mm10_v2_chr2_+_102658640_102658669	12.8308	UUGGCAA	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr14_+_37054818_37054853	8.76921	UUGGCAA	ENSMUST00000120052.1|Lrit1|ENSMUSG00000041044.9|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
mm10_v2_chr1_-_121328024_121328044	5.68914	UUGGCAA	ENSMUST00000003818.7|Insig2|ENSMUSG00000003721.8|insulin induced gene 2
mm10_v2_chr9_-_48605147_48605158	5.59586	UUGGCAA	ENSMUST00000034808.5|Nnmt|ENSMUSG00000032271.7|nicotinamide N-methyltransferase 	ENSMUST00000119426.1|Nnmt|ENSMUSG00000032271.7|nicotinamide N-methyltransferase
mm10_v2_chr6_-_72235559_72235618	5.55609	UUGGCAA	ENSMUST00000042646.7|Atoh8|ENSMUSG00000037621.7|atonal homolog 8 (Drosophila)
mm10_v2_chr12_-_98577940_98578046	4.86718	UUGGCAA	ENSMUST00000110113.1|Kcnk10|ENSMUSG00000033854.9|potassium channel, subfamily K, member 10
mm10_v2_chr15_-_86033777_86033777	4.86269	UUGGCAA	ENSMUST00000016172.7|Celsr1|ENSMUSG00000016028.9|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)
mm10_v2_chr7_-_81454751_81454764	4.8304	UUGGCAA	ENSMUST00000098331.3|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1 	ENSMUST00000178892.1|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1
mm10_v2_chr12_+_78226627_78226655	4.66127	UUGGCAA	ENSMUST00000110388.2|Gphn|ENSMUSG00000047454.5|gephyrin 	ENSMUST00000052472.4|Gphn|ENSMUSG00000047454.5|gephyrin
mm10_v2_chr7_+_87246649_87246661	4.59641	UUGGCAA	ENSMUST00000068829.5|Nox4|ENSMUSG00000030562.10|NADPH oxidase 4 	ENSMUST00000032781.7|Nox4|ENSMUSG00000030562.10|NADPH oxidase 4
mm10_v2_chr1_-_51915968_51916071	4.31774	UUGGCAA	ENSMUST00000046390.7|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr15_+_25843264_25843280	4.28226	UUGGCAA	ENSMUST00000022881.7|Fam134b|ENSMUSG00000022270.9|family with sequence similarity 134, member B
mm10_v2_chr16_+_13903152_13903211	4.26721	UUGGCAA	ENSMUST00000128757.1|Mpv17l|ENSMUSG00000022679.7|Mpv17 transgene, kidney disease mutant-like
mm10_v2_chr7_-_72306595_72306647	4.12547	UUGGCAA	ENSMUST00000079323.5|Mctp2|ENSMUSG00000032776.7|multiple C2 domains, transmembrane 2
mm10_v2_chr18_-_46728342_46728363	4.04192	UUGGCAA	ENSMUST00000035804.7|Cdo1|ENSMUSG00000033022.7|cysteine dioxygenase 1, cytosolic
mm10_v2_chr15_+_55112317_55112346	4.03178	UUGGCAA	ENSMUST00000096433.3|Deptor|ENSMUSG00000022419.9|DEP domain containing MTOR-interacting protein
mm10_v2_chr1_-_105356658_105356714	3.77674	UUGGCAA	ENSMUST00000058688.5|Rnf152|ENSMUSG00000047496.5|ring finger protein 152 	ENSMUST00000172299.1|Rnf152|ENSMUSG00000047496.5|ring finger protein 152
mm10_v2_chr15_+_57694651_57694686	3.68093	UUGGCAA	ENSMUST00000096430.4|Zhx2|ENSMUSG00000071757.4|zinc fingers and homeoboxes 2
mm10_v2_chr15_-_59082026_59082090	3.67762	UUGGCAA	ENSMUST00000080371.6|Mtss1|ENSMUSG00000022353.9|metastasis suppressor 1
mm10_v2_chr16_+_42907563_42907684	3.6402	UUGGCAA	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr18_+_64340225_64340364	3.63442	UUGGCAA	ENSMUST00000175965.2|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2 	ENSMUST00000115145.3|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2
mm10_v2_chr2_+_71981184_71981287	3.41913	UUGGCAA	ENSMUST00000090826.5|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4 	ENSMUST00000102698.3|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4
mm10_v2_chr3_-_63964768_63964785	3.38935	UUGGCAA	ENSMUST00000029402.8|Slc33a1|ENSMUSG00000027822.10|solute carrier family 33 (acetyl-CoA transporter), member 1
mm10_v2_chr4_-_155345696_155345799	3.37139	UUGGCAA	ENSMUST00000103178.4|Prkcz|ENSMUSG00000029053.10|protein kinase C, zeta
mm10_v2_chr6_-_47813512_47813528	3.35541	UUGGCAA	ENSMUST00000077290.7|Pdia4|ENSMUSG00000025823.8|protein disulfide isomerase associated 4
mm10_v2_chr12_+_40446050_40446099	3.35481	UUGGCAA	ENSMUST00000037488.6|Dock4|ENSMUSG00000035954.9|dedicator of cytokinesis 4
mm10_v2_chr15_-_97055942_97055964	3.18555	UUGGCAA	ENSMUST00000023101.3|Slc38a4|ENSMUSG00000022464.7|solute carrier family 38, member 4
mm10_v2_chr17_-_12675833_12675844	3.10397	UUGGCAA	ENSMUST00000024596.8|Slc22a1|ENSMUSG00000023829.8|solute carrier family 22 (organic cation transporter), member 1
mm10_v2_chr2_-_52676571_52676588	3.03583	UUGGCAA	ENSMUST00000178799.1|Cacnb4|ENSMUSG00000017412.9|calcium channel, voltage-dependent, beta 4 subunit
mm10_v2_chr8_-_64849818_64849861	3.02281	UUGGCAA	ENSMUST00000034017.7|Klhl2|ENSMUSG00000031605.7|kelch-like 2, Mayven
mm10_v2_chr10_+_41519493_41519516	3.01709	UUGGCAA	ENSMUST00000019962.8|Cd164|ENSMUSG00000019818.9|CD164 antigen
mm10_v2_chr11_-_119547744_119547759	3.00071	UUGGCAA	ENSMUST00000026670.4|Nptx1|ENSMUSG00000025582.4|neuronal pentraxin 1
mm10_v2_chr6_+_116264186_116264225	2.98775	UUGGCAA	ENSMUST00000036503.7|Zfand4|ENSMUSG00000042213.10|zinc finger, AN1-type domain 4 	ENSMUST00000112900.3|Zfand4|ENSMUSG00000042213.10|zinc finger, AN1-type domain 4
mm10_v2_chr2_+_155381808_155381884	2.98574	UUGGCAA	ENSMUST00000043237.7|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2 	ENSMUST00000174685.1|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2
mm10_v2_chrX_+_103356464_103356488	2.97418	UUGGCAA	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chr11_+_57801575_57801649	2.92595	UUGGCAA	ENSMUST00000020826.5|Sap30l|ENSMUSG00000020519.5|SAP30-like
mm10_v2_chr3_-_115715031_115715062	2.89403	UUGGCAA	ENSMUST00000055676.2|S1pr1|ENSMUSG00000045092.7|sphingosine-1-phosphate receptor 1
mm10_v2_chr6_+_54595111_54595243	2.88756	UUGGCAA	ENSMUST00000119706.1|Plekha8|ENSMUSG00000005225.9|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
mm10_v2_chrX_-_162643629_162643665	2.88542	UUGGCAA	ENSMUST00000112334.1|Reps2|ENSMUSG00000040855.9|RALBP1 associated Eps domain containing protein 2
mm10_v2_chr16_-_97922582_97922633	2.84262	UUGGCAA	ENSMUST00000170757.1|C2cd2|ENSMUSG00000045975.7|C2 calcium-dependent domain containing 2
mm10_v2_chr13_+_12565868_12565883	2.82678	UUGGCAA	ENSMUST00000071973.6|Ero1lb|ENSMUSG00000057069.6|ERO1-like beta (S. cerevisiae)
mm10_v2_chr11_-_121388186_121388267	2.81338	UUGGCAA	ENSMUST00000106107.2|Rab40b|ENSMUSG00000025170.7|Rab40b, member RAS oncogene family
mm10_v2_chr13_-_36734450_36734492	2.78205	UUGGCAA	ENSMUST00000037623.8|Nrn1|ENSMUSG00000039114.9|neuritin 1
mm10_v2_chr9_-_50727921_50728008	2.77581	UUGGCAA	ENSMUST00000118707.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000034566.8|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr5_+_130448801_130448830	2.67781	UUGGCAA	ENSMUST00000111288.2|Caln1|ENSMUSG00000060371.6|calneuron 1
mm10_v2_chr13_+_51100810_51100933	2.66795	UUGGCAA	ENSMUST00000095797.5|Spin1|ENSMUSG00000021395.10|spindlin 1
mm10_v2_chr18_+_84088077_84088178	2.65576	UUGGCAA	ENSMUST00000060223.2|Zadh2|ENSMUSG00000049090.2|zinc binding alcohol dehydrogenase, domain containing 2
mm10_v2_chr3_+_145758674_145758685	2.63701	UUGGCAA	ENSMUST00000029845.8|Ddah1|ENSMUSG00000028194.9|dimethylarginine dimethylaminohydrolase 1
mm10_v2_chr8_+_107150621_107150690	2.61127	UUGGCAA	ENSMUST00000034400.3|Cyb5b|ENSMUSG00000031924.3|cytochrome b5 type B
mm10_v2_chr10_+_29313500_29313594	2.57024	UUGGCAA	ENSMUST00000020034.4|Echdc1|ENSMUSG00000019883.4|enoyl Coenzyme A hydratase domain containing 1
mm10_v2_chr7_+_100706702_100706731	2.54106	UUGGCAA	ENSMUST00000049053.7|Fam168a|ENSMUSG00000029461.9|family with sequence similarity 168, member A
mm10_v2_chr3_+_121953213_121953295	2.53078	UUGGCAA	ENSMUST00000037958.7|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29 	ENSMUST00000128366.1|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29
mm10_v2_chr16_-_65562686_65562769	2.52432	UUGGCAA	ENSMUST00000004965.6|Chmp2b|ENSMUSG00000004843.6|charged multivesicular body protein 2B
mm10_v2_chr4_+_11156411_11156453	2.50486	UUGGCAA	ENSMUST00000029865.3|Trp53inp1|ENSMUSG00000028211.5|transformation related protein 53 inducible nuclear protein 1
mm10_v2_chr1_+_187997821_187997834	2.50039	UUGGCAA	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr9_-_42264226_42264300	2.47976	UUGGCAA	ENSMUST00000052725.7|Sc5d|ENSMUSG00000032018.7|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)
mm10_v2_chr1_+_7088917_7088993	2.47138	UUGGCAA	ENSMUST00000061280.10|Pcmtd1|ENSMUSG00000051285.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 	ENSMUST00000182114.1|Pcmtd1|ENSMUSG00000051285.11|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm10_v2_chr9_+_74861888_74861921	2.43496	UUGGCAA	ENSMUST00000056006.9|Onecut1|ENSMUSG00000043013.9|one cut domain, family member 1
mm10_v2_chr2_-_126933229_126933241	2.40696	UUGGCAA	ENSMUST00000028844.4|Sppl2a|ENSMUSG00000027366.6|signal peptide peptidase like 2A
mm10_v2_chr11_+_94211431_94211454	2.40418	UUGGCAA	ENSMUST00000041589.5|Tob1|ENSMUSG00000037573.5|transducer of ErbB-2.1
mm10_v2_chr15_+_32920723_32920826	2.40185	UUGGCAA	ENSMUST00000022871.5|Sdc2|ENSMUSG00000022261.5|syndecan 2
mm10_v2_chr4_+_41465134_41465159	2.39504	UUGGCAA	ENSMUST00000030154.6|Nudt2|ENSMUSG00000028443.6|nudix (nucleoside diphosphate linked moiety X)-type motif 2
mm10_v2_chr4_+_138454305_138454327	2.37025	UUGGCAA	ENSMUST00000050918.3|Camk2n1|ENSMUSG00000046447.3|calcium/calmodulin-dependent protein kinase II inhibitor 1
mm10_v2_chr11_-_12464804_12464845	2.34748	UUGGCAA	ENSMUST00000172919.1|Cobl|ENSMUSG00000020173.11|cordon-bleu WH2 repeat
mm10_v2_chr17_+_86167777_86167795	2.31624	UUGGCAA	ENSMUST00000097275.2|Prkce|ENSMUSG00000045038.8|protein kinase C, epsilon
mm10_v2_chr2_+_68117713_68117713	2.30501	UUGGCAA	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr2_-_73386396_73386572	2.30442	UUGGCAA	ENSMUST00000112044.1|Gpr155|ENSMUSG00000041762.10|G protein-coupled receptor 155 	ENSMUST00000112043.1|Gpr155|ENSMUSG00000041762.10|G protein-coupled receptor 155 	ENSMUST00000076463.5|Gpr155|ENSMUSG00000041762.10|G protein-coupled receptor 155
mm10_v2_chr2_-_80581234_80581266	2.28186	UUGGCAA	ENSMUST00000028386.5|Nckap1|ENSMUSG00000027002.7|NCK-associated protein 1
mm10_v2_chr6_-_124415037_124415078	2.20359	UUGGCAA	ENSMUST00000035861.5|Pex5|ENSMUSG00000005069.6|peroxisomal biogenesis factor 5 	ENSMUST00000112532.1|Pex5|ENSMUSG00000005069.6|peroxisomal biogenesis factor 5 	ENSMUST00000080557.5|Pex5|ENSMUSG00000005069.6|peroxisomal biogenesis factor 5
mm10_v2_chr17_-_85090204_85090275	2.19781	UUGGCAA	ENSMUST00000072406.3|Prepl|ENSMUSG00000024127.8|prolyl endopeptidase-like 	ENSMUST00000171795.1|Prepl|ENSMUSG00000024127.8|prolyl endopeptidase-like
mm10_v2_chr3_+_138374121_138374163	2.1908	UUGGCAA	ENSMUST00000171054.1|Adh6-ps1|ENSMUSG00000090306.1|alcohol dehydrogenase 6 (class V), pseudogene 1
mm10_v2_chr9_+_52047150_52047163	2.13215	UUGGCAA	ENSMUST00000163153.1|Rdx|ENSMUSG00000032050.10|radixin
mm10_v2_chr7_+_35119285_35119301	2.12538	UUGGCAA	ENSMUST00000042985.9|Cebpa|ENSMUSG00000034957.9|CCAAT/enhancer binding protein (C/EBP), alpha
mm10_v2_chr17_+_86753900_86753914	2.10669	UUGGCAA	ENSMUST00000024954.9|Epas1|ENSMUSG00000024140.9|endothelial PAS domain protein 1
mm10_v2_chr3_+_90248172_90248228	2.05578	UUGGCAA	ENSMUST00000015467.8|Slc39a1|ENSMUSG00000052310.9|solute carrier family 39 (zinc transporter), member 1
mm10_v2_chr7_-_90457167_90457229	2.05437	UUGGCAA	ENSMUST00000032844.5|Tmem126a|ENSMUSG00000030615.5|transmembrane protein 126A
mm10_v2_chr2_-_168734236_168734339	2.04689	UUGGCAA	ENSMUST00000109175.2|Atp9a|ENSMUSG00000027546.9|ATPase, class II, type 9A
mm10_v2_chr11_+_90249469_90249482	2.03386	UUGGCAA	ENSMUST00000004050.6|Mmd|ENSMUSG00000003948.10|monocyte to macrophage differentiation-associated
