mm10_v2_chr2_+_160645881_160645896	1.94063	UCACAUU	ENSMUST00000109468.2|Top1|ENSMUSG00000070544.6|topoisomerase (DNA) I
mm10_v2_chr3_+_14886426_14886426	1.44031	UCACAUU	ENSMUST00000029078.7|Car2|ENSMUSG00000027562.7|carbonic anhydrase 2
mm10_v2_chr8_+_57511833_57511869	1.37874	UCACAUU	ENSMUST00000067925.6|Hmgb2|ENSMUSG00000054717.6|high mobility group box 2
mm10_v2_chr19_-_60790692_60790700	1.22502	UCACAUU	ENSMUST00000025955.6|Eif3a|ENSMUSG00000024991.7|eukaryotic translation initiation factor 3, subunit A
mm10_v2_chr14_+_99046406_99046429	1.1271	UCACAUU	ENSMUST00000022656.6|Bora|ENSMUSG00000022070.6|bora, aurora kinase A activator
mm10_v2_chr9_-_85327110_85327128	1.02398	UCACAUU	ENSMUST00000034802.8|Fam46a|ENSMUSG00000032265.8|family with sequence similarity 46, member A
mm10_v2_chr15_-_5244178_5244192	0.989	UCACAUU	ENSMUST00000047379.8|Ptger4|ENSMUSG00000039942.9|prostaglandin E receptor 4 (subtype EP4)
mm10_v2_chr5_+_124439891_124439991	0.962166	UCACAUU	ENSMUST00000059580.4|Setd8|ENSMUSG00000049327.11|SET domain containing (lysine methyltransferase) 8
mm10_v2_chr2_-_105399286_105399319	0.953579	UCACAUU	ENSMUST00000006128.6|Rcn1|ENSMUSG00000005973.6|reticulocalbin 1
mm10_v2_chrX_+_109095359_109095391	0.925141	UCACAUU	ENSMUST00000033598.8|Sh3bgrl|ENSMUSG00000031246.8|SH3-binding domain glutamic acid-rich protein like
mm10_v2_chrX_+_42067836_42067872	0.90652	UCACAUU	ENSMUST00000115094.1|Xiap|ENSMUSG00000025860.8|X-linked inhibitor of apoptosis
mm10_v2_chr6_+_17281185_17281204	0.893814	UCACAUU	ENSMUST00000000058.6|Cav2|ENSMUSG00000000058.6|caveolin 2
mm10_v2_chr2_+_14229390_14229414	0.874648	UCACAUU	ENSMUST00000028045.2|Mrc1|ENSMUSG00000026712.2|mannose receptor, C type 1
mm10_v2_chr19_+_21778325_21778363	0.867689	UCACAUU	ENSMUST00000096194.2|Tmem2|ENSMUSG00000024754.6|transmembrane protein 2 	ENSMUST00000025663.6|Tmem2|ENSMUSG00000024754.6|transmembrane protein 2
mm10_v2_chr12_+_76370266_76370266	0.847352	UCACAUU	ENSMUST00000042779.3|Zbtb1|ENSMUSG00000033454.6|zinc finger and BTB domain containing 1
mm10_v2_chr2_-_70825726_70825820	0.845506	UCACAUU	ENSMUST00000038584.8|Tlk1|ENSMUSG00000041997.10|tousled-like kinase 1
mm10_v2_chr12_+_83632208_83632325	0.82981	UCACAUU	ENSMUST00000048155.9|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182618.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000183154.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182036.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182347.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25
mm10_v2_chr19_+_36926071_36926177	0.809301	UCACAUU	ENSMUST00000099494.3|Btaf1|ENSMUSG00000040565.7|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)
mm10_v2_chr16_-_74411292_74411430	0.798258	UCACAUU	ENSMUST00000117200.1|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr14_+_56887795_56887795	0.77919	UCACAUU	ENSMUST00000022511.8|Zmym2|ENSMUSG00000021945.8|zinc finger, MYM-type 2
mm10_v2_chr10_+_85102627_85102719	0.746307	UCACAUU	ENSMUST00000095383.4|AI597468|ENSMUSG00000060935.5|expressed sequence AI597468
mm10_v2_chr3_+_3508024_3508069	0.744903	UCACAUU	ENSMUST00000108393.1|Hnf4g|ENSMUSG00000017688.8|hepatocyte nuclear factor 4, gamma 	ENSMUST00000017832.8|Hnf4g|ENSMUSG00000017688.8|hepatocyte nuclear factor 4, gamma
mm10_v2_chr7_+_98703091_98703137	0.740009	UCACAUU	ENSMUST00000033009.9|Prkrir|ENSMUSG00000030753.9|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
mm10_v2_chr13_-_100650981_100651085	0.722308	UCACAUU	ENSMUST00000022136.6|Rad17|ENSMUSG00000021635.7|RAD17 homolog (S. pombe) 	ENSMUST00000177848.1|Rad17|ENSMUSG00000021635.7|RAD17 homolog (S. pombe)
mm10_v2_chr11_+_93886157_93886219	0.701449	UCACAUU	ENSMUST00000063718.4|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1 	ENSMUST00000107854.2|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1
mm10_v2_chr10_+_108162358_108162408	0.698364	UCACAUU	ENSMUST00000070663.5|Ppp1r12a|ENSMUSG00000019907.9|protein phosphatase 1, regulatory (inhibitor) subunit 12A
mm10_v2_chr3_-_122984404_122984512	0.694264	UCACAUU	ENSMUST00000090379.2|Usp53|ENSMUSG00000039701.7|ubiquitin specific peptidase 53
mm10_v2_chr10_+_89744988_89745022	0.688505	UCACAUU	ENSMUST00000020112.5|Uhrf1bp1l|ENSMUSG00000019951.9|UHRF1 (ICBP90) binding protein 1-like
mm10_v2_chr6_-_39206782_39206831	0.68425	UCACAUU	ENSMUST00000002305.8|Jhdm1d|ENSMUSG00000042599.8|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm10_v2_chr10_-_86705485_86705509	0.673234	UCACAUU	ENSMUST00000020238.7|Hsp90b1|ENSMUSG00000020048.7|heat shock protein 90, beta (Grp94), member 1
mm10_v2_chr1_-_80340480_80340512	0.67124	UCACAUU	ENSMUST00000163119.1|Cul3|ENSMUSG00000004364.8|cullin 3
mm10_v2_chr14_+_74640840_74640887	0.665642	UCACAUU	ENSMUST00000036653.3|Htr2a|ENSMUSG00000034997.4|5-hydroxytryptamine (serotonin) receptor 2A
mm10_v2_chr6_+_141249161_141249269	0.655805	UCACAUU	ENSMUST00000043259.7|Pde3a|ENSMUSG00000041741.8|phosphodiesterase 3A, cGMP inhibited
mm10_v2_chrX_+_85574018_85574150	0.638352	UCACAUU	ENSMUST00000048250.3|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3 	ENSMUST00000137438.1|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3 	ENSMUST00000146063.1|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3
mm10_v2_chr4_+_13743424_13743478	0.623638	UCACAUU	ENSMUST00000006761.3|Runx1t1|ENSMUSG00000006586.9|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm10_v2_chr14_+_75284343_75284390	0.622734	UCACAUU	ENSMUST00000022577.5|Zc3h13|ENSMUSG00000022000.10|zinc finger CCCH type containing 13
mm10_v2_chr19_+_36834215_36834297	0.619988	UCACAUU	ENSMUST00000025729.5|Tnks2|ENSMUSG00000024811.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm10_v2_chr1_-_64737735_64737756	0.616191	UCACAUU	ENSMUST00000063982.5|Fzd5|ENSMUSG00000045005.8|frizzled homolog 5 (Drosophila) 	ENSMUST00000116133.2|Fzd5|ENSMUSG00000045005.8|frizzled homolog 5 (Drosophila)
mm10_v2_chr12_+_103532435_103532565	0.604429	UCACAUU	ENSMUST00000021631.5|Ppp4r4|ENSMUSG00000021209.6|protein phosphatase 4, regulatory subunit 4
mm10_v2_chr14_-_79481268_79481449	0.582386	UCACAUU	ENSMUST00000022601.5|Wbp4|ENSMUSG00000022023.5|WW domain binding protein 4
mm10_v2_chr4_-_34882919_34882964	0.575501	UCACAUU	ENSMUST00000098163.2|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292 	ENSMUST00000047950.5|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292
mm10_v2_chr5_-_148399901_148399912	0.570065	UCACAUU	ENSMUST00000048116.8|Slc7a1|ENSMUSG00000041313.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
mm10_v2_chr17_-_51832666_51832678	0.563208	UCACAUU	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr14_+_31019125_31019157	0.560351	UCACAUU	ENSMUST00000112095.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000112098.3|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000112106.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000146325.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1
mm10_v2_chr15_-_96642883_96642984	0.558321	UCACAUU	ENSMUST00000088452.4|Slc38a1|ENSMUSG00000023169.8|solute carrier family 38, member 1
mm10_v2_chr3_+_51415986_51416044	0.550894	UCACAUU	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr4_+_15265798_15265831	0.534566	UCACAUU	ENSMUST00000062684.8|Tmem64|ENSMUSG00000043252.8|transmembrane protein 64
mm10_v2_chr2_-_84425258_84425411	0.528506	UCACAUU	ENSMUST00000074262.2|Calcrl|ENSMUSG00000059588.7|calcitonin receptor-like
mm10_v2_chr9_-_121495678_121495689	0.526661	UCACAUU	ENSMUST00000035120.4|Cck|ENSMUSG00000032532.6|cholecystokinin
mm10_v2_chr5_-_106696819_106696839	0.523527	UCACAUU	ENSMUST00000127434.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112696.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112698.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644
