044927.5|H1 histone family, member X
mm10_v2_chr7_-_126704736_126704762	0.791347	Zic3	ENSMUST00000131415.1|Coro1a|ENSMUSG00000030707.9|coronin, actin binding protein 1A
mm10_v2_chr5_+_137758133_137758213	0.788234	Zic3	ENSMUST00000141733.1|Tsc22d4|ENSMUSG00000029723.10|TSC22 domain family, member 4 	ENSMUST00000110985.1|Tsc22d4|ENSMUSG00000029723.10|TSC22 domain family, member 4
mm10_v2_chr10_-_81378459_81378516	0.787835	Zic3	ENSMUST00000140901.1|Fzr1|ENSMUSG00000020235.10|fizzy/cell division cycle 20 related 1 (Drosophila)
mm10_v2_chr2_+_91035613_91035641	0.787241	Zic3	ENSMUST00000111445.3|Rapsn|ENSMUSG00000002104.5|receptor-associated protein of the synapse 	ENSMUST00000111446.3|Rapsn|ENSMUSG00000002104.5|receptor-associated protein of the synapse 	ENSMUST00000050323.5|Rapsn|ENSMUSG00000002104.5|receptor-associated protein of the synapse
mm10_v2_chr7_+_130865835_130865942	0.78113	Zic3	ENSMUST00000075181.4|Plekha1|ENSMUSG00000040268.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 	ENSMUST00000048180.5|Plekha1|ENSMUSG00000040268.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
mm10_v2_chr12_+_3806513_3806527	0.778081	Zic3	ENSMUST00000172719.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr7_-_126704816_126704854	0.776408	Zic3	ENSMUST00000032949.7|Coro1a|ENSMUSG00000030707.9|coronin, actin binding protein 1A
mm10_v2_chr6_+_86404336_86404473	0.776366	Zic3	ENSMUST00000113713.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000113708.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr17_+_35135463_35135539	0.774849	Zic3	ENSMUST00000173535.1|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6 	ENSMUST00000173952.1|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6
mm10_v2_chr2_+_29889720_29889753	0.774342	Zic3	ENSMUST00000113767.1|Odf2|ENSMUSG00000026790.13|outer dense fiber of sperm tails 2
mm10_v2_chr15_-_94404258_94404327	0.772111	Zic3	ENSMUST00000035342.4|Adamts20|ENSMUSG00000022449.8|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20 	ENSMUST00000155907.1|Adamts20|ENSMUSG00000022449.8|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20
mm10_v2_chr11_+_72042455_72042481	0.767311	Zic3	ENSMUST00000021164.3|Fam64a|ENSMUSG00000020808.3|family with sequence similarity 64, member A
mm10_v2_chr15_-_101924725_101924742	0.765085	Zic3	ENSMUST00000023797.6|Krt4|ENSMUSG00000059668.5|keratin 4
mm10_v2_chr5_-_52566264_52566312	0.764984	Zic3	ENSMUST00000039750.5|Lgi2|ENSMUSG00000039252.7|leucine-rich repeat LGI family, member 2
mm10_v2_chr5_-_138171248_138171274	0.763219	Zic3	ENSMUST00000153867.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr6_-_122609964_122610087	0.762333	Zic3	ENSMUST00000032211.4|Gdf3|ENSMUSG00000030117.4|growth differentiation factor 3
mm10_v2_chr6_-_56362356_56362519	0.761525	Zic3	ENSMUST00000044505.7|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000166102.1|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000164037.1|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C 	ENSMUST00000114327.2|Pde1c|ENSMUSG00000004347.10|phosphodiesterase 1C
mm10_v2_chr18_-_35662180_35662195	0.759682	Zic3	ENSMUST00000025209.4|Spata24|ENSMUSG00000024352.5|spermatogenesis associated 24 	ENSMUST00000096573.2|Spata24|ENSMUSG00000024352.5|spermatogenesis associated 24
mm10_v2_chr5_-_136170634_136170661	0.748684	Zic3	ENSMUST00000041048.1|Orai2|ENSMUSG00000039747.7|ORAI calcium release-activated calcium modulator 2
mm10_v2_chr6_+_86404257_86404319	0.734084	Zic3	ENSMUST00000095752.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000130967.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr14_+_54632329_54632329	0.731021	Zic3	ENSMUST00000173083.1|Gm20726|ENSMUSG00000092443.1|predicted gene, 20726
mm10_v2_chr16_-_18629864_18629951	0.7287	Zic3	ENSMUST00000096987.5|Sept5|ENSMUSG00000072214.6|septin 5
mm10_v2_chr5_-_137212389_137212389	0.722784	Zic3	ENSMUST00000179412.1|A630081J09Rik|ENSMUSG00000094840.1|RIKEN cDNA A630081J09 gene
mm10_v2_chr6_+_52714219_52714440	0.721036	Zic3	ENSMUST00000138040.1|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1 	ENSMUST00000129660.1|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1
mm10_v2_chr19_+_7268296_7268313	0.719039	Zic3	ENSMUST00000066646.4|Rcor2|ENSMUSG00000024968.7|REST corepressor 2
mm10_v2_chr14_+_121035194_121035208	0.716709	Zic3	ENSMUST00000135010.1|Farp1|ENSMUSG00000025555.8|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm10_v2_chr5_-_138171216_138171246	0.715758	Zic3	ENSMUST00000147920.1|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr15_-_95528702_95528777	0.714671	Zic3	ENSMUST00000166170.1|Nell2|ENSMUSG00000022454.10|NEL-like 2
mm10_v2_chr19_-_5273080_5273129	0.711328	Zic3	ENSMUST00000025786.7|Pacs1|ENSMUSG00000024855.9|phosphofurin acidic cluster sorting protein 1
mm10_v2_chr11_-_106788845_106788883	0.705817	Zic3	ENSMUST00000123339.1|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr4_-_136835843_136835988	0.704304	Zic3	ENSMUST00000105846.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000059287.7|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000105845.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2
mm10_v2_chr2_+_29890063_29890081	0.701027	Zic3	ENSMUST00000028128.6|Odf2|ENSMUSG00000026790.13|outer dense fiber of sperm tails 2
mm10_v2_chr15_-_83149270_83149304	0.696902	Zic3	ENSMUST00000129372.1|Poldip3|ENSMUSG00000041815.7|polymerase (DNA-directed), delta interacting protein 3
mm10_v2_chr2_-_54085542_54085559	0.696333	Zic3	ENSMUST00000100089.2|Rprm|ENSMUSG00000075334.2|reprimo, TP53 dependent G2 arrest mediator candidate
mm10_v2_chr12_-_27342696_27342726	0.692817	Zic3	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr11_-_120990871_120991037	0.68826	Zic3	ENSMUST00000154483.1|Csnk1d|ENSMUSG00000025162.11|casein kinase 1, delta
mm10_v2_chr14_-_70524068_70524084	0.68749	Zic3	ENSMUST00000022692.3|Sftpc|ENSMUSG00000022097.3|surfactant associated protein C
mm10_v2_chr5_+_5573952_5574013	0.682877	Zic3	ENSMUST00000101627.2|Gm8773|ENSMUSG00000073234.2|predicted gene 8773
mm10_v2_chrX_+_71050160_71050256	0.681833	Zic3	ENSMUST00000082088.3|Mamld1|ENSMUSG00000059401.7|mastermind-like domain containing 1 	ENSMUST00000114629.3|Mamld1|ENSMUSG00000059401.7|mastermind-like domain containing 1
mm10_v2_chr17_-_45549655_45549677	0.665145	Zic3	ENSMUST00000180252.1|Tmem151b|ENSMUSG00000096847.1|transmembrane protein 151B
mm10_v2_chr4_-_115133977_115134084	0.660712	Zic3	ENSMUST00000051400.7|Cyp4x1|ENSMUSG00000047155.7|cytochrome P450, family 4, subfamily x, polypeptide 1
mm10_v2_chr13_+_44730726_44730838	0.658968	Zic3	ENSMUST00000173704.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2 	ENSMUST00000044608.7|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2 	ENSMUST00000173367.1|Jarid2|ENSMUSG00000038518.9|jumonji, AT rich interactive domain 2
mm10_v2_chr2_+_84840612_84840640	0.647418	Zic3	ENSMUST00000111625.1|Slc43a1|ENSMUSG00000027075.10|solute carrier family 43, member 1
mm10_v2_chr8_+_123332676_123332740	0.641456	Zic3	ENSMUST00000010298.6|Spire2|ENSMUSG00000010154.6|spire homolog 2 (Drosophila)
mm10_v2_chrX_+_140956892_140956923	0.625842	Zic3	ENSMUST00000112971.1|Atg4a|ENSMUSG00000079418.3|autophagy related 4A, cysteine peptidase
mm10_v2_chr2_+_18998332_18998378	0.61954	Zic3	ENSMUST00000028069.1|4930426L09Rik|ENSMUSG00000026736.1|RIKEN cDNA 4930426L09 gene
mm10_v2_chr2_+_125152505_125152606	0.616709	Zic3	ENSMUST00000110494.2|Slc12a1|ENSMUSG00000027202.6|solute carrier family 12, member 1 	ENSMUST00000028630.2|Slc12a1|ENSMUSG00000027202.6|solute carrier family 12, member 1 	ENSMUST00000110495.2|Slc12a1|ENSMUSG00000027202.6|solute carrier family 12, member 1