mm10_v2_chr1_+_191978247_191978259	2.02402	UUGGCAA	ENSMUST00000175680.1|Rd3|ENSMUSG00000049353.11|retinal degeneration 3
mm10_v2_chr6_+_97807014_97807067	2.01661	UUGGCAA	ENSMUST00000043637.7|Mitf|ENSMUSG00000035158.9|microphthalmia-associated transcription factor
mm10_v2_chr16_+_24393350_24393428	2.00158	UUGGCAA	ENSMUST00000038053.6|Lpp|ENSMUSG00000033306.8|LIM domain containing preferred translocation partner in lipoma
mm10_v2_chr5_+_30232581_30232680	1.99139	UUGGCAA	ENSMUST00000145167.1|Ept1|ENSMUSG00000075703.9|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
mm10_v2_chr9_+_14276301_14276347	1.98145	UUGGCAA	ENSMUST00000034507.7|Sesn3|ENSMUSG00000032009.7|sestrin 3
mm10_v2_chr3_+_63295815_63295872	1.93982	UUGGCAA	ENSMUST00000029400.1|Mme|ENSMUSG00000027820.7|membrane metallo endopeptidase
mm10_v2_chr1_+_33719863_33719901	1.9151	UUGGCAA	ENSMUST00000088287.3|Rab23|ENSMUSG00000004768.8|RAB23, member RAS oncogene family
mm10_v2_chr5_+_73491026_73491110	1.87295	UUGGCAA	ENSMUST00000063882.5|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) 	ENSMUST00000113558.1|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
mm10_v2_chr6_+_8259379_8259460	1.86841	UUGGCAA	ENSMUST00000162034.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039 	ENSMUST00000160705.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039 	ENSMUST00000159433.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039
mm10_v2_chr12_-_44210061_44210077	1.85391	UUGGCAA	ENSMUST00000015049.3|Dnajb9|ENSMUSG00000014905.3|DnaJ (Hsp40) homolog, subfamily B, member 9
mm10_v2_chr16_+_78301458_78301496	1.83865	UUGGCAA	ENSMUST00000023572.7|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr6_+_90462562_90462587	1.80392	UUGGCAA	ENSMUST00000032174.5|Klf15|ENSMUSG00000030087.5|Kruppel-like factor 15
mm10_v2_chrX_+_77511002_77511100	1.79065	UUGGCAA	ENSMUST00000088217.5|Tbl1x|ENSMUSG00000025246.7|transducin (beta)-like 1 X-linked
mm10_v2_chr9_+_100643448_100643542	1.76479	UUGGCAA	ENSMUST00000146312.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1 	ENSMUST00000129269.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr3_-_146812951_146812983	1.75786	UUGGCAA	ENSMUST00000102515.3|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr6_+_114643094_114643105	1.74205	UUGGCAA	ENSMUST00000032457.10|Atg7|ENSMUSG00000030314.10|autophagy related 7
mm10_v2_chrX_-_164980310_164980375	1.73079	UUGGCAA	ENSMUST00000004715.1|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2 	ENSMUST00000112248.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chr5_-_76304474_76304548	1.73025	UUGGCAA	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chr4_-_14826582_14826589	1.72818	UUGGCAA	ENSMUST00000117268.1|Otud6b|ENSMUSG00000040550.10|OTU domain containing 6B
mm10_v2_chr4_+_9844349_9844372	1.71618	UUGGCAA	ENSMUST00000057613.2|Gdf6|ENSMUSG00000051279.2|growth differentiation factor 6
mm10_v2_chr6_+_108213086_108213123	1.71156	UUGGCAA	ENSMUST00000032192.6|Itpr1|ENSMUSG00000030102.8|inositol 1,4,5-trisphosphate receptor 1
mm10_v2_chr18_+_36281069_36281151	1.69084	UUGGCAA	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr11_-_53891638_53891660	1.67579	UUGGCAA	ENSMUST00000019044.7|Slc22a5|ENSMUSG00000018900.7|solute carrier family 22 (organic cation transporter), member 5
mm10_v2_chr5_-_107875035_107875107	1.67484	UUGGCAA	ENSMUST00000138111.1|Evi5|ENSMUSG00000011831.10|ecotropic viral integration site 5 	ENSMUST00000112642.1|Evi5|ENSMUSG00000011831.10|ecotropic viral integration site 5
mm10_v2_chr7_-_119895697_119895752	1.67097	UUGGCAA	ENSMUST00000059851.6|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr4_+_106561027_106561038	1.66883	UUGGCAA	ENSMUST00000047973.3|Dhcr24|ENSMUSG00000034926.3|24-dehydrocholesterol reductase
mm10_v2_chr5_-_63968867_63968905	1.66606	UUGGCAA	ENSMUST00000154169.1|Rell1|ENSMUSG00000047881.8|RELT-like 1
mm10_v2_chr9_-_43239816_43239842	1.65582	UUGGCAA	ENSMUST00000034512.5|Oaf|ENSMUSG00000032014.5|OAF homolog (Drosophila)
mm10_v2_chr3_-_131344892_131344940	1.61684	UUGGCAA	ENSMUST00000090246.4|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2 	ENSMUST00000126569.1|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2
mm10_v2_chr9_-_81633828_81633828	1.61223	UUGGCAA	ENSMUST00000183482.1|Htr1b|ENSMUSG00000049511.5|5-hydroxytryptamine (serotonin) receptor 1B
mm10_v2_chr2_+_55437100_55437182	1.60465	UUGGCAA	ENSMUST00000112633.2|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3 	ENSMUST00000112632.1|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3
mm10_v2_chr11_-_20112876_20112925	1.6033	UUGGCAA	ENSMUST00000000137.7|Actr2|ENSMUSG00000020152.7|ARP2 actin-related protein 2
mm10_v2_chr12_-_98901478_98901492	1.59306	UUGGCAA	ENSMUST00000065716.6|Eml5|ENSMUSG00000051166.9|echinoderm microtubule associated protein like 5
mm10_v2_chr9_+_103112072_103112093	1.59179	UUGGCAA	ENSMUST00000035155.6|Rab6b|ENSMUSG00000032549.6|RAB6B, member RAS oncogene family
mm10_v2_chr4_+_8535604_8535717	1.59122	UUGGCAA	ENSMUST00000060232.7|Rab2a|ENSMUSG00000047187.9|RAB2A, member RAS oncogene family
mm10_v2_chrX_+_151344171_151344197	1.58704	UUGGCAA	ENSMUST00000073364.5|Fam120c|ENSMUSG00000025262.8|family with sequence similarity 120, member C
mm10_v2_chrX_-_143933204_143933311	1.57625	UUGGCAA	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr14_+_11553523_11553542	1.57019	UUGGCAA	ENSMUST00000022264.6|Ptprg|ENSMUSG00000021745.7|protein tyrosine phosphatase, receptor type, G
mm10_v2_chr4_-_34687382_34687452	1.56738	UUGGCAA	ENSMUST00000029970.7|Slc35a1|ENSMUSG00000028293.8|solute carrier family 35 (CMP-sialic acid transporter), member 1
mm10_v2_chr11_-_106612928_106612973	1.56652	UUGGCAA	ENSMUST00000042780.7|Tex2|ENSMUSG00000040548.9|testis expressed gene 2
mm10_v2_chr10_-_62486772_62486805	1.55435	UUGGCAA	ENSMUST00000105447.3|Vps26a|ENSMUSG00000020078.9|vacuolar protein sorting 26 homolog A (yeast)
mm10_v2_chr2_+_90847149_90847160	1.54169	UUGGCAA	ENSMUST00000136872.1|Mtch2|ENSMUSG00000027282.11|mitochondrial carrier homolog 2 (C. elegans)
mm10_v2_chr8_-_121652895_121652913	1.53691	UUGGCAA	ENSMUST00000046386.4|Zcchc14|ENSMUSG00000061410.6|zinc finger, CCHC domain containing 14
mm10_v2_chr16_-_17928136_17928219	1.53086	UUGGCAA	ENSMUST00000003622.8|Slc25a1|ENSMUSG00000003528.8|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
mm10_v2_chr7_-_74554474_74554681	1.52523	UUGGCAA	ENSMUST00000134539.1|Slco3a1|ENSMUSG00000025790.8|solute carrier organic anion transporter family, member 3a1 	ENSMUST00000026897.7|Slco3a1|ENSMUSG00000025790.8|solute carrier organic anion transporter family, member 3a1 	ENSMUST00000098371.2|Slco3a1|ENSMUSG00000025790.8|solute carrier organic anion transporter family, member 3a1
mm10_v2_chr1_-_155417283_155417323	1.50977	UUGGCAA	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr16_+_13358375_13358439	1.50337	UUGGCAA	ENSMUST00000149359.1|Mkl2|ENSMUSG00000009569.8|MKL/myocardin-like 2
mm10_v2_chr7_-_137314394_137314445	1.49551	UUGGCAA	ENSMUST00000168203.1|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000106118.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000169486.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000033378.5|Ebf3|ENSMUSG00000010476.7|early B cell factor 3
mm10_v2_chr5_-_151190154_151190269	1.49526	UUGGCAA	ENSMUST00000062015.8|Stard13|ENSMUSG00000016128.8|StAR-related lipid transfer (START) domain containing 13 	ENSMUST00000110483.2|Stard13|ENSMUSG00000016128.8|StAR-related lipid transfer (START) domain containing 13
mm10_v2_chr13_+_119428888_119428960	1.48008	UUGGCAA	ENSMUST00000026520.7|Paip1|ENSMUSG00000025451.9|polyadenylate binding protein-interacting protein 1
mm10_v2_chr5_+_28071356_28071372	1.47728	UUGGCAA	ENSMUST00000059155.10|Insig1|ENSMUSG00000045294.10|insulin induced gene 1
mm10_v2_chr10_-_20725023_20725078	1.47668	UUGGCAA	ENSMUST00000020165.7|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr2_-_65238625_65238643	1.43949	UUGGCAA	ENSMUST00000112429.2|Cobll1|ENSMUSG00000034903.12|Cobl-like 1 	ENSMUST00000102726.1|Cobll1|ENSMUSG00000034903.12|Cobl-like 1 	ENSMUST00000112430.1|Cobll1|ENSMUSG00000034903.12|Cobl-like 1
mm10_v2_chr4_+_9269285_9269335	1.43739	UUGGCAA	ENSMUST00000038841.7|Clvs1|ENSMUSG00000041216.9|clavesin 1
mm10_v2_chr8_+_60506109_60506125	1.42548	UUGGCAA	ENSMUST00000079472.2|Aadat|ENSMUSG00000057228.5|aminoadipate aminotransferase
mm10_v2_chr11_+_79339792_79339913	1.42167	UUGGCAA	ENSMUST00000108251.2|Nf1|ENSMUSG00000020716.9|neurofibromatosis 1 	ENSMUST00000071325.2|Nf1|ENSMUSG00000020716.9|neurofibromatosis 1
mm10_v2_chr14_+_26579535_26579612	1.41171	UUGGCAA	ENSMUST00000037585.7|Dennd6a|ENSMUSG00000040818.7|DENN/MADD domain containing 6A
mm10_v2_chr9_+_120303896_120303960	1.39157	UUGGCAA	ENSMUST00000048121.6|Myrip|ENSMUSG00000041794.6|myosin VIIA and Rab interacting protein
mm10_v2_chr11_-_105944128_105944223	1.3909	UUGGCAA	ENSMUST00000184086.1|Cyb561|ENSMUSG00000019590.10|cytochrome b-561
mm10_v2_chr12_+_81859964_81860036	1.38004	UUGGCAA	ENSMUST00000021567.5|Pcnx|ENSMUSG00000021140.8|pecanex homolog (Drosophila)
mm10_v2_chr14_-_61439831_61439947	1.37974	UUGGCAA	ENSMUST00000022496.7|Kpna3|ENSMUSG00000021929.8|karyopherin (importin) alpha 3
mm10_v2_chr7_-_49636847_49636851	1.3788	UUGGCAA	ENSMUST00000032717.6|Dbx1|ENSMUSG00000030507.6|developing brain homeobox 1
mm10_v2_chr6_-_18030435_18030585	1.37669	UUGGCAA	ENSMUST00000010941.2|Wnt2|ENSMUSG00000010797.2|wingless-related MMTV integration site 2
mm10_v2_chr10_+_115384951_115385021	1.35359	UUGGCAA	ENSMUST00000036044.8|Zfc3h1|ENSMUSG00000034163.10|zinc finger, C3H1-type containing
mm10_v2_chr1_+_191906743_191906767	1.34159	UUGGCAA	ENSMUST00000044954.6|Slc30a1|ENSMUSG00000037434.7|solute carrier family 30 (zinc transporter), member 1
mm10_v2_chr10_+_93641041_93641056	1.32498	UUGGCAA	ENSMUST00000020204.4|Ntn4|ENSMUSG00000020019.4|netrin 4
mm10_v2_chr10_+_52417532_52417580	1.31839	UUGGCAA	ENSMUST00000023830.8|Nus1|ENSMUSG00000023068.8|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
mm10_v2_chr18_-_46525940_46525999	1.31039	UUGGCAA	ENSMUST00000036226.5|Fem1c|ENSMUSG00000033319.5|fem-1 homolog c (C.elegans)
mm10_v2_chr9_-_90114812_90114821	1.30883	UUGGCAA	ENSMUST00000085248.5|Morf4l1|ENSMUSG00000062270.7|mortality factor 4 like 1 	ENSMUST00000169860.1|Morf4l1|ENSMUSG00000062270.7|mortality factor 4 like 1
mm10_v2_chr5_-_98030727_98030765	1.30684	UUGGCAA	ENSMUST00000031281.9|Antxr2|ENSMUSG00000029338.9|anthrax toxin receptor 2
mm10_v2_chr13_+_41249841_41249863	1.29694	UUGGCAA	ENSMUST00000165561.2|Smim13|ENSMUSG00000091264.2|small integral membrane protein 13
mm10_v2_chr3_+_52268337_52268388	1.28881	UUGGCAA	ENSMUST00000053764.5|Foxo1|ENSMUSG00000044167.5|forkhead box O1
mm10_v2_chr11_+_119022962_119023104	1.28515	UUGGCAA	ENSMUST00000026662.7|Cbx2|ENSMUSG00000025577.7|chromobox 2
mm10_v2_chr8_-_25785154_25785215	1.2717	UUGGCAA	ENSMUST00000038498.8|Bag4|ENSMUSG00000037316.8|BCL2-associated athanogene 4
mm10_v2_chr16_-_75766758_75766821	1.27034	UUGGCAA	ENSMUST00000114244.1|Hspa13|ENSMUSG00000032932.8|heat shock protein 70 family, member 13 	ENSMUST00000046283.8|Hspa13|ENSMUSG00000032932.8|heat shock protein 70 family, member 13
mm10_v2_chr12_+_32953874_32953891	1.26794	UUGGCAA	ENSMUST00000076698.5|Sypl|ENSMUSG00000020570.8|synaptophysin-like protein
mm10_v2_chr7_+_44310213_44310253	1.26618	UUGGCAA	ENSMUST00000107938.1|Shank1|ENSMUSG00000038738.9|SH3/ankyrin domain gene 1