mm10_v2_chr14_+_14703025_14703073	0.5175	UCACAUU	ENSMUST00000057015.6|Slc4a7|ENSMUSG00000021733.9|solute carrier family 4, sodium bicarbonate cotransporter, member 7
mm10_v2_chr6_+_134981998_134982002	0.517245	UCACAUU	ENSMUST00000167323.1|Apold1|ENSMUSG00000090698.1|apolipoprotein L domain containing 1
mm10_v2_chr9_-_14751987_14752122	0.517152	UCACAUU	ENSMUST00000061498.5|Fut4|ENSMUSG00000049307.5|fucosyltransferase 4
mm10_v2_chr2_-_104816696_104816792	0.515866	UCACAUU	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chrX_+_68678541_68678554	0.504999	UCACAUU	ENSMUST00000088546.5|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chrX_+_160390684_160390730	0.495664	UCACAUU	ENSMUST00000112408.2|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112402.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112401.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112400.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112405.2|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112404.2|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000146805.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64
mm10_v2_chr9_+_13662460_13662460	0.494902	UCACAUU	ENSMUST00000177755.1|Maml2|ENSMUSG00000031925.10|mastermind like 2 (Drosophila)
mm10_v2_chr4_-_58553311_58553357	0.49067	UCACAUU	ENSMUST00000107571.1|Lpar1|ENSMUSG00000038668.8|lysophosphatidic acid receptor 1 	ENSMUST00000055018.4|Lpar1|ENSMUSG00000038668.8|lysophosphatidic acid receptor 1
mm10_v2_chr6_+_143167210_143167267	0.486281	UCACAUU	ENSMUST00000032413.4|Etnk1|ENSMUSG00000030275.4|ethanolamine kinase 1
mm10_v2_chr13_-_103920508_103920572	0.483381	UCACAUU	ENSMUST00000053927.5|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein 	ENSMUST00000091269.4|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein 	ENSMUST00000022222.5|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein
mm10_v2_chr10_-_40883073_40883143	0.477684	UCACAUU	ENSMUST00000044166.7|Cdc40|ENSMUSG00000038446.7|cell division cycle 40
mm10_v2_chr14_+_14012491_14012693	0.475864	UCACAUU	ENSMUST00000022257.2|Atxn7|ENSMUSG00000021738.4|ataxin 7
mm10_v2_chr11_-_40755201_40755311	0.470501	UCACAUU	ENSMUST00000020576.7|Ccng1|ENSMUSG00000020326.7|cyclin G1
mm10_v2_chr12_+_78748947_78748971	0.469691	UCACAUU	ENSMUST00000082024.5|Mpp5|ENSMUSG00000021112.8|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm10_v2_chr16_-_32079270_32079368	0.450989	UCACAUU	ENSMUST00000023467.8|Pak2|ENSMUSG00000022781.8|p21 protein (Cdc42/Rac)-activated kinase 2
mm10_v2_chr3_-_105801323_105801377	0.446115	UCACAUU	ENSMUST00000090678.6|Rap1a|ENSMUSG00000068798.6|RAS-related protein-1a
mm10_v2_chr2_+_164074122_164074218	0.443655	UCACAUU	ENSMUST00000018353.7|Stk4|ENSMUSG00000018209.9|serine/threonine kinase 4
mm10_v2_chr2_+_153741274_153741294	0.442487	UCACAUU	ENSMUST00000028981.8|Mapre1|ENSMUSG00000027479.8|microtubule-associated protein, RP/EB family, member 1
mm10_v2_chr8_-_90348343_90348386	0.432549	UCACAUU	ENSMUST00000109621.3|Tox3|ENSMUSG00000043668.7|TOX high mobility group box family member 3
mm10_v2_chr5_-_107289561_107289637	0.420928	UCACAUU	ENSMUST00000031224.8|Tgfbr3|ENSMUSG00000029287.8|transforming growth factor, beta receptor III
mm10_v2_chr10_-_45470201_45470260	0.419976	UCACAUU	ENSMUST00000079390.6|Lin28b|ENSMUSG00000063804.7|lin-28 homolog B (C. elegans)
mm10_v2_chr12_+_16894894_16894978	0.412641	UCACAUU	ENSMUST00000020904.6|Rock2|ENSMUSG00000020580.9|Rho-associated coiled-coil containing protein kinase 2
mm10_v2_chr2_-_6884975_6884996	0.408247	UCACAUU	ENSMUST00000114924.3|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000170438.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000114934.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr16_+_44139821_44139900	0.404237	UCACAUU	ENSMUST00000159514.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000161326.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063520.8|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063542.7|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm10_v2_chr5_-_96161990_96162097	0.400223	UCACAUU	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr7_-_67372846_67372858	0.396716	UCACAUU	ENSMUST00000156690.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000107476.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000076325.5|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000032776.8|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000133074.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A
mm10_v2_chr5_+_96997676_96997766	0.391261	UCACAUU	ENSMUST00000112974.1|Bmp2k|ENSMUSG00000034663.7|BMP2 inducible kinase 	ENSMUST00000035635.7|Bmp2k|ENSMUSG00000034663.7|BMP2 inducible kinase
mm10_v2_chr16_+_58408443_58408523	0.389924	UCACAUU	ENSMUST00000046663.7|Dcbld2|ENSMUSG00000035107.7|discoidin, CUB and LCCL domain containing 2
mm10_v2_chr18_+_73573044_73573044	0.386466	UCACAUU	ENSMUST00000091852.4|Mex3c|ENSMUSG00000037253.8|mex3 homolog C (C. elegans)
mm10_v2_chr14_-_67008834_67008877	0.385985	UCACAUU	ENSMUST00000111115.1|Bnip3l|ENSMUSG00000022051.9|BCL2/adenovirus E1B interacting protein 3-like 	ENSMUST00000022634.8|Bnip3l|ENSMUSG00000022051.9|BCL2/adenovirus E1B interacting protein 3-like
mm10_v2_chr13_-_89742490_89742515	0.384213	UCACAUU	ENSMUST00000109546.2|Vcan|ENSMUSG00000021614.10|versican
mm10_v2_chr5_+_32458974_32459110	0.372869	UCACAUU	ENSMUST00000015100.8|Ppp1cb|ENSMUSG00000014956.9|protein phosphatase 1, catalytic subunit, beta isoform
mm10_v2_chr10_+_11281304_11281357	0.366407	UCACAUU	ENSMUST00000129456.1|Fbxo30|ENSMUSG00000047648.7|F-box protein 30
mm10_v2_chr11_-_6475992_6476102	0.364575	UCACAUU	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr5_-_124425907_124425946	0.351049	UCACAUU	ENSMUST00000065263.5|Sbno1|ENSMUSG00000038095.9|sno, strawberry notch homolog 1 (Drosophila)
mm10_v2_chr12_+_51348019_51348061	0.349711	UCACAUU	ENSMUST00000054308.6|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chr6_+_95117740_95117880	0.340337	UCACAUU	ENSMUST00000032107.7|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8 	ENSMUST00000119582.1|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8
mm10_v2_chr8_+_105636509_105636589	0.339697	UCACAUU	ENSMUST00000005841.9|Ctcf|ENSMUSG00000005698.9|CCCTC-binding factor
mm10_v2_chr6_-_120038647_120038699	0.321763	UCACAUU	ENSMUST00000088646.5|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000177761.1|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000088644.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000060043.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1
mm10_v2_chr1_+_177444653_177444669	0.321323	UCACAUU	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr4_-_83052147_83052185	0.320942	UCACAUU	ENSMUST00000170248.2|Frem1|ENSMUSG00000059049.8|Fras1 related extracellular matrix protein 1
mm10_v2_chrX_+_18162575_18162657	0.31943	UCACAUU	ENSMUST00000044484.6|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A 	ENSMUST00000052368.8|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A
mm10_v2_chr4_-_11007635_11007676	0.319113	UCACAUU	ENSMUST00000054776.3|Plekhf2|ENSMUSG00000049969.3|pleckstrin homology domain containing, family F (with FYVE domain) member 2
mm10_v2_chr2_+_128818104_128818135	0.318969	UCACAUU	ENSMUST00000110325.1|Tmem87b|ENSMUSG00000014353.8|transmembrane protein 87B
mm10_v2_chr15_-_82912134_82912190	0.315017	UCACAUU	ENSMUST00000048966.5|Tcf20|ENSMUSG00000041852.8|transcription factor 20 	ENSMUST00000109510.2|Tcf20|ENSMUSG00000041852.8|transcription factor 20
mm10_v2_chr4_-_88033328_88033373	0.313027	UCACAUU	ENSMUST00000078090.5|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr18_-_56975333_56975376	0.309895	UCACAUU	ENSMUST00000139243.2|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene 	ENSMUST00000025488.8|C330018D20Rik|ENSMUSG00000024592.9|RIKEN cDNA C330018D20 gene