mm10_v2_chr9_-_44721383_44721484	0.608981	Zic3	ENSMUST00000148929.1|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1 	ENSMUST00000123406.1|Phldb1|ENSMUSG00000048537.9|pleckstrin homology-like domain, family B, member 1
mm10_v2_chr4_-_106492283_106492340	0.601667	Zic3	ENSMUST00000054472.3|Bsnd|ENSMUSG00000025418.7|Bartter syndrome, infantile, with sensorineural deafness (Barttin)
mm10_v2_chr6_+_86404219_86404240	0.601249	Zic3	ENSMUST00000095754.3|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000095753.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr13_+_6548154_6548174	0.595128	Zic3	ENSMUST00000021611.8|Pitrm1|ENSMUSG00000021193.9|pitrilysin metallepetidase 1
mm10_v2_chr15_-_95528228_95528266	0.594862	Zic3	ENSMUST00000075275.2|Nell2|ENSMUSG00000022454.10|NEL-like 2
mm10_v2_chr16_-_89960815_89960828	0.590322	Zic3	ENSMUST00000002588.3|Tiam1|ENSMUSG00000002489.9|T cell lymphoma invasion and metastasis 1
mm10_v2_chr16_-_91044473_91044543	0.589294	Zic3	ENSMUST00000118522.1|Paxbp1|ENSMUSG00000022974.6|PAX3 and PAX7 binding protein 1
mm10_v2_chr1_+_129273344_129273470	0.585895	Zic3	ENSMUST00000073527.6|Thsd7b|ENSMUSG00000042581.8|thrombospondin, type I, domain containing 7B 	ENSMUST00000040311.7|Thsd7b|ENSMUSG00000042581.8|thrombospondin, type I, domain containing 7B
mm10_v2_chr11_-_109473220_109473294	0.580016	Zic3	ENSMUST00000070872.6|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr2_+_156840966_156841017	0.576366	Zic3	ENSMUST00000109564.1|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2
mm10_v2_chr11_+_102604370_102604435	0.569959	Zic3	ENSMUST00000057893.5|Fzd2|ENSMUSG00000050288.5|frizzled homolog 2 (Drosophila)
mm10_v2_chr4_+_127172866_127172898	0.555454	Zic3	ENSMUST00000106094.2|Dlgap3|ENSMUSG00000042388.8|discs, large (Drosophila) homolog-associated protein 3
mm10_v2_chr8_-_25101985_25102194	0.552279	Zic3	ENSMUST00000128715.1|Plekha2|ENSMUSG00000031557.9|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 	ENSMUST00000064883.6|Plekha2|ENSMUSG00000031557.9|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2
mm10_v2_chr9_-_77544870_77544914	0.551996	Zic3	ENSMUST00000183873.1|Lrrc1|ENSMUSG00000032352.9|leucine rich repeat containing 1
mm10_v2_chr14_-_37098211_37098311	0.551909	Zic3	ENSMUST00000022337.9|Cdhr1|ENSMUSG00000021803.9|cadherin-related family member 1
mm10_v2_chr4_-_16013796_16013830	0.551197	Zic3	ENSMUST00000149891.1|Osgin2|ENSMUSG00000041153.3|oxidative stress induced growth inhibitor family member 2
mm10_v2_chr9_+_119063429_119063467	0.550418	Zic3	ENSMUST00000141185.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000126251.1|Vill|ENSMUSG00000038775.8|villin-like 	ENSMUST00000136561.1|Vill|ENSMUSG00000038775.8|villin-like
mm10_v2_chr14_-_54926784_54926805	0.544639	Zic3	ENSMUST00000022813.6|Efs|ENSMUSG00000022203.6|embryonal Fyn-associated substrate
mm10_v2_chr1_-_134955847_134955852	0.542495	Zic3	ENSMUST00000168381.1|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm10_v2_chr4_-_68954351_68954397	0.539874	Zic3	ENSMUST00000030036.5|Brinp1|ENSMUSG00000028351.5|bone morphogenic protein/retinoic acid inducible neural specific 1
mm10_v2_chr6_+_83743010_83743038	0.537657	Zic3	ENSMUST00000006431.6|Atp6v1b1|ENSMUSG00000006269.6|ATPase, H+ transporting, lysosomal V1 subunit B1
mm10_v2_chr9_-_77544829_77544862	0.535393	Zic3	ENSMUST00000183734.1|Lrrc1|ENSMUSG00000032352.9|leucine rich repeat containing 1
mm10_v2_chr11_-_61494173_61494296	0.528258	Zic3	ENSMUST00000101085.2|Mapk7|ENSMUSG00000001034.11|mitogen-activated protein kinase 7 	ENSMUST00000079080.6|Mapk7|ENSMUSG00000001034.11|mitogen-activated protein kinase 7 	ENSMUST00000108714.1|Mapk7|ENSMUSG00000001034.11|mitogen-activated protein kinase 7
mm10_v2_chr2_+_127008711_127008756	0.526385	Zic3	ENSMUST00000110394.1|Ap4e1|ENSMUSG00000001998.9|adaptor-related protein complex AP-4, epsilon 1 	ENSMUST00000002063.8|Ap4e1|ENSMUSG00000001998.9|adaptor-related protein complex AP-4, epsilon 1
mm10_v2_chr2_-_39190687_39190746	0.526072	Zic3	ENSMUST00000142872.1|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion 	ENSMUST00000038874.5|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion
mm10_v2_chr4_+_19605451_19605451	0.52507	Zic3	ENSMUST00000108250.2|Gm12353|ENSMUSG00000078772.2|predicted gene 12353
mm10_v2_chr11_+_116280939_116280939	0.524677	Zic3	ENSMUST00000055872.2|Galr2|ENSMUSG00000020793.5|galanin receptor 2
mm10_v2_chr17_-_32788284_32788297	0.523877	Zic3	ENSMUST00000159086.2|Zfp871|ENSMUSG00000024298.8|zinc finger protein 871
mm10_v2_chr1_-_38129618_38129679	0.523261	Zic3	ENSMUST00000027251.6|Rev1|ENSMUSG00000026082.6|REV1 homolog (S. cerevisiae)
mm10_v2_chr7_-_126799163_126799254	0.523074	Zic3	ENSMUST00000032934.5|Aldoa|ENSMUSG00000030695.7|aldolase A, fructose-bisphosphate
mm10_v2_chr11_+_67798269_67798288	0.517762	Zic3	ENSMUST00000168612.1|Dhrs7c|ENSMUSG00000033044.6|dehydrogenase/reductase (SDR family) member 7C 	ENSMUST00000040574.4|Dhrs7c|ENSMUSG00000033044.6|dehydrogenase/reductase (SDR family) member 7C
mm10_v2_chr16_+_32735886_32735886	0.503194	Zic3	ENSMUST00000132475.1|Muc4|ENSMUSG00000079620.7|mucin 4 	ENSMUST00000096106.3|Muc4|ENSMUSG00000079620.7|mucin 4
mm10_v2_chr1_-_153186447_153186447	0.501108	Zic3	ENSMUST00000027753.6|Lamc2|ENSMUSG00000026479.7|laminin, gamma 2
mm10_v2_chr11_+_98836775_98836831	0.499749	Zic3	ENSMUST00000107479.2|Rapgefl1|ENSMUSG00000038020.5|Rap guanine nucleotide exchange factor (GEF)-like 1
mm10_v2_chr2_+_153943919_153943934	0.496356	Zic3	ENSMUST00000099181.1|Bpifb4|ENSMUSG00000074665.4|BPI fold containing family B, member 4
mm10_v2_chr2_-_24935148_24935252	0.494958	Zic3	ENSMUST00000102935.3|Arrdc1|ENSMUSG00000026972.9|arrestin domain containing 1 	ENSMUST00000133934.1|Arrdc1|ENSMUSG00000026972.9|arrestin domain containing 1 	ENSMUST00000028349.7|Arrdc1|ENSMUSG00000026972.9|arrestin domain containing 1
mm10_v2_chr2_-_156111954_156111978	0.493038	Zic3	ENSMUST00000059647.5|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000109604.2|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000142960.2|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000138068.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000136296.2|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000128499.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12
mm10_v2_chr11_-_79146407_79146422	0.489148	Zic3	ENSMUST00000018478.4|Ksr1|ENSMUSG00000018334.10|kinase suppressor of ras 1 	ENSMUST00000108264.1|Ksr1|ENSMUSG00000018334.10|kinase suppressor of ras 1
mm10_v2_chr4_+_137277489_137277518	0.486912	Zic3	ENSMUST00000045747.4|Wnt4|ENSMUSG00000036856.4|wingless-related MMTV integration site 4
mm10_v2_chr9_+_110117703_110117703	0.483274	Zic3	ENSMUST00000098355.3|Gm10615|ENSMUSG00000074056.3|predicted gene 10615
mm10_v2_chr15_-_78206391_78206407	0.480335	Zic3	ENSMUST00000120592.1|Pvalb|ENSMUSG00000005716.10|parvalbumin
mm10_v2_chr5_-_99978914_99978966	0.480143	Zic3	ENSMUST00000112939.3|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000171786.1|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000072750.6|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000019128.8|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D 	ENSMUST00000172361.1|Hnrnpd|ENSMUSG00000000568.9|heterogeneous nuclear ribonucleoprotein D
mm10_v2_chr5_+_123076275_123076354	0.477196	Zic3	ENSMUST00000067505.8|Tmem120b|ENSMUSG00000054434.8|transmembrane protein 120B 	ENSMUST00000111619.3|Tmem120b|ENSMUSG00000054434.8|transmembrane protein 120B 	ENSMUST00000160344.1|Tmem120b|ENSMUSG00000054434.8|transmembrane protein 120B