mm10_v2_chr5_-_8622855_8622952	1.22412	UUGGCAA	ENSMUST00000047485.8|Rundc3b|ENSMUSG00000040570.8|RUN domain containing 3B 	ENSMUST00000115378.1|Rundc3b|ENSMUSG00000040570.8|RUN domain containing 3B
mm10_v2_chr12_-_83921899_83921934	1.21675	UUGGCAA	ENSMUST00000117217.1|Numb|ENSMUSG00000021224.8|numb gene homolog (Drosophila)
mm10_v2_chr12_+_32820304_32820362	1.20789	UUGGCAA	ENSMUST00000020886.7|Nampt|ENSMUSG00000020572.7|nicotinamide phosphoribosyltransferase
mm10_v2_chr18_-_34931993_34932007	1.20672	UUGGCAA	ENSMUST00000025218.7|Etf1|ENSMUSG00000024360.7|eukaryotic translation termination factor 1
mm10_v2_chr14_+_34819811_34819834	1.20379	UUGGCAA	ENSMUST00000043349.5|Grid1|ENSMUSG00000041078.6|glutamate receptor, ionotropic, delta 1
mm10_v2_chr6_-_143947092_143947111	1.20228	UUGGCAA	ENSMUST00000144289.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000111748.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr9_+_59578192_59578337	1.20023	UUGGCAA	ENSMUST00000118549.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000034840.3|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr17_+_88440711_88440741	1.19197	UUGGCAA	ENSMUST00000112238.2|Foxn2|ENSMUSG00000034998.12|forkhead box N2 	ENSMUST00000155640.1|Foxn2|ENSMUSG00000034998.12|forkhead box N2
mm10_v2_chrX_-_64276937_64277002	1.18602	UUGGCAA	ENSMUST00000114679.1|Slitrk4|ENSMUSG00000046699.8|SLIT and NTRK-like family, member 4 	ENSMUST00000069926.7|Slitrk4|ENSMUSG00000046699.8|SLIT and NTRK-like family, member 4
mm10_v2_chr15_-_93336800_93336852	1.18426	UUGGCAA	ENSMUST00000080299.6|Yaf2|ENSMUSG00000022634.9|YY1 associated factor 2
mm10_v2_chr12_+_111039334_111039400	1.17556	UUGGCAA	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr12_+_69184158_69184170	1.17372	UUGGCAA	ENSMUST00000060579.8|Mgat2|ENSMUSG00000043998.9|mannoside acetylglucosaminyltransferase 2
mm10_v2_chr3_-_107696462_107696574	1.17346	UUGGCAA	ENSMUST00000029490.8|Ahcyl1|ENSMUSG00000027893.8|S-adenosylhomocysteine hydrolase-like 1
mm10_v2_chr9_-_64253617_64253635	1.16253	UUGGCAA	ENSMUST00000005066.8|Map2k1|ENSMUSG00000004936.8|mitogen-activated protein kinase kinase 1
mm10_v2_chr13_-_110280103_110280213	1.16011	UUGGCAA	ENSMUST00000167824.1|Rab3c|ENSMUSG00000021700.9|RAB3C, member RAS oncogene family
mm10_v2_chr9_+_47530173_47530373	1.15817	UUGGCAA	ENSMUST00000114548.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000152459.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000143026.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000085909.2|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000114547.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000034581.3|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1
mm10_v2_chr2_-_33371400_33371484	1.156	UUGGCAA	ENSMUST00000113164.1|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1 	ENSMUST00000091039.2|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1 	ENSMUST00000042615.6|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1
mm10_v2_chr11_+_60417238_60417301	1.15114	UUGGCAA	ENSMUST00000070681.6|Gid4|ENSMUSG00000018415.8|GID complex subunit 4, VID24 homolog (S. cerevisiae)
mm10_v2_chr13_+_47122719_47122761	1.14659	UUGGCAA	ENSMUST00000068891.4|Rnf144b|ENSMUSG00000038068.8|ring finger protein 144B
mm10_v2_chr3_-_108146080_108146150	1.14364	UUGGCAA	ENSMUST00000000001.4|Gnai3|ENSMUSG00000000001.4|guanine nucleotide binding protein (G protein), alpha inhibiting 3
mm10_v2_chr17_+_44188564_44188594	1.13657	UUGGCAA	ENSMUST00000024755.5|Clic5|ENSMUSG00000023959.8|chloride intracellular channel 5
mm10_v2_chr9_-_103364970_103364996	1.13651	UUGGCAA	ENSMUST00000116517.2|Cdv3|ENSMUSG00000032803.8|carnitine deficiency-associated gene expressed in ventricle 3
mm10_v2_chr11_+_5520652_5520659	1.1342	UUGGCAA	ENSMUST00000063084.9|Xbp1|ENSMUSG00000020484.12|X-box binding protein 1
mm10_v2_chr10_-_118868903_118868903	1.13218	UUGGCAA	ENSMUST00000004281.8|Dyrk2|ENSMUSG00000028630.8|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm10_v2_chr12_-_86884808_86884842	1.12635	UUGGCAA	ENSMUST00000038422.6|Irf2bpl|ENSMUSG00000034168.6|interferon regulatory factor 2 binding protein-like
mm10_v2_chr11_-_97187872_97187926	1.12505	UUGGCAA	ENSMUST00000001479.4|Kpnb1|ENSMUSG00000001440.5|karyopherin (importin) beta 1
mm10_v2_chr14_+_120275669_120275714	1.12399	UUGGCAA	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chr4_-_121098190_121098250	1.11295	UUGGCAA	ENSMUST00000058754.2|Zmpste24|ENSMUSG00000043207.4|zinc metallopeptidase, STE24
mm10_v2_chr11_-_5542177_5542219	1.10876	UUGGCAA	ENSMUST00000020776.4|Ccdc117|ENSMUSG00000020482.4|coiled-coil domain containing 117
mm10_v2_chr17_-_80480435_80480462	1.10485	UUGGCAA	ENSMUST00000068714.5|Sos1|ENSMUSG00000024241.6|son of sevenless homolog 1 (Drosophila)
mm10_v2_chr2_-_66634952_66634952	1.10035	UUGGCAA	ENSMUST00000100064.2|Scn9a|ENSMUSG00000075316.5|sodium channel, voltage-gated, type IX, alpha 	ENSMUST00000100063.2|Scn9a|ENSMUSG00000075316.5|sodium channel, voltage-gated, type IX, alpha
mm10_v2_chr5_+_67306941_67306977	1.09922	UUGGCAA	ENSMUST00000162372.1|Slc30a9|ENSMUSG00000029221.9|solute carrier family 30 (zinc transporter), member 9 	ENSMUST00000113676.2|Slc30a9|ENSMUSG00000029221.9|solute carrier family 30 (zinc transporter), member 9
mm10_v2_chr14_+_122475397_122475435	1.09581	UUGGCAA	ENSMUST00000075888.5|Zic2|ENSMUSG00000061524.8|zinc finger protein of the cerebellum 2
mm10_v2_chr7_+_141475240_141475256	1.07658	UUGGCAA	ENSMUST00000026585.7|Tspan4|ENSMUSG00000025511.8|tetraspanin 4
mm10_v2_chr9_-_123851855_123851912	1.07645	UUGGCAA	ENSMUST00000184082.1|Fyco1|ENSMUSG00000025241.9|FYVE and coiled-coil domain containing 1 	ENSMUST00000167595.2|Fyco1|ENSMUSG00000025241.9|FYVE and coiled-coil domain containing 1
mm10_v2_chr4_-_141723401_141723436	1.07132	UUGGCAA	ENSMUST00000102484.4|Ddi2|ENSMUSG00000078515.3|DNA-damage inducible protein 2 	ENSMUST00000177592.1|Rsc1a1|ENSMUSG00000040715.11|regulatory solute carrier protein, family 1, member 1
mm10_v2_chr14_-_31830402_31830440	1.06701	UUGGCAA	ENSMUST00000014640.7|Ankrd28|ENSMUSG00000014496.7|ankyrin repeat domain 28
mm10_v2_chr14_+_20348159_20348244	1.06476	UUGGCAA	ENSMUST00000090503.4|Fam149b|ENSMUSG00000039599.9|family with sequence similarity 149, member B 	ENSMUST00000090499.5|Fam149b|ENSMUSG00000039599.9|family with sequence similarity 149, member B 	ENSMUST00000037698.5|Fam149b|ENSMUSG00000039599.9|family with sequence similarity 149, member B 	ENSMUST00000051915.6|Fam149b|ENSMUSG00000039599.9|family with sequence similarity 149, member B
mm10_v2_chrX_-_36645359_36645414	1.06164	UUGGCAA	ENSMUST00000051906.6|Akap17b|ENSMUSG00000059708.6|A kinase (PRKA) anchor protein 17B
mm10_v2_chr12_-_75177325_75177359	1.05907	UUGGCAA	ENSMUST00000042299.2|Kcnh5|ENSMUSG00000034402.2|potassium voltage-gated channel, subfamily H (eag-related), member 5
mm10_v2_chr8_+_105225145_105225193	1.05823	UUGGCAA	ENSMUST00000034361.3|D230025D16Rik|ENSMUSG00000031889.3|RIKEN cDNA D230025D16 gene
mm10_v2_chr10_+_86779000_86779009	1.05604	UUGGCAA	ENSMUST00000099396.2|Nt5dc3|ENSMUSG00000054027.7|5'-nucleotidase domain containing 3
mm10_v2_chr16_-_96082389_96082481	1.03142	UUGGCAA	ENSMUST00000099502.2|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000023631.8|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000113829.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000153398.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1
mm10_v2_chr4_+_55350043_55350078	1.02613	UUGGCAA	ENSMUST00000030134.8|Rad23b|ENSMUSG00000028426.10|RAD23b homolog (S. cerevisiae)
mm10_v2_chr17_-_36951636_36951741	1.02414	UUGGCAA	ENSMUST00000040402.7|Ppp1r11|ENSMUSG00000036398.7|protein phosphatase 1, regulatory (inhibitor) subunit 11 	ENSMUST00000174711.1|Ppp1r11|ENSMUSG00000036398.7|protein phosphatase 1, regulatory (inhibitor) subunit 11
mm10_v2_chr9_-_16378231_16378231	1.01771	UUGGCAA	ENSMUST00000082170.5|Fat3|ENSMUSG00000074505.4|FAT tumor suppressor homolog 3 (Drosophila)
mm10_v2_chr5_-_122779278_122779434	1.01706	UUGGCAA	ENSMUST00000111668.3|Camkk2|ENSMUSG00000029471.9|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm10_v2_chr13_+_80883403_80883422	1.01144	UUGGCAA	ENSMUST00000099356.2|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr2_-_84715160_84715218	1.00762	UUGGCAA	ENSMUST00000035840.5|Zdhhc5|ENSMUSG00000034075.10|zinc finger, DHHC domain containing 5
mm10_v2_chr11_+_75732869_75732975	1.00568	UUGGCAA	ENSMUST00000067664.3|Ywhae|ENSMUSG00000020849.7|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm10_v2_chr14_+_25842146_25842170	1.0051	UUGGCAA	ENSMUST00000022416.8|Anxa11|ENSMUSG00000021866.9|annexin A11
mm10_v2_chr13_+_96924674_96924694	1.00464	UUGGCAA	ENSMUST00000171324.1|Gcnt4|ENSMUSG00000091387.1|glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase)
mm10_v2_chr6_+_149408973_149409038	0.994352	UUGGCAA	ENSMUST00000086829.4|Bicd1|ENSMUSG00000003452.9|bicaudal D homolog 1 (Drosophila) 	ENSMUST00000111513.2|Bicd1|ENSMUSG00000003452.9|bicaudal D homolog 1 (Drosophila)
mm10_v2_chr10_+_70245083_70245140	0.994322	UUGGCAA	ENSMUST00000046807.6|Slc16a9|ENSMUSG00000037762.6|solute carrier family 16 (monocarboxylic acid transporters), member 9
mm10_v2_chr12_-_35534973_35535058	0.992643	UUGGCAA	ENSMUST00000116436.2|Ahr|ENSMUSG00000019256.11|aryl-hydrocarbon receptor
mm10_v2_chr1_+_16105774_16105870	0.992615	UUGGCAA	ENSMUST00000027053.7|Rdh10|ENSMUSG00000025921.7|retinol dehydrogenase 10 (all-trans)
mm10_v2_chr13_-_45964964_45965001	0.992301	UUGGCAA	ENSMUST00000180110.1|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000091628.3|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000167708.2|Atxn1|ENSMUSG00000046876.9|ataxin 1
mm10_v2_chr12_+_111538101_111538243	0.988916	UUGGCAA	ENSMUST00000166123.1|Eif5|ENSMUSG00000021282.10|eukaryotic translation initiation factor 5
mm10_v2_chr2_+_22622183_22622205	0.984923	UUGGCAA	ENSMUST00000028123.3|Gad2|ENSMUSG00000026787.3|glutamic acid decarboxylase 2
mm10_v2_chr10_-_61452658_61452813	0.979757	UUGGCAA	ENSMUST00000167087.1|Eif4ebp2|ENSMUSG00000020091.8|eukaryotic translation initiation factor 4E binding protein 2 	ENSMUST00000020288.7|Eif4ebp2|ENSMUSG00000020091.8|eukaryotic translation initiation factor 4E binding protein 2
mm10_v2_chr15_+_58415456_58415512	0.977799	UUGGCAA	ENSMUST00000037270.3|D15Ertd621e|ENSMUSG00000037119.3|DNA segment, Chr 15, ERATO Doi 621, expressed
mm10_v2_chr2_+_120567652_120567678	0.966987	UUGGCAA	ENSMUST00000110711.2|Snap23|ENSMUSG00000027287.8|synaptosomal-associated protein 23
mm10_v2_chr16_-_17891593_17891700	0.958857	UUGGCAA	ENSMUST00000117082.1|Dgcr2|ENSMUSG00000003166.13|DiGeorge syndrome critical region gene 2 	ENSMUST00000066127.6|Dgcr2|ENSMUSG00000003166.13|DiGeorge syndrome critical region gene 2 	ENSMUST00000117945.1|Dgcr2|ENSMUSG00000003166.13|DiGeorge syndrome critical region gene 2 	ENSMUST00000012152.6|Dgcr2|ENSMUSG00000003166.13|DiGeorge syndrome critical region gene 2
mm10_v2_chr13_-_85288999_85289058	0.955708	UUGGCAA	ENSMUST00000109552.2|Rasa1|ENSMUSG00000021549.7|RAS p21 protein activator 1
mm10_v2_chr9_-_99436687_99436733	0.952295	UUGGCAA	ENSMUST00000035045.8|Mras|ENSMUSG00000032470.10|muscle and microspikes RAS
mm10_v2_chr6_-_88045190_88045270	0.948921	UUGGCAA	ENSMUST00000113596.1|Rab7|ENSMUSG00000079477.3|RAB7, member RAS oncogene family 	ENSMUST00000113600.3|Rab7|ENSMUSG00000079477.3|RAB7, member RAS oncogene family
mm10_v2_chrX_+_58030622_58030643	0.94282	UUGGCAA	ENSMUST00000088627.4|Zic3|ENSMUSG00000067860.5|zinc finger protein of the cerebellum 3
