mm10_v2_chr10_-_109010955_109010983	6.63768	UUGGUCC	ENSMUST00000105276.1|Syt1|ENSMUSG00000035864.8|synaptotagmin I 	ENSMUST00000064054.7|Syt1|ENSMUSG00000035864.8|synaptotagmin I
mm10_v2_chr1_+_166254095_166254156	4.6901	UUGGUCC	ENSMUST00000111416.1|Ildr2|ENSMUSG00000040612.8|immunoglobulin-like domain containing receptor 2
mm10_v2_chr15_-_34495180_34495276	3.69075	UUGGUCC	ENSMUST00000022946.5|Hrsp12|ENSMUSG00000022323.5|heat-responsive protein 12
mm10_v2_chr4_-_46991842_46991916	3.62921	UUGGUCC	ENSMUST00000107749.2|Gabbr2|ENSMUSG00000039809.9|gamma-aminobutyric acid (GABA) B receptor, 2
mm10_v2_chr15_+_87625214_87625230	3.40742	UUGGUCC	ENSMUST00000068088.6|Fam19a5|ENSMUSG00000054863.8|family with sequence similarity 19, member A5
mm10_v2_chr10_+_107271827_107271850	3.3551	UUGGUCC	ENSMUST00000020057.8|Lin7a|ENSMUSG00000019906.8|lin-7 homolog A (C. elegans) 	ENSMUST00000105280.3|Lin7a|ENSMUSG00000019906.8|lin-7 homolog A (C. elegans)
mm10_v2_chr11_+_75193783_75193864	3.18558	UUGGUCC	ENSMUST00000102514.3|Rtn4rl1|ENSMUSG00000045287.6|reticulon 4 receptor-like 1
mm10_v2_chr8_+_95352258_95352329	3.16221	UUGGUCC	ENSMUST00000034243.5|Mmp15|ENSMUSG00000031790.7|matrix metallopeptidase 15
mm10_v2_chr7_+_51879041_51879064	3.09736	UUGGUCC	ENSMUST00000107591.2|Gas2|ENSMUSG00000030498.8|growth arrest specific 2
mm10_v2_chr5_+_73491026_73491110	2.93248	UUGGUCC	ENSMUST00000063882.5|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) 	ENSMUST00000113558.1|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
mm10_v2_chr14_-_47189406_47189419	2.87321	UUGGUCC	ENSMUST00000089959.6|Gch1|ENSMUSG00000037580.9|GTP cyclohydrolase 1
mm10_v2_chr6_+_108828633_108828721	2.41854	UUGGUCC	ENSMUST00000089162.3|Edem1|ENSMUSG00000030104.7|ER degradation enhancer, mannosidase alpha-like 1
mm10_v2_chr10_-_114801364_114801364	2.33898	UUGGUCC	ENSMUST00000061632.7|Trhde|ENSMUSG00000050663.7|TRH-degrading enzyme
mm10_v2_chr1_-_65179058_65179181	2.30639	UUGGUCC	ENSMUST00000097709.4|Idh1|ENSMUSG00000025950.10|isocitrate dehydrogenase 1 (NADP+), soluble
mm10_v2_chr16_+_42907563_42907684	2.30412	UUGGUCC	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr11_-_86993682_86993707	2.28008	UUGGUCC	ENSMUST00000018571.4|Ypel2|ENSMUSG00000018427.7|yippee-like 2 (Drosophila)
mm10_v2_chr9_-_96752822_96752869	2.2664	UUGGUCC	ENSMUST00000152594.1|Zbtb38|ENSMUSG00000040433.10|zinc finger and BTB domain containing 38
mm10_v2_chr19_+_26605106_26605119	2.25446	UUGGUCC	ENSMUST00000025862.7|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENSMUST00000176030.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr6_-_59024470_59024549	2.24972	UUGGUCC	ENSMUST00000089860.5|Fam13a|ENSMUSG00000037709.7|family with sequence similarity 13, member A
mm10_v2_chr9_-_110743653_110743686	2.19981	UUGGUCC	ENSMUST00000166716.1|Pth1r|ENSMUSG00000032492.8|parathyroid hormone 1 receptor
mm10_v2_chr10_+_28074813_28074873	2.19953	UUGGUCC	ENSMUST00000166468.1|Ptprk|ENSMUSG00000019889.9|protein tyrosine phosphatase, receptor type, K
mm10_v2_chr11_+_16752203_16752215	2.18743	UUGGUCC	ENSMUST00000102884.3|Egfr|ENSMUSG00000020122.10|epidermal growth factor receptor 	ENSMUST00000020329.6|Egfr|ENSMUSG00000020122.10|epidermal growth factor receptor
mm10_v2_chr2_-_5714490_5714538	2.18657	UUGGUCC	ENSMUST00000044009.7|Camk1d|ENSMUSG00000039145.10|calcium/calmodulin-dependent protein kinase ID
mm10_v2_chr9_+_114731177_114731234	2.16654	UUGGUCC	ENSMUST00000035007.8|Cmtm6|ENSMUSG00000032434.8|CKLF-like MARVEL transmembrane domain containing 6
mm10_v2_chr3_-_89387132_89387189	2.13249	UUGGUCC	ENSMUST00000107433.1|Zbtb7b|ENSMUSG00000028042.9|zinc finger and BTB domain containing 7B
mm10_v2_chr4_+_97777606_97777632	2.11698	UUGGUCC	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr6_+_129533183_129533205	2.09875	UUGGUCC	ENSMUST00000032264.6|Gabarapl1|ENSMUSG00000030161.6|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm10_v2_chr18_-_35627223_35627249	2.06659	UUGGUCC	ENSMUST00000025212.5|Slc23a1|ENSMUSG00000024354.5|solute carrier family 23 (nucleobase transporters), member 1
mm10_v2_chr3_-_63964768_63964785	1.96057	UUGGUCC	ENSMUST00000029402.8|Slc33a1|ENSMUSG00000027822.10|solute carrier family 33 (acetyl-CoA transporter), member 1
mm10_v2_chr9_-_20815048_20815069	1.9402	UUGGUCC	ENSMUST00000004201.7|Col5a3|ENSMUSG00000004098.7|collagen, type V, alpha 3
mm10_v2_chr6_-_72617000_72617000	1.93054	UUGGUCC	ENSMUST00000070524.4|Tgoln1|ENSMUSG00000056429.4|trans-golgi network protein
mm10_v2_chr1_+_187997821_187997834	1.91242	UUGGUCC	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr15_-_91049823_91049948	1.89012	UUGGUCC	ENSMUST00000088614.5|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000100304.4|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000067205.8|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000109288.2|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000109287.2|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A
mm10_v2_chr13_+_89540636_89540678	1.87113	UUGGUCC	ENSMUST00000022108.7|Hapln1|ENSMUSG00000021613.8|hyaluronan and proteoglycan link protein 1
mm10_v2_chr6_+_91684061_91684132	1.87041	UUGGUCC	ENSMUST00000032185.7|Slc6a6|ENSMUSG00000030096.7|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm10_v2_chrX_-_162888426_162888473	1.83885	UUGGUCC	ENSMUST00000033723.3|Syap1|ENSMUSG00000031357.3|synapse associated protein 1
mm10_v2_chr11_-_97629685_97629716	1.83698	UUGGUCC	ENSMUST00000052281.4|E130012A19Rik|ENSMUSG00000043439.4|RIKEN cDNA E130012A19 gene
