mm10_v2_chr6_+_86078070_86078089	1.38747	UGUGCUU	ENSMUST00000032069.5|Add2|ENSMUSG00000030000.8|adducin 2 (beta)
mm10_v2_chr3_+_14886426_14886426	1.21402	UGUGCUU	ENSMUST00000029078.7|Car2|ENSMUSG00000027562.7|carbonic anhydrase 2
mm10_v2_chr1_-_52952834_52952854	1.0514	UGUGCUU	ENSMUST00000050567.4|1700019D03Rik|ENSMUSG00000043629.6|RIKEN cDNA 1700019D03 gene
mm10_v2_chr9_-_66919646_66919710	0.948923	UGUGCUU	ENSMUST00000041139.7|Rab8b|ENSMUSG00000036943.8|RAB8B, member RAS oncogene family
mm10_v2_chr1_-_95667555_95667597	0.877436	UGUGCUU	ENSMUST00000043336.4|St8sia4|ENSMUSG00000040710.4|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm10_v2_chr1_-_193035651_193035728	0.850315	UGUGCUU	ENSMUST00000016344.7|Syt14|ENSMUSG00000016200.8|synaptotagmin XIV
mm10_v2_chr17_-_87797994_87798049	0.804418	UGUGCUU	ENSMUST00000055221.7|Kcnk12|ENSMUSG00000050138.7|potassium channel, subfamily K, member 12
mm10_v2_chr15_+_103240405_103240432	0.737658	UGUGCUU	ENSMUST00000036004.9|Hnrnpa1|ENSMUSG00000046434.9|heterogeneous nuclear ribonucleoprotein A1 	ENSMUST00000087351.7|Hnrnpa1|ENSMUSG00000046434.9|heterogeneous nuclear ribonucleoprotein A1
mm10_v2_chr16_-_43979050_43979093	0.701761	UGUGCUU	ENSMUST00000165648.1|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23 	ENSMUST00000036321.7|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23
mm10_v2_chr9_-_70657121_70657188	0.686381	UGUGCUU	ENSMUST00000049031.5|Fam63b|ENSMUSG00000042444.9|family with sequence similarity 63, member B
mm10_v2_chr9_-_108190352_108190420	0.680006	UGUGCUU	ENSMUST00000035208.7|Bsn|ENSMUSG00000032589.8|bassoon
mm10_v2_chr14_-_104522615_104522707	0.663617	UGUGCUU	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr4_-_4793275_4793382	0.660801	UGUGCUU	ENSMUST00000084949.2|Impad1|ENSMUSG00000066324.2|inositol monophosphatase domain containing 1
mm10_v2_chr13_+_83504032_83504050	0.656192	UGUGCUU	ENSMUST00000163888.1|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C 	ENSMUST00000005722.7|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C
mm10_v2_chr2_-_132029845_132030001	0.651519	UGUGCUU	ENSMUST00000028814.8|Rassf2|ENSMUSG00000027339.9|Ras association (RalGDS/AF-6) domain family member 2
mm10_v2_chr17_-_29888570_29888629	0.642803	UGUGCUU	ENSMUST00000171691.1|Mdga1|ENSMUSG00000043557.9|MAM domain containing glycosylphosphatidylinositol anchor 1
mm10_v2_chr16_-_15594507_15594531	0.641258	UGUGCUU	ENSMUST00000115776.1|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2 	ENSMUST00000115777.3|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2
mm10_v2_chrX_-_142966709_142966734	0.639692	UGUGCUU	ENSMUST00000041317.2|Ammecr1|ENSMUSG00000042225.3|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm10_v2_chr1_-_127677923_127678096	0.618812	UGUGCUU	ENSMUST00000160616.1|Tmem163|ENSMUSG00000026347.7|transmembrane protein 163
mm10_v2_chr1_+_64532790_64532815	0.615388	UGUGCUU	ENSMUST00000049932.5|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000087366.4|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000171164.1|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1
mm10_v2_chr13_-_52530827_52530841	0.61342	UGUGCUU	ENSMUST00000057442.6|Diras2|ENSMUSG00000047842.6|DIRAS family, GTP-binding RAS-like 2
mm10_v2_chr14_-_49066653_49066674	0.611973	UGUGCUU	ENSMUST00000162175.1|Exoc5|ENSMUSG00000061244.7|exocyst complex component 5
mm10_v2_chrX_+_159627265_159627298	0.605104	UGUGCUU	ENSMUST00000112456.2|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr3_+_132085281_132085299	0.600386	UGUGCUU	ENSMUST00000029665.5|Dkk2|ENSMUSG00000028031.5|dickkopf homolog 2 (Xenopus laevis)
mm10_v2_chr2_+_92915080_92915115	0.588675	UGUGCUU	ENSMUST00000028648.2|Syt13|ENSMUSG00000027220.2|synaptotagmin XIII
mm10_v2_chrX_-_94123359_94123412	0.568594	UGUGCUU	ENSMUST00000137853.1|Zfx|ENSMUSG00000079509.4|zinc finger protein X-linked 	ENSMUST00000088102.5|Zfx|ENSMUSG00000079509.4|zinc finger protein X-linked 	ENSMUST00000113927.1|Zfx|ENSMUSG00000079509.4|zinc finger protein X-linked
mm10_v2_chr2_+_122028544_122028563	0.565952	UGUGCUU	ENSMUST00000028668.7|Eif3j1|ENSMUSG00000027236.8|eukaryotic translation initiation factor 3, subunit J1
mm10_v2_chr9_+_45138437_45138462	0.542723	UGUGCUU	ENSMUST00000060125.5|Scn4b|ENSMUSG00000046480.5|sodium channel, type IV, beta
mm10_v2_chr16_-_74411292_74411430	0.539823	UGUGCUU	ENSMUST00000117200.1|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chrX_+_159255782_159255899	0.53922	UGUGCUU	ENSMUST00000126686.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3 	ENSMUST00000033671.6|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chr6_-_57825144_57825166	0.5347	UGUGCUU	ENSMUST00000114297.2|Vopp1|ENSMUSG00000037788.8|vesicular, overexpressed in cancer, prosurvival protein 1
mm10_v2_chr5_+_32458974_32459110	0.530866	UGUGCUU	ENSMUST00000015100.8|Ppp1cb|ENSMUSG00000014956.9|protein phosphatase 1, catalytic subunit, beta isoform
mm10_v2_chr15_-_96460838_96460856	0.52933	UGUGCUU	ENSMUST00000047835.6|Scaf11|ENSMUSG00000033228.7|SR-related CTD-associated factor 11
mm10_v2_chr4_+_13743424_13743478	0.525081	UGUGCUU	ENSMUST00000006761.3|Runx1t1|ENSMUSG00000006586.9|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm10_v2_chr16_+_84835070_84835124	0.520498	UGUGCUU	ENSMUST00000009120.7|Gabpa|ENSMUSG00000008976.10|GA repeat binding protein, alpha
mm10_v2_chr2_-_66124994_66125143	0.519945	UGUGCUU	ENSMUST00000028378.3|Galnt3|ENSMUSG00000026994.3|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3
mm10_v2_chr9_-_114564315_114564369	0.513625	UGUGCUU	ENSMUST00000111816.2|Trim71|ENSMUSG00000079259.2|tripartite motif-containing 71
mm10_v2_chr11_+_20543307_20543336	0.513347	UGUGCUU	ENSMUST00000093292.4|Sertad2|ENSMUSG00000049800.7|SERTA domain containing 2
mm10_v2_chr3_+_96181151_96181167	0.512683	UGUGCUU	ENSMUST00000035371.8|Sv2a|ENSMUSG00000038486.8|synaptic vesicle glycoprotein 2 a
mm10_v2_chrX_-_36902877_36902904	0.511666	UGUGCUU	ENSMUST00000057093.6|Nkrf|ENSMUSG00000044149.6|NF-kappaB repressing factor
mm10_v2_chr13_-_101768154_101768217	0.510132	UGUGCUU	ENSMUST00000055518.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr3_-_125938537_125938605	0.50558	UGUGCUU	ENSMUST00000057944.7|Ugt8a|ENSMUSG00000032854.8|UDP galactosyltransferase 8A
mm10_v2_chr11_-_94474088_94474198	0.505108	UGUGCUU	ENSMUST00000107786.1|Cacna1g|ENSMUSG00000020866.11|calcium channel, voltage-dependent, T type, alpha 1G subunit 	ENSMUST00000107791.1|Cacna1g|ENSMUSG00000020866.11|calcium channel, voltage-dependent, T type, alpha 1G subunit 	ENSMUST00000103166.2|Cacna1g|ENSMUSG00000020866.11|calcium channel, voltage-dependent, T type, alpha 1G subunit 	ENSMUST00000107792.1|Cacna1g|ENSMUSG00000020866.11|calcium channel, voltage-dependent, T type, alpha 1G subunit 	ENSMUST00000100561.3|Cacna1g|ENSMUSG00000020866.11|calcium channel, voltage-dependent, T type, alpha 1G subunit 	ENSMUST00000107793.1|Cacna1g|ENSMUSG00000020866.11|calcium channel, voltage-dependent, T type, alpha 1G subunit 	ENSMUST00000107788.1|Cacna1g|ENSMUSG00000020866.11|calcium channel, voltage-dependent, T type, alpha 1G subunit 	ENSMUST00000107790.1|Cacna1g|ENSMUSG00000020866.11|calcium channel, voltage-dependent, T type, alpha 1G subunit 	ENSMUST00000107789.1|Cacna1g|ENSMUSG00000020866.11|calcium channel, voltage-dependent, T type, alpha 1G subunit 	ENSMUST00000107785.1|Cacna1g|ENSMUSG00000020866.11|calcium channel, voltage-dependent, T type, alpha 1G subunit 	ENSMUST00000021234.8|Cacna1g|ENSMUSG00000020866.11|calcium channel, voltage-dependent, T type, alpha 1G subunit
mm10_v2_chr10_-_105574435_105574451	0.498101	UGUGCUU	ENSMUST00000061506.8|Tmtc2|ENSMUSG00000036019.8|transmembrane and tetratricopeptide repeat containing 2
mm10_v2_chr5_-_18360384_18360473	0.494785	UGUGCUU	ENSMUST00000074694.5|Gnai1|ENSMUSG00000057614.5|guanine nucleotide binding protein (G protein), alpha inhibiting 1
mm10_v2_chr13_+_75707484_75707510	0.492799	UGUGCUU	ENSMUST00000001583.6|Ell2|ENSMUSG00000001542.6|elongation factor RNA polymerase II 2
mm10_v2_chr15_-_103239812_103239888	0.489761	UGUGCUU	ENSMUST00000118152.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr8_-_90348343_90348386	0.488618	UGUGCUU	ENSMUST00000109621.3|Tox3|ENSMUSG00000043668.7|TOX high mobility group box family member 3
mm10_v2_chr6_+_52713729_52713800	0.482406	UGUGCUU	ENSMUST00000080723.4|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1 	ENSMUST00000149588.1|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1
mm10_v2_chr2_-_32083783_32083796	0.477063	UGUGCUU	ENSMUST00000056406.6|Fam78a|ENSMUSG00000050592.8|family with sequence similarity 78, member A
mm10_v2_chr12_-_32061221_32061301	0.473627	UGUGCUU	ENSMUST00000003079.5|Prkar2b|ENSMUSG00000002997.9|protein kinase, cAMP dependent regulatory, type II beta 	ENSMUST00000036497.9|Prkar2b|ENSMUSG00000002997.9|protein kinase, cAMP dependent regulatory, type II beta
mm10_v2_chr8_+_84701430_84701497	0.472189	UGUGCUU	ENSMUST00000037165.4|Lyl1|ENSMUSG00000034041.4|lymphoblastomic leukemia 1