mm10_v2_chr11_-_78165521_78165589	0.941259	UUGGCAA	ENSMUST00000017530.3|Traf4|ENSMUSG00000017386.4|TNF receptor associated factor 4
mm10_v2_chr12_+_118846329_118846329	0.934969	UUGGCAA	ENSMUST00000063918.2|Sp8|ENSMUSG00000048562.6|trans-acting transcription factor 8
mm10_v2_chr19_+_6306456_6306553	0.927869	UUGGCAA	ENSMUST00000025681.7|Cdc42bpg|ENSMUSG00000024769.7|CDC42 binding protein kinase gamma (DMPK-like)
mm10_v2_chr1_-_58586191_58586323	0.925918	UUGGCAA	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr10_-_53379816_53379858	0.917519	UUGGCAA	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr1_-_30949756_30949770	0.911044	UUGGCAA	ENSMUST00000076587.3|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1 	ENSMUST00000027232.7|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1
mm10_v2_chr1_+_143640664_143640751	0.910815	UUGGCAA	ENSMUST00000038252.2|B3galt2|ENSMUSG00000033849.2|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm10_v2_chr6_+_146888481_146888589	0.901615	UUGGCAA	ENSMUST00000016631.7|Ppfibp1|ENSMUSG00000016487.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENSMUST00000111623.2|Ppfibp1|ENSMUSG00000016487.9|PTPRF interacting protein, binding protein 1 (liprin beta 1)
mm10_v2_chr7_+_134670667_134670715	0.901292	UUGGCAA	ENSMUST00000084488.4|Dock1|ENSMUSG00000058325.5|dedicator of cytokinesis 1
mm10_v2_chr14_-_121797670_121797753	0.89504	UUGGCAA	ENSMUST00000100299.3|Dock9|ENSMUSG00000025558.9|dedicator of cytokinesis 9
mm10_v2_chr4_+_125490688_125490704	0.891122	UUGGCAA	ENSMUST00000030676.7|Grik3|ENSMUSG00000001985.9|glutamate receptor, ionotropic, kainate 3
mm10_v2_chr11_+_83473079_83473123	0.88791	UUGGCAA	ENSMUST00000021018.4|Taf15|ENSMUSG00000020680.9|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr1_+_104768510_104768529	0.881086	UUGGCAA	ENSMUST00000062528.8|Cdh20|ENSMUSG00000050840.8|cadherin 20
mm10_v2_chr11_-_51857624_51857686	0.879854	UUGGCAA	ENSMUST00000020655.7|Phf15|ENSMUSG00000020387.9|PHD finger protein 15 	ENSMUST00000109090.1|Phf15|ENSMUSG00000020387.9|PHD finger protein 15
mm10_v2_chr18_+_75367529_75367561	0.876534	UUGGCAA	ENSMUST00000026999.3|Smad7|ENSMUSG00000025880.5|SMAD family member 7
mm10_v2_chr16_+_32877775_32877831	0.87453	UUGGCAA	ENSMUST00000023489.4|Fyttd1|ENSMUSG00000022800.7|forty-two-three domain containing 1 	ENSMUST00000171325.1|Fyttd1|ENSMUSG00000022800.7|forty-two-three domain containing 1
mm10_v2_chr6_+_14901344_14901364	0.874276	UUGGCAA	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr2_+_20737306_20737321	0.872801	UUGGCAA	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr9_-_51963533_51963563	0.866361	UUGGCAA	ENSMUST00000034552.6|Fdx1|ENSMUSG00000032051.8|ferredoxin 1
mm10_v2_chr19_-_59345746_59345853	0.858569	UUGGCAA	ENSMUST00000099274.2|Pdzd8|ENSMUSG00000074746.2|PDZ domain containing 8
mm10_v2_chr10_-_84440591_84440604	0.856226	UUGGCAA	ENSMUST00000020220.8|Nuak1|ENSMUSG00000020032.8|NUAK family, SNF1-like kinase, 1
mm10_v2_chr8_+_111536492_111536640	0.853736	UUGGCAA	ENSMUST00000168428.1|Znrf1|ENSMUSG00000033545.8|zinc and ring finger 1 	ENSMUST00000171182.1|Znrf1|ENSMUSG00000033545.8|zinc and ring finger 1
mm10_v2_chr5_-_65492984_65493051	0.846055	UUGGCAA	ENSMUST00000139122.1|Smim14|ENSMUSG00000037822.6|small integral membrane protein 14
mm10_v2_chr5_-_96161990_96162097	0.84587	UUGGCAA	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr2_-_91236877_91236921	0.842649	UUGGCAA	ENSMUST00000111352.1|Ddb2|ENSMUSG00000002109.8|damage specific DNA binding protein 2
mm10_v2_chr11_-_53980296_53980350	0.841051	UUGGCAA	ENSMUST00000076493.4|Slc22a21|ENSMUSG00000063652.4|solute carrier family 22 (organic cation transporter), member 21
mm10_v2_chr9_+_50494516_50494533	0.839432	UUGGCAA	ENSMUST00000114474.1|1600029D21Rik|ENSMUSG00000032068.8|RIKEN cDNA 1600029D21 gene
mm10_v2_chr1_+_185454803_185454848	0.831088	UUGGCAA	ENSMUST00000061093.6|Slc30a10|ENSMUSG00000026614.6|solute carrier family 30, member 10
mm10_v2_chr16_+_14705832_14705858	0.824634	UUGGCAA	ENSMUST00000023356.6|Snai2|ENSMUSG00000022676.6|snail homolog 2 (Drosophila)
mm10_v2_chr5_+_72914264_72914304	0.820592	UUGGCAA	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr18_-_9450097_9450161	0.818306	UUGGCAA	ENSMUST00000053917.4|Ccny|ENSMUSG00000024286.7|cyclin Y
mm10_v2_chr19_-_18631754_18631824	0.807822	UUGGCAA	ENSMUST00000025631.6|Ostf1|ENSMUSG00000024725.6|osteoclast stimulating factor 1
mm10_v2_chr8_+_88697022_88697033	0.801836	UUGGCAA	ENSMUST00000043526.8|Cyld|ENSMUSG00000036712.8|cylindromatosis (turban tumor syndrome)
mm10_v2_chr16_+_30065333_30065351	0.800148	UUGGCAA	ENSMUST00000023171.7|Hes1|ENSMUSG00000022528.7|hairy and enhancer of split 1 (Drosophila)
mm10_v2_chr18_+_35598607_35598653	0.793537	UUGGCAA	ENSMUST00000041314.8|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115737.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115736.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115735.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2
mm10_v2_chr4_+_136469755_136469850	0.790597	UUGGCAA	ENSMUST00000170102.1|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1 	ENSMUST00000105849.2|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1 	ENSMUST00000129230.2|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1
mm10_v2_chr17_-_56717681_56717709	0.784418	UUGGCAA	ENSMUST00000164907.1|Vmac|ENSMUSG00000054723.5|vimentin-type intermediate filament associated coiled-coil protein
mm10_v2_chr11_-_88851462_88851522	0.784129	UUGGCAA	ENSMUST00000107903.1|Akap1|ENSMUSG00000018428.9|A kinase (PRKA) anchor protein 1
mm10_v2_chr12_-_85097080_85097091	0.782429	UUGGCAA	ENSMUST00000177289.2|Prox2|ENSMUSG00000042320.10|prospero homeobox 2
mm10_v2_chr12_+_111574491_111574542	0.779818	UUGGCAA	ENSMUST00000084953.5|Mark3|ENSMUSG00000007411.9|MAP/microtubule affinity-regulating kinase 3 	ENSMUST00000075281.6|Mark3|ENSMUSG00000007411.9|MAP/microtubule affinity-regulating kinase 3
mm10_v2_chr11_+_115420138_115420182	0.772137	UUGGCAA	ENSMUST00000106533.1|Kctd2|ENSMUSG00000016940.12|potassium channel tetramerisation domain containing 2 	ENSMUST00000123345.1|Kctd2|ENSMUSG00000016940.12|potassium channel tetramerisation domain containing 2
mm10_v2_chr2_+_30364227_30364260	0.771523	UUGGCAA	ENSMUST00000077977.7|Fam73b|ENSMUSG00000026858.12|family with sequence similarity 73, member B 	ENSMUST00000140075.2|Fam73b|ENSMUSG00000026858.12|family with sequence similarity 73, member B
mm10_v2_chr12_+_75818294_75818356	0.749879	UUGGCAA	ENSMUST00000143031.1|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2 	ENSMUST00000044217.9|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2 	ENSMUST00000150317.1|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2
mm10_v2_chr5_-_3803081_3803119	0.749344	UUGGCAA	ENSMUST00000043551.6|Ankib1|ENSMUSG00000040351.7|ankyrin repeat and IBR domain containing 1
mm10_v2_chr1_-_165934900_165935036	0.749225	UUGGCAA	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr5_+_71699918_71699949	0.748066	UUGGCAA	ENSMUST00000031122.7|Gabrb1|ENSMUSG00000029212.7|gamma-aminobutyric acid (GABA) A receptor, subunit beta 1
mm10_v2_chr9_+_102717668_102717697	0.747097	UUGGCAA	ENSMUST00000035121.7|Amotl2|ENSMUSG00000032531.9|angiomotin-like 2
mm10_v2_chr7_-_138909492_138909513	0.742174	UUGGCAA	ENSMUST00000106112.1|Bnip3|ENSMUSG00000078566.2|BCL2/adenovirus E1B interacting protein 3
mm10_v2_chr14_-_124677089_124677127	0.736891	UUGGCAA	ENSMUST00000095529.3|Fgf14|ENSMUSG00000025551.7|fibroblast growth factor 14
mm10_v2_chr9_-_75611308_75611334	0.736675	UUGGCAA	ENSMUST00000064433.3|Tmod2|ENSMUSG00000032186.8|tropomodulin 2
mm10_v2_chr14_+_27238018_27238046	0.736326	UUGGCAA	ENSMUST00000049206.5|Arhgef3|ENSMUSG00000021895.9|Rho guanine nucleotide exchange factor (GEF) 3
mm10_v2_chr2_-_64097994_64098023	0.735218	UUGGCAA	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr10_-_115315546_115315615	0.73486	UUGGCAA	ENSMUST00000020343.7|Rab21|ENSMUSG00000020132.9|RAB21, member RAS oncogene family
mm10_v2_chr12_-_80112998_80113019	0.73032	UUGGCAA	ENSMUST00000165114.1|Zfp36l1|ENSMUSG00000021127.6|zinc finger protein 36, C3H type-like 1 	ENSMUST00000021552.1|Zfp36l1|ENSMUSG00000021127.6|zinc finger protein 36, C3H type-like 1
mm10_v2_chr12_+_80644212_80644265	0.730103	UUGGCAA	ENSMUST00000085245.5|Slc39a9|ENSMUSG00000048833.8|solute carrier family 39 (zinc transporter), member 9
mm10_v2_chr19_-_17837620_17837642	0.728258	UUGGCAA	ENSMUST00000025618.8|Pcsk5|ENSMUSG00000024713.9|proprotein convertase subtilisin/kexin type 5 	ENSMUST00000050715.8|Pcsk5|ENSMUSG00000024713.9|proprotein convertase subtilisin/kexin type 5
mm10_v2_chr10_-_61979073_61979108	0.726837	UUGGCAA	ENSMUST00000105453.1|Col13a1|ENSMUSG00000058806.8|collagen, type XIII, alpha 1 	ENSMUST00000105452.2|Col13a1|ENSMUSG00000058806.8|collagen, type XIII, alpha 1 	ENSMUST00000105454.2|Col13a1|ENSMUSG00000058806.8|collagen, type XIII, alpha 1
mm10_v2_chr13_-_74317234_74317326	0.714814	UUGGCAA	ENSMUST00000022060.5|Pdcd6|ENSMUSG00000021576.5|programmed cell death 6
mm10_v2_chr5_-_130255525_130255537	0.709811	UUGGCAA	ENSMUST00000026387.4|Sbds|ENSMUSG00000025337.4|Shwachman-Bodian-Diamond syndrome homolog (human)
mm10_v2_chr2_+_105668888_105668914	0.705054	UUGGCAA	ENSMUST00000111086.4|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000111087.3|Pax6|ENSMUSG00000027168.15|paired box gene 6
mm10_v2_chr5_+_142629537_142629593	0.694416	UUGGCAA	ENSMUST00000036872.9|Wipi2|ENSMUSG00000029578.9|WD repeat domain, phosphoinositide interacting 2 	ENSMUST00000110778.1|Wipi2|ENSMUSG00000029578.9|WD repeat domain, phosphoinositide interacting 2
mm10_v2_chrX_-_136868537_136868755	0.690665	UUGGCAA	ENSMUST00000058814.6|Rab9b|ENSMUSG00000043463.6|RAB9B, member RAS oncogene family
mm10_v2_chr11_+_29692937_29692997	0.687174	UUGGCAA	ENSMUST00000102843.3|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000102842.3|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000078830.4|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000170731.1|Rtn4|ENSMUSG00000020458.10|reticulon 4
mm10_v2_chr12_-_3309912_3309975	0.685584	UUGGCAA	ENSMUST00000021001.8|Rab10|ENSMUSG00000020671.8|RAB10, member RAS oncogene family
mm10_v2_chr19_-_41385070_41385086	0.678321	UUGGCAA	ENSMUST00000059672.7|Pik3ap1|ENSMUSG00000025017.9|phosphoinositide-3-kinase adaptor protein 1
mm10_v2_chr9_+_31030621_31030700	0.676695	UUGGCAA	ENSMUST00000115222.2|Zbtb44|ENSMUSG00000047412.9|zinc finger and BTB domain containing 44
mm10_v2_chr1_-_16619437_16619489	0.672819	UUGGCAA	ENSMUST00000117146.1|Ube2w|ENSMUSG00000025939.11|ubiquitin-conjugating enzyme E2W (putative)
mm10_v2_chr3_-_144570136_144570227	0.669671	UUGGCAA	ENSMUST00000043325.7|Hs2st1|ENSMUSG00000040151.8|heparan sulfate 2-O-sulfotransferase 1
mm10_v2_chr8_-_26119125_26119233	0.666873	UUGGCAA	ENSMUST00000037182.7|Hook3|ENSMUSG00000037234.10|hook homolog 3 (Drosophila)
mm10_v2_chr16_+_11322876_11322911	0.665708	UUGGCAA	ENSMUST00000180792.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr7_+_81571246_81571318	0.655662	UUGGCAA	ENSMUST00000165460.1|Whamm|ENSMUSG00000045795.9|WAS protein homolog associated with actin, golgi membranes and microtubules
mm10_v2_chr3_-_9004686_9004750	0.653445	UUGGCAA	ENSMUST00000120143.1|Tpd52|ENSMUSG00000027506.9|tumor protein D52
mm10_v2_chr2_-_91070283_91070417	0.645456	UUGGCAA	ENSMUST00000111436.2|Slc39a13|ENSMUSG00000002105.9|solute carrier family 39 (metal ion transporter), member 13 	ENSMUST00000073575.5|Slc39a13|ENSMUSG00000002105.9|solute carrier family 39 (metal ion transporter), member 13