mm10_v2_chr8_+_40862379_40862578	1.82349	UUGGUCC	ENSMUST00000098816.3|Slc7a2|ENSMUSG00000031596.9|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 	ENSMUST00000057784.8|Slc7a2|ENSMUSG00000031596.9|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 	ENSMUST00000141505.1|Slc7a2|ENSMUSG00000031596.9|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
mm10_v2_chr9_+_44379490_44379513	1.82179	UUGGUCC	ENSMUST00000066601.6|Hyou1|ENSMUSG00000032115.7|hypoxia up-regulated 1
mm10_v2_chr13_-_24937585_24937691	1.81431	UUGGUCC	ENSMUST00000037615.6|Aldh5a1|ENSMUSG00000035936.6|aldhehyde dehydrogenase family 5, subfamily A1
mm10_v2_chr16_-_85901118_85901133	1.81051	UUGGUCC	ENSMUST00000023611.5|Adamts5|ENSMUSG00000022894.5|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)
mm10_v2_chr2_-_160872552_160872622	1.79915	UUGGUCC	ENSMUST00000103111.2|Zhx3|ENSMUSG00000035877.11|zinc fingers and homeoboxes 3
mm10_v2_chr18_+_53862087_53862143	1.78993	UUGGUCC	ENSMUST00000069597.6|Csnk1g3|ENSMUSG00000073563.2|casein kinase 1, gamma 3
mm10_v2_chr3_-_131344892_131344940	1.77819	UUGGUCC	ENSMUST00000090246.4|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2 	ENSMUST00000126569.1|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2
mm10_v2_chr11_+_21239279_21239302	1.76342	UUGGUCC	ENSMUST00000006221.7|Vps54|ENSMUSG00000020128.9|vacuolar protein sorting 54 (yeast) 	ENSMUST00000109578.1|Vps54|ENSMUSG00000020128.9|vacuolar protein sorting 54 (yeast)
mm10_v2_chr4_-_114987220_114987256	1.75561	UUGGUCC	ENSMUST00000030491.8|Cmpk1|ENSMUSG00000028719.8|cytidine monophosphate (UMP-CMP) kinase 1
mm10_v2_chr1_+_191717834_191717904	1.7526	UUGGUCC	ENSMUST00000110855.1|Lpgat1|ENSMUSG00000026623.10|lysophosphatidylglycerol acyltransferase 1 	ENSMUST00000133076.1|Lpgat1|ENSMUSG00000026623.10|lysophosphatidylglycerol acyltransferase 1
mm10_v2_chr12_-_75735729_75735736	1.63735	UUGGUCC	ENSMUST00000021450.4|Sgpp1|ENSMUSG00000021054.5|sphingosine-1-phosphate phosphatase 1
mm10_v2_chr14_+_118937925_118937992	1.60227	UUGGUCC	ENSMUST00000022734.7|Dnajc3|ENSMUSG00000022136.7|DnaJ (Hsp40) homolog, subfamily C, member 3
mm10_v2_chr9_+_123529843_123529882	1.58348	UUGGUCC	ENSMUST00000026270.7|Sacm1l|ENSMUSG00000025240.8|SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)
mm10_v2_chr1_-_106796687_106796728	1.47574	UUGGUCC	ENSMUST00000094646.5|Vps4b|ENSMUSG00000009907.11|vacuolar protein sorting 4b (yeast)
mm10_v2_chr9_-_48835932_48835962	1.46953	UUGGUCC	ENSMUST00000093852.3|Zbtb16|ENSMUSG00000066687.4|zinc finger and BTB domain containing 16
mm10_v2_chr5_+_102481374_102481391	1.46326	UUGGUCC	ENSMUST00000094559.2|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24 	ENSMUST00000073302.5|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24
mm10_v2_chr17_-_12940317_12940402	1.45574	UUGGUCC	ENSMUST00000160378.1|Acat3|ENSMUSG00000062480.5|acetyl-Coenzyme A acetyltransferase 3 	ENSMUST00000043923.5|Acat3|ENSMUSG00000062480.5|acetyl-Coenzyme A acetyltransferase 3
mm10_v2_chr2_+_29802626_29802647	1.44937	UUGGUCC	ENSMUST00000080065.2|Slc27a4|ENSMUSG00000059316.2|solute carrier family 27 (fatty acid transporter), member 4
mm10_v2_chr11_+_102145530_102145549	1.43412	UUGGUCC	ENSMUST00000055409.5|Nags|ENSMUSG00000048217.5|N-acetylglutamate synthase
mm10_v2_chrX_-_51018011_51018032	1.42266	UUGGUCC	ENSMUST00000053593.7|Rap2c|ENSMUSG00000050029.7|RAP2C, member of RAS oncogene family
mm10_v2_chr11_-_90390895_90390926	1.39812	UUGGUCC	ENSMUST00000004051.7|Hlf|ENSMUSG00000003949.10|hepatic leukemia factor
mm10_v2_chr13_+_48261427_48261427	1.39693	UUGGUCC	ENSMUST00000021810.1|Id4|ENSMUSG00000021379.1|inhibitor of DNA binding 4
mm10_v2_chr4_-_129227883_129227923	1.39002	UUGGUCC	ENSMUST00000106051.1|C77080|ENSMUSG00000050390.6|expressed sequence C77080
mm10_v2_chr19_+_46761578_46761618	1.33702	UUGGUCC	ENSMUST00000077666.4|Cnnm2|ENSMUSG00000064105.6|cyclin M2 	ENSMUST00000099373.4|Cnnm2|ENSMUSG00000064105.6|cyclin M2
mm10_v2_chr5_+_65107551_65107582	1.33249	UUGGUCC	ENSMUST00000101192.2|Klhl5|ENSMUSG00000054920.6|kelch-like 5
mm10_v2_chr17_-_12960729_12960747	1.31331	UUGGUCC	ENSMUST00000007005.7|Acat2|ENSMUSG00000023832.7|acetyl-Coenzyme A acetyltransferase 2
mm10_v2_chr8_+_25518757_25518772	1.30459	UUGGUCC	ENSMUST00000178276.1|Fgfr1|ENSMUSG00000031565.11|fibroblast growth factor receptor 1 	ENSMUST00000179592.1|Fgfr1|ENSMUSG00000031565.11|fibroblast growth factor receptor 1
mm10_v2_chr11_-_72135721_72135778	1.30202	UUGGUCC	ENSMUST00000108508.2|Pitpnm3|ENSMUSG00000040543.10|PITPNM family member 3 	ENSMUST00000075258.6|Pitpnm3|ENSMUSG00000040543.10|PITPNM family member 3
mm10_v2_chr17_-_46487641_46487682	1.29065	UUGGUCC	ENSMUST00000047034.8|Ttbk1|ENSMUSG00000015599.8|tau tubulin kinase 1
mm10_v2_chr8_-_104395765_104395858	1.28902	UUGGUCC	ENSMUST00000179802.1|Cmtm4|ENSMUSG00000096188.1|CKLF-like MARVEL transmembrane domain containing 4
mm10_v2_chr7_-_127895578_127895647	1.26482	UUGGUCC	ENSMUST00000033074.6|Vkorc1|ENSMUSG00000096145.1|vitamin K epoxide reductase complex, subunit 1
mm10_v2_chr11_-_100397740_100397792	1.23565	UUGGUCC	ENSMUST00000001592.8|Jup|ENSMUSG00000001552.8|junction plakoglobin 	ENSMUST00000107403.1|Jup|ENSMUSG00000001552.8|junction plakoglobin
mm10_v2_chr14_-_70207637_70207675	1.22071	UUGGUCC	ENSMUST00000022682.5|Sorbs3|ENSMUSG00000022091.5|sorbin and SH3 domain containing 3
mm10_v2_chrX_+_129749830_129749976	1.20416	UUGGUCC	ENSMUST00000113320.2|Diap2|ENSMUSG00000034480.12|diaphanous homolog 2 (Drosophila)
mm10_v2_chr5_+_122707546_122707654	1.1386	UUGGUCC	ENSMUST00000081554.6|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000031429.7|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000139631.1|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4 	ENSMUST00000142664.1|P2rx4|ENSMUSG00000029470.9|purinergic receptor P2X, ligand-gated ion channel 4