mm10_v2_chr1_-_30949756_30949770	0.469621	UGUGCUU	ENSMUST00000076587.3|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1 	ENSMUST00000027232.7|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1
mm10_v2_chr5_-_149053038_149053053	0.469493	UGUGCUU	ENSMUST00000085546.6|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr1_-_80340480_80340512	0.461404	UGUGCUU	ENSMUST00000163119.1|Cul3|ENSMUSG00000004364.8|cullin 3
mm10_v2_chr2_-_163918683_163918683	0.461036	UGUGCUU	ENSMUST00000044734.2|Rims4|ENSMUSG00000035226.5|regulating synaptic membrane exocytosis 4
mm10_v2_chr14_+_67716095_67716151	0.457379	UGUGCUU	ENSMUST00000078053.6|Kctd9|ENSMUSG00000034327.11|potassium channel tetramerisation domain containing 9 	ENSMUST00000145542.1|Kctd9|ENSMUSG00000034327.11|potassium channel tetramerisation domain containing 9 	ENSMUST00000125212.1|Kctd9|ENSMUSG00000034327.11|potassium channel tetramerisation domain containing 9
mm10_v2_chr13_+_111686178_111686210	0.453642	UGUGCUU	ENSMUST00000109272.2|Mier3|ENSMUSG00000032727.7|mesoderm induction early response 1, family member 3
mm10_v2_chr11_+_44617310_44617336	0.45243	UGUGCUU	ENSMUST00000081265.5|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000101326.3|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000109268.1|Ebf1|ENSMUSG00000057098.8|early B cell factor 1
mm10_v2_chr6_-_118197732_118197744	0.447547	UGUGCUU	ENSMUST00000032201.5|Ret|ENSMUSG00000030110.7|ret proto-oncogene 	ENSMUST00000088790.3|Ret|ENSMUSG00000030110.7|ret proto-oncogene
mm10_v2_chr5_+_108065742_108065767	0.445168	UGUGCUU	ENSMUST00000081567.4|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000170319.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000112626.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2
mm10_v2_chr3_+_138742195_138742322	0.442423	UGUGCUU	ENSMUST00000029800.2|Tspan5|ENSMUSG00000028152.4|tetraspanin 5
mm10_v2_chr9_+_22099271_22099287	0.436893	UGUGCUU	ENSMUST00000001384.4|Cnn1|ENSMUSG00000001349.4|calponin 1
mm10_v2_chrX_+_23693043_23693131	0.431426	UGUGCUU	ENSMUST00000035766.6|Wdr44|ENSMUSG00000036769.8|WD repeat domain 44 	ENSMUST00000101670.2|Wdr44|ENSMUSG00000036769.8|WD repeat domain 44
mm10_v2_chr10_+_89744988_89745022	0.430936	UGUGCUU	ENSMUST00000020112.5|Uhrf1bp1l|ENSMUSG00000019951.9|UHRF1 (ICBP90) binding protein 1-like
mm10_v2_chr1_+_136131382_136131404	0.425886	UGUGCUU	ENSMUST00000075164.4|Kif21b|ENSMUSG00000041642.12|kinesin family member 21B
mm10_v2_chr10_+_3740348_3740430	0.423482	UGUGCUU	ENSMUST00000120274.1|Plekhg1|ENSMUSG00000040624.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
mm10_v2_chr3_-_107518001_107518023	0.418761	UGUGCUU	ENSMUST00000169449.1|Slc6a17|ENSMUSG00000027894.8|solute carrier family 6 (neurotransmitter transporter), member 17 	ENSMUST00000029499.8|Slc6a17|ENSMUSG00000027894.8|solute carrier family 6 (neurotransmitter transporter), member 17
mm10_v2_chr11_-_85139939_85140038	0.415674	UGUGCUU	ENSMUST00000108075.2|Usp32|ENSMUSG00000000804.8|ubiquitin specific peptidase 32
mm10_v2_chr18_-_43477764_43477836	0.410631	UGUGCUU	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chr6_-_13677930_13677974	0.409895	UGUGCUU	ENSMUST00000045235.5|B630005N14Rik|ENSMUSG00000042742.5|RIKEN cDNA B630005N14 gene
mm10_v2_chr2_+_31950257_31950281	0.409571	UGUGCUU	ENSMUST00000001920.7|Aif1l|ENSMUSG00000001864.7|allograft inflammatory factor 1-like
mm10_v2_chr6_+_100833606_100833663	0.40941	UGUGCUU	ENSMUST00000063854.4|Ppp4r2|ENSMUSG00000052144.6|protein phosphatase 4, regulatory subunit 2
mm10_v2_chr19_+_59260878_59260901	0.409063	UGUGCUU	ENSMUST00000026084.3|Slc18a2|ENSMUSG00000025094.7|solute carrier family 18 (vesicular monoamine), member 2
mm10_v2_chr3_+_28781305_28781344	0.406329	UGUGCUU	ENSMUST00000060500.7|Eif5a2|ENSMUSG00000050192.7|eukaryotic translation initiation factor 5A2
mm10_v2_chr2_+_74704861_74704914	0.400598	UGUGCUU	ENSMUST00000019749.3|Hoxd8|ENSMUSG00000027102.4|homeobox D8
mm10_v2_chr17_+_86963077_86963094	0.395735	UGUGCUU	ENSMUST00000024956.8|Rhoq|ENSMUSG00000024143.8|ras homolog gene family, member Q
mm10_v2_chr9_-_56161051_56161075	0.394539	UGUGCUU	ENSMUST00000034876.8|Tspan3|ENSMUSG00000032324.10|tetraspanin 3
mm10_v2_chr3_+_31095052_31095125	0.392235	UGUGCUU	ENSMUST00000118470.1|Skil|ENSMUSG00000027660.10|SKI-like 	ENSMUST00000029194.5|Skil|ENSMUSG00000027660.10|SKI-like 	ENSMUST00000123532.1|Skil|ENSMUSG00000027660.10|SKI-like 	ENSMUST00000117728.1|Skil|ENSMUSG00000027660.10|SKI-like
mm10_v2_chrX_+_71962971_71963013	0.390474	UGUGCUU	ENSMUST00000048790.6|Prrg3|ENSMUSG00000033361.7|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
mm10_v2_chr2_+_49787675_49787695	0.382408	UGUGCUU	ENSMUST00000028103.6|Lypd6b|ENSMUSG00000026765.6|LY6/PLAUR domain containing 6B
mm10_v2_chr2_-_140671462_140671476	0.380955	UGUGCUU	ENSMUST00000110057.2|Flrt3|ENSMUSG00000051379.6|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr6_-_12749193_12749253	0.379844	UGUGCUU	ENSMUST00000046121.6|Thsd7a|ENSMUSG00000032625.8|thrombospondin, type I, domain containing 7A 	ENSMUST00000172356.1|Thsd7a|ENSMUSG00000032625.8|thrombospondin, type I, domain containing 7A
mm10_v2_chr7_+_135537814_135537830	0.376153	UGUGCUU	ENSMUST00000073961.6|Ptpre|ENSMUSG00000041836.9|protein tyrosine phosphatase, receptor type, E
mm10_v2_chr16_+_58408443_58408523	0.374694	UGUGCUU	ENSMUST00000046663.7|Dcbld2|ENSMUSG00000035107.7|discoidin, CUB and LCCL domain containing 2
mm10_v2_chr1_-_192855723_192855752	0.373894	UGUGCUU	ENSMUST00000155579.1|Sertad4|ENSMUSG00000016262.8|SERTA domain containing 4
mm10_v2_chr5_+_33995984_33996030	0.373894	UGUGCUU	ENSMUST00000056355.8|Nat8l|ENSMUSG00000048142.8|N-acetyltransferase 8-like
mm10_v2_chr2_-_126499839_126499858	0.371759	UGUGCUU	ENSMUST00000040128.5|Atp8b4|ENSMUSG00000060131.5|ATPase, class I, type 8B, member 4
mm10_v2_chr13_+_9093893_9093927	0.37075	UGUGCUU	ENSMUST00000091829.2|Larp4b|ENSMUSG00000033499.7|La ribonucleoprotein domain family, member 4B
mm10_v2_chr14_+_120275669_120275714	0.370682	UGUGCUU	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chr2_+_3284202_3284220	0.367011	UGUGCUU	ENSMUST00000081932.6|Nmt2|ENSMUSG00000026643.10|N-myristoyltransferase 2
mm10_v2_chr3_-_9833653_9833679	0.36524	UGUGCUU	ENSMUST00000161949.1|Pag1|ENSMUSG00000027508.9|phosphoprotein associated with glycosphingolipid microdomains 1
mm10_v2_chr4_-_136956784_136956871	0.363285	UGUGCUU	ENSMUST00000030420.8|Epha8|ENSMUSG00000028661.8|Eph receptor A8
mm10_v2_chr1_-_54926311_54926402	0.359491	UGUGCUU	ENSMUST00000179030.1|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44 	ENSMUST00000044359.9|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44
mm10_v2_chr5_+_47984793_47984811	0.359028	UGUGCUU	ENSMUST00000170109.2|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila) 	ENSMUST00000174421.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila) 	ENSMUST00000173702.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila) 	ENSMUST00000173107.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila)
mm10_v2_chr7_+_109010825_109010930	0.358683	UGUGCUU	ENSMUST00000033341.5|Tub|ENSMUSG00000031028.7|tubby candidate gene
mm10_v2_chr8_-_70120816_70120873	0.357651	UGUGCUU	ENSMUST00000002412.8|Ncan|ENSMUSG00000002341.8|neurocan
mm10_v2_chr2_+_117121374_117121374	0.354008	UGUGCUU	ENSMUST00000028829.6|Spred1|ENSMUSG00000027351.8|sprouty protein with EVH-1 domain 1, related sequence
mm10_v2_chr16_-_21694570_21694665	0.351117	UGUGCUU	ENSMUST00000053336.7|2510009E07Rik|ENSMUSG00000043391.9|RIKEN cDNA 2510009E07 gene
mm10_v2_chr17_+_47630690_47630690	0.349902	UGUGCUU	ENSMUST00000024779.8|Usp49|ENSMUSG00000090115.1|ubiquitin specific peptidase 49
mm10_v2_chr4_+_42916647_42916712	0.343952	UGUGCUU	ENSMUST00000132173.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178 	ENSMUST00000107975.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178
mm10_v2_chr3_-_56183678_56183701	0.341461	UGUGCUU	ENSMUST00000029374.6|Nbea|ENSMUSG00000027799.8|neurobeachin
mm10_v2_chr6_-_145048809_145048821	0.340255	UGUGCUU	ENSMUST00000032402.5|Bcat1|ENSMUSG00000030268.11|branched chain aminotransferase 1, cytosolic
mm10_v2_chr8_-_8660773_8660773	0.338571	UGUGCUU	ENSMUST00000001319.7|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr19_+_44757394_44757394	0.33832	UGUGCUU	ENSMUST00000004340.4|Pax2|ENSMUSG00000004231.9|paired box gene 2
mm10_v2_chr11_-_100472725_100472759	0.337652	UGUGCUU	ENSMUST00000056665.3|Klhl11|ENSMUSG00000048732.5|kelch-like 11
mm10_v2_chr2_+_156420837_156420909	0.336433	UGUGCUU	ENSMUST00000103137.3|Epb4.1l1|ENSMUSG00000027624.11|erythrocyte protein band 4.1-like 1
mm10_v2_chr7_-_116443439_116443462	0.332872	UGUGCUU	ENSMUST00000170430.1|Pik3c2a|ENSMUSG00000030660.8|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm10_v2_chr4_-_44167580_44167608	0.332305	UGUGCUU	ENSMUST00000098098.2|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr5_-_89883321_89883343	0.330105	UGUGCUU	ENSMUST00000163159.1|Adamts3|ENSMUSG00000043635.6|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 	ENSMUST00000061427.5|Adamts3|ENSMUSG00000043635.6|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