mm10_v2_chr1_-_56972437_56972502	0.644604	UUGGCAA	ENSMUST00000042857.7|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr18_+_31759817_31759851	0.631656	UUGGCAA	ENSMUST00000115808.2|Ammecr1l|ENSMUSG00000041915.8|AMME chromosomal region gene 1-like
mm10_v2_chr15_-_84855093_84855127	0.631123	UUGGCAA	ENSMUST00000016768.5|Phf21b|ENSMUSG00000016624.9|PHD finger protein 21B
mm10_v2_chr13_+_41606216_41606216	0.629113	UUGGCAA	ENSMUST00000129449.1|Tmem170b|ENSMUSG00000087370.2|transmembrane protein 170B
mm10_v2_chr5_+_143403819_143403882	0.626876	UUGGCAA	ENSMUST00000110731.2|Kdelr2|ENSMUSG00000079111.2|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
mm10_v2_chr4_+_41135743_41135898	0.618715	UUGGCAA	ENSMUST00000040008.3|Ube2r2|ENSMUSG00000036241.3|ubiquitin-conjugating enzyme E2R 2
mm10_v2_chr8_-_26015577_26015626	0.603449	UUGGCAA	ENSMUST00000016138.9|Fnta|ENSMUSG00000015994.9|farnesyltransferase, CAAX box, alpha
mm10_v2_chr16_-_31275277_31275290	0.602814	UUGGCAA	ENSMUST00000060188.7|Ppp1r2|ENSMUSG00000047714.8|protein phosphatase 1, regulatory (inhibitor) subunit 2
mm10_v2_chr2_-_27426992_27427061	0.60227	UUGGCAA	ENSMUST00000056176.7|Vav2|ENSMUSG00000009621.12|vav 2 oncogene
mm10_v2_chr11_+_50025309_50025374	0.598223	UUGGCAA	ENSMUST00000054684.7|Rnf130|ENSMUSG00000020376.10|ring finger protein 130 	ENSMUST00000102776.4|Rnf130|ENSMUSG00000020376.10|ring finger protein 130
mm10_v2_chr6_-_13677930_13677974	0.592901	UUGGCAA	ENSMUST00000045235.5|B630005N14Rik|ENSMUSG00000042742.5|RIKEN cDNA B630005N14 gene
mm10_v2_chr10_+_95940663_95940703	0.592117	UUGGCAA	ENSMUST00000053484.6|Eea1|ENSMUSG00000036499.8|early endosome antigen 1
mm10_v2_chr15_+_81586206_81586250	0.590195	UUGGCAA	ENSMUST00000068387.4|Ep300|ENSMUSG00000055024.6|E1A binding protein p300
mm10_v2_chr6_+_100833606_100833663	0.586493	UUGGCAA	ENSMUST00000063854.4|Ppp4r2|ENSMUSG00000052144.6|protein phosphatase 4, regulatory subunit 2
mm10_v2_chr11_+_49846732_49846758	0.586389	UUGGCAA	ENSMUST00000178543.1|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000164643.1|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000109179.2|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000020634.7|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9
mm10_v2_chr5_-_128953303_128953362	0.585218	UUGGCAA	ENSMUST00000111346.1|Rimbp2|ENSMUSG00000029420.8|RIMS binding protein 2
mm10_v2_chr2_-_26208281_26208293	0.582904	UUGGCAA	ENSMUST00000054099.9|Lhx3|ENSMUSG00000026934.9|LIM homeobox protein 3
mm10_v2_chr6_-_124829398_124829484	0.580838	UUGGCAA	ENSMUST00000142058.1|Usp5|ENSMUSG00000038429.4|ubiquitin specific peptidase 5 (isopeptidase T) 	ENSMUST00000122110.1|Usp5|ENSMUSG00000038429.4|ubiquitin specific peptidase 5 (isopeptidase T) 	ENSMUST00000047510.3|Usp5|ENSMUSG00000038429.4|ubiquitin specific peptidase 5 (isopeptidase T)
mm10_v2_chr17_+_25188380_25188418	0.579605	UUGGCAA	ENSMUST00000039734.5|Unkl|ENSMUSG00000015127.8|unkempt-like (Drosophila)
mm10_v2_chr14_-_57058030_57058030	0.577275	UUGGCAA	ENSMUST00000061614.6|Gja3|ENSMUSG00000048582.6|gap junction protein, alpha 3
mm10_v2_chr2_+_37452231_37452286	0.565734	UUGGCAA	ENSMUST00000148470.1|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1 	ENSMUST00000066055.3|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1 	ENSMUST00000112920.1|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1
mm10_v2_chr8_-_61902669_61902713	0.561814	UUGGCAA	ENSMUST00000121785.1|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein 	ENSMUST00000034057.7|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein
mm10_v2_chr4_-_25800083_25800146	0.561015	UUGGCAA	ENSMUST00000084770.4|Fut9|ENSMUSG00000055373.8|fucosyltransferase 9
mm10_v2_chr6_-_149101674_149101686	0.558733	UUGGCAA	ENSMUST00000111557.1|Dennd5b|ENSMUSG00000030313.9|DENN/MADD domain containing 5B
mm10_v2_chr12_+_112722163_112722239	0.551989	UUGGCAA	ENSMUST00000101018.3|Cep170b|ENSMUSG00000072825.4|centrosomal protein 170B 	ENSMUST00000179041.1|Cep170b|ENSMUSG00000072825.4|centrosomal protein 170B 	ENSMUST00000092279.6|Cep170b|ENSMUSG00000072825.4|centrosomal protein 170B
mm10_v2_chr4_-_151996113_151996258	0.543827	UUGGCAA	ENSMUST00000055688.9|Phf13|ENSMUSG00000047777.9|PHD finger protein 13
mm10_v2_chr9_-_50659780_50659801	0.543575	UUGGCAA	ENSMUST00000034567.3|Dlat|ENSMUSG00000000168.3|dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
mm10_v2_chr11_+_66911981_66912003	0.537491	UUGGCAA	ENSMUST00000123434.2|Pirt|ENSMUSG00000048070.4|phosphoinositide-interacting regulator of transient receptor potential channels
mm10_v2_chr1_+_36511867_36511903	0.525969	UUGGCAA	ENSMUST00000001166.7|Cnnm3|ENSMUSG00000001138.7|cyclin M3 	ENSMUST00000097776.3|Cnnm3|ENSMUSG00000001138.7|cyclin M3
mm10_v2_chr1_+_135324770_135324820	0.516316	UUGGCAA	ENSMUST00000059352.2|Lmod1|ENSMUSG00000048096.7|leiomodin 1 (smooth muscle)
mm10_v2_chr9_-_43105718_43105793	0.505422	UUGGCAA	ENSMUST00000165665.1|Arhgef12|ENSMUSG00000059495.7|Rho guanine nucleotide exchange factor (GEF) 12
mm10_v2_chr19_+_8741413_8741461	0.504367	UUGGCAA	ENSMUST00000176381.1|Stx5a|ENSMUSG00000010110.11|syntaxin 5A
mm10_v2_chr2_+_90940397_90940543	0.50361	UUGGCAA	ENSMUST00000068726.6|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000005643.7|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000177642.1|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000111451.3|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000068747.7|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1
mm10_v2_chr9_-_119937514_119937558	0.501183	UUGGCAA	ENSMUST00000035099.7|Gorasp1|ENSMUSG00000032513.7|golgi reassembly stacking protein 1
mm10_v2_chrX_-_167382747_167382760	0.50104	UUGGCAA	ENSMUST00000026839.4|Prps2|ENSMUSG00000025742.5|phosphoribosyl pyrophosphate synthetase 2
mm10_v2_chr18_-_38601268_38601355	0.500067	UUGGCAA	ENSMUST00000025295.6|Spry4|ENSMUSG00000024427.6|sprouty homolog 4 (Drosophila)
mm10_v2_chr12_+_76370266_76370266	0.498179	UUGGCAA	ENSMUST00000042779.3|Zbtb1|ENSMUSG00000033454.6|zinc finger and BTB domain containing 1
mm10_v2_chr3_-_117360876_117360876	0.497751	UUGGCAA	ENSMUST00000061071.8|D3Bwg0562e|ENSMUSG00000044667.8|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm10_v2_chr19_+_25610533_25610553	0.497057	UUGGCAA	ENSMUST00000048935.4|Dmrt3|ENSMUSG00000042372.4|doublesex and mab-3 related transcription factor 3
mm10_v2_chr10_-_5922385_5922407	0.496138	UUGGCAA	ENSMUST00000131996.1|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17 	ENSMUST00000064225.7|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17
mm10_v2_chr14_+_121035538_121035575	0.49315	UUGGCAA	ENSMUST00000026635.7|Farp1|ENSMUSG00000025555.8|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm10_v2_chr11_+_60777525_60777563	0.489129	UUGGCAA	ENSMUST00000056907.6|Smcr8|ENSMUSG00000049323.7|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human) 	ENSMUST00000102667.3|Smcr8|ENSMUSG00000049323.7|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)
mm10_v2_chr6_-_30304513_30304570	0.486478	UUGGCAA	ENSMUST00000094543.2|Ube2h|ENSMUSG00000039159.10|ubiquitin-conjugating enzyme E2H 	ENSMUST00000102993.3|Ube2h|ENSMUSG00000039159.10|ubiquitin-conjugating enzyme E2H
mm10_v2_chr1_+_181150926_181150984	0.483111	UUGGCAA	ENSMUST00000134115.1|Cnih4|ENSMUSG00000062169.7|cornichon homolog 4 (Drosophila) 	ENSMUST00000111059.1|Cnih4|ENSMUSG00000062169.7|cornichon homolog 4 (Drosophila)
mm10_v2_chr1_+_179960472_179960585	0.482666	UUGGCAA	ENSMUST00000097453.2|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000111117.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr17_-_27820534_27820572	0.477525	UUGGCAA	ENSMUST00000075076.4|D17Wsu92e|ENSMUSG00000056692.6|DNA segment, Chr 17, Wayne State University 92, expressed 	ENSMUST00000114863.2|D17Wsu92e|ENSMUSG00000056692.6|DNA segment, Chr 17, Wayne State University 92, expressed
mm10_v2_chr11_+_52232009_52232041	0.475978	UUGGCAA	ENSMUST00000037324.5|Skp1a|ENSMUSG00000036309.8|S-phase kinase-associated protein 1A 	ENSMUST00000166537.1|Skp1a|ENSMUSG00000036309.8|S-phase kinase-associated protein 1A
mm10_v2_chr19_+_21272276_21272296	0.474573	UUGGCAA	ENSMUST00000025659.4|Zfand5|ENSMUSG00000024750.4|zinc finger, AN1-type domain 5
mm10_v2_chr13_-_81710937_81711013	0.473424	UUGGCAA	ENSMUST00000161920.1|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G 	ENSMUST00000048993.5|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G
mm10_v2_chr11_+_53350783_53350833	0.472773	UUGGCAA	ENSMUST00000060945.5|Aff4|ENSMUSG00000049470.7|AF4/FMR2 family, member 4
mm10_v2_chr5_+_135064206_135064254	0.4718	UUGGCAA	ENSMUST00000071263.5|Dnajc30|ENSMUSG00000061118.7|DnaJ (Hsp40) homolog, subfamily C, member 30
mm10_v2_chr15_+_92051153_92051170	0.471004	UUGGCAA	ENSMUST00000169825.1|Cntn1|ENSMUSG00000055022.8|contactin 1
mm10_v2_chr18_-_14682756_14682914	0.47024	UUGGCAA	ENSMUST00000040964.6|Ss18|ENSMUSG00000037013.9|synovial sarcoma translocation, Chromosome 18 	ENSMUST00000092041.3|Ss18|ENSMUSG00000037013.9|synovial sarcoma translocation, Chromosome 18 	ENSMUST00000040924.7|Ss18|ENSMUSG00000037013.9|synovial sarcoma translocation, Chromosome 18
mm10_v2_chr5_+_65537209_65537233	0.465288	UUGGCAA	ENSMUST00000142407.1|Ube2k|ENSMUSG00000029203.10|ubiquitin-conjugating enzyme E2K
mm10_v2_chr4_+_45342063_45342134	0.464907	UUGGCAA	ENSMUST00000155551.1|Dcaf10|ENSMUSG00000035572.10|DDB1 and CUL4 associated factor 10
mm10_v2_chr5_+_35278566_35278566	0.462691	UUGGCAA	ENSMUST00000049545.5|Adra2c|ENSMUSG00000045318.5|adrenergic receptor, alpha 2c
mm10_v2_chr13_-_101768154_101768217	0.461386	UUGGCAA	ENSMUST00000055518.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr1_-_16519284_16519336	0.454745	UUGGCAA	ENSMUST00000162751.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000027052.6|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000149320.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr3_-_104961695_104961728	0.454329	UUGGCAA	ENSMUST00000029429.4|Wnt2b|ENSMUSG00000027840.4|wingless related MMTV integration site 2b
mm10_v2_chr4_-_110287479_110287534	0.454139	UUGGCAA	ENSMUST00000106598.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) 	ENSMUST00000102723.4|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) 	ENSMUST00000153906.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr1_+_151755339_151755393	0.453324	UUGGCAA	ENSMUST00000059498.5|Edem3|ENSMUSG00000043019.6|ER degradation enhancer, mannosidase alpha-like 3
mm10_v2_chr12_+_72761211_72761265	0.452316	UUGGCAA	ENSMUST00000021514.8|Ppm1a|ENSMUSG00000021096.10|protein phosphatase 1A, magnesium dependent, alpha isoform
mm10_v2_chr1_-_54557595_54557698	0.45035	UUGGCAA	ENSMUST00000097739.3|Pgap1|ENSMUSG00000073678.3|post-GPI attachment to proteins 1
mm10_v2_chr18_-_63692341_63692374	0.447352	UUGGCAA	ENSMUST00000025476.2|Txnl1|ENSMUSG00000024583.2|thioredoxin-like 1
mm10_v2_chr10_-_127263346_127263368	0.446847	UUGGCAA	ENSMUST00000099172.3|Kif5a|ENSMUSG00000074657.4|kinesin family member 5A
mm10_v2_chr1_-_163725123_163725232	0.444997	UUGGCAA	ENSMUST00000159679.1|Mettl11b|ENSMUSG00000040113.8|methyltransferase like 11B
mm10_v2_chr5_+_32611171_32611245	0.435382	UUGGCAA	ENSMUST00000072311.6|Yes1|ENSMUSG00000014932.9|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1 	ENSMUST00000168707.2|Yes1|ENSMUSG00000014932.9|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1