mm10_v2_chr4_+_116221633_116221661	0.308717	UCACAUU	ENSMUST00000030464.7|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr12_-_75596195_75596261	0.308249	UCACAUU	ENSMUST00000021447.7|Ppp2r5e|ENSMUSG00000021051.9|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform
mm10_v2_chr16_-_42340595_42340651	0.304897	UCACAUU	ENSMUST00000102817.4|Gap43|ENSMUSG00000047261.9|growth associated protein 43
mm10_v2_chr13_+_34875488_34875515	0.303457	UCACAUU	ENSMUST00000077853.3|Prpf4b|ENSMUSG00000021413.8|PRP4 pre-mRNA processing factor 4 homolog B (yeast)
mm10_v2_chr6_-_83441674_83441684	0.302629	UCACAUU	ENSMUST00000089622.4|Tet3|ENSMUSG00000034832.9|tet methylcytosine dioxygenase 3
mm10_v2_chr5_-_131616599_131616611	0.302401	UCACAUU	ENSMUST00000161804.1|Auts2|ENSMUSG00000029673.11|autism susceptibility candidate 2
mm10_v2_chr3_+_7366598_7366641	0.299238	UCACAUU	ENSMUST00000028999.6|Pkia|ENSMUSG00000027499.7|protein kinase inhibitor, alpha
mm10_v2_chr10_-_91171525_91171610	0.298466	UCACAUU	ENSMUST00000072239.7|Tmpo|ENSMUSG00000019961.10|thymopoietin 	ENSMUST00000092219.6|Tmpo|ENSMUSG00000019961.10|thymopoietin 	ENSMUST00000099355.4|Tmpo|ENSMUSG00000019961.10|thymopoietin 	ENSMUST00000105293.3|Tmpo|ENSMUSG00000019961.10|thymopoietin 	ENSMUST00000020123.5|Tmpo|ENSMUSG00000019961.10|thymopoietin
mm10_v2_chr10_+_53596936_53597004	0.29529	UCACAUU	ENSMUST00000020004.6|Asf1a|ENSMUSG00000019857.6|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
mm10_v2_chrX_-_143827391_143827414	0.29364	UCACAUU	ENSMUST00000087316.5|Capn6|ENSMUSG00000067276.5|calpain 6
mm10_v2_chr8_-_60983215_60983319	0.292903	UCACAUU	ENSMUST00000004430.7|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000110301.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000093490.2|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr1_-_161876656_161876682	0.292306	UCACAUU	ENSMUST00000048377.5|Suco|ENSMUSG00000040297.7|SUN domain containing ossification factor
mm10_v2_chr16_-_64786321_64786321	0.287059	UCACAUU	ENSMUST00000052588.4|Zfp654|ENSMUSG00000047141.4|zinc finger protein 654
mm10_v2_chr6_-_4086914_4086972	0.286867	UCACAUU	ENSMUST00000049166.4|Bet1|ENSMUSG00000032757.4|blocked early in transport 1 homolog (S. cerevisiae)
mm10_v2_chr9_+_70678950_70679010	0.282422	UCACAUU	ENSMUST00000067880.6|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr5_-_86172747_86172803	0.28083	UCACAUU	ENSMUST00000039373.7|Uba6|ENSMUSG00000035898.7|ubiquitin-like modifier activating enzyme 6
mm10_v2_chr1_+_63273261_63273275	0.280456	UCACAUU	ENSMUST00000114132.1|Zdbf2|ENSMUSG00000027520.9|zinc finger, DBF-type containing 2 	ENSMUST00000126932.1|Zdbf2|ENSMUSG00000027520.9|zinc finger, DBF-type containing 2
mm10_v2_chr10_+_82859198_82859217	0.279729	UCACAUU	ENSMUST00000020484.6|Txnrd1|ENSMUSG00000020250.9|thioredoxin reductase 1
mm10_v2_chr2_-_103797617_103797662	0.27953	UCACAUU	ENSMUST00000028607.6|Caprin1|ENSMUSG00000027184.8|cell cycle associated protein 1
mm10_v2_chr1_+_138963709_138963808	0.277216	UCACAUU	ENSMUST00000168527.1|Dennd1b|ENSMUSG00000056268.9|DENN/MADD domain containing 1B
mm10_v2_chr2_-_104849876_104849950	0.274194	UCACAUU	ENSMUST00000028593.4|Prrg4|ENSMUSG00000027171.4|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
mm10_v2_chrX_+_37126777_37126795	0.274138	UCACAUU	ENSMUST00000016553.4|Nkap|ENSMUSG00000016409.4|NFKB activating protein
mm10_v2_chr14_+_16365171_16365194	0.272626	UCACAUU	ENSMUST00000017629.4|Top2b|ENSMUSG00000017485.4|topoisomerase (DNA) II beta
mm10_v2_chr14_+_105258573_105258629	0.271295	UCACAUU	ENSMUST00000181969.1|Ndfip2|ENSMUSG00000053253.10|Nedd4 family interacting protein 2
mm10_v2_chr13_-_8871696_8871749	0.267999	UCACAUU	ENSMUST00000054251.6|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37 	ENSMUST00000176813.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr9_+_95857597_95857686	0.265029	UCACAUU	ENSMUST00000034980.7|Atr|ENSMUSG00000032409.8|ataxia telangiectasia and Rad3 related
mm10_v2_chr1_+_127774164_127774238	0.264102	UCACAUU	ENSMUST00000027587.8|Ccnt2|ENSMUSG00000026349.8|cyclin T2 	ENSMUST00000112570.1|Ccnt2|ENSMUSG00000026349.8|cyclin T2
mm10_v2_chr10_+_4266323_4266341	0.261493	UCACAUU	ENSMUST00000045730.5|Akap12|ENSMUSG00000038587.8|A kinase (PRKA) anchor protein (gravin) 12
mm10_v2_chr7_+_80186835_80186904	0.260424	UCACAUU	ENSMUST00000107383.1|Sema4b|ENSMUSG00000030539.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 	ENSMUST00000032754.7|Sema4b|ENSMUSG00000030539.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
mm10_v2_chr3_-_89913144_89913172	0.259441	UCACAUU	ENSMUST00000029559.6|Il6ra|ENSMUSG00000027947.7|interleukin 6 receptor, alpha
mm10_v2_chr11_-_50827681_50827742	0.258814	UCACAUU	ENSMUST00000109135.2|Zfp354c|ENSMUSG00000044807.7|zinc finger protein 354C
mm10_v2_chr19_+_24673998_24674017	0.25818	UCACAUU	ENSMUST00000057243.4|Tmem252|ENSMUSG00000048572.4|transmembrane protein 252
mm10_v2_chr13_+_92611119_92611139	0.257404	UCACAUU	ENSMUST00000049488.7|Serinc5|ENSMUSG00000021703.8|serine incorporator 5
mm10_v2_chr3_-_95818941_95818990	0.255778	UCACAUU	ENSMUST00000090791.3|Rprd2|ENSMUSG00000028106.9|regulation of nuclear pre-mRNA domain containing 2
mm10_v2_chr11_+_77686155_77686179	0.253388	UCACAUU	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr7_+_123123870_123123901	0.25124	UCACAUU	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr11_-_84870712_84870807	0.250376	UCACAUU	ENSMUST00000170741.1|Ggnbp2|ENSMUSG00000020530.8|gametogenetin binding protein 2 	ENSMUST00000172405.1|Ggnbp2|ENSMUSG00000020530.8|gametogenetin binding protein 2 	ENSMUST00000100686.3|Ggnbp2|ENSMUSG00000020530.8|gametogenetin binding protein 2 	ENSMUST00000108081.2|Ggnbp2|ENSMUSG00000020530.8|gametogenetin binding protein 2
mm10_v2_chr5_+_115429585_115429613	0.249429	UCACAUU	ENSMUST00000150779.1|Msi1|ENSMUSG00000054256.5|musashi RNA-binding protein 1
mm10_v2_chr15_+_54410755_54410797	0.248651	UCACAUU	ENSMUST00000036737.3|Colec10|ENSMUSG00000038591.3|collectin sub-family member 10
mm10_v2_chr19_-_44107447_44107492	0.247092	UCACAUU	ENSMUST00000119591.1|Chuk|ENSMUSG00000025199.10|conserved helix-loop-helix ubiquitous kinase 	ENSMUST00000026217.4|Chuk|ENSMUSG00000025199.10|conserved helix-loop-helix ubiquitous kinase
mm10_v2_chr10_+_74967164_74967203	0.246099	UCACAUU	ENSMUST00000037813.4|Gnaz|ENSMUSG00000040009.5|guanine nucleotide binding protein, alpha z subunit
mm10_v2_chr18_+_53862087_53862143	0.245543	UCACAUU	ENSMUST00000069597.6|Csnk1g3|ENSMUSG00000073563.2|casein kinase 1, gamma 3
mm10_v2_chr3_+_103914560_103914605	0.244964	UCACAUU	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr7_+_91090697_91090727	0.24426	UCACAUU	ENSMUST00000107196.2|Dlg2|ENSMUSG00000052572.9|discs, large homolog 2 (Drosophila)
mm10_v2_chr3_-_122619663_122619680	0.243296	UCACAUU	ENSMUST00000162409.1|Fnbp1l|ENSMUSG00000039735.9|formin binding protein 1-like
mm10_v2_chr9_-_37552904_37552982	0.242278	UCACAUU	ENSMUST00000065668.5|Nrgn|ENSMUSG00000053310.5|neurogranin
mm10_v2_chr17_+_82539258_82539258	0.242025	UCACAUU	ENSMUST00000097278.3|Gm6594|ENSMUSG00000073371.3|predicted pseudogene 6594
mm10_v2_chr11_-_80080928_80081001	0.241374	UCACAUU	ENSMUST00000103233.3|Crlf3|ENSMUSG00000017561.10|cytokine receptor-like factor 3 	ENSMUST00000061283.8|Crlf3|ENSMUSG00000017561.10|cytokine receptor-like factor 3
mm10_v2_chr8_+_79639618_79639730	0.236081	UCACAUU	ENSMUST00000173078.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4 	ENSMUST00000173286.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4
mm10_v2_chr14_-_49066653_49066674	0.232438	UCACAUU	ENSMUST00000162175.1|Exoc5|ENSMUSG00000061244.7|exocyst complex component 5