mm10_v2_chr2_-_116065798_116065853	1.13585	UUGGUCC	ENSMUST00000110907.1|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000110908.2|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr2_-_60553303_60553317	1.12545	UUGGUCC	ENSMUST00000112525.2|Pla2r1|ENSMUSG00000054580.8|phospholipase A2 receptor 1 	ENSMUST00000067708.5|Pla2r1|ENSMUSG00000054580.8|phospholipase A2 receptor 1
mm10_v2_chr2_+_76675265_76675287	1.11851	UUGGUCC	ENSMUST00000111920.1|Plekha3|ENSMUSG00000002733.8|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
mm10_v2_chr6_-_85333412_85333441	1.11264	UUGGUCC	ENSMUST00000059034.6|Sfxn5|ENSMUSG00000033720.6|sideroflexin 5 	ENSMUST00000045846.5|Sfxn5|ENSMUSG00000033720.6|sideroflexin 5 	ENSMUST00000113788.1|Sfxn5|ENSMUSG00000033720.6|sideroflexin 5
mm10_v2_chr9_+_59578192_59578337	1.10391	UUGGUCC	ENSMUST00000118549.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000034840.3|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr19_-_3575708_3575756	1.08462	UUGGUCC	ENSMUST00000113997.2|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000025846.8|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000172362.1|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3
mm10_v2_chr8_+_71611024_71611157	1.08229	UUGGUCC	ENSMUST00000047903.8|Colgalt1|ENSMUSG00000034807.8|collagen beta(1-O)galactosyltransferase 1
mm10_v2_chr16_-_56717446_56717457	1.05759	UUGGUCC	ENSMUST00000065515.7|Tfg|ENSMUSG00000022757.12|Trk-fused gene
mm10_v2_chr18_-_38601268_38601355	1.02439	UUGGUCC	ENSMUST00000025295.6|Spry4|ENSMUSG00000024427.6|sprouty homolog 4 (Drosophila)
mm10_v2_chr6_+_14901344_14901364	1.01774	UUGGUCC	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr16_-_10313940_10313968	0.984656	UUGGUCC	ENSMUST00000078357.4|Emp2|ENSMUSG00000022505.8|epithelial membrane protein 2
mm10_v2_chr4_-_82505749_82505802	0.960075	UUGGUCC	ENSMUST00000107245.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107246.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr6_+_114282635_114282817	0.941304	UUGGUCC	ENSMUST00000032454.5|Slc6a1|ENSMUSG00000030310.8|solute carrier family 6 (neurotransmitter transporter, GABA), member 1
mm10_v2_chr11_+_97799565_97799581	0.93728	UUGGUCC	ENSMUST00000043843.5|Lasp1|ENSMUSG00000038366.9|LIM and SH3 protein 1
mm10_v2_chr14_-_31830402_31830440	0.925378	UUGGUCC	ENSMUST00000014640.7|Ankrd28|ENSMUSG00000014496.7|ankyrin repeat domain 28
mm10_v2_chr11_+_68968107_68968175	0.92121	UUGGUCC	ENSMUST00000102606.3|Slc25a35|ENSMUSG00000018740.8|solute carrier family 25, member 35 	ENSMUST00000018884.5|Slc25a35|ENSMUSG00000018740.8|solute carrier family 25, member 35
mm10_v2_chr12_-_54656496_54656572	0.913022	UUGGUCC	ENSMUST00000056228.6|Sptssa|ENSMUSG00000044408.6|serine palmitoyltransferase, small subunit A
mm10_v2_chr1_-_136960427_136960494	0.904724	UUGGUCC	ENSMUST00000027649.7|Nr5a2|ENSMUSG00000026398.8|nuclear receptor subfamily 5, group A, member 2
mm10_v2_chrX_-_56598069_56598107	0.900405	UUGGUCC	ENSMUST00000059899.2|Mmgt1|ENSMUSG00000061273.3|membrane magnesium transporter 1
mm10_v2_chr11_+_28853189_28853259	0.898632	UUGGUCC	ENSMUST00000020759.5|Efemp1|ENSMUSG00000020467.9|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm10_v2_chr13_+_104109737_104109746	0.890563	UUGGUCC	ENSMUST00000044385.7|Sgtb|ENSMUSG00000042743.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
mm10_v2_chr3_+_53041517_53041583	0.875434	UUGGUCC	ENSMUST00000059562.7|Lhfp|ENSMUSG00000048332.7|lipoma HMGIC fusion partner 	ENSMUST00000147139.1|Lhfp|ENSMUSG00000048332.7|lipoma HMGIC fusion partner
mm10_v2_chr10_+_52417532_52417580	0.86909	UUGGUCC	ENSMUST00000023830.8|Nus1|ENSMUSG00000023068.8|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
mm10_v2_chr19_-_4439388_4439450	0.864572	UUGGUCC	ENSMUST00000117462.1|Rhod|ENSMUSG00000041845.4|ras homolog gene family, member D 	ENSMUST00000048197.3|Rhod|ENSMUSG00000041845.4|ras homolog gene family, member D
mm10_v2_chr12_+_49382791_49382883	0.856336	UUGGUCC	ENSMUST00000179669.1|Foxg1|ENSMUSG00000020950.9|forkhead box G1
mm10_v2_chr14_+_30825580_30825640	0.85227	UUGGUCC	ENSMUST00000006701.5|Tmem110|ENSMUSG00000006526.5|transmembrane protein 110
mm10_v2_chr8_+_107293463_107293483	0.84753	UUGGUCC	ENSMUST00000169453.1|Nfat5|ENSMUSG00000003847.10|nuclear factor of activated T cells 5
mm10_v2_chr11_-_69369377_69369415	0.832705	UUGGUCC	ENSMUST00000092971.6|Chd3|ENSMUSG00000018474.11|chromodomain helicase DNA binding protein 3 	ENSMUST00000108661.1|Chd3|ENSMUSG00000018474.11|chromodomain helicase DNA binding protein 3
mm10_v2_chr10_+_106470281_106470367	0.832383	UUGGUCC	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr19_+_29101375_29101438	0.800923	UUGGUCC	ENSMUST00000064393.5|Rcl1|ENSMUSG00000024785.6|RNA terminal phosphate cyclase-like 1
mm10_v2_chr7_-_45459839_45459884	0.794423	UUGGUCC	ENSMUST00000094434.4|Ftl1|ENSMUSG00000050708.8|ferritin light chain 1
mm10_v2_chr12_+_80463095_80463179	0.793598	UUGGUCC	ENSMUST00000038185.8|Exd2|ENSMUSG00000032705.8|exonuclease 3'-5' domain containing 2
mm10_v2_chr2_+_109890846_109890882	0.792067	UUGGUCC	ENSMUST00000028583.7|Lin7c|ENSMUSG00000027162.7|lin-7 homolog C (C. elegans)
mm10_v2_chr8_-_3279606_3279622	0.784433	UUGGUCC	ENSMUST00000091291.4|Insr|ENSMUSG00000005534.9|insulin receptor
mm10_v2_chr5_+_120431770_120431905	0.781575	UUGGUCC	ENSMUST00000031591.7|Lhx5|ENSMUSG00000029595.7|LIM homeobox protein 5
mm10_v2_chr17_-_26508463_26508519	0.77594	UUGGUCC	ENSMUST00000025025.6|Dusp1|ENSMUSG00000024190.6|dual specificity phosphatase 1
mm10_v2_chr11_+_87592145_87592229	0.773199	UUGGUCC	ENSMUST00000103179.3|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4 	ENSMUST00000092802.5|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4 	ENSMUST00000146871.1|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4