mm10_v2_chr5_+_107437908_107437997	0.466513	Zic3	ENSMUST00000094541.2|Btbd8|ENSMUSG00000070632.3|BTB (POZ) domain containing 8
mm10_v2_chr16_-_22439570_22439603	0.464021	Zic3	ENSMUST00000170393.1|Etv5|ENSMUSG00000013089.9|ets variant gene 5
mm10_v2_chr8_-_126475062_126475097	0.463648	Zic3	ENSMUST00000170518.1|Gm17296|ENSMUSG00000090290.1|predicted gene, 17296
mm10_v2_chr4_+_48585193_48585215	0.45867	Zic3	ENSMUST00000107703.1|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr1_+_135836380_135836396	0.458579	Zic3	ENSMUST00000178204.1|Tnnt2|ENSMUSG00000026414.7|troponin T2, cardiac
mm10_v2_chr2_-_170497141_170497147	0.455194	Zic3	ENSMUST00000038824.5|Cyp24a1|ENSMUSG00000038567.5|cytochrome P450, family 24, subfamily a, polypeptide 1
mm10_v2_chr2_+_121295437_121295486	0.452096	Zic3	ENSMUST00000110639.1|Map1a|ENSMUSG00000027254.7|microtubule-associated protein 1 A
mm10_v2_chr15_-_85581809_85581821	0.45169	Zic3	ENSMUST00000023015.7|Wnt7b|ENSMUSG00000022382.8|wingless-related MMTV integration site 7B
mm10_v2_chr19_+_46396885_46397004	0.450551	Zic3	ENSMUST00000039922.6|Sufu|ENSMUSG00000025231.10|suppressor of fused homolog (Drosophila) 	ENSMUST00000111867.2|Sufu|ENSMUSG00000025231.10|suppressor of fused homolog (Drosophila) 	ENSMUST00000120778.1|Sufu|ENSMUSG00000025231.10|suppressor of fused homolog (Drosophila)
mm10_v2_chr11_-_34833631_34833663	0.446298	Zic3	ENSMUST00000093191.2|Spdl1|ENSMUSG00000069910.2|spindle apparatus coiled-coil protein 1
mm10_v2_chr7_+_30291941_30291968	0.445335	Zic3	ENSMUST00000144508.1|Clip3|ENSMUSG00000013921.8|CAP-GLY domain containing linker protein 3
mm10_v2_chr2_+_156840077_156840141	0.440333	Zic3	ENSMUST00000081335.6|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2 	ENSMUST00000073352.3|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2
mm10_v2_chr11_+_82892116_82892128	0.435552	Zic3	ENSMUST00000018988.5|Fndc8|ENSMUSG00000018844.6|fibronectin type III domain containing 8
mm10_v2_chr9_+_108826320_108826320	0.431318	Zic3	ENSMUST00000024238.5|Celsr3|ENSMUSG00000023473.6|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)
mm10_v2_chr7_-_139978709_139978747	0.429853	Zic3	ENSMUST00000121412.1|6430531B16Rik|ENSMUSG00000073795.4|RIKEN cDNA 6430531B16 gene
mm10_v2_chr3_+_37348645_37348716	0.42758	Zic3	ENSMUST00000038885.3|Fgf2|ENSMUSG00000037225.7|fibroblast growth factor 2
mm10_v2_chr12_+_3807076_3807160	0.423087	Zic3	ENSMUST00000174817.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr17_-_28517509_28517558	0.421599	Zic3	ENSMUST00000114792.1|Fkbp5|ENSMUSG00000024222.10|FK506 binding protein 5 	ENSMUST00000177939.1|Fkbp5|ENSMUSG00000024222.10|FK506 binding protein 5
mm10_v2_chr2_-_20968526_20968625	0.421187	Zic3	ENSMUST00000141298.2|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21 	ENSMUST00000125783.2|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr2_-_24763047_24763153	0.419123	Zic3	ENSMUST00000100348.3|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000041342.5|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000114447.1|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000102939.2|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENSMUST00000070864.7|Cacna1b|ENSMUSG00000004113.12|calcium channel, voltage-dependent, N type, alpha 1B subunit
mm10_v2_chr7_+_73391160_73391296	0.413091	Zic3	ENSMUST00000128471.1|Rgma|ENSMUSG00000070509.9|RGM domain family, member A
mm10_v2_chr6_-_52234902_52234960	0.410837	Zic3	ENSMUST00000125581.1|Hoxa10|ENSMUSG00000000938.11|homeobox A10
mm10_v2_chr8_-_87959560_87959595	0.40853	Zic3	ENSMUST00000109655.2|Zfp423|ENSMUSG00000045333.9|zinc finger protein 423
mm10_v2_chr4_-_137118135_137118165	0.405738	Zic3	ENSMUST00000154285.1|Gm13001|ENSMUSG00000087417.1|predicted gene 13001
mm10_v2_chr4_-_62208426_62208487	0.403887	Zic3	ENSMUST00000068822.3|Zfp37|ENSMUSG00000028389.4|zinc finger protein 37
mm10_v2_chr6_+_17307040_17307085	0.403319	Zic3	ENSMUST00000123439.1|Cav1|ENSMUSG00000007655.10|caveolin 1, caveolae protein
mm10_v2_chr8_-_105637403_105637497	0.398216	Zic3	ENSMUST00000182046.1|Gm5914|ENSMUSG00000098120.1|predicted gene 5914
mm10_v2_chr4_-_130139149_130139162	0.398076	Zic3	ENSMUST00000030562.6|Hcrtr1|ENSMUSG00000028778.9|hypocretin (orexin) receptor 1
mm10_v2_chr16_+_94370618_94370784	0.396678	Zic3	ENSMUST00000117648.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000147352.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150346.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000155692.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000153988.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000141856.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000152117.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150097.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000122895.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000151770.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3
mm10_v2_chr4_+_48585135_48585187	0.394502	Zic3	ENSMUST00000030032.6|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr5_+_12383156_12383177	0.39114	Zic3	ENSMUST00000030868.6|Sema3d|ENSMUSG00000040254.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
mm10_v2_chr7_-_126799134_126799155	0.390862	Zic3	ENSMUST00000087566.4|Aldoa|ENSMUSG00000030695.7|aldolase A, fructose-bisphosphate
mm10_v2_chr9_-_108083330_108083370	0.388302	Zic3	ENSMUST00000159372.1|Rnf123|ENSMUSG00000041528.9|ring finger protein 123 	ENSMUST00000160249.1|Rnf123|ENSMUSG00000041528.9|ring finger protein 123
mm10_v2_chr4_+_131873608_131873679	0.387112	Zic3	ENSMUST00000053819.3|Srsf4|ENSMUSG00000028911.10|serine/arginine-rich splicing factor 4
mm10_v2_chr2_+_69722797_69722840	0.381466	Zic3	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr5_+_136693146_136693146	0.379655	Zic3	ENSMUST00000005611.5|Myl10|ENSMUSG00000005474.5|myosin, light chain 10, regulatory
mm10_v2_chr2_+_19445632_19445663	0.377581	Zic3	ENSMUST00000028068.2|Ptf1a|ENSMUSG00000026735.2|pancreas specific transcription factor, 1a
mm10_v2_chr16_+_32914094_32914142	0.37691	Zic3	ENSMUST00000023491.6|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000170899.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000171118.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000170201.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000165616.1|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENSMUST00000135193.2|Lrch3|ENSMUSG00000022801.7|leucine-rich repeats and calponin homology (CH) domain containing 3
mm10_v2_chrX_+_137049586_137049654	0.372794	Zic3	ENSMUST00000047852.7|Fam199x|ENSMUSG00000042595.7|family with sequence similarity 199, X-linked
mm10_v2_chr4_+_108460000_108460030	0.3719	Zic3	ENSMUST00000097925.2|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr4_-_41275091_41275144	0.371373	Zic3	ENSMUST00000030143.6|Ubap2|ENSMUSG00000028433.8|ubiquitin-associated protein 2 	ENSMUST00000108068.1|Ubap2|ENSMUSG00000028433.8|ubiquitin-associated protein 2
mm10_v2_chr7_+_130865756_130865812	0.369016	Zic3	ENSMUST00000120441.1|Plekha1|ENSMUSG00000040268.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
mm10_v2_chr11_+_50237002_50237014	0.358485	Zic3	ENSMUST00000180443.1|Gm26542|ENSMUSG00000097887.1|predicted gene, 26542
mm10_v2_chr13_+_118714678_118714701	0.356804	Zic3	ENSMUST00000022246.8|Fgf10|ENSMUSG00000021732.8|fibroblast growth factor 10
mm10_v2_chr6_-_39725448_39725478	0.354707	Zic3	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr8_+_106510853_106510924	0.351691	Zic3	ENSMUST00000080797.6|Cdh3|ENSMUSG00000061048.7|cadherin 3