mm10_v2_chr1_-_13372434_13372457	0.224489	UCACAUU	ENSMUST00000081713.4|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr3_+_95588928_95588953	0.224486	UCACAUU	ENSMUST00000177390.1|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000098861.4|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like 	ENSMUST00000060323.5|Golph3l|ENSMUSG00000046519.9|golgi phosphoprotein 3-like
mm10_v2_chr15_+_80711292_80711340	0.22284	UCACAUU	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr2_+_29124972_29125048	0.221649	UCACAUU	ENSMUST00000061578.2|Setx|ENSMUSG00000043535.7|senataxin
mm10_v2_chr1_+_4807823_4807928	0.220059	UCACAUU	ENSMUST00000027036.4|Lypla1|ENSMUSG00000025903.8|lysophospholipase 1 	ENSMUST00000119612.2|Lypla1|ENSMUSG00000025903.8|lysophospholipase 1 	ENSMUST00000137887.1|Lypla1|ENSMUSG00000025903.8|lysophospholipase 1 	ENSMUST00000115529.1|Lypla1|ENSMUSG00000025903.8|lysophospholipase 1 	ENSMUST00000150971.1|Lypla1|ENSMUSG00000025903.8|lysophospholipase 1
mm10_v2_chr7_+_90130227_90130279	0.218764	UCACAUU	ENSMUST00000049537.7|Picalm|ENSMUSG00000039361.9|phosphatidylinositol binding clathrin assembly protein
mm10_v2_chr2_-_3475027_3475086	0.216891	UCACAUU	ENSMUST00000027956.2|Suv39h2|ENSMUSG00000026646.10|suppressor of variegation 3-9 homolog 2 (Drosophila)
mm10_v2_chr13_+_75707484_75707510	0.215513	UCACAUU	ENSMUST00000001583.6|Ell2|ENSMUSG00000001542.6|elongation factor RNA polymerase II 2
mm10_v2_chr10_-_62792243_62792368	0.212965	UCACAUU	ENSMUST00000020268.5|Ccar1|ENSMUSG00000020074.6|cell division cycle and apoptosis regulator 1
mm10_v2_chr4_+_109280266_109280315	0.211493	UCACAUU	ENSMUST00000102729.3|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr6_+_8259379_8259460	0.21126	UCACAUU	ENSMUST00000162034.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039 	ENSMUST00000160705.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039 	ENSMUST00000159433.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039
mm10_v2_chr9_+_118040475_118040499	0.210719	UCACAUU	ENSMUST00000044454.5|Azi2|ENSMUSG00000039285.6|5-azacytidine induced gene 2
mm10_v2_chr3_-_79567679_79567764	0.208887	UCACAUU	ENSMUST00000076136.4|Fnip2|ENSMUSG00000061175.5|folliculin interacting protein 2
mm10_v2_chr1_-_136346074_136346145	0.208079	UCACAUU	ENSMUST00000048309.6|Camsap2|ENSMUSG00000041570.9|calmodulin regulated spectrin-associated protein family, member 2
mm10_v2_chr19_-_59943647_59943678	0.208058	UCACAUU	ENSMUST00000171986.1|Rab11fip2|ENSMUSG00000040022.8|RAB11 family interacting protein 2 (class I)
mm10_v2_chr10_-_44458715_44458751	0.208002	UCACAUU	ENSMUST00000039174.4|Prdm1|ENSMUSG00000038151.6|PR domain containing 1, with ZNF domain
mm10_v2_chr6_+_52713729_52713800	0.20752	UCACAUU	ENSMUST00000080723.4|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1 	ENSMUST00000149588.1|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1
mm10_v2_chr10_-_53379816_53379858	0.204196	UCACAUU	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr2_+_60209887_60210073	0.202712	UCACAUU	ENSMUST00000102748.4|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7 	ENSMUST00000102747.1|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7
mm10_v2_chr14_-_61439831_61439947	0.202008	UCACAUU	ENSMUST00000022496.7|Kpna3|ENSMUSG00000021929.8|karyopherin (importin) alpha 3
mm10_v2_chr4_+_129820702_129820709	0.201677	UCACAUU	ENSMUST00000165853.1|Ptp4a2|ENSMUSG00000028788.8|protein tyrosine phosphatase 4a2
mm10_v2_chr16_-_45654083_45654118	0.201085	UCACAUU	ENSMUST00000036732.7|BC016579|ENSMUSG00000033187.7|cDNA sequence, BC016579
mm10_v2_chrX_-_111697069_111697127	0.200436	UCACAUU	ENSMUST00000113422.2|Hdx|ENSMUSG00000034551.6|highly divergent homeobox 	ENSMUST00000038472.5|Hdx|ENSMUSG00000034551.6|highly divergent homeobox
mm10_v2_chr4_+_101496648_101496722	0.20037	UCACAUU	ENSMUST00000106930.1|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6 	ENSMUST00000154120.1|Dnajc6|ENSMUSG00000028528.10|DnaJ (Hsp40) homolog, subfamily C, member 6
mm10_v2_chr14_-_45318556_45318579	0.199753	UCACAUU	ENSMUST00000022378.7|Ero1l|ENSMUSG00000021831.8|ERO1-like (S. cerevisiae)
mm10_v2_chr1_-_23383149_23383225	0.196968	UCACAUU	ENSMUST00000027343.5|Ogfrl1|ENSMUSG00000026158.5|opioid growth factor receptor-like 1
mm10_v2_chr6_+_86404219_86404240	0.195536	UCACAUU	ENSMUST00000095754.3|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000095753.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr1_+_85793411_85793541	0.193843	UCACAUU	ENSMUST00000113360.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39 	ENSMUST00000126962.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39
mm10_v2_chr18_+_42275353_42275392	0.192061	UCACAUU	ENSMUST00000046972.7|Rbm27|ENSMUSG00000024491.9|RNA binding motif protein 27 	ENSMUST00000091920.5|Rbm27|ENSMUSG00000024491.9|RNA binding motif protein 27
mm10_v2_chr3_+_61364507_61364633	0.191457	UCACAUU	ENSMUST00000049064.2|Rap2b|ENSMUSG00000036894.2|RAP2B, member of RAS oncogene family
mm10_v2_chr14_-_104522615_104522707	0.190947	UCACAUU	ENSMUST00000022716.2|Rnf219|ENSMUSG00000022120.3|ring finger protein 219
mm10_v2_chr7_-_116443439_116443462	0.190811	UCACAUU	ENSMUST00000170430.1|Pik3c2a|ENSMUSG00000030660.8|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm10_v2_chr2_-_73214409_73214447	0.189736	UCACAUU	ENSMUST00000028517.6|Ola1|ENSMUSG00000027108.9|Obg-like ATPase 1
mm10_v2_chr10_-_91082653_91082662	0.189509	UCACAUU	ENSMUST00000159110.1|Apaf1|ENSMUSG00000019979.6|apoptotic peptidase activating factor 1
mm10_v2_chr15_-_11905609_11905674	0.187661	UCACAUU	ENSMUST00000066529.3|Npr3|ENSMUSG00000022206.6|natriuretic peptide receptor 3
mm10_v2_chr18_-_34931993_34932007	0.187246	UCACAUU	ENSMUST00000025218.7|Etf1|ENSMUSG00000024360.7|eukaryotic translation termination factor 1
mm10_v2_chr11_-_86257518_86257550	0.186597	UCACAUU	ENSMUST00000136469.1|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2 	ENSMUST00000018212.6|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2
mm10_v2_chr10_-_112928974_112929026	0.186589	UCACAUU	ENSMUST00000099276.2|Atxn7l3b|ENSMUSG00000074748.2|ataxin 7-like 3B
mm10_v2_chr1_-_191575534_191575549	0.186365	UCACAUU	ENSMUST00000027933.5|Dtl|ENSMUSG00000037474.8|denticleless homolog (Drosophila)
mm10_v2_chr16_+_45224315_45224346	0.186133	UCACAUU	ENSMUST00000102802.3|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated 	ENSMUST00000063654.4|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated
mm10_v2_chr17_-_88065291_88065291	0.185721	UCACAUU	ENSMUST00000005504.8|Fbxo11|ENSMUSG00000005371.8|F-box protein 11
mm10_v2_chr11_+_77216180_77216287	0.183818	UCACAUU	ENSMUST00000037912.5|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila) 	ENSMUST00000156488.1|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila)
mm10_v2_chr6_-_131293187_131293248	0.183769	UCACAUU	ENSMUST00000032307.5|Magohb|ENSMUSG00000030188.6|mago-nashi homolog B (Drosophila)
mm10_v2_chr13_-_111490111_111490139	0.183161	UCACAUU	ENSMUST00000047627.7|Gpbp1|ENSMUSG00000032745.11|GC-rich promoter binding protein 1
mm10_v2_chr2_+_119675062_119675095	0.182659	UCACAUU	ENSMUST00000028767.8|Rtf1|ENSMUSG00000027304.9|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm10_v2_chr1_-_181842334_181842401	0.181969	UCACAUU	ENSMUST00000005003.6|Lbr|ENSMUSG00000004880.6|lamin B receptor
mm10_v2_chr12_-_64965496_64965538	0.180292	UCACAUU	ENSMUST00000021331.7|Klhl28|ENSMUSG00000020948.8|kelch-like 28
mm10_v2_chr3_+_63976106_63976135	0.178789	UCACAUU	ENSMUST00000029405.7|Gmps|ENSMUSG00000027823.8|guanine monophosphate synthetase
mm10_v2_chr5_-_51553896_51553921	0.178242	UCACAUU	ENSMUST00000132734.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm10_v2_chr13_+_83504032_83504050	0.176082	UCACAUU	ENSMUST00000163888.1|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C 	ENSMUST00000005722.7|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C