mm10_v2_chr1_+_139422196_139422383	0.43274	UUGGCAA	ENSMUST00000039867.7|Zbtb41|ENSMUSG00000033964.7|zinc finger and BTB domain containing 41 homolog
mm10_v2_chr11_-_120047070_120047129	0.430541	UUGGCAA	ENSMUST00000064307.3|Aatk|ENSMUSG00000025375.9|apoptosis-associated tyrosine kinase
mm10_v2_chr1_-_74124420_74124466	0.429127	UUGGCAA	ENSMUST00000169786.1|Tns1|ENSMUSG00000055322.8|tensin 1
mm10_v2_chrX_+_7884022_7884055	0.424011	UUGGCAA	ENSMUST00000115660.4|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2
mm10_v2_chr2_+_180042496_180042562	0.412642	UUGGCAA	ENSMUST00000041126.8|Ss18l1|ENSMUSG00000039086.9|synovial sarcoma translocation gene on chromosome 18-like 1
mm10_v2_chr8_+_9977707_9977725	0.404617	UUGGCAA	ENSMUST00000139793.1|Abhd13|ENSMUSG00000040396.6|abhydrolase domain containing 13 	ENSMUST00000048216.5|Abhd13|ENSMUSG00000040396.6|abhydrolase domain containing 13
mm10_v2_chr12_-_34528844_34528904	0.401403	UUGGCAA	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr3_-_131272077_131272101	0.400636	UUGGCAA	ENSMUST00000029610.8|Hadh|ENSMUSG00000027984.8|hydroxyacyl-Coenzyme A dehydrogenase
mm10_v2_chr11_+_117199641_117199663	0.4004	UUGGCAA	ENSMUST00000093907.4|Sept9|ENSMUSG00000059248.7|septin 9
mm10_v2_chr19_+_4510472_4510487	0.399104	UUGGCAA	ENSMUST00000068004.6|Pcx|ENSMUSG00000024892.9|pyruvate carboxylase
mm10_v2_chr2_+_83644435_83644490	0.39847	UUGGCAA	ENSMUST00000081591.6|Zc3h15|ENSMUSG00000027091.8|zinc finger CCCH-type containing 15
mm10_v2_chr13_+_73604002_73604120	0.397407	UUGGCAA	ENSMUST00000022102.7|Clptm1l|ENSMUSG00000021610.7|CLPTM1-like
mm10_v2_chr6_+_34709442_34709497	0.396525	UUGGCAA	ENSMUST00000115021.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr12_-_31713873_31713947	0.396456	UUGGCAA	ENSMUST00000057783.4|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000174480.2|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000176710.1|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22
mm10_v2_chr5_+_123907175_123907292	0.394757	UUGGCAA	ENSMUST00000023869.8|Denr|ENSMUSG00000023106.9|density-regulated protein
mm10_v2_chr6_+_4600840_4600956	0.389862	UUGGCAA	ENSMUST00000015333.5|Casd1|ENSMUSG00000015189.6|CAS1 domain containing 1
mm10_v2_chr8_+_124231359_124231450	0.388493	UUGGCAA	ENSMUST00000034458.8|Galnt2|ENSMUSG00000089704.3|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2
mm10_v2_chr7_+_97579868_97579901	0.388182	UUGGCAA	ENSMUST00000042399.7|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1 	ENSMUST00000107153.1|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1
mm10_v2_chr5_-_143527977_143528036	0.386548	UUGGCAA	ENSMUST00000100489.3|Rac1|ENSMUSG00000001847.8|RAS-related C3 botulinum substrate 1 	ENSMUST00000080537.7|Rac1|ENSMUSG00000001847.8|RAS-related C3 botulinum substrate 1
mm10_v2_chr18_+_14783238_14783259	0.380749	UUGGCAA	ENSMUST00000169862.1|Taf4b|ENSMUSG00000054321.6|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr4_-_150003130_150003149	0.375548	UUGGCAA	ENSMUST00000084117.6|H6pd|ENSMUSG00000028980.8|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
mm10_v2_chr3_+_108284089_108284100	0.372359	UUGGCAA	ENSMUST00000102632.4|Sort1|ENSMUSG00000068747.8|sortilin 1
mm10_v2_chrX_-_13846508_13846591	0.372311	UUGGCAA	ENSMUST00000115436.2|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000033321.4|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000115438.3|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm10_v2_chr19_-_42752710_42752775	0.372095	UUGGCAA	ENSMUST00000076505.3|Pyroxd2|ENSMUSG00000060224.3|pyridine nucleotide-disulphide oxidoreductase domain 2
mm10_v2_chr4_+_106316187_106316243	0.371803	UUGGCAA	ENSMUST00000165709.1|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24 	ENSMUST00000106798.1|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24 	ENSMUST00000094933.4|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24
mm10_v2_chr1_+_158362261_158362304	0.37103	UUGGCAA	ENSMUST00000046110.9|Astn1|ENSMUSG00000026587.9|astrotactin 1
mm10_v2_chr2_+_127247908_127247997	0.368447	UUGGCAA	ENSMUST00000035871.8|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127 	ENSMUST00000174503.1|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127 	ENSMUST00000174288.1|Tmem127|ENSMUSG00000034850.9|transmembrane protein 127
mm10_v2_chr7_-_128740471_128740525	0.367323	UUGGCAA	ENSMUST00000119081.1|Mcmbp|ENSMUSG00000048170.8|MCM (minichromosome maintenance deficient) binding protein 	ENSMUST00000057557.7|Mcmbp|ENSMUSG00000048170.8|MCM (minichromosome maintenance deficient) binding protein
mm10_v2_chr3_+_34649987_34650005	0.363137	UUGGCAA	ENSMUST00000099151.2|Sox2|ENSMUSG00000074637.4|SRY-box containing gene 2
mm10_v2_chr5_+_144100387_144100436	0.358243	UUGGCAA	ENSMUST00000041804.7|Lmtk2|ENSMUSG00000038970.7|lemur tyrosine kinase 2
mm10_v2_chrX_-_12762069_12762080	0.356698	UUGGCAA	ENSMUST00000096495.4|Med14|ENSMUSG00000064127.7|mediator complex subunit 14 	ENSMUST00000076016.5|Med14|ENSMUSG00000064127.7|mediator complex subunit 14
mm10_v2_chr7_+_141455198_141455219	0.355318	UUGGCAA	ENSMUST00000164016.1|Pnpla2|ENSMUSG00000025509.9|patatin-like phospholipase domain containing 2 	ENSMUST00000064151.6|Pnpla2|ENSMUSG00000025509.9|patatin-like phospholipase domain containing 2 	ENSMUST00000169665.1|Pnpla2|ENSMUSG00000025509.9|patatin-like phospholipase domain containing 2
mm10_v2_chr19_+_40831248_40831292	0.35068	UUGGCAA	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr18_+_40258361_40258361	0.350259	UUGGCAA	ENSMUST00000091927.4|Kctd16|ENSMUSG00000051401.6|potassium channel tetramerisation domain containing 16
mm10_v2_chr8_+_117157972_117158137	0.33819	UUGGCAA	ENSMUST00000064488.4|Gan|ENSMUSG00000052557.5|giant axonal neuropathy 	ENSMUST00000162997.1|Gan|ENSMUSG00000052557.5|giant axonal neuropathy
mm10_v2_chr18_+_32163073_32163115	0.337313	UUGGCAA	ENSMUST00000096575.3|Map3k2|ENSMUSG00000024383.8|mitogen-activated protein kinase kinase kinase 2
mm10_v2_chrX_-_140062550_140062583	0.336998	UUGGCAA	ENSMUST00000124075.1|Nup62cl|ENSMUSG00000072944.5|nucleoporin 62 C-terminal like 	ENSMUST00000101212.2|Nup62cl|ENSMUSG00000072944.5|nucleoporin 62 C-terminal like 	ENSMUST00000125678.2|Nup62cl|ENSMUSG00000072944.5|nucleoporin 62 C-terminal like
mm10_v2_chr15_+_102279446_102279475	0.333854	UUGGCAA	ENSMUST00000051341.4|Mfsd5|ENSMUSG00000045665.4|major facilitator superfamily domain containing 5
mm10_v2_chr2_-_130840091_130840150	0.323797	UUGGCAA	ENSMUST00000044766.8|4930402H24Rik|ENSMUSG00000027309.12|RIKEN cDNA 4930402H24 gene 	ENSMUST00000138990.1|4930402H24Rik|ENSMUSG00000027309.12|RIKEN cDNA 4930402H24 gene 	ENSMUST00000120316.1|4930402H24Rik|ENSMUSG00000027309.12|RIKEN cDNA 4930402H24 gene 	ENSMUST00000110243.1|4930402H24Rik|ENSMUSG00000027309.12|RIKEN cDNA 4930402H24 gene
mm10_v2_chr2_-_104816696_104816792	0.321607	UUGGCAA	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr4_+_120854786_120854843	0.321477	UUGGCAA	ENSMUST00000071093.2|Rims3|ENSMUSG00000032890.11|regulating synaptic membrane exocytosis 3
mm10_v2_chr2_-_120850389_120850418	0.321365	UUGGCAA	ENSMUST00000143051.1|Ttbk2|ENSMUSG00000090100.1|tau tubulin kinase 2 	ENSMUST00000057135.7|Ttbk2|ENSMUSG00000090100.1|tau tubulin kinase 2 	ENSMUST00000085840.4|Ttbk2|ENSMUSG00000090100.1|tau tubulin kinase 2
mm10_v2_chr1_+_61638819_61638841	0.314979	UUGGCAA	ENSMUST00000138768.1|Pard3b|ENSMUSG00000052062.8|par-3 partitioning defective 3 homolog B (C. elegans) 	ENSMUST00000075374.3|Pard3b|ENSMUSG00000052062.8|par-3 partitioning defective 3 homolog B (C. elegans)
mm10_v2_chr14_+_26638074_26638151	0.313925	UUGGCAA	ENSMUST00000022429.2|Arf4|ENSMUSG00000021877.5|ADP-ribosylation factor 4
mm10_v2_chr3_+_121426495_121426541	0.310153	UUGGCAA	ENSMUST00000029773.8|Cnn3|ENSMUSG00000053931.7|calponin 3, acidic
mm10_v2_chr14_+_14703025_14703073	0.305975	UUGGCAA	ENSMUST00000057015.6|Slc4a7|ENSMUSG00000021733.9|solute carrier family 4, sodium bicarbonate cotransporter, member 7
mm10_v2_chr2_+_122028544_122028563	0.305098	UUGGCAA	ENSMUST00000028668.7|Eif3j1|ENSMUSG00000027236.8|eukaryotic translation initiation factor 3, subunit J1
mm10_v2_chr10_+_69212634_69212667	0.304169	UUGGCAA	ENSMUST00000020101.5|Rhobtb1|ENSMUSG00000019944.8|Rho-related BTB domain containing 1
mm10_v2_chr10_+_29211637_29211649	0.302966	UUGGCAA	ENSMUST00000092627.4|9330159F19Rik|ENSMUSG00000004360.8|RIKEN cDNA 9330159F19 gene
mm10_v2_chr13_-_54687696_54687809	0.301689	UUGGCAA	ENSMUST00000177950.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44 	ENSMUST00000146931.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44
mm10_v2_chr8_-_47990535_47990577	0.298803	UUGGCAA	ENSMUST00000057561.7|Wwc2|ENSMUSG00000031563.7|WW, C2 and coiled-coil domain containing 2
mm10_v2_chr3_-_122619663_122619680	0.298761	UUGGCAA	ENSMUST00000162409.1|Fnbp1l|ENSMUSG00000039735.9|formin binding protein 1-like
mm10_v2_chr13_-_116309639_116309699	0.295238	UUGGCAA	ENSMUST00000036060.6|Isl1|ENSMUSG00000042258.7|ISL1 transcription factor, LIM/homeodomain
mm10_v2_chr5_+_69556924_69557018	0.295072	UUGGCAA	ENSMUST00000087228.4|Guf1|ENSMUSG00000029208.10|GUF1 GTPase homolog (S. cerevisiae) 	ENSMUST00000031113.6|Guf1|ENSMUSG00000029208.10|GUF1 GTPase homolog (S. cerevisiae)
mm10_v2_chrX_-_108834303_108834381	0.294159	UUGGCAA	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chr11_+_77216180_77216287	0.290113	UUGGCAA	ENSMUST00000037912.5|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila) 	ENSMUST00000156488.1|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila)
mm10_v2_chr2_-_92459709_92459794	0.282647	UUGGCAA	ENSMUST00000136718.1|Slc35c1|ENSMUSG00000049922.8|solute carrier family 35, member C1 	ENSMUST00000067631.6|Slc35c1|ENSMUSG00000049922.8|solute carrier family 35, member C1
mm10_v2_chr5_-_135934590_135934613	0.281663	UUGGCAA	ENSMUST00000055808.5|Ywhag|ENSMUSG00000051391.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
mm10_v2_chr2_+_25255439_25255486	0.281315	UUGGCAA	ENSMUST00000104998.3|Tmem203|ENSMUSG00000078201.4|transmembrane protein 203
mm10_v2_chr7_-_63938862_63938933	0.280545	UUGGCAA	ENSMUST00000063694.8|Klf13|ENSMUSG00000052040.9|Kruppel-like factor 13
mm10_v2_chr18_+_34758890_34758906	0.275488	UUGGCAA	ENSMUST00000049281.5|Fam53c|ENSMUSG00000034300.10|family with sequence similarity 53, member C
mm10_v2_chr12_-_59219725_59219776	0.272952	UUGGCAA	ENSMUST00000043204.7|Fbxo33|ENSMUSG00000035329.7|F-box protein 33
mm10_v2_chr3_-_142881942_142882017	0.272294	UUGGCAA	ENSMUST00000043812.8|Pkn2|ENSMUSG00000004591.10|protein kinase N2
mm10_v2_chr3_+_32436151_32436151	0.267888	UUGGCAA	ENSMUST00000029201.7|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr8_-_79399513_79399532	0.267449	UUGGCAA	ENSMUST00000066091.7|Smad1|ENSMUSG00000031681.8|SMAD family member 1 	ENSMUST00000109885.1|Smad1|ENSMUSG00000031681.8|SMAD family member 1 	ENSMUST00000066081.3|Smad1|ENSMUSG00000031681.8|SMAD family member 1
mm10_v2_chr5_+_108461222_108461241	0.26609	UUGGCAA	ENSMUST00000046975.5|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3 	ENSMUST00000112597.1|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3
mm10_v2_chr4_-_20778527_20778593	0.264927	UUGGCAA	ENSMUST00000119374.1|Nkain3|ENSMUSG00000055761.8|Na+/K+ transporting ATPase interacting 3
mm10_v2_chr16_+_97356721_97356732	0.263964	UUGGCAA	ENSMUST00000047275.6|Bace2|ENSMUSG00000040605.6|beta-site APP-cleaving enzyme 2
mm10_v2_chr3_-_53463234_53463306	0.26314	UUGGCAA	ENSMUST00000056749.7|Nhlrc3|ENSMUSG00000042997.7|NHL repeat containing 3