mm10_v2_chr17_-_24479034_24479083	0.349185	Zic3	ENSMUST00000179163.1|Mlst8|ENSMUSG00000024142.8|MTOR associated protein, LST8 homolog (S. cerevisiae) 	ENSMUST00000070888.6|Mlst8|ENSMUSG00000024142.8|MTOR associated protein, LST8 homolog (S. cerevisiae)
mm10_v2_chr11_-_70322520_70322628	0.345824	Zic3	ENSMUST00000019051.2|Alox12e|ENSMUSG00000018907.4|arachidonate lipoxygenase, epidermal
mm10_v2_chr15_-_7398233_7398323	0.345734	Zic3	ENSMUST00000058593.3|Egflam|ENSMUSG00000042961.7|EGF-like, fibronectin type III and laminin G domains
mm10_v2_chr3_-_108415552_108415552	0.340827	Zic3	ENSMUST00000090558.3|Celsr2|ENSMUSG00000068740.7|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)
mm10_v2_chr3_-_66981279_66981318	0.339036	Zic3	ENSMUST00000162098.2|Shox2|ENSMUSG00000027833.10|short stature homeobox 2
mm10_v2_chr17_+_35135196_35135243	0.333889	Zic3	ENSMUST00000172571.1|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6 	ENSMUST00000173491.1|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6
mm10_v2_chr7_-_4812351_4812362	0.333149	Zic3	ENSMUST00000079496.7|Ube2s|ENSMUSG00000060860.7|ubiquitin-conjugating enzyme E2S
mm10_v2_chr12_-_111813834_111813858	0.332717	Zic3	ENSMUST00000021715.5|Xrcc3|ENSMUSG00000021287.6|X-ray repair complementing defective repair in Chinese hamster cells 3
mm10_v2_chr1_+_39367816_39367851	0.329667	Zic3	ENSMUST00000179954.1|Rpl31|ENSMUSG00000073702.5|ribosomal protein L31 	ENSMUST00000178079.1|Rpl31|ENSMUSG00000073702.5|ribosomal protein L31 	ENSMUST00000086535.6|Rpl31|ENSMUSG00000073702.5|ribosomal protein L31
mm10_v2_chr15_-_102366314_102366338	0.324831	Zic3	ENSMUST00000078508.5|Sp7|ENSMUSG00000060284.6|Sp7 transcription factor 7
mm10_v2_chr1_-_120270253_120270423	0.318716	Zic3	ENSMUST00000112639.1|Steap3|ENSMUSG00000026389.10|STEAP family member 3
mm10_v2_chr3_-_102204576_102204693	0.317622	Zic3	ENSMUST00000159388.1|Vangl1|ENSMUSG00000027860.9|vang-like 1 (van gogh, Drosophila)
mm10_v2_chr7_+_122219469_122219504	0.316071	Zic3	ENSMUST00000033152.4|Chp2|ENSMUSG00000030865.4|calcineurin-like EF hand protein 2
mm10_v2_chr7_+_35802593_35802593	0.311066	Zic3	ENSMUST00000052454.2|E130304I02Rik|ENSMUSG00000044997.2|RIKEN cDNA E130304I02 gene
mm10_v2_chr9_+_56418624_56418681	0.311064	Zic3	ENSMUST00000034879.3|Hmg20a|ENSMUSG00000032329.3|high mobility group 20A
mm10_v2_chr4_-_154097105_154097173	0.304739	Zic3	ENSMUST00000105643.1|Trp73|ENSMUSG00000029026.10|transformation related protein 73 	ENSMUST00000133533.1|Trp73|ENSMUSG00000029026.10|transformation related protein 73 	ENSMUST00000097762.4|Trp73|ENSMUSG00000029026.10|transformation related protein 73
mm10_v2_chr5_-_123046999_123047025	0.304603	Zic3	ENSMUST00000031437.7|Morn3|ENSMUSG00000029477.8|MORN repeat containing 3
mm10_v2_chr2_-_127482499_127482577	0.304066	Zic3	ENSMUST00000088538.5|Kcnip3|ENSMUSG00000079056.6|Kv channel interacting protein 3, calsenilin
mm10_v2_chr4_+_124986430_124986490	0.303161	Zic3	ENSMUST00000030687.7|Rspo1|ENSMUSG00000028871.7|R-spondin homolog (Xenopus laevis)
mm10_v2_chr7_-_132852606_132852655	0.302151	Zic3	ENSMUST00000120425.1|Mettl10|ENSMUSG00000030960.10|methyltransferase like 10
mm10_v2_chr9_-_82975475_82975493	0.301032	Zic3	ENSMUST00000034787.5|Phip|ENSMUSG00000032253.7|pleckstrin homology domain interacting protein
mm10_v2_chr11_+_96789213_96789249	0.298841	Zic3	ENSMUST00000079702.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr15_+_57985873_57985910	0.298226	Zic3	ENSMUST00000050374.2|Fam83a|ENSMUSG00000051225.3|family with sequence similarity 83, member A
mm10_v2_chr9_-_60687459_60687672	0.296285	Zic3	ENSMUST00000114032.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000166168.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000132366.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr6_-_52246214_52246214	0.293993	Zic3	ENSMUST00000048026.8|Hoxa11|ENSMUSG00000038210.9|homeobox A11
mm10_v2_chr9_+_59750876_59750918	0.292488	Zic3	ENSMUST00000136740.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000135298.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000128341.1|Myo9a|ENSMUSG00000039585.9|myosin IXa
mm10_v2_chr7_-_140950236_140950257	0.289503	Zic3	ENSMUST00000026562.4|Ifitm5|ENSMUSG00000025489.4|interferon induced transmembrane protein 5
mm10_v2_chr9_+_88438598_88438598	0.287426	Zic3	ENSMUST00000181138.1|4932427H20Rik|ENSMUSG00000097865.1|RIKEN cDNA 4932427H20 gene
mm10_v2_chr7_-_126800036_126800054	0.287099	Zic3	ENSMUST00000133514.1|Aldoa|ENSMUSG00000030695.7|aldolase A, fructose-bisphosphate 	ENSMUST00000151137.1|Aldoa|ENSMUSG00000030695.7|aldolase A, fructose-bisphosphate
mm10_v2_chr11_-_85139939_85140038	0.28615	Zic3	ENSMUST00000108075.2|Usp32|ENSMUSG00000000804.8|ubiquitin specific peptidase 32
mm10_v2_chr11_-_100441795_100441813	0.285964	Zic3	ENSMUST00000107398.1|Nt5c3b|ENSMUSG00000017176.11|5'-nucleotidase, cytosolic IIIB
mm10_v2_chrX_-_133688978_133689005	0.285645	Zic3	ENSMUST00000149154.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19 	ENSMUST00000167944.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19
mm10_v2_chr1_-_134955908_134955955	0.2843	Zic3	ENSMUST00000045665.6|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000086444.4|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000112163.1|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm10_v2_chrX_-_7574120_7574312	0.282132	Zic3	ENSMUST00000045924.7|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F 	ENSMUST00000115742.2|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F 	ENSMUST00000150787.1|Ppp1r3f|ENSMUSG00000039556.10|protein phosphatase 1, regulatory (inhibitor) subunit 3F
mm10_v2_chr17_+_34593388_34593417	0.281966	Zic3	ENSMUST00000174532.1|Pbx2|ENSMUSG00000034673.8|pre B cell leukemia homeobox 2
mm10_v2_chr15_+_40655020_40655054	0.281607	Zic3	ENSMUST00000053467.4|Zfpm2|ENSMUSG00000022306.8|zinc finger protein, multitype 2
mm10_v2_chr11_+_96789118_96789146	0.280388	Zic3	ENSMUST00000018810.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chrX_+_37126777_37126795	0.277291	Zic3	ENSMUST00000016553.4|Nkap|ENSMUSG00000016409.4|NFKB activating protein
mm10_v2_chr18_-_9282754_9282809	0.27649	Zic3	ENSMUST00000041007.3|Gjd4|ENSMUSG00000036855.3|gap junction protein, delta 4
mm10_v2_chr3_+_87930256_87930350	0.275867	Zic3	ENSMUST00000055984.6|Isg20l2|ENSMUSG00000048039.8|interferon stimulated exonuclease gene 20-like 2
mm10_v2_chr2_+_32288317_32288355	0.275643	Zic3	ENSMUST00000131712.1|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2 	ENSMUST00000133113.1|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2 	ENSMUST00000081670.6|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2 	ENSMUST00000147707.1|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2 	ENSMUST00000129193.1|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2
mm10_v2_chr19_+_46397009_46397033	0.274123	Zic3	ENSMUST00000118440.1|Sufu|ENSMUSG00000025231.10|suppressor of fused homolog (Drosophila)
mm10_v2_chr15_+_89499598_89499653	0.273492	Zic3	ENSMUST00000109309.1|Shank3|ENSMUSG00000022623.9|SH3/ankyrin domain gene 3
mm10_v2_chr3_+_14480692_14480773	0.272377	Zic3	ENSMUST00000037321.7|Slc7a12|ENSMUSG00000039710.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 12 	ENSMUST00000120484.1|Slc7a12|ENSMUSG00000039710.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 12 	ENSMUST00000120801.1|Slc7a12|ENSMUSG00000039710.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 12
mm10_v2_chr18_-_74064899_74064943	0.271694	Zic3	ENSMUST00000159162.1|Mapk4|ENSMUSG00000024558.6|mitogen-activated protein kinase 4 	ENSMUST00000091851.3|Mapk4|ENSMUSG00000024558.6|mitogen-activated protein kinase 4