mm10_v2_chr13_+_31806627_31806650	0.771634	UUGGUCC	ENSMUST00000062292.2|Foxc1|ENSMUSG00000050295.2|forkhead box C1
mm10_v2_chr5_+_63649335_63649451	0.762328	UUGGUCC	ENSMUST00000159584.1|3110047P20Rik|ENSMUSG00000090061.3|RIKEN cDNA 3110047P20 gene
mm10_v2_chrX_+_140664908_140665072	0.753015	UUGGUCC	ENSMUST00000112990.1|Mid2|ENSMUSG00000000266.5|midline 2 	ENSMUST00000112988.1|Mid2|ENSMUSG00000000266.5|midline 2
mm10_v2_chr15_-_103340085_103340100	0.737247	UUGGUCC	ENSMUST00000168828.1|Zfp385a|ENSMUSG00000000552.9|zinc finger protein 385A
mm10_v2_chr3_-_116007399_116007411	0.732349	UUGGUCC	ENSMUST00000067485.3|Slc30a7|ENSMUSG00000054414.3|solute carrier family 30 (zinc transporter), member 7
mm10_v2_chr12_-_45074112_45074306	0.722489	UUGGUCC	ENSMUST00000120531.1|Stxbp6|ENSMUSG00000046314.9|syntaxin binding protein 6 (amisyn) 	ENSMUST00000143376.1|Stxbp6|ENSMUSG00000046314.9|syntaxin binding protein 6 (amisyn)
mm10_v2_chr2_-_28916412_28916440	0.718644	UUGGUCC	ENSMUST00000050776.2|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila) 	ENSMUST00000113849.1|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila)
mm10_v2_chr10_+_24595623_24595780	0.713383	UUGGUCC	ENSMUST00000176228.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor 	ENSMUST00000129142.1|Ctgf|ENSMUSG00000019997.5|connective tissue growth factor
mm10_v2_chr3_-_100685431_100685503	0.700325	UUGGUCC	ENSMUST00000008907.7|Man1a2|ENSMUSG00000008763.10|mannosidase, alpha, class 1A, member 2
mm10_v2_chr6_-_35539765_35539888	0.695297	UUGGUCC	ENSMUST00000031866.5|Mtpn|ENSMUSG00000029840.5|myotrophin
mm10_v2_chr13_+_54621780_54621793	0.691531	UUGGUCC	ENSMUST00000126071.1|Faf2|ENSMUSG00000025873.9|Fas associated factor family member 2
mm10_v2_chr13_+_3538075_3538150	0.682369	UUGGUCC	ENSMUST00000059515.6|Gdi2|ENSMUSG00000021218.9|guanosine diphosphate (GDP) dissociation inhibitor 2
mm10_v2_chr18_-_25753852_25753983	0.673225	UUGGUCC	ENSMUST00000025117.6|Celf4|ENSMUSG00000024268.9|CUGBP, Elav-like family member 4 	ENSMUST00000115816.2|Celf4|ENSMUSG00000024268.9|CUGBP, Elav-like family member 4
mm10_v2_chr9_-_120023558_120023598	0.672882	UUGGUCC	ENSMUST00000111635.2|Xirp1|ENSMUSG00000079243.2|xin actin-binding repeat containing 1
mm10_v2_chr13_+_92844750_92844790	0.658839	UUGGUCC	ENSMUST00000076169.3|Mtx3|ENSMUSG00000021704.7|metaxin 3
mm10_v2_chrX_-_95166307_95166539	0.656573	UUGGUCC	ENSMUST00000113873.2|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113876.2|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113885.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113883.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000182001.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113882.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113878.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000182562.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9
mm10_v2_chr3_+_9250602_9250602	0.653318	UUGGUCC	ENSMUST00000155203.1|Zbtb10|ENSMUSG00000069114.8|zinc finger and BTB domain containing 10
mm10_v2_chr15_-_81858317_81858328	0.622718	UUGGUCC	ENSMUST00000050467.7|Tob2|ENSMUSG00000048546.7|transducer of ERBB2, 2
mm10_v2_chrX_-_165327376_165327421	0.62122	UUGGUCC	ENSMUST00000058787.8|Glra2|ENSMUSG00000018589.8|glycine receptor, alpha 2 subunit
mm10_v2_chr16_-_28445227_28445395	0.615761	UUGGUCC	ENSMUST00000100024.1|Fgf12|ENSMUSG00000022523.9|fibroblast growth factor 12
mm10_v2_chr7_+_138846335_138846371	0.614214	UUGGUCC	ENSMUST00000041097.6|Ppp2r2d|ENSMUSG00000041769.7|protein phosphatase 2, regulatory subunit B, delta isoform
mm10_v2_chr14_+_62837679_62837726	0.611344	UUGGUCC	ENSMUST00000014691.8|Wdfy2|ENSMUSG00000014547.9|WD repeat and FYVE domain containing 2
mm10_v2_chr2_+_128818104_128818135	0.603971	UUGGUCC	ENSMUST00000110325.1|Tmem87b|ENSMUSG00000014353.8|transmembrane protein 87B
mm10_v2_chr17_+_42315947_42315947	0.603606	UUGGUCC	ENSMUST00000048691.4|Ptchd4|ENSMUSG00000042256.4|patched domain containing 4
mm10_v2_chr9_-_78481724_78481751	0.602332	UUGGUCC	ENSMUST00000042235.8|Eef1a1|ENSMUSG00000037742.8|eukaryotic translation elongation factor 1 alpha 1
mm10_v2_chr4_+_128993224_128993290	0.581947	UUGGUCC	ENSMUST00000030583.6|Ak2|ENSMUSG00000028792.8|adenylate kinase 2 	ENSMUST00000102604.4|Ak2|ENSMUSG00000028792.8|adenylate kinase 2
mm10_v2_chr6_-_88518760_88518905	0.581527	UUGGUCC	ENSMUST00000032168.5|Sec61a1|ENSMUSG00000030082.8|Sec61 alpha 1 subunit (S. cerevisiae)
mm10_v2_chr9_+_109931458_109931488	0.572665	UUGGUCC	ENSMUST00000072772.5|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4 	ENSMUST00000035055.8|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4
mm10_v2_chr7_+_122067164_122067216	0.565233	UUGGUCC	ENSMUST00000033158.4|Ubfd1|ENSMUSG00000030870.6|ubiquitin family domain containing 1
mm10_v2_chr15_+_102406143_102406380	0.552027	UUGGUCC	ENSMUST00000170884.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000165924.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000163709.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000001326.6|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr6_-_90810118_90810160	0.546251	UUGGUCC	ENSMUST00000101151.3|Iqsec1|ENSMUSG00000034312.7|IQ motif and Sec7 domain 1
mm10_v2_chr15_-_58076183_58076245	0.542433	UUGGUCC	ENSMUST00000177504.2|9130401M01Rik|ENSMUSG00000022362.7|RIKEN cDNA 9130401M01 gene 	ENSMUST00000176076.1|9130401M01Rik|ENSMUSG00000022362.7|RIKEN cDNA 9130401M01 gene 	ENSMUST00000177176.1|9130401M01Rik|ENSMUSG00000022362.7|RIKEN cDNA 9130401M01 gene 	ENSMUST00000177276.1|Zhx1|ENSMUSG00000022361.8|zinc fingers and homeoboxes 1 	ENSMUST00000175805.2|Zhx1|ENSMUSG00000022361.8|zinc fingers and homeoboxes 1