mm10_v2_chr15_-_53902472_53902530	0.25983	UUGGCAA	ENSMUST00000078673.6|Samd12|ENSMUSG00000058656.6|sterile alpha motif domain containing 12
mm10_v2_chr3_-_19163011_19163085	0.259437	UUGGCAA	ENSMUST00000029125.8|Armc1|ENSMUSG00000027599.8|armadillo repeat containing 1
mm10_v2_chr7_-_116237767_116237781	0.256206	UUGGCAA	ENSMUST00000182834.1|Plekha7|ENSMUSG00000045659.11|pleckstrin homology domain containing, family A member 7
mm10_v2_chr16_-_94997653_94997704	0.25564	UUGGCAA	ENSMUST00000095873.4|Kcnj6|ENSMUSG00000043301.9|potassium inwardly-rectifying channel, subfamily J, member 6 	ENSMUST00000099508.2|Kcnj6|ENSMUSG00000043301.9|potassium inwardly-rectifying channel, subfamily J, member 6
mm10_v2_chr3_+_41555723_41555745	0.255137	UUGGCAA	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr19_+_38264761_38264831	0.250786	UUGGCAA	ENSMUST00000087252.5|Lgi1|ENSMUSG00000067242.5|leucine-rich repeat LGI family, member 1
mm10_v2_chr7_+_79273201_79273270	0.248571	UUGGCAA	ENSMUST00000037315.6|Abhd2|ENSMUSG00000039202.6|abhydrolase domain containing 2
mm10_v2_chr9_+_107533945_107534024	0.24745	UUGGCAA	ENSMUST00000010189.1|Tmem115|ENSMUSG00000010045.1|transmembrane protein 115
mm10_v2_chr2_+_72285637_72285749	0.247243	UUGGCAA	ENSMUST00000090824.5|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK 	ENSMUST00000135469.1|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK
mm10_v2_chr3_+_27938638_27938695	0.246836	UUGGCAA	ENSMUST00000120834.1|Pld1|ENSMUSG00000027695.10|phospholipase D1
mm10_v2_chr4_-_3574844_3574853	0.24649	UUGGCAA	ENSMUST00000029891.5|Tmem68|ENSMUSG00000028232.7|transmembrane protein 68
mm10_v2_chr10_-_128696257_128696273	0.246139	UUGGCAA	ENSMUST00000000727.2|Rab5b|ENSMUSG00000000711.2|RAB5B, member RAS oncogene family
mm10_v2_chr6_-_134566913_134566995	0.244462	UUGGCAA	ENSMUST00000032322.8|Lrp6|ENSMUSG00000030201.9|low density lipoprotein receptor-related protein 6
mm10_v2_chr6_-_85502980_85503034	0.243908	UUGGCAA	ENSMUST00000159062.1|Fbxo41|ENSMUSG00000047013.9|F-box protein 41
mm10_v2_chr16_+_92058270_92058328	0.24339	UUGGCAA	ENSMUST00000047429.8|Mrps6|ENSMUSG00000039680.9|mitochondrial ribosomal protein S6 	ENSMUST00000113975.2|Slc5a3|ENSMUSG00000089774.2|solute carrier family 5 (inositol transporters), member 3
mm10_v2_chr5_-_93045022_93045064	0.237804	UUGGCAA	ENSMUST00000061328.5|Sowahb|ENSMUSG00000045314.5|sosondowah ankyrin repeat domain family member B
mm10_v2_chr9_-_119322421_119322449	0.23461	UUGGCAA	ENSMUST00000040853.4|Oxsr1|ENSMUSG00000036737.6|oxidative-stress responsive 1
mm10_v2_chr7_-_35754394_35754454	0.233611	UUGGCAA	ENSMUST00000051377.8|Dpy19l3|ENSMUSG00000043671.8|dpy-19-like 3 (C. elegans)
mm10_v2_chr6_+_72347301_72347379	0.232526	UUGGCAA	ENSMUST00000077783.3|0610030E20Rik|ENSMUSG00000058706.3|RIKEN cDNA 0610030E20 gene
mm10_v2_chrX_+_73716577_73716618	0.229955	UUGGCAA	ENSMUST00000002084.7|Abcd1|ENSMUSG00000031378.8|ATP-binding cassette, sub-family D (ALD), member 1
mm10_v2_chr11_-_98193260_98193298	0.229011	UUGGCAA	ENSMUST00000092735.5|Med1|ENSMUSG00000018160.9|mediator complex subunit 1 	ENSMUST00000107545.2|Med1|ENSMUSG00000018160.9|mediator complex subunit 1
mm10_v2_chr11_-_22982090_22982382	0.227175	UUGGCAA	ENSMUST00000160826.1|RP23-242C19.7|ENSMUSG00000098650.1|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3gnt2), transcript variant 2, mRNA 	ENSMUST00000093270.5|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000071068.8|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000159081.1|Commd1|ENSMUSG00000051355.12|COMM domain containing 1
mm10_v2_chr8_+_22192800_22192856	0.22526	UUGGCAA	ENSMUST00000033866.8|Vps36|ENSMUSG00000031479.8|vacuolar protein sorting 36 (yeast)
mm10_v2_chr11_+_110399115_110399155	0.225122	UUGGCAA	ENSMUST00000020949.5|Map2k6|ENSMUSG00000020623.5|mitogen-activated protein kinase kinase 6 	ENSMUST00000100260.1|Map2k6|ENSMUSG00000020623.5|mitogen-activated protein kinase kinase 6
mm10_v2_chr4_+_48045144_48045160	0.220332	UUGGCAA	ENSMUST00000030025.3|Nr4a3|ENSMUSG00000028341.3|nuclear receptor subfamily 4, group A, member 3
mm10_v2_chr9_+_3532295_3532354	0.218783	UUGGCAA	ENSMUST00000115733.1|Gucy1a2|ENSMUSG00000041624.9|guanylate cyclase 1, soluble, alpha 2
mm10_v2_chrX_-_23365044_23365090	0.214931	UUGGCAA	ENSMUST00000115313.1|Klhl13|ENSMUSG00000036782.7|kelch-like 13
mm10_v2_chr19_+_55742242_55742468	0.213684	UUGGCAA	ENSMUST00000111652.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111649.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111651.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111653.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111656.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000127233.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000153888.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr16_+_4726357_4726370	0.213182	UUGGCAA	ENSMUST00000154117.1|Hmox2|ENSMUSG00000004070.9|heme oxygenase (decycling) 2 	ENSMUST00000004172.8|Hmox2|ENSMUSG00000004070.9|heme oxygenase (decycling) 2
mm10_v2_chr6_-_72899952_72899985	0.21107	UUGGCAA	ENSMUST00000068697.8|Kcmf1|ENSMUSG00000055239.8|potassium channel modulatory factor 1
mm10_v2_chr7_+_45783686_45783801	0.201967	UUGGCAA	ENSMUST00000118564.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3 	ENSMUST00000133428.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3
mm10_v2_chr6_+_103510874_103510898	0.198699	UUGGCAA	ENSMUST00000066905.6|Chl1|ENSMUSG00000030077.9|cell adhesion molecule with homology to L1CAM
mm10_v2_chr5_+_88720855_88720876	0.198593	UUGGCAA	ENSMUST00000113229.1|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B 	ENSMUST00000006424.7|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B
mm10_v2_chr3_+_107101551_107101567	0.194893	UUGGCAA	ENSMUST00000038695.1|Kcna2|ENSMUSG00000040724.1|potassium voltage-gated channel, shaker-related subfamily, member 2
mm10_v2_chr17_-_26508463_26508519	0.194032	UUGGCAA	ENSMUST00000025025.6|Dusp1|ENSMUSG00000024190.6|dual specificity phosphatase 1
mm10_v2_chr1_-_79671966_79671993	0.192815	UUGGCAA	ENSMUST00000162342.1|Ap1s3|ENSMUSG00000054702.8|adaptor-related protein complex AP-1, sigma 3
mm10_v2_chr12_+_4592992_4593087	0.191044	UUGGCAA	ENSMUST00000062580.7|Itsn2|ENSMUSG00000020640.9|intersectin 2
mm10_v2_chr8_-_29219338_29219338	0.189535	UUGGCAA	ENSMUST00000168630.2|Unc5d|ENSMUSG00000063626.5|unc-5 homolog D (C. elegans)
mm10_v2_chr11_+_96034885_96034965	0.188264	UUGGCAA	ENSMUST00000006217.3|Snf8|ENSMUSG00000006058.4|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) 	ENSMUST00000107700.3|Snf8|ENSMUSG00000006058.4|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)
mm10_v2_chr8_-_86885222_86885282	0.185277	UUGGCAA	ENSMUST00000034074.7|N4bp1|ENSMUSG00000031652.10|NEDD4 binding protein 1
mm10_v2_chr7_+_45872772_45872857	0.184	UUGGCAA	ENSMUST00000002855.5|Kdelr1|ENSMUSG00000002778.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 	ENSMUST00000107719.1|Kdelr1|ENSMUSG00000002778.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
mm10_v2_chr12_+_117516479_117516534	0.178087	UUGGCAA	ENSMUST00000109691.2|Rapgef5|ENSMUSG00000041992.8|Rap guanine nucleotide exchange factor (GEF) 5
mm10_v2_chr5_-_149636331_149636376	0.174488	UUGGCAA	ENSMUST00000074846.7|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000110498.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000127977.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000132412.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1
mm10_v2_chr7_+_101108768_101108783	0.17357	UUGGCAA	ENSMUST00000098250.3|Fchsd2|ENSMUSG00000030691.8|FCH and double SH3 domains 2 	ENSMUST00000032931.7|Fchsd2|ENSMUSG00000030691.8|FCH and double SH3 domains 2
mm10_v2_chr18_+_62324204_62324248	0.173219	UUGGCAA	ENSMUST00000027560.6|Htr4|ENSMUSG00000026322.8|5 hydroxytryptamine (serotonin) receptor 4
mm10_v2_chr9_-_101251810_101251839	0.170586	UUGGCAA	ENSMUST00000075941.5|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr10_+_17723220_17723229	0.169355	UUGGCAA	ENSMUST00000038107.7|Cited2|ENSMUSG00000039910.9|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
mm10_v2_chr1_-_3671498_3671498	0.165117	UUGGCAA	ENSMUST00000070533.4|Xkr4|ENSMUSG00000051951.5|X Kell blood group precursor related family member 4
mm10_v2_chr6_+_39381175_39381175	0.164405	UUGGCAA	ENSMUST00000031986.4|Rab19|ENSMUSG00000029923.4|RAB19, member RAS oncogene family
mm10_v2_chr3_-_51560816_51560878	0.161077	UUGGCAA	ENSMUST00000037141.7|Setd7|ENSMUSG00000037111.8|SET domain containing (lysine methyltransferase) 7
mm10_v2_chr15_+_66577536_66577637	0.160053	UUGGCAA	ENSMUST00000048188.8|Phf20l1|ENSMUSG00000072501.4|PHD finger protein 20-like 1
mm10_v2_chr15_-_93275151_93275178	0.159725	UUGGCAA	ENSMUST00000057896.4|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1 	ENSMUST00000049484.6|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1
mm10_v2_chr3_+_88685785_88685796	0.15932	UUGGCAA	ENSMUST00000029696.6|2810403A07Rik|ENSMUSG00000028060.10|RIKEN cDNA 2810403A07 gene
mm10_v2_chr9_-_95511897_95511996	0.159093	UUGGCAA	ENSMUST00000079659.5|U2surp|ENSMUSG00000032407.7|U2 snRNP-associated SURP domain containing 	ENSMUST00000078374.6|U2surp|ENSMUSG00000032407.7|U2 snRNP-associated SURP domain containing
mm10_v2_chr3_-_31310349_31310378	0.156592	UUGGCAA	ENSMUST00000091259.2|Slc7a14|ENSMUSG00000069072.3|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14
mm10_v2_chr11_-_101466222_101466237	0.156418	UUGGCAA	ENSMUST00000040430.7|Vat1|ENSMUSG00000034993.7|vesicle amine transport protein 1 homolog (T californica)
mm10_v2_chr11_+_109649376_109649437	0.149945	UUGGCAA	ENSMUST00000106677.1|Prkar1a|ENSMUSG00000020612.10|protein kinase, cAMP dependent regulatory, type I, alpha
mm10_v2_chrX_+_101640056_101640108	0.148673	UUGGCAA	ENSMUST00000119299.1|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) 	ENSMUST00000044475.4|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm10_v2_chr12_+_71831064_71831178	0.146644	UUGGCAA	ENSMUST00000085299.2|Daam1|ENSMUSG00000034574.9|dishevelled associated activator of morphogenesis 1
mm10_v2_chr13_+_105443693_105443693	0.146425	UUGGCAA	ENSMUST00000022235.4|Htr1a|ENSMUSG00000021721.4|5-hydroxytryptamine (serotonin) receptor 1A
mm10_v2_chr15_+_58889208_58889231	0.143248	UUGGCAA	ENSMUST00000036904.6|Rnf139|ENSMUSG00000037075.6|ring finger protein 139
mm10_v2_chr13_+_55209776_55209788	0.134927	UUGGCAA	ENSMUST00000099490.2|Nsd1|ENSMUSG00000021488.7|nuclear receptor-binding SET-domain protein 1
mm10_v2_chr16_-_67620880_67620922	0.130746	UUGGCAA	ENSMUST00000114292.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2 	ENSMUST00000120898.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2
mm10_v2_chr2_-_132145057_132145118	0.128204	UUGGCAA	ENSMUST00000028815.8|Slc23a2|ENSMUSG00000027340.9|solute carrier family 23 (nucleobase transporters), member 2
mm10_v2_chr14_-_67314711_67314711	0.122872	UUGGCAA	ENSMUST00000100448.2|Gm6878|ENSMUSG00000075549.2|predicted gene 6878
mm10_v2_chr11_+_17159263_17159357	0.120113	UUGGCAA	ENSMUST00000102880.4|Ppp3r1|ENSMUSG00000033953.10|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm10_v2_chr16_+_16896469_16896598	0.120109	UUGGCAA	ENSMUST00000027373.9|Ppm1f|ENSMUSG00000026181.11|protein phosphatase 1F (PP2C domain containing)
mm10_v2_chr13_+_56609516_56609606	0.119366	UUGGCAA	ENSMUST00000045173.8|Tgfbi|ENSMUSG00000035493.9|transforming growth factor, beta induced