mm10_v2_chr11_-_6475992_6476102	0.329834	UGUGCUU	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr12_-_5375682_5375705	0.328688	UGUGCUU	ENSMUST00000020958.8|Klhl29|ENSMUSG00000020627.9|kelch-like 29
mm10_v2_chr3_+_99253754_99253807	0.325992	UGUGCUU	ENSMUST00000029462.5|Tbx15|ENSMUSG00000027868.5|T-box 15
mm10_v2_chr7_+_59228743_59228769	0.32505	UGUGCUU	ENSMUST00000107537.1|Ube3a|ENSMUSG00000025326.8|ubiquitin protein ligase E3A
mm10_v2_chr2_+_4400958_4400975	0.323374	UGUGCUU	ENSMUST00000075767.7|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr16_+_72663143_72663189	0.322156	UGUGCUU	ENSMUST00000023600.7|Robo1|ENSMUSG00000022883.10|roundabout homolog 1 (Drosophila)
mm10_v2_chr19_-_50678642_50678702	0.322116	UGUGCUU	ENSMUST00000072685.6|Sorcs1|ENSMUSG00000043531.9|VPS10 domain receptor protein SORCS 1 	ENSMUST00000164039.2|Sorcs1|ENSMUSG00000043531.9|VPS10 domain receptor protein SORCS 1
mm10_v2_chr3_+_51415986_51416044	0.321494	UGUGCUU	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr12_+_8674129_8674150	0.32063	UGUGCUU	ENSMUST00000111123.2|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000178015.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000020915.3|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila)
mm10_v2_chr17_-_71475285_71475343	0.319941	UGUGCUU	ENSMUST00000127430.1|Smchd1|ENSMUSG00000024054.7|SMC hinge domain containing 1
mm10_v2_chr2_-_34755229_34755252	0.319863	UGUGCUU	ENSMUST00000102800.1|Gapvd1|ENSMUSG00000026867.12|GTPase activating protein and VPS9 domains 1
mm10_v2_chr2_+_16356294_16356316	0.317748	UGUGCUU	ENSMUST00000028081.6|Plxdc2|ENSMUSG00000026748.7|plexin domain containing 2
mm10_v2_chr10_+_56377300_56377338	0.313114	UGUGCUU	ENSMUST00000068581.7|Gja1|ENSMUSG00000050953.9|gap junction protein, alpha 1
mm10_v2_chr8_-_25201349_25201459	0.309494	UGUGCUU	ENSMUST00000084512.4|Tacc1|ENSMUSG00000065954.4|transforming, acidic coiled-coil containing protein 1 	ENSMUST00000084030.4|Tacc1|ENSMUSG00000065954.4|transforming, acidic coiled-coil containing protein 1
mm10_v2_chrX_+_13071500_13071576	0.309073	UGUGCUU	ENSMUST00000089302.4|Usp9x|ENSMUSG00000031010.11|ubiquitin specific peptidase 9, X chromosome
mm10_v2_chr19_-_31765027_31765079	0.308735	UGUGCUU	ENSMUST00000065067.6|Prkg1|ENSMUSG00000052920.8|protein kinase, cGMP-dependent, type I
mm10_v2_chr5_+_26904682_26904710	0.300203	UGUGCUU	ENSMUST00000120555.1|Dpp6|ENSMUSG00000061576.9|dipeptidylpeptidase 6
mm10_v2_chr8_-_105827190_105827350	0.299981	UGUGCUU	ENSMUST00000041400.5|Ranbp10|ENSMUSG00000037415.5|RAN binding protein 10
mm10_v2_chr14_+_119138415_119138415	0.290202	UGUGCUU	ENSMUST00000065904.3|Hs6st3|ENSMUSG00000053465.5|heparan sulfate 6-O-sulfotransferase 3
mm10_v2_chr12_+_95692212_95692246	0.288684	UGUGCUU	ENSMUST00000057324.3|Flrt2|ENSMUSG00000047414.6|fibronectin leucine rich transmembrane protein 2
mm10_v2_chr4_+_135120640_135120660	0.288675	UGUGCUU	ENSMUST00000056977.7|Runx3|ENSMUSG00000070691.4|runt related transcription factor 3
mm10_v2_chr2_+_106693185_106693278	0.288024	UGUGCUU	ENSMUST00000111063.1|Mpped2|ENSMUSG00000016386.9|metallophosphoesterase domain containing 2
mm10_v2_chr2_-_125723387_125723537	0.285449	UGUGCUU	ENSMUST00000042246.7|Shc4|ENSMUSG00000035109.8|SHC (Src homology 2 domain containing) family, member 4
mm10_v2_chr8_+_95703037_95703063	0.285258	UGUGCUU	ENSMUST00000073139.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4 	ENSMUST00000080666.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4
mm10_v2_chr6_+_142387215_142387269	0.280783	UGUGCUU	ENSMUST00000032372.6|Golt1b|ENSMUSG00000030245.10|golgi transport 1 homolog B (S. cerevisiae)
mm10_v2_chr9_-_104262900_104262949	0.279705	UGUGCUU	ENSMUST00000035170.6|Dnajc13|ENSMUSG00000032560.7|DnaJ (Hsp40) homolog, subfamily C, member 13
mm10_v2_chr8_+_10272572_10272572	0.275968	UGUGCUU	ENSMUST00000042103.8|Myo16|ENSMUSG00000039057.9|myosin XVI
mm10_v2_chr4_+_21776261_21776297	0.272834	UGUGCUU	ENSMUST00000065111.8|Usp45|ENSMUSG00000040455.11|ubiquitin specific petidase 45 	ENSMUST00000040429.5|Usp45|ENSMUSG00000040455.11|ubiquitin specific petidase 45 	ENSMUST00000148304.1|Usp45|ENSMUSG00000040455.11|ubiquitin specific petidase 45
mm10_v2_chrX_+_139684980_139685082	0.271983	UGUGCUU	ENSMUST00000096313.3|Tbc1d8b|ENSMUSG00000042473.8|TBC1 domain family, member 8B
mm10_v2_chr11_-_20831009_20831056	0.271752	UGUGCUU	ENSMUST00000047028.8|Lgalsl|ENSMUSG00000042363.8|lectin, galactoside binding-like
mm10_v2_chr10_+_70097102_70097211	0.270073	UGUGCUU	ENSMUST00000147545.1|Ccdc6|ENSMUSG00000048701.7|coiled-coil domain containing 6
mm10_v2_chr8_+_66697404_66697428	0.26968	UGUGCUU	ENSMUST00000039303.5|Npy1r|ENSMUSG00000036437.5|neuropeptide Y receptor Y1
mm10_v2_chr5_-_113015473_113015567	0.26813	UGUGCUU	ENSMUST00000065167.4|Adrbk2|ENSMUSG00000042249.7|adrenergic receptor kinase, beta 2
mm10_v2_chr7_-_118995211_118995219	0.266358	UGUGCUU	ENSMUST00000008878.8|Gprc5b|ENSMUSG00000008734.8|G protein-coupled receptor, family C, group 5, member B
mm10_v2_chrX_-_41911877_41911912	0.265826	UGUGCUU	ENSMUST00000047037.8|Thoc2|ENSMUSG00000037475.9|THO complex 2
mm10_v2_chr1_+_139422196_139422383	0.264806	UGUGCUU	ENSMUST00000039867.7|Zbtb41|ENSMUSG00000033964.7|zinc finger and BTB domain containing 41 homolog
mm10_v2_chr18_-_79109391_79109510	0.264371	UGUGCUU	ENSMUST00000025430.8|Setbp1|ENSMUSG00000024548.9|SET binding protein 1 	ENSMUST00000161465.2|Setbp1|ENSMUSG00000024548.9|SET binding protein 1
mm10_v2_chr9_+_44604844_44604921	0.26392	UGUGCUU	ENSMUST00000170489.1|Ddx6|ENSMUSG00000032097.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm10_v2_chr1_-_181211437_181211552	0.263326	UGUGCUU	ENSMUST00000162963.1|Wdr26|ENSMUSG00000038733.7|WD repeat domain 26 	ENSMUST00000162819.1|Wdr26|ENSMUSG00000038733.7|WD repeat domain 26
mm10_v2_chr7_+_91090697_91090727	0.261611	UGUGCUU	ENSMUST00000107196.2|Dlg2|ENSMUSG00000052572.9|discs, large homolog 2 (Drosophila)
mm10_v2_chr14_-_67072465_67072476	0.260316	UGUGCUU	ENSMUST00000089230.5|Ppp2r2a|ENSMUSG00000022052.8|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform
mm10_v2_chr16_-_64786321_64786321	0.253762	UGUGCUU	ENSMUST00000052588.4|Zfp654|ENSMUSG00000047141.4|zinc finger protein 654
mm10_v2_chr10_+_80264942_80265033	0.253652	UGUGCUU	ENSMUST00000105362.1|Dazap1|ENSMUSG00000069565.6|DAZ associated protein 1 	ENSMUST00000105361.3|Dazap1|ENSMUSG00000069565.6|DAZ associated protein 1
mm10_v2_chr8_+_40511769_40511787	0.252542	UGUGCUU	ENSMUST00000098817.2|Vps37a|ENSMUSG00000031600.10|vacuolar protein sorting 37A (yeast)
mm10_v2_chr18_-_58209926_58210067	0.252409	UGUGCUU	ENSMUST00000025497.6|Fbn2|ENSMUSG00000024598.8|fibrillin 2
mm10_v2_chr7_+_99535439_99535498	0.251905	UGUGCUU	ENSMUST00000098266.2|Arrb1|ENSMUSG00000018909.9|arrestin, beta 1 	ENSMUST00000179755.1|Arrb1|ENSMUSG00000018909.9|arrestin, beta 1
mm10_v2_chr2_+_71211706_71211794	0.251835	UGUGCUU	ENSMUST00000112142.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112139.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112140.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112138.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2
mm10_v2_chr4_+_137707458_137707527	0.251588	UGUGCUU	ENSMUST00000097837.4|Rap1gap|ENSMUSG00000041351.10|Rap1 GTPase-activating protein
mm10_v2_chr12_+_71831064_71831178	0.25145	UGUGCUU	ENSMUST00000085299.2|Daam1|ENSMUSG00000034574.9|dishevelled associated activator of morphogenesis 1
mm10_v2_chr18_+_56707725_56707940	0.250702	UGUGCUU	ENSMUST00000025486.8|Lmnb1|ENSMUSG00000024590.8|lamin B1
mm10_v2_chr8_+_83900096_83900110	0.247638	UGUGCUU	ENSMUST00000141158.1|Lphn1|ENSMUSG00000013033.10|latrophilin 1
mm10_v2_chr3_+_75557530_75557561	0.24712	UGUGCUU	ENSMUST00000161776.1|Serpini1|ENSMUSG00000027834.9|serine (or cysteine) peptidase inhibitor, clade I, member 1 	ENSMUST00000029423.8|Serpini1|ENSMUSG00000027834.9|serine (or cysteine) peptidase inhibitor, clade I, member 1
mm10_v2_chrX_-_53370470_53370502	0.246951	UGUGCUU	ENSMUST00000096447.2|Mospd1|ENSMUSG00000023074.5|motile sperm domain containing 1 	ENSMUST00000023836.3|Mospd1|ENSMUSG00000023074.5|motile sperm domain containing 1
mm10_v2_chr11_-_63922257_63922292	0.246837	UGUGCUU	ENSMUST00000094103.3|Hs3st3b1|ENSMUSG00000070407.5|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
mm10_v2_chr4_-_132345715_132345747	0.246421	UGUGCUU	ENSMUST00000084250.4|Rcc1|ENSMUSG00000028896.7|regulator of chromosome condensation 1
mm10_v2_chr2_+_74691090_74691090	0.246347	UGUGCUU	ENSMUST00000061745.3|Hoxd10|ENSMUSG00000050368.3|homeobox D10
mm10_v2_chr2_-_33887862_33887946	0.243656	UGUGCUU	ENSMUST00000041555.3|Mvb12b|ENSMUSG00000038740.3|multivesicular body subunit 12B
mm10_v2_chr12_+_117843489_117843515	0.243137	UGUGCUU	ENSMUST00000021592.9|Cdca7l|ENSMUSG00000021175.9|cell division cycle associated 7 like
mm10_v2_chr7_+_27258725_27258815	0.242616	UGUGCUU	ENSMUST00000079258.6|Numbl|ENSMUSG00000063160.6|numb-like
mm10_v2_chr1_+_60181495_60181591	0.242297	UGUGCUU	ENSMUST00000160834.1|Nbeal1|ENSMUSG00000073664.5|neurobeachin like 1