mm10_v2_chr4_-_19570073_19570117	0.526249	UUGGUCC	ENSMUST00000029885.4|Cpne3|ENSMUSG00000028228.5|copine III
mm10_v2_chr3_+_89773562_89773642	0.516084	UUGGUCC	ENSMUST00000038356.8|Ube2q1|ENSMUSG00000042572.8|ubiquitin-conjugating enzyme E2Q (putative) 1
mm10_v2_chr13_+_54503779_54503804	0.512034	UUGGUCC	ENSMUST00000121401.1|Simc1|ENSMUSG00000043183.12|SUMO-interacting motifs containing 1 	ENSMUST00000118072.1|Simc1|ENSMUSG00000043183.12|SUMO-interacting motifs containing 1 	ENSMUST00000159721.1|Simc1|ENSMUSG00000043183.12|SUMO-interacting motifs containing 1
mm10_v2_chr3_-_144570136_144570227	0.507312	UUGGUCC	ENSMUST00000043325.7|Hs2st1|ENSMUSG00000040151.8|heparan sulfate 2-O-sulfotransferase 1
mm10_v2_chr8_-_71671723_71671772	0.50488	UUGGUCC	ENSMUST00000177517.1|Unc13a|ENSMUSG00000034799.10|unc-13 homolog A (C. elegans) 	ENSMUST00000030170.8|Unc13a|ENSMUSG00000034799.10|unc-13 homolog A (C. elegans)
mm10_v2_chr7_-_127273919_127274036	0.503157	UUGGUCC	ENSMUST00000082428.3|Sephs2|ENSMUSG00000049091.5|selenophosphate synthetase 2
mm10_v2_chr6_+_53573364_53573394	0.501884	UUGGUCC	ENSMUST00000047450.7|Creb5|ENSMUSG00000053007.6|cAMP responsive element binding protein 5
mm10_v2_chr10_+_36507013_36507026	0.50045	UUGGUCC	ENSMUST00000168572.1|Hs3st5|ENSMUSG00000044499.5|heparan sulfate (glucosamine) 3-O-sulfotransferase 5
mm10_v2_chr13_-_38528412_38528490	0.487684	UUGGUCC	ENSMUST00000035988.8|Txndc5|ENSMUSG00000038991.10|thioredoxin domain containing 5
mm10_v2_chr7_+_139085984_139086048	0.476723	UUGGUCC	ENSMUST00000026551.8|Dpysl4|ENSMUSG00000025478.9|dihydropyrimidinase-like 4
mm10_v2_chr14_-_16575456_16575501	0.47283	UUGGUCC	ENSMUST00000063750.6|Rarb|ENSMUSG00000017491.8|retinoic acid receptor, beta
mm10_v2_chrX_-_43167817_43167838	0.470002	UUGGUCC	ENSMUST00000115058.1|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1 	ENSMUST00000115059.1|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1
mm10_v2_chr1_-_21079162_21079243	0.467712	UUGGUCC	ENSMUST00000037998.4|Tram2|ENSMUSG00000041779.4|translocating chain-associating membrane protein 2
mm10_v2_chr2_-_63184253_63184292	0.463975	UUGGUCC	ENSMUST00000075052.3|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7 	ENSMUST00000112454.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr1_-_59670812_59670834	0.457085	UUGGUCC	ENSMUST00000091374.2|Sumo1|ENSMUSG00000026021.9|SMT3 suppressor of mif two 3 homolog 1 (yeast)
mm10_v2_chr16_-_57754707_57754737	0.454687	UUGGUCC	ENSMUST00000089332.4|Col8a1|ENSMUSG00000068196.4|collagen, type VIII, alpha 1
mm10_v2_chr18_+_36281069_36281151	0.451043	UUGGUCC	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr19_+_8741413_8741461	0.433348	UUGGUCC	ENSMUST00000176381.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A
mm10_v2_chr5_+_14514918_14514951	0.424055	UUGGUCC	ENSMUST00000030691.10|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein) 	ENSMUST00000182407.1|Pclo|ENSMUSG00000061601.9|piccolo (presynaptic cytomatrix protein)
mm10_v2_chr9_+_122117338_122117367	0.415272	UUGGUCC	ENSMUST00000120173.1|Snrk|ENSMUSG00000038145.10|SNF related kinase 	ENSMUST00000134949.1|Snrk|ENSMUSG00000038145.10|SNF related kinase 	ENSMUST00000119215.1|Snrk|ENSMUSG00000038145.10|SNF related kinase
mm10_v2_chr1_-_60566708_60566769	0.414879	UUGGUCC	ENSMUST00000027168.5|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 	ENSMUST00000090293.4|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 	ENSMUST00000140485.1|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
mm10_v2_chr1_+_131827977_131828019	0.414782	UUGGUCC	ENSMUST00000086559.6|Slc41a1|ENSMUSG00000013275.9|solute carrier family 41, member 1
mm10_v2_chr6_+_30401866_30401965	0.413641	UUGGUCC	ENSMUST00000068240.6|Klhdc10|ENSMUSG00000029775.8|kelch domain containing 10 	ENSMUST00000068259.6|Klhdc10|ENSMUSG00000029775.8|kelch domain containing 10
mm10_v2_chr19_-_60581013_60581025	0.411226	UUGGUCC	ENSMUST00000111460.3|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1 	ENSMUST00000081790.7|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1 	ENSMUST00000166712.1|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1
mm10_v2_chr11_-_20741447_20741524	0.40424	UUGGUCC	ENSMUST00000177543.1|Aftph|ENSMUSG00000049659.9|aftiphilin
mm10_v2_chr13_-_100833369_100833445	0.396266	UUGGUCC	ENSMUST00000067246.4|Slc30a5|ENSMUSG00000021629.9|solute carrier family 30 (zinc transporter), member 5
mm10_v2_chr6_+_88084473_88084527	0.394946	UUGGUCC	ENSMUST00000032143.6|Rpn1|ENSMUSG00000030062.6|ribophorin I
mm10_v2_chrX_-_152368680_152368740	0.394811	UUGGUCC	ENSMUST00000070316.5|Gpr173|ENSMUSG00000056679.7|G-protein coupled receptor 173
mm10_v2_chr1_-_14310198_14310218	0.390849	UUGGUCC	ENSMUST00000168081.2|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila) 	ENSMUST00000027066.6|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila)
mm10_v2_chr3_+_90248172_90248228	0.386044	UUGGUCC	ENSMUST00000015467.8|Slc39a1|ENSMUSG00000052310.9|solute carrier family 39 (zinc transporter), member 1
mm10_v2_chr2_+_138256530_138256615	0.383425	UUGGUCC	ENSMUST00000091556.5|Btbd3|ENSMUSG00000062098.5|BTB (POZ) domain containing 3
mm10_v2_chr10_-_53379816_53379858	0.380495	UUGGUCC	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr7_-_116443439_116443462	0.379306	UUGGUCC	ENSMUST00000170430.1|Pik3c2a|ENSMUSG00000030660.8|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm10_v2_chr5_-_36796722_36796772	0.376499	UUGGUCC	ENSMUST00000068795.3|Mrfap1|ENSMUSG00000055302.5|Morf4 family associated protein 1