mm10_v2_chr15_+_12117813_12117846	0.174906	UCACAUU	ENSMUST00000122941.1|Zfr|ENSMUSG00000022201.9|zinc finger RNA binding protein
mm10_v2_chr3_+_68869563_68869589	0.174253	UCACAUU	ENSMUST00000054551.2|1110032F04Rik|ENSMUSG00000046999.2|RIKEN cDNA 1110032F04 gene
mm10_v2_chr6_+_97807014_97807067	0.171835	UCACAUU	ENSMUST00000043637.7|Mitf|ENSMUSG00000035158.9|microphthalmia-associated transcription factor
mm10_v2_chr9_+_110532501_110532600	0.171164	UCACAUU	ENSMUST00000153838.2|Setd2|ENSMUSG00000044791.10|SET domain containing 2
mm10_v2_chr12_-_72070991_72071079	0.170174	UCACAUU	ENSMUST00000050649.4|Gpr135|ENSMUSG00000043398.4|G protein-coupled receptor 135
mm10_v2_chr2_+_30061754_30061859	0.16988	UCACAUU	ENSMUST00000149578.1|Set|ENSMUSG00000054766.7|SET nuclear oncogene 	ENSMUST00000102866.3|Set|ENSMUSG00000054766.7|SET nuclear oncogene
mm10_v2_chr2_+_31572701_31572725	0.169872	UCACAUU	ENSMUST00000055244.6|Fubp3|ENSMUSG00000026843.9|far upstream element (FUSE) binding protein 3
mm10_v2_chr1_-_46854046_46854079	0.168978	UCACAUU	ENSMUST00000027131.4|Slc39a10|ENSMUSG00000025986.5|solute carrier family 39 (zinc transporter), member 10
mm10_v2_chr14_-_98169542_98169595	0.168964	UCACAUU	ENSMUST00000069334.7|Dach1|ENSMUSG00000055639.10|dachshund 1 (Drosophila) 	ENSMUST00000071533.6|Dach1|ENSMUSG00000055639.10|dachshund 1 (Drosophila)
mm10_v2_chr10_+_111164794_111164811	0.168388	UCACAUU	ENSMUST00000105275.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8 	ENSMUST00000095310.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8
mm10_v2_chrX_+_42149288_42149412	0.167682	UCACAUU	ENSMUST00000115073.2|Stag2|ENSMUSG00000025862.8|stromal antigen 2 	ENSMUST00000115072.1|Stag2|ENSMUSG00000025862.8|stromal antigen 2
mm10_v2_chr16_+_38089001_38089064	0.165279	UCACAUU	ENSMUST00000023507.6|Gsk3b|ENSMUSG00000022812.7|glycogen synthase kinase 3 beta
mm10_v2_chr1_-_151428440_151428474	0.164963	UCACAUU	ENSMUST00000064771.5|Swt1|ENSMUSG00000052748.8|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
mm10_v2_chr5_-_124327883_124327972	0.16479	UCACAUU	ENSMUST00000031344.6|Mphosph9|ENSMUSG00000038126.11|M-phase phosphoprotein 9
mm10_v2_chr14_-_19977249_19977253	0.160499	UCACAUU	ENSMUST00000160013.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chr5_+_67306941_67306977	0.159525	UCACAUU	ENSMUST00000162372.1|Slc30a9|ENSMUSG00000029221.9|solute carrier family 30 (zinc transporter), member 9 	ENSMUST00000113676.2|Slc30a9|ENSMUSG00000029221.9|solute carrier family 30 (zinc transporter), member 9
mm10_v2_chr12_-_59061425_59061477	0.159359	UCACAUU	ENSMUST00000021380.8|Trappc6b|ENSMUSG00000020993.8|trafficking protein particle complex 6B
mm10_v2_chr5_-_148928619_148928659	0.158927	UCACAUU	ENSMUST00000149169.1|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1 	ENSMUST00000047257.8|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1
mm10_v2_chr6_-_58907120_58907131	0.157547	UCACAUU	ENSMUST00000059539.3|Nap1l5|ENSMUSG00000055430.3|nucleosome assembly protein 1-like 5
mm10_v2_chrX_-_142966709_142966734	0.156523	UCACAUU	ENSMUST00000041317.2|Ammecr1|ENSMUSG00000042225.3|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm10_v2_chr5_-_74068361_74068438	0.156515	UCACAUU	ENSMUST00000119154.1|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46 	ENSMUST00000068058.7|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46
mm10_v2_chr8_-_72305276_72305276	0.155242	UCACAUU	ENSMUST00000075602.6|Gm10282|ENSMUSG00000070713.4|predicted pseudogene 10282
mm10_v2_chr11_+_31872100_31872226	0.154776	UCACAUU	ENSMUST00000020543.6|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4 	ENSMUST00000109412.2|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4
mm10_v2_chr9_-_97111117_97111159	0.153913	UCACAUU	ENSMUST00000085206.4|Slc25a36|ENSMUSG00000032449.7|solute carrier family 25, member 36
mm10_v2_chr4_-_108301045_108301107	0.153363	UCACAUU	ENSMUST00000043616.6|Zyg11b|ENSMUSG00000034636.9|zyg-ll family member B, cell cycle regulator
mm10_v2_chr19_+_40894692_40894736	0.153274	UCACAUU	ENSMUST00000050092.6|Zfp518a|ENSMUSG00000049164.6|zinc finger protein 518A
mm10_v2_chrX_-_133688978_133689005	0.152242	UCACAUU	ENSMUST00000149154.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19 	ENSMUST00000167944.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19
mm10_v2_chr12_+_8674129_8674150	0.151554	UCACAUU	ENSMUST00000111123.2|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000178015.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000020915.3|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila)
mm10_v2_chr3_+_98382438_98382520	0.150697	UCACAUU	ENSMUST00000056096.8|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chr2_-_116065798_116065853	0.149251	UCACAUU	ENSMUST00000110907.1|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000110908.2|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr1_-_178337774_178337797	0.148392	UCACAUU	ENSMUST00000037748.7|Hnrnpu|ENSMUSG00000039630.8|heterogeneous nuclear ribonucleoprotein U
mm10_v2_chr7_-_65371210_65371287	0.146159	UCACAUU	ENSMUST00000102592.3|Tjp1|ENSMUSG00000030516.8|tight junction protein 1
mm10_v2_chr11_+_43682038_43682060	0.145457	UCACAUU	ENSMUST00000094294.4|Pwwp2a|ENSMUSG00000044950.7|PWWP domain containing 2A
mm10_v2_chr6_-_51469869_51469894	0.145087	UCACAUU	ENSMUST00000114459.1|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1 	ENSMUST00000069949.6|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1
mm10_v2_chr18_-_46597480_46597543	0.144776	UCACAUU	ENSMUST00000151189.1|Tmed7|ENSMUSG00000033184.8|transmembrane emp24 protein transport domain containing 7
mm10_v2_chr9_+_101074727_101074727	0.143695	UCACAUU	ENSMUST00000085177.3|Msl2|ENSMUSG00000066415.3|male-specific lethal 2 homolog (Drosophila)
mm10_v2_chr3_+_16183177_16183206	0.143042	UCACAUU	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr13_-_52530827_52530841	0.142724	UCACAUU	ENSMUST00000057442.6|Diras2|ENSMUSG00000047842.6|DIRAS family, GTP-binding RAS-like 2
mm10_v2_chr3_-_116662643_116662677	0.141652	UCACAUU	ENSMUST00000029570.5|Hiat1|ENSMUSG00000089911.1|hippocampus abundant gene transcript 1
mm10_v2_chr13_+_49341549_49341623	0.13935	UCACAUU	ENSMUST00000110084.2|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000048544.6|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000110085.3|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila)
mm10_v2_chr17_-_25015230_25015230	0.135569	UCACAUU	ENSMUST00000073337.6|Cramp1l|ENSMUSG00000038002.8|Crm, cramped-like (Drosophila)
mm10_v2_chr16_-_22163299_22163299	0.135366	UCACAUU	ENSMUST00000100052.4|Igf2bp2|ENSMUSG00000033581.10|insulin-like growth factor 2 mRNA binding protein 2
mm10_v2_chr5_-_92675125_92675145	0.134615	UCACAUU	ENSMUST00000060930.3|Ccdc158|ENSMUSG00000050050.10|coiled-coil domain containing 158
mm10_v2_chr7_+_66109474_66109515	0.134591	UCACAUU	ENSMUST00000036372.6|Chsy1|ENSMUSG00000032640.9|chondroitin sulfate synthase 1
mm10_v2_chr5_+_32611171_32611245	0.133324	UCACAUU	ENSMUST00000072311.6|Yes1|ENSMUSG00000014932.9|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1 	ENSMUST00000168707.2|Yes1|ENSMUSG00000014932.9|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1
mm10_v2_chr5_-_32854185_32854256	0.132464	UCACAUU	ENSMUST00000130134.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like 	ENSMUST00000120129.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like
mm10_v2_chr14_-_105896819_105896819	0.131198	UCACAUU	ENSMUST00000022709.4|Spry2|ENSMUSG00000022114.4|sprouty homolog 2 (Drosophila)
mm10_v2_chr3_+_41555723_41555745	0.130717	UCACAUU	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr17_+_47630690_47630690	0.130355	UCACAUU	ENSMUST00000024779.8|Usp49|ENSMUSG00000090115.1|ubiquitin specific peptidase 49