mm10_v2_chr13_-_51567084_51567084	0.239822	UGUGCUU	ENSMUST00000021898.5|Shc3|ENSMUSG00000021448.6|src homology 2 domain-containing transforming protein C3
mm10_v2_chr6_-_100287441_100287465	0.2385	UGUGCUU	ENSMUST00000101118.2|Rybp|ENSMUSG00000072872.2|RING1 and YY1 binding protein
mm10_v2_chr11_+_29373618_29373777	0.237603	UGUGCUU	ENSMUST00000040182.6|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A 	ENSMUST00000109477.1|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A
mm10_v2_chr12_+_102129019_102129174	0.234861	UGUGCUU	ENSMUST00000079020.4|Slc24a4|ENSMUSG00000041771.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
mm10_v2_chr10_-_14544972_14545036	0.234786	UGUGCUU	ENSMUST00000041168.4|Gpr126|ENSMUSG00000039116.4|G protein-coupled receptor 126
mm10_v2_chr1_+_89454769_89454885	0.232552	UGUGCUU	ENSMUST00000027521.8|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 	ENSMUST00000074945.5|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm10_v2_chr12_-_27342696_27342726	0.231987	UGUGCUU	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr16_+_17233560_17233664	0.231774	UGUGCUU	ENSMUST00000090190.5|Hic2|ENSMUSG00000050240.8|hypermethylated in cancer 2 	ENSMUST00000115698.2|Hic2|ENSMUSG00000050240.8|hypermethylated in cancer 2
mm10_v2_chr18_+_69345721_69345811	0.231316	UGUGCUU	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr13_+_14063776_14063822	0.229969	UGUGCUU	ENSMUST00000129488.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110536.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110534.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000039538.8|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110533.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like)
mm10_v2_chr16_+_11984581_11984581	0.228391	UGUGCUU	ENSMUST00000170672.2|Shisa9|ENSMUSG00000022494.7|shisa homolog 9 (Xenopus laevis) 	ENSMUST00000023138.7|Shisa9|ENSMUSG00000022494.7|shisa homolog 9 (Xenopus laevis)
mm10_v2_chr7_-_132599637_132599637	0.228311	UGUGCUU	ENSMUST00000054562.3|Nkx1-2|ENSMUSG00000048528.7|NK1 transcription factor related, locus 2 (Drosophila)
mm10_v2_chr3_+_98382438_98382520	0.228279	UGUGCUU	ENSMUST00000056096.8|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chrX_+_140664908_140665072	0.225674	UGUGCUU	ENSMUST00000112990.1|Mid2|ENSMUSG00000000266.5|midline 2 	ENSMUST00000112988.1|Mid2|ENSMUSG00000000266.5|midline 2
mm10_v2_chr2_-_73529725_73529736	0.225002	UGUGCUU	ENSMUST00000094681.4|Wipf1|ENSMUSG00000075284.4|WAS/WASL interacting protein family, member 1
mm10_v2_chr11_-_104442232_104442291	0.224601	UGUGCUU	ENSMUST00000106977.1|Kansl1|ENSMUSG00000018412.10|KAT8 regulatory NSL complex subunit 1 	ENSMUST00000106972.1|Kansl1|ENSMUSG00000018412.10|KAT8 regulatory NSL complex subunit 1
mm10_v2_chr9_-_72111827_72111895	0.220649	UGUGCUU	ENSMUST00000183404.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184783.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr2_+_10372426_10372497	0.218444	UGUGCUU	ENSMUST00000114864.2|Sfmbt2|ENSMUSG00000061186.9|Scm-like with four mbt domains 2 	ENSMUST00000116594.2|Sfmbt2|ENSMUSG00000061186.9|Scm-like with four mbt domains 2 	ENSMUST00000041105.6|Sfmbt2|ENSMUSG00000061186.9|Scm-like with four mbt domains 2
mm10_v2_chr18_-_63387124_63387189	0.218383	UGUGCUU	ENSMUST00000047480.6|Piezo2|ENSMUSG00000041482.10|piezo-type mechanosensitive ion channel component 2 	ENSMUST00000046860.5|Piezo2|ENSMUSG00000041482.10|piezo-type mechanosensitive ion channel component 2
mm10_v2_chrX_-_113185485_113185522	0.217067	UGUGCUU	ENSMUST00000026607.8|Chm|ENSMUSG00000025531.8|choroidermia 	ENSMUST00000113388.2|Chm|ENSMUSG00000025531.8|choroidermia
mm10_v2_chr11_-_106788486_106788532	0.216564	UGUGCUU	ENSMUST00000021062.5|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr6_+_120364094_120364163	0.216459	UGUGCUU	ENSMUST00000100996.3|Kdm5a|ENSMUSG00000030180.9|lysine (K)-specific demethylase 5A 	ENSMUST00000005108.7|Kdm5a|ENSMUSG00000030180.9|lysine (K)-specific demethylase 5A
mm10_v2_chr18_+_57878620_57878678	0.216434	UGUGCUU	ENSMUST00000115366.2|Slc12a2|ENSMUSG00000024597.10|solute carrier family 12, member 2
mm10_v2_chr12_+_70453095_70453107	0.215609	UGUGCUU	ENSMUST00000021471.6|Tmx1|ENSMUSG00000021072.6|thioredoxin-related transmembrane protein 1
mm10_v2_chr3_+_60501252_60501275	0.214226	UGUGCUU	ENSMUST00000099087.2|Mbnl1|ENSMUSG00000027763.8|muscleblind-like 1 (Drosophila)
mm10_v2_chr3_+_41555723_41555745	0.213696	UGUGCUU	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr14_-_18239053_18239127	0.209016	UGUGCUU	ENSMUST00000090543.5|Nr1d2|ENSMUSG00000021775.10|nuclear receptor subfamily 1, group D, member 2
mm10_v2_chr6_-_30304513_30304570	0.207525	UGUGCUU	ENSMUST00000094543.2|Ube2h|ENSMUSG00000039159.10|ubiquitin-conjugating enzyme E2H 	ENSMUST00000102993.3|Ube2h|ENSMUSG00000039159.10|ubiquitin-conjugating enzyme E2H
mm10_v2_chr2_-_127521358_127521375	0.206357	UGUGCUU	ENSMUST00000028850.8|Kcnip3|ENSMUSG00000079056.6|Kv channel interacting protein 3, calsenilin 	ENSMUST00000103215.4|Kcnip3|ENSMUSG00000079056.6|Kv channel interacting protein 3, calsenilin
mm10_v2_chr8_+_54954728_54954820	0.20558	UGUGCUU	ENSMUST00000033915.7|Gpm6a|ENSMUSG00000031517.7|glycoprotein m6a
mm10_v2_chr7_-_100121512_100121565	0.203437	UGUGCUU	ENSMUST00000032969.7|Pold3|ENSMUSG00000030726.9|polymerase (DNA-directed), delta 3, accessory subunit
mm10_v2_chr4_-_11007635_11007676	0.200381	UGUGCUU	ENSMUST00000054776.3|Plekhf2|ENSMUSG00000049969.3|pleckstrin homology domain containing, family F (with FYVE domain) member 2
mm10_v2_chr13_-_103764502_103764505	0.198525	UGUGCUU	ENSMUST00000074616.5|Srek1|ENSMUSG00000032621.7|splicing regulatory glutamine/lysine-rich protein 1
mm10_v2_chr5_+_117133567_117133649	0.198268	UGUGCUU	ENSMUST00000179276.1|Taok3|ENSMUSG00000061288.7|TAO kinase 3 	ENSMUST00000092889.5|Taok3|ENSMUSG00000061288.7|TAO kinase 3 	ENSMUST00000145640.1|Taok3|ENSMUSG00000061288.7|TAO kinase 3
mm10_v2_chr5_-_22550279_22550386	0.196942	UGUGCUU	ENSMUST00000030872.5|Orc5|ENSMUSG00000029012.5|origin recognition complex, subunit 5
mm10_v2_chr7_+_66109474_66109515	0.194632	UGUGCUU	ENSMUST00000036372.6|Chsy1|ENSMUSG00000032640.9|chondroitin sulfate synthase 1
mm10_v2_chr6_+_97807014_97807067	0.194604	UGUGCUU	ENSMUST00000043637.7|Mitf|ENSMUSG00000035158.9|microphthalmia-associated transcription factor
mm10_v2_chr5_-_140649018_140649052	0.193278	UGUGCUU	ENSMUST00000042661.3|Ttyh3|ENSMUSG00000036565.3|tweety homolog 3 (Drosophila)
mm10_v2_chr17_+_64600702_64600739	0.192414	UGUGCUU	ENSMUST00000086723.3|Man2a1|ENSMUSG00000024085.7|mannosidase 2, alpha 1
mm10_v2_chr5_-_20951769_20951824	0.192395	UGUGCUU	ENSMUST00000036489.5|Rsbn1l|ENSMUSG00000039968.5|round spermatid basic protein 1-like
mm10_v2_chrX_+_7822289_7822289	0.188512	UGUGCUU	ENSMUST00000009875.4|Kcnd1|ENSMUSG00000009731.4|potassium voltage-gated channel, Shal-related family, member 1
mm10_v2_chr10_-_81482655_81482725	0.186025	UGUGCUU	ENSMUST00000120508.1|Celf5|ENSMUSG00000034818.10|CUGBP, Elav-like family member 5 	ENSMUST00000118763.1|Celf5|ENSMUSG00000034818.10|CUGBP, Elav-like family member 5
mm10_v2_chr19_+_38836561_38836612	0.185733	UGUGCUU	ENSMUST00000037302.5|Tbc1d12|ENSMUSG00000048720.7|TBC1D12: TBC1 domain family, member 12
mm10_v2_chr7_-_109083284_109083337	0.185298	UGUGCUU	ENSMUST00000120876.1|Ric3|ENSMUSG00000048330.8|resistance to inhibitors of cholinesterase 3 homolog (C. elegans) 	ENSMUST00000055993.6|Ric3|ENSMUSG00000048330.8|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
mm10_v2_chr6_-_52234902_52234960	0.18516	UGUGCUU	ENSMUST00000125581.1|Hoxa10|ENSMUSG00000000938.11|homeobox A10
mm10_v2_chrX_+_52912232_52912361	0.183975	UGUGCUU	ENSMUST00000078944.6|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000101587.3|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000154864.2|Phf6|ENSMUSG00000025626.10|PHD finger protein 6
mm10_v2_chr11_+_94211431_94211454	0.18311	UGUGCUU	ENSMUST00000041589.5|Tob1|ENSMUSG00000037573.5|transducer of ErbB-2.1
mm10_v2_chr3_-_105053125_105053151	0.182423	UGUGCUU	ENSMUST00000077548.5|Cttnbp2nl|ENSMUSG00000062127.5|CTTNBP2 N-terminal like
mm10_v2_chr4_+_95967205_95967320	0.182418	UGUGCUU	ENSMUST00000030306.7|Hook1|ENSMUSG00000028572.7|hook homolog 1 (Drosophila)
mm10_v2_chr13_+_96542727_96542775	0.180802	UGUGCUU	ENSMUST00000077672.4|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 	ENSMUST00000109444.2|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm10_v2_chr5_+_146384947_146384994	0.180324	UGUGCUU	ENSMUST00000110600.1|Wasf3|ENSMUSG00000029636.7|WAS protein family, member 3 	ENSMUST00000016143.7|Wasf3|ENSMUSG00000029636.7|WAS protein family, member 3
mm10_v2_chr11_+_23306884_23306906	0.180109	UGUGCUU	ENSMUST00000180046.1|Usp34|ENSMUSG00000056342.10|ubiquitin specific peptidase 34
mm10_v2_chr1_+_115684727_115684756	0.179864	UGUGCUU	ENSMUST00000043725.7|Cntnap5a|ENSMUSG00000070695.3|contactin associated protein-like 5A
mm10_v2_chr12_-_80260356_80260371	0.179413	UGUGCUU	ENSMUST00000021554.8|Actn1|ENSMUSG00000015143.8|actinin, alpha 1