mm10_v2_chr12_+_100199435_100199538	0.369693	UUGGUCC	ENSMUST00000110082.3|Calm1|ENSMUSG00000001175.7|calmodulin 1
mm10_v2_chr9_-_75559604_75559665	0.368874	UUGGUCC	ENSMUST00000072232.7|Tmod3|ENSMUSG00000058587.7|tropomodulin 3
mm10_v2_chrX_+_7762652_7762695	0.367741	UUGGUCC	ENSMUST00000077680.3|Tfe3|ENSMUSG00000000134.11|transcription factor E3 	ENSMUST00000079542.6|Tfe3|ENSMUSG00000000134.11|transcription factor E3 	ENSMUST00000115679.1|Tfe3|ENSMUSG00000000134.11|transcription factor E3 	ENSMUST00000137467.1|Tfe3|ENSMUSG00000000134.11|transcription factor E3
mm10_v2_chr10_-_91123955_91124059	0.367419	UUGGUCC	ENSMUST00000164505.1|Slc25a3|ENSMUSG00000061904.6|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 	ENSMUST00000170810.1|Slc25a3|ENSMUSG00000061904.6|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 	ENSMUST00000076694.6|Slc25a3|ENSMUSG00000061904.6|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
mm10_v2_chr2_-_162661075_162661147	0.354821	UUGGUCC	ENSMUST00000109442.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109445.2|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109443.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109441.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T
mm10_v2_chr11_+_103028327_103028368	0.348931	UUGGUCC	ENSMUST00000021314.7|Nmt1|ENSMUSG00000020936.8|N-myristoyltransferase 1
mm10_v2_chr13_+_41606216_41606216	0.344902	UUGGUCC	ENSMUST00000129449.1|Tmem170b|ENSMUSG00000087370.2|transmembrane protein 170B
mm10_v2_chr16_-_14159232_14159286	0.331693	UUGGUCC	ENSMUST00000090300.4|Marf1|ENSMUSG00000060657.7|meiosis arrest female 1
mm10_v2_chr11_-_120633594_120633605	0.32702	UUGGUCC	ENSMUST00000058162.7|Mafg|ENSMUSG00000051510.7|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
mm10_v2_chr3_+_22076644_22076681	0.32518	UUGGUCC	ENSMUST00000063988.8|Tbl1xr1|ENSMUSG00000027630.8|transducin (beta)-like 1X-linked receptor 1
mm10_v2_chr11_-_102407455_102407544	0.322621	UUGGUCC	ENSMUST00000107098.1|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39 	ENSMUST00000018821.2|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39
mm10_v2_chr5_+_3928267_3928300	0.320022	UUGGUCC	ENSMUST00000044492.8|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chr19_-_10240689_10240751	0.315522	UUGGUCC	ENSMUST00000088013.5|Myrf|ENSMUSG00000036098.9|myelin regulatory factor
mm10_v2_chr9_+_109038565_109038644	0.287744	UUGGUCC	ENSMUST00000112059.3|Shisa5|ENSMUSG00000025647.10|shisa homolog 5 (Xenopus laevis) 	ENSMUST00000026737.5|Shisa5|ENSMUSG00000025647.10|shisa homolog 5 (Xenopus laevis)
mm10_v2_chr4_+_85205417_85205535	0.283194	UUGGUCC	ENSMUST00000030212.8|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2 	ENSMUST00000107189.1|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2 	ENSMUST00000107184.1|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2
mm10_v2_chr5_+_67260565_67260692	0.281622	UUGGUCC	ENSMUST00000037918.5|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33 	ENSMUST00000162543.1|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33
mm10_v2_chr19_+_57361009_57361113	0.279711	UUGGUCC	ENSMUST00000036407.4|Fam160b1|ENSMUSG00000033478.4|family with sequence similarity 160, member B1
mm10_v2_chr19_-_7483241_7483289	0.279376	UUGGUCC	ENSMUST00000025667.6|Rtn3|ENSMUSG00000024758.8|reticulon 3 	ENSMUST00000065304.5|Rtn3|ENSMUSG00000024758.8|reticulon 3 	ENSMUST00000088171.4|Rtn3|ENSMUSG00000024758.8|reticulon 3
mm10_v2_chr7_-_19149189_19149273	0.277046	UUGGUCC	ENSMUST00000032566.1|Qpctl|ENSMUSG00000030407.1|glutaminyl-peptide cyclotransferase-like
mm10_v2_chr3_-_9004686_9004750	0.276836	UUGGUCC	ENSMUST00000120143.1|Tpd52|ENSMUSG00000027506.9|tumor protein D52
mm10_v2_chr6_+_110645572_110645588	0.270952	UUGGUCC	ENSMUST00000071076.6|Grm7|ENSMUSG00000056755.7|glutamate receptor, metabotropic 7 	ENSMUST00000172951.1|Grm7|ENSMUSG00000056755.7|glutamate receptor, metabotropic 7
mm10_v2_chr4_-_138396438_138396464	0.268326	UUGGUCC	ENSMUST00000105032.2|Fam43b|ENSMUSG00000078235.2|family with sequence similarity 43, member B
mm10_v2_chr7_+_87602544_87602544	0.267693	UUGGUCC	ENSMUST00000167164.1|Grm5|ENSMUSG00000049583.8|glutamate receptor, metabotropic 5 	ENSMUST00000107263.2|Grm5|ENSMUSG00000049583.8|glutamate receptor, metabotropic 5
mm10_v2_chr3_-_33082004_33082068	0.267137	UUGGUCC	ENSMUST00000108225.3|Pex5l|ENSMUSG00000027674.10|peroxisomal biogenesis factor 5-like
mm10_v2_chr14_+_111675113_111675119	0.262379	UUGGUCC	ENSMUST00000042767.7|Slitrk5|ENSMUSG00000033214.9|SLIT and NTRK-like family, member 5
mm10_v2_chr1_-_135313691_135313778	0.25829	UUGGUCC	ENSMUST00000134088.1|Timm17a|ENSMUSG00000062580.3|translocase of inner mitochondrial membrane 17a 	ENSMUST00000081104.3|Timm17a|ENSMUSG00000062580.3|translocase of inner mitochondrial membrane 17a
mm10_v2_chr2_+_90940397_90940543	0.252192	UUGGUCC	ENSMUST00000068726.6|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000005643.7|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000177642.1|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000111451.3|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000068747.7|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1
mm10_v2_chr4_-_129672712_129672774	0.252055	UUGGUCC	ENSMUST00000102590.4|Kpna6|ENSMUSG00000003731.7|karyopherin (importin) alpha 6
mm10_v2_chr5_+_139907943_139907943	0.250498	UUGGUCC	ENSMUST00000050519.6|Elfn1|ENSMUSG00000048988.7|leucine rich repeat and fibronectin type III, extracellular 1
mm10_v2_chr15_+_83779999_83780033	0.249696	UUGGUCC	ENSMUST00000046168.5|Mpped1|ENSMUSG00000041708.6|metallophosphoesterase domain containing 1
mm10_v2_chr6_+_56714891_56714951	0.247907	UUGGUCC	ENSMUST00000031805.8|Avl9|ENSMUSG00000029787.8|AVL9 homolog (S. cerevisiase)