mm10_v2_chr17_-_64331817_64331957	0.129604	UCACAUU	ENSMUST00000172733.1|Pja2|ENSMUSG00000024083.9|praja 2, RING-H2 motif containing 	ENSMUST00000172818.1|Pja2|ENSMUSG00000024083.9|praja 2, RING-H2 motif containing
mm10_v2_chr5_-_20951769_20951824	0.12907	UCACAUU	ENSMUST00000036489.5|Rsbn1l|ENSMUSG00000039968.5|round spermatid basic protein 1-like
mm10_v2_chr6_-_53820764_53820837	0.128848	UCACAUU	ENSMUST00000127748.2|Tril|ENSMUSG00000043496.5|TLR4 interactor with leucine-rich repeats
mm10_v2_chr11_-_97280626_97280650	0.128718	UCACAUU	ENSMUST00000001480.7|Npepps|ENSMUSG00000001441.7|aminopeptidase puromycin sensitive
mm10_v2_chr10_-_19015347_19015410	0.126648	UCACAUU	ENSMUST00000019997.4|Tnfaip3|ENSMUSG00000019850.5|tumor necrosis factor, alpha-induced protein 3
mm10_v2_chr2_-_13011747_13011778	0.126085	UCACAUU	ENSMUST00000061545.5|C1ql3|ENSMUSG00000049630.5|C1q-like 3
mm10_v2_chr11_+_67200052_67200111	0.125466	UCACAUU	ENSMUST00000124516.1|Myh1|ENSMUSG00000056328.8|myosin, heavy polypeptide 1, skeletal muscle, adult 	ENSMUST00000018637.8|Myh1|ENSMUSG00000056328.8|myosin, heavy polypeptide 1, skeletal muscle, adult
mm10_v2_chr10_+_62980233_62980262	0.12518	UCACAUU	ENSMUST00000131718.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2 	ENSMUST00000119567.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2 	ENSMUST00000122231.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2
mm10_v2_chr9_-_52168111_52168111	0.12432	UCACAUU	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chrX_-_157492280_157492340	0.123403	UCACAUU	ENSMUST00000112529.1|Sms|ENSMUSG00000071708.5|spermine synthase
mm10_v2_chr1_-_155972887_155972890	0.123103	UCACAUU	ENSMUST00000138762.1|Cep350|ENSMUSG00000033671.11|centrosomal protein 350 	ENSMUST00000124495.1|Cep350|ENSMUSG00000033671.11|centrosomal protein 350
mm10_v2_chr1_+_23761926_23761999	0.123087	UCACAUU	ENSMUST00000063663.5|B3gat2|ENSMUSG00000026156.8|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
mm10_v2_chr2_+_154436437_154436535	0.121396	UCACAUU	ENSMUST00000109725.1|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000099178.3|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000045270.8|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000109724.1|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm10_v2_chr2_-_75704535_75704641	0.120654	UCACAUU	ENSMUST00000102672.4|Nfe2l2|ENSMUSG00000015839.6|nuclear factor, erythroid derived 2, like 2
mm10_v2_chr16_+_65815508_65815633	0.120328	UCACAUU	ENSMUST00000168064.1|Vgll3|ENSMUSG00000091243.1|vestigial like 3 (Drosophila)
mm10_v2_chr3_-_9004686_9004750	0.120309	UCACAUU	ENSMUST00000120143.1|Tpd52|ENSMUSG00000027506.9|tumor protein D52
mm10_v2_chr8_+_35587780_35587825	0.119289	UCACAUU	ENSMUST00000037666.5|Mfhas1|ENSMUSG00000070056.5|malignant fibrous histiocytoma amplified sequence 1
mm10_v2_chr18_+_36560581_36560620	0.115521	UCACAUU	ENSMUST00000155329.2|Ankhd1|ENSMUSG00000024483.12|ankyrin repeat and KH domain containing 1
mm10_v2_chr4_+_8691303_8691380	0.114577	UCACAUU	ENSMUST00000051558.3|Chd7|ENSMUSG00000041235.5|chromodomain helicase DNA binding protein 7
mm10_v2_chr6_-_3968357_3968381	0.114473	UCACAUU	ENSMUST00000031674.8|Tfpi2|ENSMUSG00000029664.8|tissue factor pathway inhibitor 2
mm10_v2_chr6_-_129451906_129452000	0.114145	UCACAUU	ENSMUST00000037481.7|Clec1a|ENSMUSG00000033082.8|C-type lectin domain family 1, member a
mm10_v2_chr2_+_14074091_14074146	0.114077	UCACAUU	ENSMUST00000102960.4|Stam|ENSMUSG00000026718.11|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
mm10_v2_chr18_-_58209926_58210067	0.112223	UCACAUU	ENSMUST00000025497.6|Fbn2|ENSMUSG00000024598.8|fibrillin 2
mm10_v2_chr11_+_3202612_3202663	0.111774	UCACAUU	ENSMUST00000110049.1|Eif4enif1|ENSMUSG00000020454.11|eukaryotic translation initiation factor 4E nuclear import factor 1
mm10_v2_chr10_-_13324160_13324242	0.111115	UCACAUU	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr18_+_7869159_7869209	0.110526	UCACAUU	ENSMUST00000170932.1|Wac|ENSMUSG00000024283.8|WW domain containing adaptor with coiled-coil 	ENSMUST00000167020.1|Wac|ENSMUSG00000024283.8|WW domain containing adaptor with coiled-coil
mm10_v2_chr16_-_91011093_91011113	0.110495	UCACAUU	ENSMUST00000170853.1|Synj1|ENSMUSG00000022973.11|synaptojanin 1 	ENSMUST00000118390.2|Synj1|ENSMUSG00000022973.11|synaptojanin 1
mm10_v2_chr15_-_51991679_51991760	0.110136	UCACAUU	ENSMUST00000022927.9|Rad21|ENSMUSG00000022314.9|RAD21 homolog (S. pombe)
mm10_v2_chr11_-_106788486_106788532	0.109269	UCACAUU	ENSMUST00000021062.5|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr15_-_66831625_66831668	0.108317	UCACAUU	ENSMUST00000164163.1|Sla|ENSMUSG00000022372.8|src-like adaptor
mm10_v2_chr8_+_82863351_82863397	0.108285	UCACAUU	ENSMUST00000078525.5|Rnf150|ENSMUSG00000047747.9|ring finger protein 150
mm10_v2_chr2_+_129592914_129592940	0.107222	UCACAUU	ENSMUST00000103203.1|Sirpa|ENSMUSG00000037902.12|signal-regulatory protein alpha
mm10_v2_chr1_-_186705980_186705999	0.106425	UCACAUU	ENSMUST00000045288.8|Tgfb2|ENSMUSG00000039239.9|transforming growth factor, beta 2
mm10_v2_chrX_+_137049586_137049654	0.105934	UCACAUU	ENSMUST00000047852.7|Fam199x|ENSMUSG00000042595.7|family with sequence similarity 199, X-linked
mm10_v2_chr6_-_39725448_39725478	0.105389	UCACAUU	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr12_-_31499541_31499616	0.104526	UCACAUU	ENSMUST00000101499.3|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000064240.6|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000085487.5|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1
mm10_v2_chr8_+_60632856_60632905	0.103553	UCACAUU	ENSMUST00000160719.1|Mfap3l|ENSMUSG00000031647.4|microfibrillar-associated protein 3-like
mm10_v2_chr17_-_27623441_27623495	0.102389	UCACAUU	ENSMUST00000025050.5|Nudt3|ENSMUSG00000024213.7|nudix (nucleotide diphosphate linked moiety X)-type motif 3
mm10_v2_chr7_-_121707253_121707460	0.102113	UCACAUU	ENSMUST00000046929.6|Usp31|ENSMUSG00000063317.6|ubiquitin specific peptidase 31
mm10_v2_chr17_+_34039437_34039481	0.10126	UCACAUU	ENSMUST00000131134.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000087497.4|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000114255.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000114252.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2
mm10_v2_chr18_-_10610124_10610144	0.100545	UCACAUU	ENSMUST00000097670.3|Esco1|ENSMUSG00000024293.9|establishment of cohesion 1 homolog 1 (S. cerevisiae)
mm10_v2_chr7_+_128744870_128745020	0.10022	UCACAUU	ENSMUST00000042942.8|Sec23ip|ENSMUSG00000055319.7|Sec23 interacting protein
mm10_v2_chr10_+_70440844_70440937	0.0985445	UCACAUU	ENSMUST00000173042.1|Fam13c|ENSMUSG00000043259.8|family with sequence similarity 13, member C 	ENSMUST00000062883.6|Fam13c|ENSMUSG00000043259.8|family with sequence similarity 13, member C
mm10_v2_chr9_-_102626095_102626147	0.097615	UCACAUU	ENSMUST00000093791.3|Cep63|ENSMUSG00000032534.10|centrosomal protein 63
mm10_v2_chr8_-_87804411_87804463	0.0966126	UCACAUU	ENSMUST00000165770.2|Zfp423|ENSMUSG00000045333.9|zinc finger protein 423
mm10_v2_chr10_-_120979327_120979373	0.0945718	UCACAUU	ENSMUST00000119944.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3 	ENSMUST00000119093.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3
mm10_v2_chr11_+_52764634_52764693	0.0945059	UCACAUU	ENSMUST00000036796.7|Fstl4|ENSMUSG00000036264.9|follistatin-like 4
mm10_v2_chr5_-_52669677_52669729	0.0943074	UCACAUU	ENSMUST00000031069.6|Sepsecs|ENSMUSG00000029173.6|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
mm10_v2_chr16_+_35983307_35983395	0.0938707	UCACAUU	ENSMUST00000004054.6|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr6_-_100287441_100287465	0.0924213	UCACAUU	ENSMUST00000101118.2|Rybp|ENSMUSG00000072872.2|RING1 and YY1 binding protein