mm10_v2_chr19_+_53529100_53529109	0.177417	UGUGCUU	ENSMUST00000038287.6|Dusp5|ENSMUSG00000034765.6|dual specificity phosphatase 5
mm10_v2_chr12_-_69198419_69198429	0.176023	UGUGCUU	ENSMUST00000021356.5|Dnaaf2|ENSMUSG00000020973.7|dynein, axonemal assembly factor 2
mm10_v2_chr9_-_119322421_119322449	0.175132	UGUGCUU	ENSMUST00000040853.4|Oxsr1|ENSMUSG00000036737.6|oxidative-stress responsive 1
mm10_v2_chr16_-_3872378_3872411	0.173873	UGUGCUU	ENSMUST00000090522.4|Zfp597|ENSMUSG00000039789.7|zinc finger protein 597
mm10_v2_chr5_-_38561658_38561680	0.173443	UGUGCUU	ENSMUST00000005234.9|Wdr1|ENSMUSG00000005103.9|WD repeat domain 1
mm10_v2_chr19_-_12796108_12796146	0.17252	UGUGCUU	ENSMUST00000038627.8|Zfp91|ENSMUSG00000024695.9|zinc finger protein 91
mm10_v2_chr16_+_33251415_33251456	0.172476	UGUGCUU	ENSMUST00000023502.4|Snx4|ENSMUSG00000022808.4|sorting nexin 4
mm10_v2_chr2_+_152226839_152226908	0.172392	UGUGCUU	ENSMUST00000099224.3|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000124791.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000133119.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide
mm10_v2_chr15_-_90679307_90679432	0.17139	UGUGCUU	ENSMUST00000014777.8|Cpne8|ENSMUSG00000052560.9|copine VIII 	ENSMUST00000064391.5|Cpne8|ENSMUSG00000052560.9|copine VIII
mm10_v2_chr16_+_33062512_33062549	0.171311	UGUGCUU	ENSMUST00000023497.2|Lmln|ENSMUSG00000022802.2|leishmanolysin-like (metallopeptidase M8 family)
mm10_v2_chr1_-_83408190_83408222	0.170637	UGUGCUU	ENSMUST00000160953.1|Sphkap|ENSMUSG00000026163.11|SPHK1 interactor, AKAP domain containing
mm10_v2_chr18_-_47368830_47368878	0.169348	UGUGCUU	ENSMUST00000019791.7|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000115449.2|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr11_+_29172890_29172925	0.168411	UGUGCUU	ENSMUST00000102856.2|Smek2|ENSMUSG00000020463.9|SMEK homolog 2, suppressor of mek1 (Dictyostelium) 	ENSMUST00000020755.5|Smek2|ENSMUSG00000020463.9|SMEK homolog 2, suppressor of mek1 (Dictyostelium)
mm10_v2_chr18_+_34777008_34777075	0.167142	UGUGCUU	ENSMUST00000043775.7|Kdm3b|ENSMUSG00000038773.10|KDM3B lysine (K)-specific demethylase 3B
mm10_v2_chr12_+_35047180_35047230	0.165935	UGUGCUU	ENSMUST00000048519.9|Snx13|ENSMUSG00000020590.9|sorting nexin 13 	ENSMUST00000163677.1|Snx13|ENSMUSG00000020590.9|sorting nexin 13
mm10_v2_chr9_+_101074727_101074727	0.165111	UGUGCUU	ENSMUST00000085177.3|Msl2|ENSMUSG00000066415.3|male-specific lethal 2 homolog (Drosophila)
mm10_v2_chr15_+_6708372_6708396	0.161393	UGUGCUU	ENSMUST00000061656.6|Rictor|ENSMUSG00000050310.8|RPTOR independent companion of MTOR, complex 2
mm10_v2_chr3_+_51483966_51483999	0.160678	UGUGCUU	ENSMUST00000054387.6|Rab33b|ENSMUSG00000027739.8|RAB33B, member of RAS oncogene family
mm10_v2_chr18_-_10181792_10181792	0.15884	UGUGCUU	ENSMUST00000067947.5|Rock1|ENSMUSG00000024290.8|Rho-associated coiled-coil containing protein kinase 1
mm10_v2_chr4_-_94979063_94979106	0.158724	UGUGCUU	ENSMUST00000075872.3|Mysm1|ENSMUSG00000062627.3|myb-like, SWIRM and MPN domains 1
mm10_v2_chr2_+_28447941_28447941	0.158531	UGUGCUU	ENSMUST00000040324.7|Ppp1r26|ENSMUSG00000035829.7|protein phosphatase 1, regulatory subunit 26
mm10_v2_chr13_+_20090538_20090633	0.157702	UGUGCUU	ENSMUST00000072519.5|Elmo1|ENSMUSG00000041112.9|engulfment and cell motility 1
mm10_v2_chr12_-_91590009_91590056	0.155736	UGUGCUU	ENSMUST00000021345.6|Gtf2a1|ENSMUSG00000020962.7|general transcription factor II A, 1
mm10_v2_chr7_-_116038734_116038750	0.154661	UGUGCUU	ENSMUST00000166877.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr5_-_38684743_38684826	0.154425	UGUGCUU	ENSMUST00000057258.4|Zfp518b|ENSMUSG00000046572.4|zinc finger protein 518B 	ENSMUST00000178760.1|Zfp518b|ENSMUSG00000046572.4|zinc finger protein 518B 	ENSMUST00000179555.1|Zfp518b|ENSMUSG00000046572.4|zinc finger protein 518B 	ENSMUST00000180214.1|Zfp518b|ENSMUSG00000046572.4|zinc finger protein 518B
mm10_v2_chr12_+_84451485_84451518	0.153813	UGUGCUU	ENSMUST00000137170.1|Lin52|ENSMUSG00000085793.1|lin-52 homolog (C. elegans)
mm10_v2_chr4_-_3938354_3938401	0.152913	UGUGCUU	ENSMUST00000003369.3|Plag1|ENSMUSG00000003282.3|pleiomorphic adenoma gene 1
mm10_v2_chr7_+_99381495_99381555	0.151548	UGUGCUU	ENSMUST00000037528.8|Gdpd5|ENSMUSG00000035314.8|glycerophosphodiester phosphodiesterase domain containing 5
mm10_v2_chr18_+_35965036_35965087	0.150961	UGUGCUU	ENSMUST00000176873.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2 	ENSMUST00000177432.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr12_-_98901478_98901492	0.148913	UGUGCUU	ENSMUST00000065716.6|Eml5|ENSMUSG00000051166.9|echinoderm microtubule associated protein like 5
mm10_v2_chr5_+_88720855_88720876	0.1485	UGUGCUU	ENSMUST00000113229.1|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B 	ENSMUST00000006424.7|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B
mm10_v2_chr4_+_28813125_28813136	0.147072	UGUGCUU	ENSMUST00000029964.5|Epha7|ENSMUSG00000028289.6|Eph receptor A7 	ENSMUST00000080934.4|Epha7|ENSMUSG00000028289.6|Eph receptor A7
mm10_v2_chr7_+_121392266_121392296	0.146714	UGUGCUU	ENSMUST00000084628.3|Hs3st2|ENSMUSG00000046321.7|heparan sulfate (glucosamine) 3-O-sulfotransferase 2
mm10_v2_chr2_+_15055274_15055379	0.145621	UGUGCUU	ENSMUST00000069870.3|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chr13_-_93499803_93499825	0.145086	UGUGCUU	ENSMUST00000065537.7|Jmy|ENSMUSG00000021690.9|junction-mediating and regulatory protein
mm10_v2_chr9_+_4309719_4309748	0.144991	UGUGCUU	ENSMUST00000049648.7|Kbtbd3|ENSMUSG00000025893.7|kelch repeat and BTB (POZ) domain containing 3
mm10_v2_chr12_-_31634592_31634677	0.143824	UGUGCUU	ENSMUST00000020979.7|Bcap29|ENSMUSG00000020650.8|B cell receptor associated protein 29 	ENSMUST00000177962.1|Bcap29|ENSMUSG00000020650.8|B cell receptor associated protein 29
mm10_v2_chr19_+_41593363_41593363	0.143424	UGUGCUU	ENSMUST00000099454.3|AI606181|ENSMUSG00000074873.3|expressed sequence AI606181
mm10_v2_chr7_+_100607410_100607618	0.140497	UGUGCUU	ENSMUST00000107048.1|Rab6a|ENSMUSG00000030704.8|RAB6A, member RAS oncogene family 	ENSMUST00000032946.3|Rab6a|ENSMUSG00000030704.8|RAB6A, member RAS oncogene family
mm10_v2_chr13_+_31625802_31625816	0.139074	UGUGCUU	ENSMUST00000042054.2|Foxf2|ENSMUSG00000038402.2|forkhead box F2
mm10_v2_chr9_-_89622986_89622986	0.138797	UGUGCUU	ENSMUST00000044491.6|AF529169|ENSMUSG00000039313.8|cDNA sequence AF529169
mm10_v2_chr2_-_39190687_39190746	0.137424	UGUGCUU	ENSMUST00000142872.1|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion 	ENSMUST00000038874.5|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion
mm10_v2_chr9_-_43105718_43105793	0.136983	UGUGCUU	ENSMUST00000165665.1|Arhgef12|ENSMUSG00000059495.7|Rho guanine nucleotide exchange factor (GEF) 12
mm10_v2_chr18_-_25753852_25753983	0.136907	UGUGCUU	ENSMUST00000025117.6|Celf4|ENSMUSG00000024268.9|CUGBP, Elav-like family member 4 	ENSMUST00000115816.2|Celf4|ENSMUSG00000024268.9|CUGBP, Elav-like family member 4
mm10_v2_chr17_+_74528279_74528295	0.136355	UGUGCUU	ENSMUST00000180037.1|Birc6|ENSMUSG00000024073.8|baculoviral IAP repeat-containing 6 	ENSMUST00000024879.6|Birc6|ENSMUSG00000024073.8|baculoviral IAP repeat-containing 6
mm10_v2_chr15_-_28025834_28025879	0.135901	UGUGCUU	ENSMUST00000090247.5|Trio|ENSMUSG00000022263.9|triple functional domain (PTPRF interacting)
mm10_v2_chr12_-_72070991_72071079	0.135867	UGUGCUU	ENSMUST00000050649.4|Gpr135|ENSMUSG00000043398.4|G protein-coupled receptor 135
mm10_v2_chr6_+_45060036_45060067	0.134899	UGUGCUU	ENSMUST00000114641.1|Cntnap2|ENSMUSG00000039419.10|contactin associated protein-like 2
mm10_v2_chr5_+_121220191_121220243	0.13356	UGUGCUU	ENSMUST00000119892.2|Gm15800|ENSMUSG00000042744.10|predicted gene 15800 	ENSMUST00000042614.6|Gm15800|ENSMUSG00000042744.10|predicted gene 15800
mm10_v2_chr13_-_117025505_117025541	0.13137	UGUGCUU	ENSMUST00000022239.6|Parp8|ENSMUSG00000021725.8|poly (ADP-ribose) polymerase family, member 8
mm10_v2_chr17_-_51832666_51832678	0.127924	UGUGCUU	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr3_-_32737147_32737147	0.127522	UGUGCUU	ENSMUST00000043966.7|Mrpl47|ENSMUSG00000037531.7|mitochondrial ribosomal protein L47
mm10_v2_chr9_-_77544870_77544914	0.127035	UGUGCUU	ENSMUST00000183873.1|Lrrc1|ENSMUSG00000032352.9|leucine rich repeat containing 1
mm10_v2_chr10_-_37138863_37138937	0.126775	UGUGCUU	ENSMUST00000092584.5|Marcks|ENSMUSG00000069662.5|myristoylated alanine rich protein kinase C substrate
mm10_v2_chr6_+_119479668_119479795	0.123018	UGUGCUU	ENSMUST00000032094.5|Fbxl14|ENSMUSG00000030019.5|F-box and leucine-rich repeat protein 14
mm10_v2_chrX_+_153237748_153237748	0.121964	UGUGCUU	ENSMUST00000112574.2|Klf8|ENSMUSG00000041649.7|Kruppel-like factor 8
mm10_v2_chr11_+_105178765_105178807	0.120565	UGUGCUU	ENSMUST00000106939.2|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis)
mm10_v2_chr2_-_104816696_104816792	0.117647	UGUGCUU	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr4_+_54947976_54948054	0.117405	UGUGCUU	ENSMUST00000098070.3|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chr16_+_14705832_14705858	0.117072	UGUGCUU	ENSMUST00000023356.6|Snai2|ENSMUSG00000022676.6|snail homolog 2 (Drosophila)