mm10_v2_chr3_+_90266507_90266566	0.267703	Zic3	ENSMUST00000098914.3|Dennd4b|ENSMUSG00000042404.10|DENN/MADD domain containing 4B
mm10_v2_chr17_-_73710415_73710451	0.267072	Zic3	ENSMUST00000112591.2|Galnt14|ENSMUSG00000024064.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 	ENSMUST00000024858.5|Galnt14|ENSMUSG00000024064.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14
mm10_v2_chr4_-_129558387_129558398	0.264757	Zic3	ENSMUST00000067240.4|Lck|ENSMUSG00000000409.8|lymphocyte protein tyrosine kinase
mm10_v2_chr19_+_6400611_6400623	0.263898	Zic3	ENSMUST00000113467.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2
mm10_v2_chr11_-_62648458_62648523	0.260858	Zic3	ENSMUST00000057194.8|Fam211a|ENSMUSG00000046417.8|family with sequence similarity 211, member A
mm10_v2_chr2_-_148443543_148443582	0.260816	Zic3	ENSMUST00000099269.3|Cd93|ENSMUSG00000027435.8|CD93 antigen
mm10_v2_chr4_-_88691268_88691268	0.260795	Zic3	ENSMUST00000105146.2|Ifnab|ENSMUSG00000078353.2|interferon alpha B
mm10_v2_chr2_-_168590315_168590372	0.256872	Zic3	ENSMUST00000109184.1|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
mm10_v2_chr7_-_44257378_44257378	0.252796	Zic3	ENSMUST00000107945.1|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular 	ENSMUST00000118216.1|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular
mm10_v2_chr1_-_171531660_171531733	0.251988	Zic3	ENSMUST00000168184.1|Itln1|ENSMUSG00000038209.6|intelectin 1 (galactofuranose binding)
mm10_v2_chr3_+_58415689_58415689	0.251874	Zic3	ENSMUST00000099090.2|Tsc22d2|ENSMUSG00000027806.5|TSC22 domain family, member 2
mm10_v2_chrY_-_1286563_1286615	0.251343	Zic3	ENSMUST00000091190.5|Ddx3y|ENSMUSG00000069045.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
mm10_v2_chr8_+_40423786_40423848	0.250321	Zic3	ENSMUST00000049389.4|Zdhhc2|ENSMUSG00000039470.9|zinc finger, DHHC domain containing 2 	ENSMUST00000128166.1|Zdhhc2|ENSMUSG00000039470.9|zinc finger, DHHC domain containing 2 	ENSMUST00000167766.1|Zdhhc2|ENSMUSG00000039470.9|zinc finger, DHHC domain containing 2
mm10_v2_chr17_+_35135695_35135781	0.24805	Zic3	ENSMUST00000174478.1|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6 	ENSMUST00000174281.2|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6 	ENSMUST00000173550.1|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6
mm10_v2_chr7_+_99268338_99268388	0.245801	Zic3	ENSMUST00000107100.2|Map6|ENSMUSG00000055407.7|microtubule-associated protein 6
mm10_v2_chr19_+_4839366_4839482	0.245168	Zic3	ENSMUST00000088653.2|Ccdc87|ENSMUSG00000067872.2|coiled-coil domain containing 87
mm10_v2_chr17_-_56300286_56300297	0.244805	Zic3	ENSMUST00000097303.1|Arrdc5|ENSMUSG00000073380.1|arrestin domain containing 5
mm10_v2_chrX_-_108834303_108834381	0.243408	Zic3	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chr12_+_55565188_55565257	0.240559	Zic3	ENSMUST00000080123.1|Aldoart2|ENSMUSG00000063129.1|aldolase 1 A, retrogene 2
mm10_v2_chr8_+_4248188_4248219	0.239114	Zic3	ENSMUST00000110993.1|Gm14378|ENSMUSG00000089736.1|predicted gene 14378
mm10_v2_chr6_-_87533219_87533264	0.235609	Zic3	ENSMUST00000113637.2|Arhgap25|ENSMUSG00000030047.8|Rho GTPase activating protein 25 	ENSMUST00000071024.6|Arhgap25|ENSMUSG00000030047.8|Rho GTPase activating protein 25
mm10_v2_chr11_-_69549108_69549108	0.235253	Zic3	ENSMUST00000108659.1|Dnah2|ENSMUSG00000005237.7|dynein, axonemal, heavy chain 2
mm10_v2_chr7_+_141079125_141079167	0.233806	Zic3	ENSMUST00000159375.1|Pkp3|ENSMUSG00000054065.5|plakophilin 3
mm10_v2_chr5_-_123721007_123721062	0.233725	Zic3	ENSMUST00000031376.7|Zcchc8|ENSMUSG00000029427.7|zinc finger, CCHC domain containing 8
mm10_v2_chr14_-_55116935_55116980	0.233459	Zic3	ENSMUST00000022819.5|Jph4|ENSMUSG00000022208.5|junctophilin 4
mm10_v2_chr10_+_80805233_80805249	0.232445	Zic3	ENSMUST00000036016.4|Amh|ENSMUSG00000035262.4|anti-Mullerian hormone
mm10_v2_chr12_+_83632208_83632325	0.230238	Zic3	ENSMUST00000048155.9|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182618.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000183154.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182036.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182347.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25
mm10_v2_chr11_+_106374820_106374832	0.229133	Zic3	ENSMUST00000106816.1|2310007L24Rik|ENSMUSG00000009210.4|RIKEN cDNA 2310007L24 gene
mm10_v2_chr12_+_89812467_89812488	0.22709	Zic3	ENSMUST00000110133.2|Nrxn3|ENSMUSG00000066392.5|neurexin III 	ENSMUST00000110130.2|Nrxn3|ENSMUSG00000066392.5|neurexin III
mm10_v2_chrX_+_162760427_162760488	0.226416	Zic3	ENSMUST00000112326.1|Rbbp7|ENSMUSG00000031353.7|retinoblastoma binding protein 7
mm10_v2_chr17_+_83350925_83350998	0.223615	Zic3	ENSMUST00000096766.4|Eml4|ENSMUSG00000032624.9|echinoderm microtubule associated protein like 4 	ENSMUST00000112363.2|Eml4|ENSMUSG00000032624.9|echinoderm microtubule associated protein like 4 	ENSMUST00000049503.8|Eml4|ENSMUSG00000032624.9|echinoderm microtubule associated protein like 4
mm10_v2_chr2_-_85196697_85196708	0.222899	Zic3	ENSMUST00000099930.2|Lrrc55|ENSMUSG00000075224.2|leucine rich repeat containing 55 	ENSMUST00000111601.1|Lrrc55|ENSMUSG00000075224.2|leucine rich repeat containing 55
mm10_v2_chr15_-_83149307_83149350	0.222732	Zic3	ENSMUST00000100375.4|Poldip3|ENSMUSG00000041815.7|polymerase (DNA-directed), delta interacting protein 3
mm10_v2_chr10_+_39732364_39732450	0.221898	Zic3	ENSMUST00000164763.1|Rev3l|ENSMUSG00000019841.9|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm10_v2_chr3_-_81924463_81924463	0.219509	Zic3	ENSMUST00000069880.2|Gm9989|ENSMUSG00000056023.2|predicted gene 9989
mm10_v2_chr3_+_88142536_88142572	0.215591	Zic3	ENSMUST00000107558.2|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D 	ENSMUST00000107559.2|Mef2d|ENSMUSG00000001419.11|myocyte enhancer factor 2D
mm10_v2_chr11_+_96789149_96789206	0.215433	Zic3	ENSMUST00000093943.3|Cbx1|ENSMUSG00000018666.7|chromobox 1
mm10_v2_chr8_-_94098811_94098811	0.21455	Zic3	ENSMUST00000034206.4|Bbs2|ENSMUSG00000031755.5|Bardet-Biedl syndrome 2 (human)
mm10_v2_chr1_+_59764264_59764286	0.214474	Zic3	ENSMUST00000087435.5|Bmpr2|ENSMUSG00000067336.5|bone morphogenetic protein receptor, type II (serine/threonine kinase)
mm10_v2_chr18_+_63708689_63708730	0.212622	Zic3	ENSMUST00000072726.5|Wdr7|ENSMUSG00000040560.9|WD repeat domain 7
mm10_v2_chr2_+_30416031_30416077	0.21241	Zic3	ENSMUST00000042055.3|Ppp2r4|ENSMUSG00000039515.5|protein phosphatase 2A, regulatory subunit B (PR 53)
mm10_v2_chr18_+_46850034_46850059	0.204324	Zic3	ENSMUST00000025358.2|4833403I15Rik|ENSMUSG00000024481.4|RIKEN cDNA 4833403I15 gene
mm10_v2_chr8_-_47289394_47289411	0.203452	Zic3	ENSMUST00000079195.5|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chr6_+_7844806_7844859	0.201708	Zic3	ENSMUST00000040159.4|C1galt1|ENSMUSG00000042460.4|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
mm10_v2_chr17_-_6961156_6961156	0.201555	Zic3	ENSMUST00000063683.6|Tagap1|ENSMUSG00000052031.7|T cell activation GTPase activating protein 1
mm10_v2_chr15_-_101370125_101370169	0.200021	Zic3	ENSMUST00000077196.4|Krt80|ENSMUSG00000037185.8|keratin 80
mm10_v2_chr14_+_31217850_31217866	0.199176	Zic3	ENSMUST00000090180.2|Sema3g|ENSMUSG00000021904.5|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G
mm10_v2_chrX_+_71364901_71364937	0.194844	Zic3	ENSMUST00000132837.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1
mm10_v2_chr2_+_149830840_149830879	0.193447	Zic3	ENSMUST00000109934.1|Syndig1|ENSMUSG00000074736.4|synapse differentiation inducing 1 	ENSMUST00000140870.1|Syndig1|ENSMUSG00000074736.4|synapse differentiation inducing 1