mm10_v2_chr2_-_72980402_72980471	0.112436	UUGGCAA	ENSMUST00000066003.6|Sp3|ENSMUSG00000027109.10|trans-acting transcription factor 3 	ENSMUST00000102689.3|Sp3|ENSMUSG00000027109.10|trans-acting transcription factor 3
mm10_v2_chr4_-_73790602_73790709	0.109326	UUGGCAA	ENSMUST00000058292.6|Rasef|ENSMUSG00000043003.7|RAS and EF hand domain containing 	ENSMUST00000102837.2|Rasef|ENSMUSG00000043003.7|RAS and EF hand domain containing
mm10_v2_chr6_-_128143525_128143594	0.108662	UUGGCAA	ENSMUST00000032503.5|Tspan9|ENSMUSG00000030352.8|tetraspanin 9 	ENSMUST00000112173.1|Tspan9|ENSMUSG00000030352.8|tetraspanin 9
mm10_v2_chr4_-_91372028_91372069	0.105399	UUGGCAA	ENSMUST00000107110.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000008633.8|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107118.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr16_+_33251415_33251456	0.103802	UUGGCAA	ENSMUST00000023502.4|Snx4|ENSMUSG00000022808.4|sorting nexin 4
mm10_v2_chr13_-_98891036_98891063	0.102344	UUGGCAA	ENSMUST00000109399.2|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr7_+_87602544_87602544	0.102187	UUGGCAA	ENSMUST00000167164.1|Grm5|ENSMUSG00000049583.8|glutamate receptor, metabotropic 5 	ENSMUST00000107263.2|Grm5|ENSMUSG00000049583.8|glutamate receptor, metabotropic 5
mm10_v2_chr7_-_46958475_46958527	0.0994229	UUGGCAA	ENSMUST00000094398.4|Uevld|ENSMUSG00000043262.8|UEV and lactate/malate dehyrogenase domains
mm10_v2_chr4_+_117096049_117096083	0.0953734	UUGGCAA	ENSMUST00000030443.5|Ptch2|ENSMUSG00000028681.5|patched homolog 2
mm10_v2_chrX_+_18162575_18162657	0.0936195	UUGGCAA	ENSMUST00000044484.6|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A 	ENSMUST00000052368.8|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A
mm10_v2_chr2_+_26916360_26916396	0.0915722	UUGGCAA	ENSMUST00000015017.7|Surf2|ENSMUSG00000014873.9|surfeit gene 2
mm10_v2_chr2_-_147186389_147186413	0.0914741	UUGGCAA	ENSMUST00000109970.3|Nkx2-2|ENSMUSG00000027434.10|NK2 homeobox 2 	ENSMUST00000067075.5|Nkx2-2|ENSMUSG00000027434.10|NK2 homeobox 2
mm10_v2_chr9_+_102506072_102506138	0.0913815	UUGGCAA	ENSMUST00000039390.4|Ky|ENSMUSG00000035606.7|kyphoscoliosis peptidase
mm10_v2_chr2_-_30474199_30474222	0.0903674	UUGGCAA	ENSMUST00000065134.2|Ier5l|ENSMUSG00000089762.2|immediate early response 5-like
mm10_v2_chr1_-_182341585_182341625	0.090252	UUGGCAA	ENSMUST00000051431.4|Fbxo28|ENSMUSG00000047539.4|F-box protein 28
mm10_v2_chr19_+_27322539_27322592	0.0898862	UUGGCAA	ENSMUST00000056708.3|Kcnv2|ENSMUSG00000047298.3|potassium channel, subfamily V, member 2
mm10_v2_chr5_+_29569208_29569267	0.0883306	UUGGCAA	ENSMUST00000049453.4|Ube3c|ENSMUSG00000039000.4|ubiquitin protein ligase E3C
mm10_v2_chr17_-_10319324_10319380	0.0877004	UUGGCAA	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr7_+_139389072_139389161	0.086391	UUGGCAA	ENSMUST00000106098.1|Inpp5a|ENSMUSG00000025477.7|inositol polyphosphate-5-phosphatase A 	ENSMUST00000026550.7|Inpp5a|ENSMUSG00000025477.7|inositol polyphosphate-5-phosphatase A
mm10_v2_chr14_-_54577578_54577661	0.0863708	UUGGCAA	ENSMUST00000054487.8|Ajuba|ENSMUSG00000022178.10|ajuba LIM protein
mm10_v2_chr14_-_70351354_70351435	0.0854382	UUGGCAA	ENSMUST00000143153.1|Slc39a14|ENSMUSG00000022094.9|solute carrier family 39 (zinc transporter), member 14 	ENSMUST00000127000.1|Slc39a14|ENSMUSG00000022094.9|solute carrier family 39 (zinc transporter), member 14 	ENSMUST00000068044.7|Slc39a14|ENSMUSG00000022094.9|solute carrier family 39 (zinc transporter), member 14 	ENSMUST00000022688.3|Slc39a14|ENSMUSG00000022094.9|solute carrier family 39 (zinc transporter), member 14
mm10_v2_chr2_-_84650714_84650749	0.0847416	UUGGCAA	ENSMUST00000111697.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111670.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111696.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111678.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111690.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111695.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111677.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111698.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000099941.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111676.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111694.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111675.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111689.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111687.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111692.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111685.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111686.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111688.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111693.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111684.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1
mm10_v2_chr11_+_75531690_75531743	0.0844373	UUGGCAA	ENSMUST00000149727.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000042561.7|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000108433.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000143035.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2
mm10_v2_chr14_+_46882854_46882973	0.0788892	UUGGCAA	ENSMUST00000022386.8|Samd4|ENSMUSG00000021838.10|sterile alpha motif domain containing 4 	ENSMUST00000100672.3|Samd4|ENSMUSG00000021838.10|sterile alpha motif domain containing 4
mm10_v2_chr8_+_25602236_25602315	0.0779477	UUGGCAA	ENSMUST00000146919.1|Whsc1l1|ENSMUSG00000054823.9|Wolf-Hirschhorn syndrome candidate 1-like 1 (human) 	ENSMUST00000142395.1|Whsc1l1|ENSMUSG00000054823.9|Wolf-Hirschhorn syndrome candidate 1-like 1 (human) 	ENSMUST00000139966.1|Whsc1l1|ENSMUSG00000054823.9|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
mm10_v2_chr11_-_115699461_115699534	0.0729781	UUGGCAA	ENSMUST00000106497.1|Grb2|ENSMUSG00000059923.7|growth factor receptor bound protein 2
mm10_v2_chr13_+_8202860_8202871	0.0719475	UUGGCAA	ENSMUST00000064473.6|Adarb2|ENSMUSG00000052551.9|adenosine deaminase, RNA-specific, B2
mm10_v2_chr3_+_69316857_69316869	0.0712363	UUGGCAA	ENSMUST00000029355.6|Ppm1l|ENSMUSG00000027784.8|protein phosphatase 1 (formerly 2C)-like
mm10_v2_chr2_+_61804453_61804538	0.0712228	UUGGCAA	ENSMUST00000048934.8|Tbr1|ENSMUSG00000035033.9|T-box brain gene 1
mm10_v2_chr7_-_44997535_44997605	0.0697343	UUGGCAA	ENSMUST00000124232.1|Bcl2l12|ENSMUSG00000003190.5|BCL2-like 12 (proline rich) 	ENSMUST00000003290.4|Bcl2l12|ENSMUSG00000003190.5|BCL2-like 12 (proline rich)
mm10_v2_chr6_-_113501818_113501949	0.0675775	UUGGCAA	ENSMUST00000101059.1|Prrt3|ENSMUSG00000045009.7|proline-rich transmembrane protein 3
mm10_v2_chr2_+_14074091_14074146	0.0651327	UUGGCAA	ENSMUST00000102960.4|Stam|ENSMUSG00000026718.11|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
mm10_v2_chr16_+_44139821_44139900	0.0649697	UUGGCAA	ENSMUST00000159514.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000161326.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063520.8|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063542.7|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm10_v2_chr8_-_109737714_109737786	0.0635284	UUGGCAA	ENSMUST00000093162.3|Atxn1l|ENSMUSG00000069895.3|ataxin 1-like
mm10_v2_chr15_-_102257449_102257517	0.0620257	UUGGCAA	ENSMUST00000043172.8|Rarg|ENSMUSG00000001288.8|retinoic acid receptor, gamma
mm10_v2_chr5_+_32136458_32136505	0.0617739	UUGGCAA	ENSMUST00000031017.9|Fosl2|ENSMUSG00000029135.9|fos-like antigen 2
mm10_v2_chr15_+_8109313_8109356	0.0611647	UUGGCAA	ENSMUST00000163765.1|Nup155|ENSMUSG00000022142.7|nucleoporin 155
mm10_v2_chr17_-_42876417_42876431	0.0602854	UUGGCAA	ENSMUST00000024709.7|Cd2ap|ENSMUSG00000061665.6|CD2-associated protein
mm10_v2_chr11_+_32642826_32642875	0.0543055	UUGGCAA	ENSMUST00000093205.6|Fbxw11|ENSMUSG00000020271.11|F-box and WD-40 domain protein 11 	ENSMUST00000076383.7|Fbxw11|ENSMUSG00000020271.11|F-box and WD-40 domain protein 11
mm10_v2_chrX_+_47912387_47912442	0.0512668	UUGGCAA	ENSMUST00000001202.8|Ocrl|ENSMUSG00000001173.9|oculocerebrorenal syndrome of Lowe 	ENSMUST00000115020.1|Ocrl|ENSMUSG00000001173.9|oculocerebrorenal syndrome of Lowe
mm10_v2_chr8_-_115707778_115707794	0.0505633	UUGGCAA	ENSMUST00000109104.1|Maf|ENSMUSG00000055435.6|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm10_v2_chr10_+_81136223_81136271	0.0500803	UUGGCAA	ENSMUST00000048128.8|Zbtb7a|ENSMUSG00000035011.9|zinc finger and BTB domain containing 7a
mm10_v2_chr11_-_103412668_103412711	0.0492589	UUGGCAA	ENSMUST00000041272.9|Plekhm1|ENSMUSG00000034247.9|pleckstrin homology domain containing, family M (with RUN domain) member 1
mm10_v2_chr9_+_25252439_25252516	0.0491206	UUGGCAA	ENSMUST00000115272.2|Sept7|ENSMUSG00000001833.10|septin 7 	ENSMUST00000165594.2|Sept7|ENSMUSG00000001833.10|septin 7
mm10_v2_chr14_-_104467984_104468041	0.04254	UUGGCAA	ENSMUST00000053016.8|Pou4f1|ENSMUSG00000048349.8|POU domain, class 4, transcription factor 1
mm10_v2_chr9_-_27030010_27030114	0.0422454	UUGGCAA	ENSMUST00000034470.9|Vps26b|ENSMUSG00000031988.9|vacuolar protein sorting 26 homolog B (yeast)
mm10_v2_chrX_+_52912232_52912361	0.0331914	UUGGCAA	ENSMUST00000078944.6|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000101587.3|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000154864.2|Phf6|ENSMUSG00000025626.10|PHD finger protein 6
mm10_v2_chr17_+_35552128_35552182	0.0320004	UUGGCAA	ENSMUST00000044804.7|Cdsn|ENSMUSG00000039518.7|corneodesmosin
mm10_v2_chr10_+_76032598_76032660	0.0315461	UUGGCAA	ENSMUST00000061617.6|Zfp280b|ENSMUSG00000049764.7|zinc finger protein 280B
mm10_v2_chr13_+_34875488_34875515	0.0209314	UUGGCAA	ENSMUST00000077853.3|Prpf4b|ENSMUSG00000021413.8|PRP4 pre-mRNA processing factor 4 homolog B (yeast)
mm10_v2_chr8_+_119910792_119910857	0.0206761	UUGGCAA	ENSMUST00000108988.2|Usp10|ENSMUSG00000031826.13|ubiquitin specific peptidase 10 	ENSMUST00000127664.1|Gm20388|ENSMUSG00000092329.1|predicted gene 20388 	ENSMUST00000108982.4|Usp10|ENSMUSG00000031826.13|ubiquitin specific peptidase 10
mm10_v2_chr10_+_42678890_42678948	0.0206382	UUGGCAA	ENSMUST00000040718.5|Ostm1|ENSMUSG00000038280.6|osteopetrosis associated transmembrane protein 1
mm10_v2_chr2_-_167661496_167661591	0.0166925	UUGGCAA	ENSMUST00000125544.2|Gm20431|ENSMUSG00000089739.2|predicted gene 20431 	ENSMUST00000006587.6|Tmem189|ENSMUSG00000090213.1|transmembrane protein 189
mm10_v2_chr6_+_33249085_33249152	0.0166546	UUGGCAA	ENSMUST00000052266.8|Exoc4|ENSMUSG00000029763.11|exocyst complex component 4 	ENSMUST00000090381.4|Exoc4|ENSMUSG00000029763.11|exocyst complex component 4 	ENSMUST00000115080.1|Exoc4|ENSMUSG00000029763.11|exocyst complex component 4
mm10_v2_chr2_-_164656583_164656583	0.0152417	UUGGCAA	ENSMUST00000109335.1|Wfdc9|ENSMUSG00000074594.3|WAP four-disulfide core domain 9
mm10_v2_chr6_+_47835650_47835725	0.0142556	UUGGCAA	ENSMUST00000079881.4|Zfp398|ENSMUSG00000062519.7|zinc finger protein 398 	ENSMUST00000114598.1|Zfp398|ENSMUSG00000062519.7|zinc finger protein 398
mm10_v2_chr8_-_123212742_123212779	0.0120841	UUGGCAA	ENSMUST00000000759.8|Chmp1a|ENSMUSG00000000743.8|charged multivesicular body protein 1A
mm10_v2_chr3_-_110142996_110143010	0.0107871	UUGGCAA	ENSMUST00000156177.2|Ntng1|ENSMUSG00000059857.9|netrin G1
mm10_v2_chr4_+_43875524_43875558	0.00914046	UUGGCAA	ENSMUST00000030198.6|Reck|ENSMUSG00000028476.7|reversion-inducing-cysteine-rich protein with kazal motifs
mm10_v2_chr1_+_127204986_127205051	0.00471619	UUGGCAA	ENSMUST00000038361.4|Mgat5|ENSMUSG00000036155.7|mannoside acetylglucosaminyltransferase 5