mm10_v2_chr7_-_67372846_67372858	0.115525	UGUGCUU	ENSMUST00000156690.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000107476.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000076325.5|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000032776.8|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000133074.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A
mm10_v2_chr8_-_123515333_123515437	0.115039	UGUGCUU	ENSMUST00000177240.1|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1
mm10_v2_chr5_+_72914264_72914304	0.114532	UGUGCUU	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr17_-_24936969_24937002	0.113484	UGUGCUU	ENSMUST00000178969.1|Mapk8ip3|ENSMUSG00000024163.11|mitogen-activated protein kinase 8 interacting protein 3 	ENSMUST00000115229.3|Mapk8ip3|ENSMUSG00000024163.11|mitogen-activated protein kinase 8 interacting protein 3
mm10_v2_chr13_-_113618549_113618565	0.113237	UGUGCUU	ENSMUST00000109241.3|Snx18|ENSMUSG00000042364.10|sorting nexin 18
mm10_v2_chrX_-_103981242_103981287	0.112312	UGUGCUU	ENSMUST00000121153.1|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting 	ENSMUST00000070705.4|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting
mm10_v2_chr14_-_26669835_26669883	0.111743	UGUGCUU	ENSMUST00000052932.9|Pde12|ENSMUSG00000043702.9|phosphodiesterase 12
mm10_v2_chr19_-_7341792_7341829	0.111252	UGUGCUU	ENSMUST00000164205.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000165286.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000168324.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000032557.8|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr13_-_54766553_54766595	0.10865	UGUGCUU	ENSMUST00000036825.7|Sncb|ENSMUSG00000034891.7|synuclein, beta
mm10_v2_chr10_+_63243785_63243846	0.108614	UGUGCUU	ENSMUST00000020258.8|Herc4|ENSMUSG00000020064.8|hect domain and RLD 4
mm10_v2_chr12_+_3365108_3365142	0.107955	UGUGCUU	ENSMUST00000020999.5|Kif3c|ENSMUSG00000020668.9|kinesin family member 3C
mm10_v2_chr3_-_30969399_30969425	0.107781	UGUGCUU	ENSMUST00000177992.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000129817.2|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000168645.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000108255.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000064718.5|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000099163.3|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila)
mm10_v2_chr11_+_105589970_105590028	0.106671	UGUGCUU	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chr11_-_86544754_86544805	0.104478	UGUGCUU	ENSMUST00000138810.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000058286.2|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000154617.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1
mm10_v2_chr11_+_17051818_17051899	0.103294	UGUGCUU	ENSMUST00000058159.5|Cnrip1|ENSMUSG00000044629.5|cannabinoid receptor interacting protein 1
mm10_v2_chr4_+_131873608_131873679	0.100931	UGUGCUU	ENSMUST00000053819.3|Srsf4|ENSMUSG00000028911.10|serine/arginine-rich splicing factor 4
mm10_v2_chr13_+_92611119_92611139	0.100281	UGUGCUU	ENSMUST00000049488.7|Serinc5|ENSMUSG00000021703.8|serine incorporator 5
mm10_v2_chr4_-_70534904_70534987	0.100137	UGUGCUU	ENSMUST00000107359.2|Megf9|ENSMUSG00000039270.3|multiple EGF-like-domains 9
mm10_v2_chr14_+_103650208_103650243	0.0985866	UGUGCUU	ENSMUST00000069443.7|Slain1|ENSMUSG00000055717.7|SLAIN motif family, member 1
mm10_v2_chr13_-_98815408_98815449	0.0985745	UGUGCUU	ENSMUST00000040340.8|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000099277.4|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000179563.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000109403.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2
mm10_v2_chrX_-_23365044_23365090	0.0982954	UGUGCUU	ENSMUST00000115313.1|Klhl13|ENSMUSG00000036782.7|kelch-like 13
mm10_v2_chr5_-_51553896_51553921	0.0979745	UGUGCUU	ENSMUST00000132734.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm10_v2_chr9_-_114026711_114026764	0.0978318	UGUGCUU	ENSMUST00000117537.1|Fbxl2|ENSMUSG00000032507.9|F-box and leucine-rich repeat protein 2 	ENSMUST00000035090.7|Fbxl2|ENSMUSG00000032507.9|F-box and leucine-rich repeat protein 2
mm10_v2_chr15_-_82912134_82912190	0.0965725	UGUGCUU	ENSMUST00000048966.5|Tcf20|ENSMUSG00000041852.8|transcription factor 20 	ENSMUST00000109510.2|Tcf20|ENSMUSG00000041852.8|transcription factor 20
mm10_v2_chr3_-_51560816_51560878	0.0963403	UGUGCUU	ENSMUST00000037141.7|Setd7|ENSMUSG00000037111.8|SET domain containing (lysine methyltransferase) 7
mm10_v2_chr12_-_84218835_84218890	0.096089	UGUGCUU	ENSMUST00000046266.6|Elmsan1|ENSMUSG00000042507.8|ELM2 and Myb/SANT-like domain containing 1
mm10_v2_chr10_-_117224480_117224507	0.0957929	UGUGCUU	ENSMUST00000020382.6|Yeats4|ENSMUSG00000020171.7|YEATS domain containing 4
mm10_v2_chr13_-_55488038_55488111	0.0941769	UGUGCUU	ENSMUST00000109921.2|Dbn1|ENSMUSG00000034675.11|drebrin 1 	ENSMUST00000109923.2|Dbn1|ENSMUSG00000034675.11|drebrin 1 	ENSMUST00000021950.8|Dbn1|ENSMUSG00000034675.11|drebrin 1
mm10_v2_chr12_+_85599047_85599105	0.0938277	UGUGCUU	ENSMUST00000177587.1|Jdp2|ENSMUSG00000034271.9|Jun dimerization protein 2
mm10_v2_chr1_+_23761926_23761999	0.0911196	UGUGCUU	ENSMUST00000063663.5|B3gat2|ENSMUSG00000026156.8|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
mm10_v2_chr2_+_69722797_69722840	0.0904561	UGUGCUU	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr4_+_155491353_155491411	0.090103	UGUGCUU	ENSMUST00000165335.1|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1 	ENSMUST00000105616.3|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1 	ENSMUST00000030940.7|Gnb1|ENSMUSG00000029064.9|guanine nucleotide binding protein (G protein), beta 1
mm10_v2_chr15_+_84923383_84923428	0.0896348	UGUGCUU	ENSMUST00000165443.2|Nup50|ENSMUSG00000016619.9|nucleoporin 50
mm10_v2_chr10_-_53379816_53379858	0.0890787	UGUGCUU	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr17_+_28801090_28801145	0.0888786	UGUGCUU	ENSMUST00000004985.9|Brpf3|ENSMUSG00000063952.9|bromodomain and PHD finger containing, 3
mm10_v2_chr1_+_127774164_127774238	0.0888535	UGUGCUU	ENSMUST00000027587.8|Ccnt2|ENSMUSG00000026349.8|cyclin T2 	ENSMUST00000112570.1|Ccnt2|ENSMUSG00000026349.8|cyclin T2
mm10_v2_chr12_+_69372112_69372172	0.0887661	UGUGCUU	ENSMUST00000050063.7|Arf6|ENSMUSG00000044147.7|ADP-ribosylation factor 6
mm10_v2_chr3_-_58525867_58525873	0.0882766	UGUGCUU	ENSMUST00000029385.7|Serp1|ENSMUSG00000027808.7|stress-associated endoplasmic reticulum protein 1
mm10_v2_chr2_+_179442427_179442442	0.0868852	UGUGCUU	ENSMUST00000000314.6|Cdh4|ENSMUSG00000000305.6|cadherin 4
mm10_v2_chr1_+_165301863_165301863	0.086155	UGUGCUU	ENSMUST00000178700.1|Gpr161|ENSMUSG00000040836.9|G protein-coupled receptor 161
mm10_v2_chr15_-_53902472_53902530	0.0857973	UGUGCUU	ENSMUST00000078673.6|Samd12|ENSMUSG00000058656.6|sterile alpha motif domain containing 12
mm10_v2_chr1_-_190170671_190170744	0.0855047	UGUGCUU	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr17_-_44736648_44736674	0.0848842	UGUGCUU	ENSMUST00000113572.2|Runx2|ENSMUSG00000039153.10|runt related transcription factor 2
mm10_v2_chr6_+_87042838_87042918	0.0848653	UGUGCUU	ENSMUST00000113658.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000113657.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000113655.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000032057.7|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1
mm10_v2_chr8_+_33599608_33599655	0.0846433	UGUGCUU	ENSMUST00000009774.9|Ppp2cb|ENSMUSG00000009630.9|protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform
mm10_v2_chrX_-_7188713_7188743	0.0841207	UGUGCUU	ENSMUST00000004428.7|Clcn5|ENSMUSG00000004317.8|chloride channel 5
mm10_v2_chr1_+_44119952_44119985	0.0841021	UGUGCUU	ENSMUST00000114709.2|Bivm|ENSMUSG00000041684.5|basic, immunoglobulin-like variable motif containing
mm10_v2_chr10_-_94944578_94944578	0.0800388	UGUGCUU	ENSMUST00000099337.3|Plxnc1|ENSMUSG00000074785.4|plexin C1
mm10_v2_chr9_-_25151772_25151840	0.0797764	UGUGCUU	ENSMUST00000008573.7|Herpud2|ENSMUSG00000008429.7|HERPUD family member 2
mm10_v2_chr17_+_34592248_34592329	0.0795636	UGUGCUU	ENSMUST00000038149.6|Pbx2|ENSMUSG00000034673.8|pre B cell leukemia homeobox 2
mm10_v2_chr4_-_136835843_136835988	0.0772501	UGUGCUU	ENSMUST00000105846.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000059287.7|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000105845.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2
mm10_v2_chr1_+_192190771_192190821	0.0767224	UGUGCUU	ENSMUST00000078470.5|Kcnh1|ENSMUSG00000058248.6|potassium voltage-gated channel, subfamily H (eag-related), member 1 	ENSMUST00000110844.1|Kcnh1|ENSMUSG00000058248.6|potassium voltage-gated channel, subfamily H (eag-related), member 1
mm10_v2_chr3_-_97227364_97227421	0.0766152	UGUGCUU	ENSMUST00000046521.7|Bcl9|ENSMUSG00000038256.9|B cell CLL/lymphoma 9