mm10_v2_chr2_+_96318014_96318216	0.0918345	UCACAUU	ENSMUST00000135431.1|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C 	ENSMUST00000162807.2|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C
mm10_v2_chr12_-_4477138_4477196	0.0914603	UCACAUU	ENSMUST00000085814.3|Ncoa1|ENSMUSG00000020647.9|nuclear receptor coactivator 1
mm10_v2_chrX_+_138914422_138914438	0.0909351	UCACAUU	ENSMUST00000064937.7|Nrk|ENSMUSG00000052854.9|Nik related kinase 	ENSMUST00000113052.1|Nrk|ENSMUSG00000052854.9|Nik related kinase
mm10_v2_chr2_+_127363197_127363217	0.09072	UCACAUU	ENSMUST00000104934.1|Adra2b|ENSMUSG00000058620.5|adrenergic receptor, alpha 2b
mm10_v2_chr10_+_79988584_79988683	0.0894314	UCACAUU	ENSMUST00000004784.4|Cnn2|ENSMUSG00000004665.4|calponin 2 	ENSMUST00000105374.1|Cnn2|ENSMUSG00000004665.4|calponin 2
mm10_v2_chr10_+_95940663_95940703	0.0887899	UCACAUU	ENSMUST00000053484.6|Eea1|ENSMUSG00000036499.8|early endosome antigen 1
mm10_v2_chr9_+_65908967_65909020	0.0884221	UCACAUU	ENSMUST00000034949.3|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1 	ENSMUST00000154589.1|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1
mm10_v2_chr18_-_88894322_88894371	0.0876454	UCACAUU	ENSMUST00000070116.5|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6 	ENSMUST00000125362.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr10_-_7956223_7956271	0.0871105	UCACAUU	ENSMUST00000146444.1|Tab2|ENSMUSG00000015755.10|TGF-beta activated kinase 1/MAP3K7 binding protein 2
mm10_v2_chr3_-_84582476_84582534	0.086058	UCACAUU	ENSMUST00000107687.2|Arfip1|ENSMUSG00000074513.3|ADP-ribosylation factor interacting protein 1 	ENSMUST00000098990.3|Arfip1|ENSMUSG00000074513.3|ADP-ribosylation factor interacting protein 1
mm10_v2_chr13_-_112652295_112652355	0.0855404	UCACAUU	ENSMUST00000099166.2|Ddx4|ENSMUSG00000021758.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 	ENSMUST00000075748.5|Ddx4|ENSMUSG00000021758.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
mm10_v2_chr2_-_37647199_37647285	0.0855106	UCACAUU	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr9_+_7184514_7184567	0.0852085	UCACAUU	ENSMUST00000034499.8|Dcun1d5|ENSMUSG00000032002.9|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)
mm10_v2_chr18_+_56707725_56707940	0.0847602	UCACAUU	ENSMUST00000025486.8|Lmnb1|ENSMUSG00000024590.8|lamin B1
mm10_v2_chr10_+_70097102_70097211	0.0847459	UCACAUU	ENSMUST00000147545.1|Ccdc6|ENSMUSG00000048701.7|coiled-coil domain containing 6
mm10_v2_chr3_-_125938537_125938605	0.0823549	UCACAUU	ENSMUST00000057944.7|Ugt8a|ENSMUSG00000032854.8|UDP galactosyltransferase 8A
mm10_v2_chr6_+_17463749_17463809	0.0821448	UCACAUU	ENSMUST00000115443.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr12_-_104751900_104751952	0.0820157	UCACAUU	ENSMUST00000041987.6|Dicer1|ENSMUSG00000041415.9|dicer 1, ribonuclease type III
mm10_v2_chr7_-_116038734_116038750	0.0819712	UCACAUU	ENSMUST00000166877.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr18_+_59175333_59175406	0.0808937	UCACAUU	ENSMUST00000080721.4|Chsy3|ENSMUSG00000058152.7|chondroitin sulfate synthase 3
mm10_v2_chr13_-_17805093_17805189	0.0802504	UCACAUU	ENSMUST00000042365.7|Cdk13|ENSMUSG00000041297.7|cyclin-dependent kinase 13
mm10_v2_chrX_-_147554050_147554087	0.0791803	UCACAUU	ENSMUST00000112819.2|Lrch2|ENSMUSG00000031290.8|leucine-rich repeats and calponin homology (CH) domain containing 2 	ENSMUST00000136789.1|Lrch2|ENSMUSG00000031290.8|leucine-rich repeats and calponin homology (CH) domain containing 2
mm10_v2_chr1_+_72284367_72284419	0.0789578	UCACAUU	ENSMUST00000027380.5|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169 	ENSMUST00000141783.1|Tmem169|ENSMUSG00000026188.5|transmembrane protein 169
mm10_v2_chrX_+_36328353_36328418	0.0788732	UCACAUU	ENSMUST00000016383.3|Lonrf3|ENSMUSG00000016239.5|LON peptidase N-terminal domain and ring finger 3
mm10_v2_chr5_+_103754154_103754188	0.0787964	UCACAUU	ENSMUST00000054979.3|Aff1|ENSMUSG00000029313.12|AF4/FMR2 family, member 1
mm10_v2_chr3_-_86548268_86548290	0.0760399	UCACAUU	ENSMUST00000077524.3|Mab21l2|ENSMUSG00000057777.3|mab-21-like 2 (C. elegans)
mm10_v2_chr15_-_64312636_64312692	0.0758223	UCACAUU	ENSMUST00000177083.1|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000177371.1|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm10_v2_chr1_+_57377593_57377689	0.0753788	UCACAUU	ENSMUST00000042734.2|1700066M21Rik|ENSMUSG00000038323.2|RIKEN cDNA 1700066M21 gene
mm10_v2_chr16_+_14705832_14705858	0.0752889	UCACAUU	ENSMUST00000023356.6|Snai2|ENSMUSG00000022676.6|snail homolog 2 (Drosophila)
mm10_v2_chr10_-_115384388_115384435	0.0751749	UCACAUU	ENSMUST00000020346.4|Thap2|ENSMUSG00000020137.4|THAP domain containing, apoptosis associated protein 2
mm10_v2_chr7_+_132859225_132859266	0.0747902	UCACAUU	ENSMUST00000084497.5|Fam175b|ENSMUSG00000030965.12|family with sequence similarity 175, member B 	ENSMUST00000181577.1|Fam175b|ENSMUSG00000030965.12|family with sequence similarity 175, member B 	ENSMUST00000106161.1|Fam175b|ENSMUSG00000030965.12|family with sequence similarity 175, member B
mm10_v2_chr10_+_52417532_52417580	0.0737907	UCACAUU	ENSMUST00000023830.8|Nus1|ENSMUSG00000023068.8|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
mm10_v2_chr16_-_4213404_4213404	0.0728928	UCACAUU	ENSMUST00000023165.6|Crebbp|ENSMUSG00000022521.8|CREB binding protein
mm10_v2_chr10_+_56377300_56377338	0.0720674	UCACAUU	ENSMUST00000068581.7|Gja1|ENSMUSG00000050953.9|gap junction protein, alpha 1
mm10_v2_chr16_+_31663935_31664039	0.0712123	UCACAUU	ENSMUST00000100001.3|Dlg1|ENSMUSG00000022770.10|discs, large homolog 1 (Drosophila) 	ENSMUST00000064477.7|Dlg1|ENSMUSG00000022770.10|discs, large homolog 1 (Drosophila)
mm10_v2_chr11_-_85235065_85235137	0.0708987	UCACAUU	ENSMUST00000018625.9|Appbp2|ENSMUSG00000018481.9|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm10_v2_chr9_-_99140065_99140087	0.0699262	UCACAUU	ENSMUST00000035037.7|Pik3cb|ENSMUSG00000032462.8|phosphatidylinositol 3-kinase, catalytic, beta polypeptide
mm10_v2_chr5_+_33820695_33820835	0.0687913	UCACAUU	ENSMUST00000075812.4|Whsc1|ENSMUSG00000057406.10|Wolf-Hirschhorn syndrome candidate 1 (human) 	ENSMUST00000114397.2|Whsc1|ENSMUSG00000057406.10|Wolf-Hirschhorn syndrome candidate 1 (human) 	ENSMUST00000155880.1|Whsc1|ENSMUSG00000057406.10|Wolf-Hirschhorn syndrome candidate 1 (human)
mm10_v2_chr6_-_28831747_28831747	0.068381	UCACAUU	ENSMUST00000062304.5|Lrrc4|ENSMUSG00000049939.5|leucine rich repeat containing 4
mm10_v2_chr4_+_59626189_59626253	0.0674997	UCACAUU	ENSMUST00000070150.4|E130308A19Rik|ENSMUSG00000045071.7|RIKEN cDNA E130308A19 gene 	ENSMUST00000052420.6|E130308A19Rik|ENSMUSG00000045071.7|RIKEN cDNA E130308A19 gene
mm10_v2_chr4_+_53826014_53826107	0.0669657	UCACAUU	ENSMUST00000030127.6|Tmem38b|ENSMUSG00000028420.7|transmembrane protein 38B
mm10_v2_chr13_-_99516537_99516602	0.0666769	UCACAUU	ENSMUST00000064762.4|Map1b|ENSMUSG00000052727.5|microtubule-associated protein 1B
mm10_v2_chr10_+_45289305_45289430	0.0666683	UCACAUU	ENSMUST00000019994.7|Popdc3|ENSMUSG00000019848.8|popeye domain containing 3 	ENSMUST00000161803.1|Popdc3|ENSMUSG00000019848.8|popeye domain containing 3
mm10_v2_chr1_-_63114516_63114667	0.0666568	UCACAUU	ENSMUST00000097718.2|Ino80d|ENSMUSG00000040865.9|INO80 complex subunit D
mm10_v2_chr2_+_152226839_152226908	0.0664791	UCACAUU	ENSMUST00000099224.3|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000124791.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000133119.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide
mm10_v2_chr5_-_114823460_114823475	0.0641984	UCACAUU	ENSMUST00000140374.1|Gm20499|ENSMUSG00000092252.1|predicted gene 20499 	ENSMUST00000100850.4|2610524H06Rik|ENSMUSG00000092486.1|RIKEN cDNA 2610524H06 gene