mm10_v2_chr3_-_46447939_46447980	0.192907	Zic3	ENSMUST00000166505.1|Pabpc4l|ENSMUSG00000090919.1|poly(A) binding protein, cytoplasmic 4-like
mm10_v2_chr16_-_32810477_32810494	0.192871	Zic3	ENSMUST00000179384.2|Gm933|ENSMUSG00000094430.2|predicted gene 933
mm10_v2_chr10_+_81137953_81137992	0.192752	Zic3	ENSMUST00000117956.1|Zbtb7a|ENSMUSG00000035011.9|zinc finger and BTB domain containing 7a
mm10_v2_chr7_-_48881032_48881050	0.186114	Zic3	ENSMUST00000058745.8|E2f8|ENSMUSG00000046179.11|E2F transcription factor 8
mm10_v2_chr1_+_135729147_135729234	0.186008	Zic3	ENSMUST00000027677.7|Csrp1|ENSMUSG00000026421.8|cysteine and glycine-rich protein 1
mm10_v2_chr11_-_102316660_102316680	0.184415	Zic3	ENSMUST00000146896.2|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I 	ENSMUST00000079589.4|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I
mm10_v2_chr12_-_33092875_33092902	0.183798	Zic3	ENSMUST00000095774.2|Cdhr3|ENSMUSG00000035860.8|cadherin-related family member 3
mm10_v2_chr10_-_17947997_17948098	0.182223	Zic3	ENSMUST00000037879.6|Heca|ENSMUSG00000039879.8|headcase homolog (Drosophila)
mm10_v2_chr14_+_41131777_41131794	0.181745	Zic3	ENSMUST00000022314.3|Sftpa1|ENSMUSG00000021789.8|surfactant associated protein A1 	ENSMUST00000170719.1|Sftpa1|ENSMUSG00000021789.8|surfactant associated protein A1
mm10_v2_chrX_-_61185558_61185558	0.180805	Zic3	ENSMUST00000166381.1|Cdr1|ENSMUSG00000090546.1|cerebellar degeneration related antigen 1
mm10_v2_chr14_-_56811464_56811464	0.180524	Zic3	ENSMUST00000173954.1|Zmym5|ENSMUSG00000040123.10|zinc finger, MYM-type 5
mm10_v2_chr7_+_45684398_45684429	0.18051	Zic3	ENSMUST00000107742.2|Ntn5|ENSMUSG00000070564.7|netrin 5 	ENSMUST00000183120.1|Ntn5|ENSMUSG00000070564.7|netrin 5
mm10_v2_chr7_-_30169701_30169766	0.17991	Zic3	ENSMUST00000062181.7|Zfp146|ENSMUSG00000037029.7|zinc finger protein 146
mm10_v2_chrX_+_71663665_71663671	0.178562	Zic3	ENSMUST00000070449.5|Gpr50|ENSMUSG00000056380.7|G-protein-coupled receptor 50
mm10_v2_chr7_+_99267428_99267447	0.174619	Zic3	ENSMUST00000068973.4|Map6|ENSMUSG00000055407.7|microtubule-associated protein 6 	ENSMUST00000122101.1|Map6|ENSMUSG00000055407.7|microtubule-associated protein 6
mm10_v2_chr2_+_129100995_129101066	0.17307	Zic3	ENSMUST00000103205.4|Polr1b|ENSMUSG00000027395.9|polymerase (RNA) I polypeptide B 	ENSMUST00000028874.7|Polr1b|ENSMUSG00000027395.9|polymerase (RNA) I polypeptide B
mm10_v2_chr11_-_78497734_78497793	0.172817	Zic3	ENSMUST00000061174.6|Sarm1|ENSMUSG00000050132.7|sterile alpha and HEAT/Armadillo motif containing 1
mm10_v2_chr7_+_90442729_90442865	0.172762	Zic3	ENSMUST00000061767.4|Crebzf|ENSMUSG00000051451.5|CREB/ATF bZIP transcription factor 	ENSMUST00000107206.1|Crebzf|ENSMUSG00000051451.5|CREB/ATF bZIP transcription factor
mm10_v2_chr1_+_92831614_92831645	0.172318	Zic3	ENSMUST00000045970.6|Gpc1|ENSMUSG00000034220.6|glypican 1
mm10_v2_chr19_-_5688149_5688149	0.171418	Zic3	ENSMUST00000068169.5|Pcnxl3|ENSMUSG00000054874.6|pecanex-like 3 (Drosophila)
mm10_v2_chr2_-_144332146_144332146	0.169178	Zic3	ENSMUST00000037423.3|Ovol2|ENSMUSG00000037279.7|ovo-like 2 (Drosophila)
mm10_v2_chr17_+_35135174_35135181	0.163668	Zic3	ENSMUST00000166426.2|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6 	ENSMUST00000025250.7|Bag6|ENSMUSG00000024392.11|BCL2-associated athanogene 6
mm10_v2_chr1_-_106714217_106714330	0.162591	Zic3	ENSMUST00000112751.1|Bcl2|ENSMUSG00000057329.6|B cell leukemia/lymphoma 2
mm10_v2_chr11_+_83852135_83852242	0.161674	Zic3	ENSMUST00000146786.1|Hnf1b|ENSMUSG00000020679.5|HNF1 homeobox B
mm10_v2_chr13_-_54687644_54687688	0.160182	Zic3	ENSMUST00000129881.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44
mm10_v2_chr5_-_110779937_110779967	0.15821	Zic3	ENSMUST00000112426.1|Pus1|ENSMUSG00000029507.10|pseudouridine synthase 1
mm10_v2_chrX_-_167382747_167382760	0.157882	Zic3	ENSMUST00000026839.4|Prps2|ENSMUSG00000025742.5|phosphoribosyl pyrophosphate synthetase 2
mm10_v2_chr2_+_30416096_30416147	0.156951	Zic3	ENSMUST00000113601.3|Ppp2r4|ENSMUSG00000039515.5|protein phosphatase 2A, regulatory subunit B (PR 53) 	ENSMUST00000113603.3|Ppp2r4|ENSMUSG00000039515.5|protein phosphatase 2A, regulatory subunit B (PR 53)
mm10_v2_chr12_-_102743625_102743688	0.155746	Zic3	ENSMUST00000173760.2|Moap1|ENSMUSG00000096458.1|modulator of apoptosis 1 	ENSMUST00000178384.1|Moap1|ENSMUSG00000096458.1|modulator of apoptosis 1
mm10_v2_chr3_-_92485886_92485901	0.154409	Zic3	ENSMUST00000054599.7|Sprr1a|ENSMUSG00000050359.7|small proline-rich protein 1A
mm10_v2_chr11_-_3371307_3371409	0.153824	Zic3	ENSMUST00000101642.3|Limk2|ENSMUSG00000020451.11|LIM motif-containing protein kinase 2 	ENSMUST00000101640.3|Limk2|ENSMUSG00000020451.11|LIM motif-containing protein kinase 2
mm10_v2_chr1_+_179668202_179668268	0.152996	Zic3	ENSMUST00000040538.3|Sccpdh|ENSMUSG00000038936.7|saccharopine dehydrogenase (putative)
mm10_v2_chr9_+_107587711_107587746	0.152082	Zic3	ENSMUST00000010192.5|Ifrd2|ENSMUSG00000010048.5|interferon-related developmental regulator 2
mm10_v2_chr7_+_121392266_121392296	0.151594	Zic3	ENSMUST00000084628.3|Hs3st2|ENSMUSG00000046321.7|heparan sulfate (glucosamine) 3-O-sulfotransferase 2
mm10_v2_chr10_+_22645011_22645109	0.149738	Zic3	ENSMUST00000042261.4|Slc2a12|ENSMUSG00000037490.5|solute carrier family 2 (facilitated glucose transporter), member 12
mm10_v2_chr2_-_119477613_119477705	0.148426	Zic3	ENSMUST00000110808.1|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae) 	ENSMUST00000049920.7|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae)
mm10_v2_chr11_+_4267095_4267095	0.146884	Zic3	ENSMUST00000040750.3|Lif|ENSMUSG00000034394.8|leukemia inhibitory factor
mm10_v2_chrX_+_163909132_163909169	0.144999	Zic3	ENSMUST00000033734.7|Ap1s2|ENSMUSG00000031367.9|adaptor-related protein complex 1, sigma 2 subunit 	ENSMUST00000112294.2|Ap1s2|ENSMUSG00000031367.9|adaptor-related protein complex 1, sigma 2 subunit
mm10_v2_chr7_-_19399859_19399921	0.141026	Zic3	ENSMUST00000047170.3|Klc3|ENSMUSG00000040714.7|kinesin light chain 3 	ENSMUST00000108459.2|Klc3|ENSMUSG00000040714.7|kinesin light chain 3
mm10_v2_chr11_-_102316691_102316708	0.140351	Zic3	ENSMUST00000107115.1|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I 	ENSMUST00000128016.1|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I
mm10_v2_chr11_-_100354040_100354143	0.140134	Zic3	ENSMUST00000173630.1|Hap1|ENSMUSG00000006930.9|huntingtin-associated protein 1
mm10_v2_chr18_-_67724560_67724599	0.138375	Zic3	ENSMUST00000120934.1|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2 	ENSMUST00000025420.7|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2 	ENSMUST00000122412.1|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2
mm10_v2_chr13_+_74121435_74121515	0.136439	Zic3	ENSMUST00000036208.6|Slc9a3|ENSMUSG00000036123.6|solute carrier family 9 (sodium/hydrogen exchanger), member 3
mm10_v2_chr2_-_156111863_156111943	0.136146	Zic3	ENSMUST00000154889.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000079312.3|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000153634.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000133921.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000131377.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000183518.1|RP23-220D12.12|ENSMUSG00000098950.1|RNA-binding protein 12  	ENSMUST00000184265.1|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000109607.3|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000109608.2|Cpne1|ENSMUSG00000074643.6|copine I