mm10_v2_chr8_+_46739745_46739791	0.24729	UUGGUCC	ENSMUST00000034041.7|Irf2|ENSMUSG00000031627.7|interferon regulatory factor 2
mm10_v2_chr4_-_139833524_139833535	0.245004	UUGGUCC	ENSMUST00000030508.7|Pax7|ENSMUSG00000028736.7|paired box gene 7
mm10_v2_chr14_+_69767470_69767526	0.241941	UUGGUCC	ENSMUST00000022663.5|Tnfrsf10b|ENSMUSG00000022074.5|tumor necrosis factor receptor superfamily, member 10b
mm10_v2_chr5_+_32611171_32611245	0.240963	UUGGUCC	ENSMUST00000072311.6|Yes1|ENSMUSG00000014932.9|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1 	ENSMUST00000168707.2|Yes1|ENSMUSG00000014932.9|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1
mm10_v2_chr3_+_40745430_40745459	0.239502	UUGGUCC	ENSMUST00000077083.6|Hspa4l|ENSMUSG00000025757.7|heat shock protein 4 like
mm10_v2_chrX_+_12587791_12587846	0.236644	UUGGUCC	ENSMUST00000033313.2|Atp6ap2|ENSMUSG00000031007.2|ATPase, H+ transporting, lysosomal accessory protein 2
mm10_v2_chr16_+_32332238_32332266	0.235281	UUGGUCC	ENSMUST00000115151.3|Ubxn7|ENSMUSG00000053774.8|UBX domain protein 7
mm10_v2_chr14_-_63509092_63509092	0.229241	UUGGUCC	ENSMUST00000022522.8|Tdh|ENSMUSG00000021953.8|L-threonine dehydrogenase
mm10_v2_chr3_-_158562199_158562290	0.227738	UUGGUCC	ENSMUST00000106044.1|Lrrc7|ENSMUSG00000028176.7|leucine rich repeat containing 7
mm10_v2_chr15_+_100469034_100469075	0.22347	UUGGUCC	ENSMUST00000037001.8|Letmd1|ENSMUSG00000037353.8|LETM1 domain containing 1
mm10_v2_chr1_+_91053422_91053520	0.199584	UUGGUCC	ENSMUST00000097650.3|Lrrfip1|ENSMUSG00000026305.9|leucine rich repeat (in FLII) interacting protein 1 	ENSMUST00000068167.6|Lrrfip1|ENSMUSG00000026305.9|leucine rich repeat (in FLII) interacting protein 1 	ENSMUST00000097649.3|Lrrfip1|ENSMUSG00000026305.9|leucine rich repeat (in FLII) interacting protein 1
mm10_v2_chr3_+_16183177_16183206	0.189405	UUGGUCC	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr14_+_54883377_54883507	0.182853	UUGGUCC	ENSMUST00000022806.3|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000134077.1|Gm20521|ENSMUSG00000092232.1|predicted gene 20521 	ENSMUST00000172844.1|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000133397.2|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2
mm10_v2_chr19_-_24225015_24225033	0.182119	UUGGUCC	ENSMUST00000099558.4|Tjp2|ENSMUSG00000024812.9|tight junction protein 2
mm10_v2_chr10_-_43174521_43174569	0.178555	UUGGUCC	ENSMUST00000040275.7|Sobp|ENSMUSG00000038248.7|sine oculis-binding protein homolog (Drosophila)
mm10_v2_chr19_+_29522263_29522341	0.176409	UUGGUCC	ENSMUST00000043610.6|C030046E11Rik|ENSMUSG00000038658.9|RIKEN cDNA C030046E11 gene 	ENSMUST00000162184.1|C030046E11Rik|ENSMUSG00000038658.9|RIKEN cDNA C030046E11 gene
mm10_v2_chr1_+_36471590_36471620	0.173665	UUGGUCC	ENSMUST00000153128.1|Cnnm4|ENSMUSG00000037408.9|cyclin M4
mm10_v2_chr5_+_32136458_32136505	0.167174	UUGGUCC	ENSMUST00000031017.9|Fosl2|ENSMUSG00000029135.9|fos-like antigen 2
mm10_v2_chr5_+_142629537_142629593	0.16664	UUGGUCC	ENSMUST00000036872.9|Wipi2|ENSMUSG00000029578.9|WD repeat domain, phosphoinositide interacting 2 	ENSMUST00000110778.1|Wipi2|ENSMUSG00000029578.9|WD repeat domain, phosphoinositide interacting 2
mm10_v2_chr3_-_51277470_51277514	0.163395	UUGGUCC	ENSMUST00000108053.2|Elf2|ENSMUSG00000037174.12|E74-like factor 2 	ENSMUST00000108051.1|Elf2|ENSMUSG00000037174.12|E74-like factor 2
mm10_v2_chr9_+_98986365_98986412	0.159785	UUGGUCC	ENSMUST00000112911.2|Faim|ENSMUSG00000032463.4|Fas apoptotic inhibitory molecule 	ENSMUST00000035038.1|Faim|ENSMUSG00000032463.4|Fas apoptotic inhibitory molecule
mm10_v2_chr7_-_73541738_73541758	0.159215	UUGGUCC	ENSMUST00000169922.2|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr12_+_12262139_12262157	0.158853	UUGGUCC	ENSMUST00000069066.6|Fam49a|ENSMUSG00000020589.10|family with sequence similarity 49, member A 	ENSMUST00000069005.8|Fam49a|ENSMUSG00000020589.10|family with sequence similarity 49, member A
mm10_v2_chr11_+_115420138_115420182	0.155039	UUGGUCC	ENSMUST00000106533.1|Kctd2|ENSMUSG00000016940.12|potassium channel tetramerisation domain containing 2 	ENSMUST00000123345.1|Kctd2|ENSMUSG00000016940.12|potassium channel tetramerisation domain containing 2
mm10_v2_chr11_+_61022560_61022570	0.152816	UUGGUCC	ENSMUST00000089184.4|Kcnj12|ENSMUSG00000042529.8|potassium inwardly-rectifying channel, subfamily J, member 12
mm10_v2_chr11_+_76202007_76202030	0.15201	UUGGUCC	ENSMUST00000094014.3|Fam57a|ENSMUSG00000069808.7|family with sequence similarity 57, member A
mm10_v2_chr11_+_95120089_95120125	0.147936	UUGGUCC	ENSMUST00000092768.5|Dlx3|ENSMUSG00000001510.7|distal-less homeobox 3
mm10_v2_chr11_+_75679259_75679327	0.145222	UUGGUCC	ENSMUST00000017920.7|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108426.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108425.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000093115.3|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian)
mm10_v2_chr5_-_103100054_103100088	0.141034	UUGGUCC	ENSMUST00000112848.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr11_-_78386558_78386598	0.140789	UUGGUCC	ENSMUST00000108294.1|Foxn1|ENSMUSG00000002057.4|forkhead box N1
mm10_v2_chr5_-_113310729_113310788	0.140782	UUGGUCC	ENSMUST00000112325.1|Sgsm1|ENSMUSG00000042216.7|small G protein signaling modulator 1 	ENSMUST00000048112.6|Sgsm1|ENSMUSG00000042216.7|small G protein signaling modulator 1
mm10_v2_chr19_-_46573059_46573085	0.133198	UUGGUCC	ENSMUST00000026009.8|Arl3|ENSMUSG00000025035.8|ADP-ribosylation factor-like 3
mm10_v2_chr11_-_52282564_52282579	0.129483	UUGGUCC	ENSMUST00000086844.3|Tcf7|ENSMUSG00000000782.9|transcription factor 7, T cell specific