mm10_v2_chr13_+_75089826_75089886	0.0756199	UGUGCUU	ENSMUST00000022075.4|Pcsk1|ENSMUSG00000021587.4|proprotein convertase subtilisin/kexin type 1
mm10_v2_chr15_+_86058727_86058793	0.0755783	UGUGCUU	ENSMUST00000138134.1|Gramd4|ENSMUSG00000035900.12|GRAM domain containing 4
mm10_v2_chr10_-_11082287_11082372	0.0748052	UGUGCUU	ENSMUST00000105561.2|Grm1|ENSMUSG00000019828.7|glutamate receptor, metabotropic 1 	ENSMUST00000044306.6|Grm1|ENSMUSG00000019828.7|glutamate receptor, metabotropic 1
mm10_v2_chr19_-_34255325_34255342	0.0717941	UGUGCUU	ENSMUST00000039631.8|Acta2|ENSMUSG00000035783.8|actin, alpha 2, smooth muscle, aorta
mm10_v2_chr11_+_94284652_94284652	0.0681205	UGUGCUU	ENSMUST00000178891.1|Gm21885|ENSMUSG00000094091.1|predicted gene, 21885
mm10_v2_chr3_+_96104498_96104571	0.0662207	UGUGCUU	ENSMUST00000132980.1|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000138206.1|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000090785.2|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000035519.5|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B
mm10_v2_chr1_+_160044374_160044452	0.0660378	UGUGCUU	ENSMUST00000163892.1|4930523C07Rik|ENSMUSG00000090394.2|RIKEN cDNA 4930523C07 gene
mm10_v2_chr11_-_97575210_97575236	0.0656548	UGUGCUU	ENSMUST00000107596.2|Srcin1|ENSMUSG00000038453.9|SRC kinase signaling inhibitor 1
mm10_v2_chr8_+_61224162_61224174	0.0653895	UGUGCUU	ENSMUST00000034060.5|Sh3rf1|ENSMUSG00000031642.8|SH3 domain containing ring finger 1
mm10_v2_chr10_+_52690496_52690554	0.0652691	UGUGCUU	ENSMUST00000105473.2|Slc35f1|ENSMUSG00000038602.7|solute carrier family 35, member F1
mm10_v2_chr5_-_96161990_96162097	0.0636528	UGUGCUU	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr2_-_45113255_45113279	0.0626639	UGUGCUU	ENSMUST00000068415.4|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2 	ENSMUST00000127520.1|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr10_-_26373956_26374088	0.0613019	UGUGCUU	ENSMUST00000105519.3|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila) 	ENSMUST00000040219.6|L3mbtl3|ENSMUSG00000039089.8|l(3)mbt-like 3 (Drosophila)
mm10_v2_chr7_-_34812677_34812693	0.0611821	UGUGCUU	ENSMUST00000078686.6|Chst8|ENSMUSG00000060402.6|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8
mm10_v2_chr1_+_172555932_172555942	0.0586976	UGUGCUU	ENSMUST00000061835.3|Vsig8|ENSMUSG00000049598.3|V-set and immunoglobulin domain containing 8
mm10_v2_chr3_+_92215835_92215920	0.0573734	UGUGCUU	ENSMUST00000074449.5|Sprr2a1|ENSMUSG00000078664.1|small proline-rich protein 2A1 	ENSMUST00000090871.2|Sprr2a2|ENSMUSG00000068893.4|small proline-rich protein 2A2
mm10_v2_chr9_+_3532295_3532354	0.0573519	UGUGCUU	ENSMUST00000115733.1|Gucy1a2|ENSMUSG00000041624.9|guanylate cyclase 1, soluble, alpha 2
mm10_v2_chr15_-_36794498_36794547	0.0572652	UGUGCUU	ENSMUST00000110361.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000022894.7|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000110359.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm10_v2_chr11_+_94936224_94936260	0.0545656	UGUGCUU	ENSMUST00000001547.7|Col1a1|ENSMUSG00000001506.10|collagen, type I, alpha 1
mm10_v2_chr7_+_101108768_101108783	0.0545375	UGUGCUU	ENSMUST00000098250.3|Fchsd2|ENSMUSG00000030691.8|FCH and double SH3 domains 2 	ENSMUST00000032931.7|Fchsd2|ENSMUSG00000030691.8|FCH and double SH3 domains 2
mm10_v2_chr4_-_111902754_111902918	0.0538488	UGUGCUU	ENSMUST00000102719.1|Slc5a9|ENSMUSG00000028544.8|solute carrier family 5 (sodium/glucose cotransporter), member 9 	ENSMUST00000102721.1|Slc5a9|ENSMUSG00000028544.8|solute carrier family 5 (sodium/glucose cotransporter), member 9
mm10_v2_chr9_-_58204310_58204327	0.0530232	UGUGCUU	ENSMUST00000114144.2|Islr2|ENSMUSG00000051243.7|immunoglobulin superfamily containing leucine-rich repeat 2
mm10_v2_chr1_+_178187417_178187713	0.0516333	UGUGCUU	ENSMUST00000161075.1|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2 	ENSMUST00000027783.7|Desi2|ENSMUSG00000026502.7|desumoylating isopeptidase 2
mm10_v2_chr10_-_67548944_67549001	0.0511354	UGUGCUU	ENSMUST00000075686.4|Ado|ENSMUSG00000057134.4|2-aminoethanethiol (cysteamine) dioxygenase
mm10_v2_chr12_+_105784694_105784872	0.0496231	UGUGCUU	ENSMUST00000109901.2|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000168186.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000163473.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000170540.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000166735.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000170002.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha
mm10_v2_chr3_-_65392579_65392623	0.0488145	UGUGCUU	ENSMUST00000029414.5|Ssr3|ENSMUSG00000027828.6|signal sequence receptor, gamma
mm10_v2_chr4_+_115839192_115839244	0.0485077	UGUGCUU	ENSMUST00000019677.5|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000144427.1|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000106513.3|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000130819.1|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000151203.1|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1 	ENSMUST00000140315.1|Mknk1|ENSMUSG00000028708.10|MAP kinase-interacting serine/threonine kinase 1
mm10_v2_chr18_+_35598607_35598653	0.0484609	UGUGCUU	ENSMUST00000041314.8|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115737.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115736.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115735.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2
mm10_v2_chr2_-_162661075_162661147	0.0463673	UGUGCUU	ENSMUST00000109442.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109445.2|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109443.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109441.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T
mm10_v2_chr3_+_89520152_89520175	0.0456075	UGUGCUU	ENSMUST00000000811.7|Kcnn3|ENSMUSG00000000794.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm10_v2_chr2_+_76406529_76406580	0.0455525	UGUGCUU	ENSMUST00000111929.1|Osbpl6|ENSMUSG00000042359.12|oxysterol binding protein-like 6 	ENSMUST00000077972.4|Osbpl6|ENSMUSG00000042359.12|oxysterol binding protein-like 6 	ENSMUST00000111930.2|Osbpl6|ENSMUSG00000042359.12|oxysterol binding protein-like 6
mm10_v2_chr5_+_19907502_19907551	0.0447675	UGUGCUU	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr5_-_22344690_22344710	0.0430181	UGUGCUU	ENSMUST00000062372.7|Reln|ENSMUSG00000042453.8|reelin 	ENSMUST00000161356.1|Reln|ENSMUSG00000042453.8|reelin
mm10_v2_chr16_-_50432340_50432409	0.0421434	UGUGCUU	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr7_-_121707253_121707460	0.0414388	UGUGCUU	ENSMUST00000046929.6|Usp31|ENSMUSG00000063317.6|ubiquitin specific peptidase 31
mm10_v2_chr12_+_84114321_84114391	0.0414274	UGUGCUU	ENSMUST00000123491.1|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1 	ENSMUST00000046340.2|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1 	ENSMUST00000136159.1|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1
mm10_v2_chr11_+_70844745_70844975	0.0409425	UGUGCUU	ENSMUST00000076270.6|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000179114.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000100928.4|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000177731.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000108533.3|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000081362.6|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000178245.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1
mm10_v2_chr13_-_103334429_103334500	0.0408098	UGUGCUU	ENSMUST00000167058.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4 	ENSMUST00000164111.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr9_-_121704996_121705041	0.0396473	UGUGCUU	ENSMUST00000078547.4|Sec22c|ENSMUSG00000061536.6|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
mm10_v2_chr11_-_88718223_88718294	0.0394115	UGUGCUU	ENSMUST00000107909.1|Msi2|ENSMUSG00000069769.7|musashi RNA-binding protein 2
mm10_v2_chr4_+_24973419_24973419	0.0383327	UGUGCUU	ENSMUST00000038920.1|Gpr63|ENSMUSG00000040372.2|G protein-coupled receptor 63
mm10_v2_chr3_+_152210458_152210534	0.0371997	UGUGCUU	ENSMUST00000166984.1|Fubp1|ENSMUSG00000028034.9|far upstream element (FUSE) binding protein 1 	ENSMUST00000106121.1|Fubp1|ENSMUSG00000028034.9|far upstream element (FUSE) binding protein 1
mm10_v2_chr11_+_117115195_117115257	0.0371398	UGUGCUU	ENSMUST00000103026.3|Sec14l1|ENSMUSG00000020823.10|SEC14-like 1 (S. cerevisiae) 	ENSMUST00000090433.5|Sec14l1|ENSMUSG00000020823.10|SEC14-like 1 (S. cerevisiae)
mm10_v2_chr11_+_19924354_19924375	0.0368987	UGUGCUU	ENSMUST00000093299.6|Spred2|ENSMUSG00000045671.11|sprouty-related, EVH1 domain containing 2
mm10_v2_chr6_-_128355826_128355856	0.0365604	UGUGCUU	ENSMUST00000001562.6|Tulp3|ENSMUSG00000001521.6|tubby-like protein 3
mm10_v2_chr16_-_16560201_16560223	0.0360462	UGUGCUU	ENSMUST00000162045.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000162124.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000161861.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4