mm10_v2_chrY_-_1245753_1245766	0.1355	Zic3	ENSMUST00000154004.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
mm10_v2_chr4_-_3872105_3872105	0.130112	Zic3	ENSMUST00000105158.1|Mos|ENSMUSG00000078365.5|Moloney sarcoma oncogene
mm10_v2_chr11_-_86544754_86544805	0.130024	Zic3	ENSMUST00000138810.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000058286.2|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000154617.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1
mm10_v2_chr6_+_52713729_52713800	0.127577	Zic3	ENSMUST00000080723.4|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1 	ENSMUST00000149588.1|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1
mm10_v2_chr7_-_132852657_132852673	0.126985	Zic3	ENSMUST00000033257.8|Mettl10|ENSMUSG00000030960.10|methyltransferase like 10
mm10_v2_chr4_-_129640691_129640805	0.126708	Zic3	ENSMUST00000084264.5|Txlna|ENSMUSG00000053841.9|taxilin alpha
mm10_v2_chr17_+_84511832_84511913	0.123373	Zic3	ENSMUST00000047206.5|Plekhh2|ENSMUSG00000040852.5|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
mm10_v2_chrX_+_57053549_57053615	0.122674	Zic3	ENSMUST00000114751.2|Htatsf1|ENSMUSG00000067873.5|HIV TAT specific factor 1 	ENSMUST00000088652.5|Htatsf1|ENSMUSG00000067873.5|HIV TAT specific factor 1
mm10_v2_chr8_-_36249292_36249516	0.121792	Zic3	ENSMUST00000065297.5|Lonrf1|ENSMUSG00000039633.6|LON peptidase N-terminal domain and ring finger 1
mm10_v2_chr2_-_131187282_131187282	0.119495	Zic3	ENSMUST00000028801.1|Spef1|ENSMUSG00000027329.3|sperm flagellar 1
mm10_v2_chr14_-_78536854_78536879	0.11467	Zic3	ENSMUST00000022593.5|Akap11|ENSMUSG00000022016.9|A kinase (PRKA) anchor protein 11
mm10_v2_chr9_-_56418023_56418052	0.113946	Zic3	ENSMUST00000061552.8|C230081A13Rik|ENSMUSG00000074305.3|RIKEN cDNA C230081A13 gene
mm10_v2_chr4_+_43059028_43059080	0.113449	Zic3	ENSMUST00000163653.1|Unc13b|ENSMUSG00000028456.11|unc-13 homolog B (C. elegans) 	ENSMUST00000107952.2|Unc13b|ENSMUSG00000028456.11|unc-13 homolog B (C. elegans) 	ENSMUST00000107953.2|Unc13b|ENSMUSG00000028456.11|unc-13 homolog B (C. elegans)
mm10_v2_chr2_-_104816696_104816792	0.112372	Zic3	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr15_-_83149357_83149384	0.112054	Zic3	ENSMUST00000058793.6|Poldip3|ENSMUSG00000041815.7|polymerase (DNA-directed), delta interacting protein 3
mm10_v2_chr11_-_95310186_95310246	0.111647	Zic3	ENSMUST00000103159.3|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7 	ENSMUST00000107734.3|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7 	ENSMUST00000107733.3|Kat7|ENSMUSG00000038909.10|K(lysine) acetyltransferase 7
mm10_v2_chr4_-_133753611_133753666	0.109726	Zic3	ENSMUST00000145664.2|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like) 	ENSMUST00000105897.3|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like)
mm10_v2_chr14_+_31001383_31001407	0.109023	Zic3	ENSMUST00000168584.1|Glt8d1|ENSMUSG00000021916.9|glycosyltransferase 8 domain containing 1
mm10_v2_chr7_-_45694369_45694406	0.107164	Zic3	ENSMUST00000040636.6|Sec1|ENSMUSG00000040364.6|secretory blood group 1
mm10_v2_chr5_-_20882072_20882124	0.107015	Zic3	ENSMUST00000118174.1|Phtf2|ENSMUSG00000039987.9|putative homeodomain transcription factor 2
mm10_v2_chr11_+_95120089_95120125	0.100363	Zic3	ENSMUST00000092768.5|Dlx3|ENSMUSG00000001510.7|distal-less homeobox 3
mm10_v2_chr12_-_31499541_31499616	0.0984866	Zic3	ENSMUST00000101499.3|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000064240.6|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000085487.5|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1
mm10_v2_chrX_+_7790012_7790029	0.0982566	Zic3	ENSMUST00000140540.1|Gripap1|ENSMUSG00000031153.10|GRIP1 associated protein 1
mm10_v2_chr13_+_31806627_31806650	0.0979563	Zic3	ENSMUST00000062292.2|Foxc1|ENSMUSG00000050295.2|forkhead box C1
mm10_v2_chr14_+_31001414_31001464	0.0971873	Zic3	ENSMUST00000022476.7|Glt8d1|ENSMUSG00000021916.9|glycosyltransferase 8 domain containing 1
mm10_v2_chr1_-_75232093_75232093	0.0962851	Zic3	ENSMUST00000180101.1|A630095N17Rik|ENSMUSG00000096094.1|RIKEN cDNA A630095N17 gene
mm10_v2_chr13_-_96670838_96670936	0.0953849	Zic3	ENSMUST00000022176.8|Hmgcr|ENSMUSG00000021670.8|3-hydroxy-3-methylglutaryl-Coenzyme A reductase
mm10_v2_chrX_+_86191764_86191782	0.0951162	Zic3	ENSMUST00000026036.4|Nr0b1|ENSMUSG00000025056.4|nuclear receptor subfamily 0, group B, member 1
mm10_v2_chr6_-_51469836_51469854	0.09319	Zic3	ENSMUST00000090002.7|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1
mm10_v2_chr5_-_144026596_144026670	0.0926753	Zic3	ENSMUST00000031622.6|Ocm|ENSMUSG00000029618.7|oncomodulin 	ENSMUST00000110702.1|Ocm|ENSMUSG00000029618.7|oncomodulin
mm10_v2_chr12_-_112673944_112674086	0.0843866	Zic3	ENSMUST00000130342.1|Akt1|ENSMUSG00000001729.8|thymoma viral proto-oncogene 1
mm10_v2_chr11_-_100105626_100105645	0.0841162	Zic3	ENSMUST00000107416.2|Krt36|ENSMUSG00000020916.8|keratin 36
mm10_v2_chr9_-_35558522_35558548	0.081701	Zic3	ENSMUST00000034612.5|Ddx25|ENSMUSG00000032101.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25
mm10_v2_chr12_-_12941827_12941914	0.0797365	Zic3	ENSMUST00000043396.7|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr19_+_3767953_3768033	0.0783192	Zic3	ENSMUST00000113970.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr3_-_104511812_104511933	0.0777052	Zic3	ENSMUST00000046316.6|Lrig2|ENSMUSG00000032913.9|leucine-rich repeats and immunoglobulin-like domains 2
mm10_v2_chrX_+_73064787_73064787	0.0771827	Zic3	ENSMUST00000060418.6|Pnma3|ENSMUSG00000046287.6|paraneoplastic antigen MA3
mm10_v2_chr13_+_100651328_100651397	0.0734965	Zic3	ENSMUST00000022135.8|Taf9|ENSMUSG00000078941.3|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000084721.6|Taf9|ENSMUSG00000052293.8|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr17_-_56935388_56935504	0.0729042	Zic3	ENSMUST00000025053.8|Mllt1|ENSMUSG00000024212.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
mm10_v2_chr2_+_119742306_119742337	0.0703638	Zic3	ENSMUST00000028758.7|Itpka|ENSMUSG00000027296.7|inositol 1,4,5-trisphosphate 3-kinase A
mm10_v2_chr7_-_79386943_79387027	0.0686525	Zic3	ENSMUST00000053718.8|Rlbp1|ENSMUSG00000039194.9|retinaldehyde binding protein 1 	ENSMUST00000179243.1|Rlbp1|ENSMUSG00000039194.9|retinaldehyde binding protein 1
mm10_v2_chr11_+_58665561_58665561	0.0658058	Zic3	ENSMUST00000072030.3|Olfr322|ENSMUSG00000063549.3|olfactory receptor 322
mm10_v2_chr3_-_83129246_83129246	0.065373	Zic3	ENSMUST00000047876.6|Gm10710|ENSMUSG00000074517.2|predicted gene 10710
mm10_v2_chr1_+_187608755_187608791	0.0653423	Zic3	ENSMUST00000127489.1|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr8_-_111522073_111522112	0.060047	Zic3	ENSMUST00000034437.6|Wdr59|ENSMUSG00000031959.8|WD repeat domain 59 	ENSMUST00000038193.7|Wdr59|ENSMUSG00000031959.8|WD repeat domain 59
mm10_v2_chr1_-_168431896_168431905	0.0599607	Zic3	ENSMUST00000176540.1|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chr4_+_99656299_99656340	0.0592083	Zic3	ENSMUST00000087285.3|Foxd3|ENSMUSG00000067261.3|forkhead box D3
mm10_v2_chr9_+_55149364_55149395	0.0583097	Zic3	ENSMUST00000121677.1|Ube2q2|ENSMUSG00000032307.10|ubiquitin-conjugating enzyme E2Q (putative) 2
mm10_v2_chr2_-_146511899_146511979	0.0569218	Zic3	ENSMUST00000131824.1|Ralgapa2|ENSMUSG00000037110.13|Ral GTPase activating protein, alpha subunit 2 (catalytic)
mm10_v2_chrY_-_1245685_1245752	0.0562845	Zic3	ENSMUST00000143286.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome 	ENSMUST00000137048.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome 	ENSMUST00000069309.7|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome 	ENSMUST00000139365.1|Uty|ENSMUSG00000068457.8|ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