mm10_v2_chr16_-_4789984_4789995	0.126221	UUGGUCC	ENSMUST00000004173.5|Cdip1|ENSMUSG00000004071.6|cell death inducing Trp53 target 1
mm10_v2_chr5_-_20882072_20882124	0.122916	UUGGUCC	ENSMUST00000118174.1|Phtf2|ENSMUSG00000039987.9|putative homeodomain transcription factor 2
mm10_v2_chr10_-_107494719_107494742	0.122345	UUGGUCC	ENSMUST00000044210.3|Myf6|ENSMUSG00000035923.3|myogenic factor 6
mm10_v2_chr10_-_83648713_83648738	0.11826	UUGGUCC	ENSMUST00000020500.7|Appl2|ENSMUSG00000020263.8|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
mm10_v2_chrX_+_13280970_13281031	0.112898	UUGGUCC	ENSMUST00000000804.6|Ddx3x|ENSMUSG00000000787.6|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm10_v2_chr15_-_102257449_102257517	0.112009	UUGGUCC	ENSMUST00000043172.8|Rarg|ENSMUSG00000001288.8|retinoic acid receptor, gamma
mm10_v2_chr11_-_101466222_101466237	0.110143	UUGGUCC	ENSMUST00000040430.7|Vat1|ENSMUSG00000034993.7|vesicle amine transport protein 1 homolog (T californica)
mm10_v2_chr9_+_45117813_45117881	0.0954616	UUGGUCC	ENSMUST00000170998.1|Scn2b|ENSMUSG00000070304.5|sodium channel, voltage-gated, type II, beta 	ENSMUST00000093855.3|Scn2b|ENSMUSG00000070304.5|sodium channel, voltage-gated, type II, beta
mm10_v2_chr11_+_69088490_69088553	0.0950329	UUGGUCC	ENSMUST00000021273.6|Vamp2|ENSMUSG00000020894.10|vesicle-associated membrane protein 2 	ENSMUST00000117780.1|Vamp2|ENSMUSG00000020894.10|vesicle-associated membrane protein 2
mm10_v2_chr4_+_21727695_21727716	0.0934211	UUGGUCC	ENSMUST00000065928.4|Ccnc|ENSMUSG00000028252.14|cyclin C
mm10_v2_chr12_+_107488632_107488632	0.0876814	UUGGUCC	ENSMUST00000082269.2|3110018I06Rik|ENSMUSG00000060375.2|RIKEN cDNA 3110018I06 gene
mm10_v2_chr4_+_99715640_99715682	0.077223	UUGGUCC	ENSMUST00000097961.2|Alg6|ENSMUSG00000073792.5|asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) 	ENSMUST00000107004.2|Alg6|ENSMUSG00000073792.5|asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase) 	ENSMUST00000139799.1|Alg6|ENSMUSG00000073792.5|asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)
mm10_v2_chr2_-_130840091_130840150	0.0707576	UUGGUCC	ENSMUST00000044766.8|4930402H24Rik|ENSMUSG00000027309.12|RIKEN cDNA 4930402H24 gene 	ENSMUST00000138990.1|4930402H24Rik|ENSMUSG00000027309.12|RIKEN cDNA 4930402H24 gene 	ENSMUST00000120316.1|4930402H24Rik|ENSMUSG00000027309.12|RIKEN cDNA 4930402H24 gene 	ENSMUST00000110243.1|4930402H24Rik|ENSMUSG00000027309.12|RIKEN cDNA 4930402H24 gene
mm10_v2_chr9_+_98955525_98955607	0.0706709	UUGGUCC	ENSMUST00000051312.2|Foxl2|ENSMUSG00000050397.2|forkhead box L2
mm10_v2_chr3_-_119783262_119783388	0.0679557	UUGGUCC	ENSMUST00000029780.7|Ptbp2|ENSMUSG00000028134.7|polypyrimidine tract binding protein 2
mm10_v2_chr7_+_139894696_139894854	0.0629724	UUGGUCC	ENSMUST00000151421.1|Kndc1|ENSMUSG00000066129.8|kinase non-catalytic C-lobe domain (KIND) containing 1 	ENSMUST00000053445.9|Kndc1|ENSMUSG00000066129.8|kinase non-catalytic C-lobe domain (KIND) containing 1 	ENSMUST00000121839.1|Kndc1|ENSMUSG00000066129.8|kinase non-catalytic C-lobe domain (KIND) containing 1
mm10_v2_chr11_-_97744659_97744774	0.06291	UUGGUCC	ENSMUST00000018691.8|Pip4k2b|ENSMUSG00000018547.8|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
mm10_v2_chr5_+_65537209_65537233	0.0626081	UUGGUCC	ENSMUST00000142407.1|Ube2k|ENSMUSG00000029203.10|ubiquitin-conjugating enzyme E2K
mm10_v2_chr12_+_111166349_111166397	0.0566	UUGGUCC	ENSMUST00000117269.1|Traf3|ENSMUSG00000021277.10|TNF receptor-associated factor 3
mm10_v2_chr6_-_99266494_99266540	0.0527643	UUGGUCC	ENSMUST00000113326.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr7_-_28962265_28962340	0.0463811	UUGGUCC	ENSMUST00000068045.7|Actn4|ENSMUSG00000054808.7|actinin alpha 4
mm10_v2_chrX_-_74085586_74085652	0.0408013	UUGGUCC	ENSMUST00000123362.1|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2 	ENSMUST00000140399.1|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2 	ENSMUST00000100750.3|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2
mm10_v2_chr11_+_32642826_32642875	0.0401935	UUGGUCC	ENSMUST00000093205.6|Fbxw11|ENSMUSG00000020271.11|F-box and WD-40 domain protein 11 	ENSMUST00000076383.7|Fbxw11|ENSMUSG00000020271.11|F-box and WD-40 domain protein 11
mm10_v2_chr15_-_77842133_77842175	0.0400741	UUGGUCC	ENSMUST00000016771.6|Myh9|ENSMUSG00000022443.10|myosin, heavy polypeptide 9, non-muscle
mm10_v2_chr15_-_38078842_38078860	0.0365964	UUGGUCC	ENSMUST00000110336.2|Ubr5|ENSMUSG00000037487.6|ubiquitin protein ligase E3 component n-recognin 5
mm10_v2_chr15_-_93275151_93275178	0.0360291	UUGGUCC	ENSMUST00000057896.4|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1 	ENSMUST00000049484.6|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1
mm10_v2_chr11_-_5381734_5381745	0.0342524	UUGGUCC	ENSMUST00000172492.1|Znrf3|ENSMUSG00000041961.8|zinc and ring finger 3
mm10_v2_chr1_+_59912972_59913027	0.0285208	UUGGUCC	ENSMUST00000036540.5|Fam117b|ENSMUSG00000041040.6|family with sequence similarity 117, member B
mm10_v2_chrY_-_1286563_1286615	0.027176	UUGGUCC	ENSMUST00000091190.5|Ddx3y|ENSMUSG00000069045.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
mm10_v2_chr9_+_80066895_80066936	0.0204759	UUGGUCC	ENSMUST00000037484.8|Senp6|ENSMUSG00000034252.8|SUMO/sentrin specific peptidase 6 	ENSMUST00000176640.1|Senp6|ENSMUSG00000034252.8|SUMO/sentrin specific peptidase 6
mm10_v2_chr7_+_81057589_81057603	0.0114806	UUGGUCC	ENSMUST00000107348.1|Alpk3|ENSMUSG00000038763.11|alpha-kinase 3
mm10_v2_chr9_+_27790947_27790991	0.00269283	UUGGUCC	ENSMUST00000115243.2|Opcml|ENSMUSG00000062257.6|opioid binding protein/cell adhesion molecule-like