mm10_v2_chr9_-_62980874_62980902	0.0347122	UGUGCUU	ENSMUST00000098651.4|Pias1|ENSMUSG00000032405.9|protein inhibitor of activated STAT 1
mm10_v2_chr1_-_152902628_152902669	0.0338511	UGUGCUU	ENSMUST00000111836.2|Smg7|ENSMUSG00000042772.9|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) 	ENSMUST00000073441.6|Smg7|ENSMUSG00000042772.9|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm10_v2_chr1_-_156718989_156719021	0.0331511	UGUGCUU	ENSMUST00000122424.1|Fam20b|ENSMUSG00000033557.11|family with sequence similarity 20, member B
mm10_v2_chr5_+_75152274_75152297	0.032562	UGUGCUU	ENSMUST00000000476.8|Pdgfra|ENSMUSG00000029231.9|platelet derived growth factor receptor, alpha polypeptide
mm10_v2_chr2_+_18677002_18677053	0.0318717	UGUGCUU	ENSMUST00000028071.6|Bmi1|ENSMUSG00000026739.7|Bmi1 polycomb ring finger oncogene
mm10_v2_chr16_+_35983307_35983395	0.0307985	UGUGCUU	ENSMUST00000004054.6|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr3_-_80802789_80802840	0.0306391	UGUGCUU	ENSMUST00000107745.1|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2) 	ENSMUST00000075316.4|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm10_v2_chr9_+_114688782_114688813	0.0287654	UGUGCUU	ENSMUST00000047404.6|Dync1li1|ENSMUSG00000032435.8|dynein cytoplasmic 1 light intermediate chain 1
mm10_v2_chr9_+_26733728_26733824	0.0275592	UGUGCUU	ENSMUST00000160899.1|B3gat1|ENSMUSG00000045994.10|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) 	ENSMUST00000161431.1|B3gat1|ENSMUSG00000045994.10|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) 	ENSMUST00000159799.1|B3gat1|ENSMUSG00000045994.10|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
mm10_v2_chr15_-_66286224_66286224	0.0270871	UGUGCUU	ENSMUST00000070256.7|Kcnq3|ENSMUSG00000056258.8|potassium voltage-gated channel, subfamily Q, member 3
mm10_v2_chr9_+_58823512_58823512	0.0265428	UGUGCUU	ENSMUST00000034889.8|Hcn4|ENSMUSG00000032338.8|hyperpolarization-activated, cyclic nucleotide-gated K+ 4
mm10_v2_chr1_-_165634451_165634576	0.0234145	UGUGCUU	ENSMUST00000111435.2|Mpzl1|ENSMUSG00000026566.9|myelin protein zero-like 1 	ENSMUST00000068705.7|Mpzl1|ENSMUSG00000026566.9|myelin protein zero-like 1
mm10_v2_chrX_+_71364745_71364794	0.0217858	UGUGCUU	ENSMUST00000114601.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1 	ENSMUST00000146213.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1 	ENSMUST00000015358.1|Mtmr1|ENSMUSG00000015214.8|myotubularin related protein 1
mm10_v2_chr6_-_24664960_24665038	0.0204982	UGUGCUU	ENSMUST00000041737.7|Wasl|ENSMUSG00000029684.8|Wiskott-Aldrich syndrome-like (human) 	ENSMUST00000031695.8|Wasl|ENSMUSG00000029684.8|Wiskott-Aldrich syndrome-like (human)
mm10_v2_chr9_+_118926453_118926568	0.0202823	UGUGCUU	ENSMUST00000073109.5|Ctdspl|ENSMUSG00000047409.7|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
mm10_v2_chr10_+_116018213_116018421	0.0201784	UGUGCUU	ENSMUST00000063470.4|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr11_-_101967005_101967021	0.0201373	UGUGCUU	ENSMUST00000001534.6|Sost|ENSMUSG00000001494.6|sclerostin
mm10_v2_chr14_-_20668269_20668354	0.0200896	UGUGCUU	ENSMUST00000057090.5|Synpo2l|ENSMUSG00000039376.7|synaptopodin 2-like 	ENSMUST00000117386.1|Synpo2l|ENSMUSG00000039376.7|synaptopodin 2-like
mm10_v2_chr11_+_53350783_53350833	0.0195835	UGUGCUU	ENSMUST00000060945.5|Aff4|ENSMUSG00000049470.7|AF4/FMR2 family, member 4
mm10_v2_chr6_+_145211134_145211222	0.0181238	UGUGCUU	ENSMUST00000111725.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111726.3|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000039729.3|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111723.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111724.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111721.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111719.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5
mm10_v2_chr12_+_3807017_3807063	0.0179951	UGUGCUU	ENSMUST00000020991.8|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A 	ENSMUST00000172509.1|Dnmt3a|ENSMUSG00000020661.9|DNA methyltransferase 3A
mm10_v2_chr15_+_99670574_99670718	0.0176352	UGUGCUU	ENSMUST00000023758.7|Asic1|ENSMUSG00000023017.9|acid-sensing (proton-gated) ion channel 1
mm10_v2_chr4_-_149955028_149955048	0.017251	UGUGCUU	ENSMUST00000038562.2|Spsb1|ENSMUSG00000039911.7|splA/ryanodine receptor domain and SOCS box containing 1
mm10_v2_chr6_+_14901344_14901364	0.0169884	UGUGCUU	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr14_-_21052420_21052450	0.0165217	UGUGCUU	ENSMUST00000154460.1|Ap3m1|ENSMUSG00000021824.6|adaptor-related protein complex 3, mu 1 subunit
mm10_v2_chr16_+_55973881_55973892	0.0163454	UGUGCUU	ENSMUST00000050248.8|Rpl24|ENSMUSG00000022601.11|ribosomal protein L24
mm10_v2_chr3_+_92250647_92250647	0.0152478	UGUGCUU	ENSMUST00000071805.2|Sprr2a2|ENSMUSG00000068893.4|small proline-rich protein 2A2
mm10_v2_chr8_+_56551090_56551143	0.0150169	UGUGCUU	ENSMUST00000040218.5|Fbxo8|ENSMUSG00000038206.6|F-box protein 8 	ENSMUST00000110322.3|Fbxo8|ENSMUSG00000038206.6|F-box protein 8
mm10_v2_chr11_+_34314757_34314822	0.0147011	UGUGCUU	ENSMUST00000165963.1|Fam196b|ENSMUSG00000069911.4|family with sequence similarity 196, member B 	ENSMUST00000093192.3|Fam196b|ENSMUSG00000069911.4|family with sequence similarity 196, member B
mm10_v2_chr15_+_102406143_102406380	0.0144269	UGUGCUU	ENSMUST00000170884.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000165924.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000163709.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000001326.6|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr6_-_39725448_39725478	0.0140667	UGUGCUU	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr6_-_99266494_99266540	0.0138418	UGUGCUU	ENSMUST00000113326.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr12_-_83921899_83921934	0.0134177	UGUGCUU	ENSMUST00000117217.1|Numb|ENSMUSG00000021224.8|numb gene homolog (Drosophila)
mm10_v2_chr8_+_104340594_104340622	0.0117847	UGUGCUU	ENSMUST00000034343.4|Cmtm3|ENSMUSG00000031875.6|CKLF-like MARVEL transmembrane domain containing 3
mm10_v2_chr6_+_149408973_149409038	0.0114854	UGUGCUU	ENSMUST00000086829.4|Bicd1|ENSMUSG00000003452.9|bicaudal D homolog 1 (Drosophila) 	ENSMUST00000111513.2|Bicd1|ENSMUSG00000003452.9|bicaudal D homolog 1 (Drosophila)
mm10_v2_chr1_+_42697146_42697146	0.0105312	UGUGCUU	ENSMUST00000054883.2|Pou3f3|ENSMUSG00000045515.2|POU domain, class 3, transcription factor 3
mm10_v2_chr19_-_60581013_60581025	0.0103589	UGUGCUU	ENSMUST00000111460.3|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1 	ENSMUST00000081790.7|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1 	ENSMUST00000166712.1|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1
mm10_v2_chr8_+_93810832_93810843	0.00868395	UGUGCUU	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr9_-_107635330_107635353	0.00861521	UGUGCUU	ENSMUST00000055704.6|Gnai2|ENSMUSG00000032562.8|guanine nucleotide binding protein (G protein), alpha inhibiting 2
mm10_v2_chrX_-_72918411_72918424	0.00742831	UGUGCUU	ENSMUST00000114551.3|Cetn2|ENSMUSG00000031347.6|centrin 2
mm10_v2_chr3_+_59006978_59006978	0.0068393	UGUGCUU	ENSMUST00000040325.7|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000164225.1|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000040846.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000029393.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like
mm10_v2_chrX_+_66649318_66649394	0.00594162	UGUGCUU	ENSMUST00000166241.1|Slitrk2|ENSMUSG00000036790.5|SLIT and NTRK-like family, member 2
mm10_v2_chr3_-_158562199_158562290	0.00506196	UGUGCUU	ENSMUST00000106044.1|Lrrc7|ENSMUSG00000028176.7|leucine rich repeat containing 7
mm10_v2_chr10_+_128411616_128411676	0.0045888	UGUGCUU	ENSMUST00000096386.5|Rnf41|ENSMUSG00000025373.7|ring finger protein 41 	ENSMUST00000171342.1|Rnf41|ENSMUSG00000025373.7|ring finger protein 41
mm10_v2_chr10_-_116581478_116581511	0.00398014	UGUGCUU	ENSMUST00000105267.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000105265.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000167706.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000168036.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000169921.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000020374.5|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2
mm10_v2_chr4_+_11156411_11156453	0.00376532	UGUGCUU	ENSMUST00000029865.3|Trp53inp1|ENSMUSG00000028211.5|transformation related protein 53 inducible nuclear protein 1
mm10_v2_chr9_-_15279860_15279877	0.00254624	UGUGCUU	ENSMUST00000034411.8|Med17|ENSMUSG00000031935.8|mediator complex subunit 17
mm10_v2_chr11_+_96323253_96323326	0.00191823	UGUGCUU	ENSMUST00000093944.3|Hoxb3|ENSMUSG00000048763.5|homeobox B3
mm10_v2_chr12_+_86241848_86241936	0.00121091	UGUGCUU	ENSMUST00000071106.4|Gpatch2l|ENSMUSG00000021254.8|G patch domain containing 2 like
mm10_v2_chr12_+_70825492_70825514	0.00118761	UGUGCUU	ENSMUST00000057859.7|Frmd6|ENSMUSG00000048285.8|FERM domain containing 6