mm10_v2_chr3_+_103279293_103279293	0.0558466	Zic3	ENSMUST00000029444.6|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33 	ENSMUST00000106860.1|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33
mm10_v2_chr15_-_33405976_33405976	0.0549963	Zic3	ENSMUST00000079057.6|1700084J12Rik|ENSMUSG00000058101.2|RIKEN cDNA 1700084J12 gene
mm10_v2_chr11_-_78497458_78497539	0.0543964	Zic3	ENSMUST00000108287.3|Sarm1|ENSMUSG00000050132.7|sterile alpha and HEAT/Armadillo motif containing 1
mm10_v2_chr16_+_32332238_32332266	0.0527482	Zic3	ENSMUST00000115151.3|Ubxn7|ENSMUSG00000053774.8|UBX domain protein 7
mm10_v2_chr9_-_106789130_106789213	0.0523474	Zic3	ENSMUST00000046502.5|Rad54l2|ENSMUSG00000040661.5|RAD54 like 2 (S. cerevisiae)
mm10_v2_chr6_-_146577825_146577839	0.0523325	Zic3	ENSMUST00000032427.8|Asun|ENSMUSG00000040250.8|asunder, spermatogenesis regulator
mm10_v2_chr10_-_26373956_26374088	0.052275	Zic3	ENSMUST00000105519.3|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila) 	ENSMUST00000040219.6|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila)
mm10_v2_chr4_-_152131865_152131886	0.0468275	Zic3	ENSMUST00000105653.1|Espn|ENSMUSG00000028943.11|espin
mm10_v2_chr15_+_43477213_43477270	0.0462097	Zic3	ENSMUST00000022962.6|Emc2|ENSMUSG00000022337.6|ER membrane protein complex subunit 2
mm10_v2_chr11_+_70615836_70615848	0.0457688	Zic3	ENSMUST00000180052.1|4930544D05Rik|ENSMUSG00000087279.4|RIKEN cDNA 4930544D05 gene
mm10_v2_chr4_-_53159885_53159900	0.0421217	Zic3	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr11_-_65269984_65270002	0.0416758	Zic3	ENSMUST00000108695.2|Myocd|ENSMUSG00000020542.12|myocardin
mm10_v2_chr8_+_106211016_106211043	0.0413275	Zic3	ENSMUST00000109297.1|Prmt7|ENSMUSG00000060098.5|protein arginine N-methyltransferase 7
mm10_v2_chr14_-_56811716_56811716	0.0409092	Zic3	ENSMUST00000039812.9|Zmym5|ENSMUSG00000040123.10|zinc finger, MYM-type 5 	ENSMUST00000111285.2|Zmym5|ENSMUSG00000040123.10|zinc finger, MYM-type 5
mm10_v2_chr18_+_37489465_37489465	0.0408565	Zic3	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr10_-_116473418_116473514	0.0408163	Zic3	ENSMUST00000087965.4|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4 	ENSMUST00000164271.1|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm10_v2_chr7_-_44257204_44257204	0.0393402	Zic3	ENSMUST00000012921.7|Acpt|ENSMUSG00000012777.8|acid phosphatase, testicular
mm10_v2_chr4_+_42735545_42735545	0.0384739	Zic3	ENSMUST00000068158.3|4930578G10Rik|ENSMUSG00000054885.5|RIKEN cDNA 4930578G10 gene
mm10_v2_chr11_-_65269941_65269954	0.0365652	Zic3	ENSMUST00000102635.3|Myocd|ENSMUSG00000020542.12|myocardin
mm10_v2_chr2_+_127363197_127363217	0.0355723	Zic3	ENSMUST00000104934.1|Adra2b|ENSMUSG00000058620.5|adrenergic receptor, alpha 2b
mm10_v2_chr1_+_50927511_50927543	0.0307197	Zic3	ENSMUST00000081851.3|Tmeff2|ENSMUSG00000026109.8|transmembrane protein with EGF-like and two follistatin-like domains 2
mm10_v2_chr8_-_121544315_121544333	0.0303031	Zic3	ENSMUST00000182460.1|1700018B08Rik|ENSMUSG00000031809.4|RIKEN cDNA 1700018B08 gene
mm10_v2_chr3_+_132684106_132684145	0.0299226	Zic3	ENSMUST00000169172.1|Tbck|ENSMUSG00000028030.6|TBC1 domain containing kinase 	ENSMUST00000029664.6|Tbck|ENSMUSG00000028030.6|TBC1 domain containing kinase
mm10_v2_chr15_-_43477036_43477036	0.0296451	Zic3	ENSMUST00000100683.2|Gm10373|ENSMUSG00000072592.2|predicted gene 10373
mm10_v2_chr1_-_152902628_152902669	0.0283112	Zic3	ENSMUST00000111836.2|Smg7|ENSMUSG00000042772.9|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) 	ENSMUST00000073441.6|Smg7|ENSMUSG00000042772.9|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm10_v2_chr9_+_85842852_85842880	0.0282385	Zic3	ENSMUST00000098500.3|Tpbg|ENSMUSG00000035274.7|trophoblast glycoprotein
mm10_v2_chrX_+_7789986_7790008	0.0279755	Zic3	ENSMUST00000136930.1|Gripap1|ENSMUSG00000031153.10|GRIP1 associated protein 1 	ENSMUST00000115675.2|Gripap1|ENSMUSG00000031153.10|GRIP1 associated protein 1 	ENSMUST00000101694.3|Gripap1|ENSMUSG00000031153.10|GRIP1 associated protein 1
mm10_v2_chr17_+_86963077_86963094	0.0257914	Zic3	ENSMUST00000024956.8|Rhoq|ENSMUSG00000024143.8|ras homolog gene family, member Q
mm10_v2_chr13_+_96542727_96542775	0.0256791	Zic3	ENSMUST00000077672.4|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 	ENSMUST00000109444.2|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm10_v2_chr6_+_61180313_61180400	0.0233773	Zic3	ENSMUST00000126214.1|Ccser1|ENSMUSG00000039578.10|coiled-coil serine rich 1
mm10_v2_chr7_-_75308373_75308386	0.0225697	Zic3	ENSMUST00000085164.5|Sv2b|ENSMUSG00000053025.7|synaptic vesicle glycoprotein 2 b
mm10_v2_chr9_+_114515697_114515697	0.0225458	Zic3	ENSMUST00000180393.1|C130032M10Rik|ENSMUSG00000097821.1|RIKEN cDNA C130032M10 gene
mm10_v2_chr2_+_70562007_70562042	0.0218469	Zic3	ENSMUST00000094934.4|Gad1|ENSMUSG00000070880.4|glutamate decarboxylase 1
mm10_v2_chr1_-_58586191_58586323	0.0211304	Zic3	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr7_-_47310241_47310241	0.0204573	Zic3	ENSMUST00000179005.1|Mrgprx3-ps|ENSMUSG00000094536.1|MAS-related GPR, member X3, pseudogene
mm10_v2_chr19_+_4192129_4192217	0.0186067	Zic3	ENSMUST00000046094.4|Ppp1ca|ENSMUSG00000040385.6|protein phosphatase 1, catalytic subunit, alpha isoform
mm10_v2_chr11_-_118248489_118248504	0.0174676	Zic3	ENSMUST00000100181.4|Cyth1|ENSMUSG00000017132.11|cytohesin 1
mm10_v2_chr1_+_171270321_171270360	0.0174604	Zic3	ENSMUST00000064272.3|B4galt3|ENSMUSG00000052423.8|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 	ENSMUST00000141999.1|B4galt3|ENSMUSG00000052423.8|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 	ENSMUST00000111313.3|B4galt3|ENSMUSG00000052423.8|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3
mm10_v2_chr2_-_120061436_120061436	0.0152456	Zic3	ENSMUST00000125737.1|Sptbn5|ENSMUSG00000074899.4|spectrin beta, non-erythrocytic 5
mm10_v2_chr11_-_94485331_94485356	0.0146971	Zic3	ENSMUST00000041705.7|Spata20|ENSMUSG00000020867.7|spermatogenesis associated 20
mm10_v2_chr11_-_70229677_70229761	0.0134333	Zic3	ENSMUST00000153449.1|Bcl6b|ENSMUSG00000000317.5|B cell CLL/lymphoma 6, member B 	ENSMUST00000000326.5|Bcl6b|ENSMUSG00000000317.5|B cell CLL/lymphoma 6, member B
mm10_v2_chr9_-_49486209_49486230	0.0126875	Zic3	ENSMUST00000055096.4|Ttc12|ENSMUSG00000040219.4|tetratricopeptide repeat domain 12
mm10_v2_chr5_+_93093428_93093457	0.0125482	Zic3	ENSMUST00000074733.7|Sept11|ENSMUSG00000058013.8|septin 11
mm10_v2_chr8_+_94601928_94602003	0.0076461	Zic3	ENSMUST00000060389.8|Rspry1|ENSMUSG00000050079.9|ring finger and SPRY domain containing 1 	ENSMUST00000121101.1|Rspry1|ENSMUSG00000050079.9|ring finger and SPRY domain containing 1
mm10_v2_chr4_-_129614254_129614280	0.00674864	Zic3	ENSMUST00000106037.2|Dcdc2b|ENSMUSG00000078552.4|doublecortin domain containing 2b 	ENSMUST00000179209.1|Dcdc2b|ENSMUSG00000078552.4|doublecortin domain containing 2b
mm10_v2_chr16_+_32673144_32673199	0.00301363	Zic3	ENSMUST00000115122.2|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000115120.1|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000131238.1|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000115121.2|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000152361.1|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2
mm10_v2_chr4_+_154964117_154964147	0.00133048	Zic3	ENSMUST00000030931.4|Pank4|ENSMUSG00000029056.7|pantothenate kinase 4 	ENSMUST00000070953.4|Pank4|ENSMUSG00000029056.7|pantothenate kinase 4