mm10_v2_chr4_-_129742275_129742312	0.0635807	UCACAUU	ENSMUST00000066257.5|Khdrbs1|ENSMUSG00000028790.7|KH domain containing, RNA binding, signal transduction associated 1
mm10_v2_chr4_+_53779694_53779706	0.0635679	UCACAUU	ENSMUST00000030124.3|Tal2|ENSMUSG00000028417.3|T cell acute lymphocytic leukemia 2
mm10_v2_chr6_+_119479668_119479795	0.0616594	UCACAUU	ENSMUST00000032094.5|Fbxl14|ENSMUSG00000030019.5|F-box and leucine-rich repeat protein 14
mm10_v2_chr6_+_54816906_54816920	0.060422	UCACAUU	ENSMUST00000079869.6|Znrf2|ENSMUSG00000058446.8|zinc and ring finger 2
mm10_v2_chr8_+_95703037_95703063	0.0602451	UCACAUU	ENSMUST00000073139.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4 	ENSMUST00000080666.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4
mm10_v2_chr10_+_93160824_93160894	0.0602018	UCACAUU	ENSMUST00000069965.7|Cdk17|ENSMUSG00000020015.9|cyclin-dependent kinase 17
mm10_v2_chr19_+_53529100_53529109	0.0599657	UCACAUU	ENSMUST00000038287.6|Dusp5|ENSMUSG00000034765.6|dual specificity phosphatase 5
mm10_v2_chr16_-_96082389_96082481	0.0596199	UCACAUU	ENSMUST00000099502.2|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000023631.8|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000113829.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000153398.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1
mm10_v2_chr5_-_44799643_44799707	0.0592536	UCACAUU	ENSMUST00000070748.5|Ldb2|ENSMUSG00000039706.7|LIM domain binding 2
mm10_v2_chrX_+_101254528_101254574	0.0591758	UCACAUU	ENSMUST00000062000.4|Foxo4|ENSMUSG00000042903.7|forkhead box O4
mm10_v2_chr13_+_41606216_41606216	0.0568862	UCACAUU	ENSMUST00000129449.1|Tmem170b|ENSMUSG00000087370.2|transmembrane protein 170B
mm10_v2_chr1_+_191717834_191717904	0.0560576	UCACAUU	ENSMUST00000110855.1|Lpgat1|ENSMUSG00000026623.10|lysophosphatidylglycerol acyltransferase 1 	ENSMUST00000133076.1|Lpgat1|ENSMUSG00000026623.10|lysophosphatidylglycerol acyltransferase 1
mm10_v2_chr6_-_148831448_148831494	0.0551979	UCACAUU	ENSMUST00000048418.7|Ipo8|ENSMUSG00000040029.8|importin 8
mm10_v2_chr4_-_99120898_99120935	0.0551623	UCACAUU	ENSMUST00000075836.5|Dock7|ENSMUSG00000028556.9|dedicator of cytokinesis 7
mm10_v2_chr3_+_59006978_59006978	0.05502	UCACAUU	ENSMUST00000040325.7|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000164225.1|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000040846.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000029393.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like
mm10_v2_chr3_-_69127098_69127113	0.0544822	UCACAUU	ENSMUST00000029353.2|Kpna4|ENSMUSG00000027782.4|karyopherin (importin) alpha 4
mm10_v2_chr12_-_14152038_14152069	0.0540664	UCACAUU	ENSMUST00000020926.6|Fam84a|ENSMUSG00000020607.6|family with sequence similarity 84, member A
mm10_v2_chr10_-_37138863_37138937	0.05306	UCACAUU	ENSMUST00000092584.5|Marcks|ENSMUSG00000069662.5|myristoylated alanine rich protein kinase C substrate
mm10_v2_chr1_+_17601893_17601913	0.0520299	UCACAUU	ENSMUST00000088476.2|Pi15|ENSMUSG00000067780.2|peptidase inhibitor 15
mm10_v2_chr4_+_48124903_48124938	0.0515931	UCACAUU	ENSMUST00000107721.1|Stx17|ENSMUSG00000061455.7|syntaxin 17 	ENSMUST00000153502.1|Stx17|ENSMUSG00000061455.7|syntaxin 17 	ENSMUST00000107720.2|Stx17|ENSMUSG00000061455.7|syntaxin 17 	ENSMUST00000064765.4|Stx17|ENSMUSG00000061455.7|syntaxin 17
mm10_v2_chr11_+_105589970_105590028	0.0506057	UCACAUU	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chr15_-_10713537_10713544	0.0498331	UCACAUU	ENSMUST00000090339.3|Rai14|ENSMUSG00000022246.7|retinoic acid induced 14
mm10_v2_chr17_+_8801742_8801751	0.0497285	UCACAUU	ENSMUST00000089085.2|Pde10a|ENSMUSG00000023868.9|phosphodiesterase 10A
mm10_v2_chr15_-_98871175_98871204	0.0490675	UCACAUU	ENSMUST00000178486.2|Kmt2d|ENSMUSG00000048154.10|lysine (K)-specific methyltransferase 2D 	ENSMUST00000023741.9|Kmt2d|ENSMUSG00000048154.10|lysine (K)-specific methyltransferase 2D
mm10_v2_chr8_-_115707778_115707794	0.0484853	UCACAUU	ENSMUST00000109104.1|Maf|ENSMUSG00000055435.6|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm10_v2_chr2_-_144270852_144270906	0.0483097	UCACAUU	ENSMUST00000110030.3|Snx5|ENSMUSG00000027423.9|sorting nexin 5
mm10_v2_chr3_+_96181151_96181167	0.0477324	UCACAUU	ENSMUST00000035371.8|Sv2a|ENSMUSG00000038486.8|synaptic vesicle glycoprotein 2 a
mm10_v2_chr19_+_56397100_56397157	0.0474403	UCACAUU	ENSMUST00000026062.9|Casp7|ENSMUSG00000025076.9|caspase 7
mm10_v2_chr2_+_37516618_37516634	0.0473166	UCACAUU	ENSMUST00000065441.6|Gpr21|ENSMUSG00000053164.6|G protein-coupled receptor 21
mm10_v2_chr10_-_40142247_40142260	0.0472034	UCACAUU	ENSMUST00000092566.6|Slc16a10|ENSMUSG00000019838.10|solute carrier family 16 (monocarboxylic acid transporters), member 10
mm10_v2_chr6_+_86849488_86849628	0.0470423	UCACAUU	ENSMUST00000089519.6|Aak1|ENSMUSG00000057230.7|AP2 associated kinase 1 	ENSMUST00000113668.1|Aak1|ENSMUSG00000057230.7|AP2 associated kinase 1
mm10_v2_chr4_+_133130505_133130590	0.0468422	UCACAUU	ENSMUST00000084241.5|Wasf2|ENSMUSG00000028868.7|WAS protein family, member 2 	ENSMUST00000138831.1|Wasf2|ENSMUSG00000028868.7|WAS protein family, member 2
mm10_v2_chr5_-_114813943_114813976	0.0466333	UCACAUU	ENSMUST00000061251.5|1500011B03Rik|ENSMUSG00000072694.7|RIKEN cDNA 1500011B03 gene 	ENSMUST00000112160.3|1500011B03Rik|ENSMUSG00000072694.7|RIKEN cDNA 1500011B03 gene
mm10_v2_chr11_-_51756378_51756618	0.0460218	UCACAUU	ENSMUST00000109092.1|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000064297.4|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000109097.2|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae)
mm10_v2_chr2_-_153529941_153529985	0.0458234	UCACAUU	ENSMUST00000035346.7|8430427H17Rik|ENSMUSG00000061411.6|RIKEN cDNA 8430427H17 gene
mm10_v2_chr1_-_16519284_16519336	0.045262	UCACAUU	ENSMUST00000162751.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000027052.6|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000149320.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr14_-_122465677_122465677	0.0451301	UCACAUU	ENSMUST00000039118.6|Zic5|ENSMUSG00000041703.7|zinc finger protein of the cerebellum 5
mm10_v2_chr4_-_129189512_129189594	0.0448061	UCACAUU	ENSMUST00000117965.1|S100pbp|ENSMUSG00000040928.9|S100P binding protein 	ENSMUST00000106061.2|S100pbp|ENSMUSG00000040928.9|S100P binding protein 	ENSMUST00000072431.6|S100pbp|ENSMUSG00000040928.9|S100P binding protein
mm10_v2_chr1_+_89454769_89454885	0.0439869	UCACAUU	ENSMUST00000027521.8|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 	ENSMUST00000074945.5|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm10_v2_chr7_+_36698002_36698118	0.0429613	UCACAUU	ENSMUST00000021641.6|Tshz3|ENSMUSG00000021217.6|teashirt zinc finger family member 3
mm10_v2_chr16_-_50432340_50432409	0.0428659	UCACAUU	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr9_+_80165013_80165055	0.0428208	UCACAUU	ENSMUST00000035889.8|Myo6|ENSMUSG00000033577.12|myosin VI 	ENSMUST00000113268.1|Myo6|ENSMUSG00000033577.12|myosin VI
mm10_v2_chr1_-_165934900_165935036	0.0419073	UCACAUU	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr12_+_56695628_56695700	0.0418992	UCACAUU	ENSMUST00000001538.9|Pax9|ENSMUSG00000001497.12|paired box gene 9
mm10_v2_chr10_-_4388037_4388108	0.0410069	UCACAUU	ENSMUST00000100078.2|Zbtb2|ENSMUSG00000075327.3|zinc finger and BTB domain containing 2
mm10_v2_chr1_+_130717320_130717333	0.0409935	UCACAUU	ENSMUST00000049813.4|Yod1|ENSMUSG00000046404.4|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)
mm10_v2_chr14_+_119138415_119138415	0.0400699	UCACAUU	ENSMUST00000065904.3|Hs6st3|ENSMUSG00000053465.5|heparan sulfate 6-O-sulfotransferase 3
mm10_v2_chr2_-_181592733_181592803	0.0400686	UCACAUU	ENSMUST00000108789.2|Znf512b|ENSMUSG00000000823.10|zinc finger protein 512B 	ENSMUST00000153998.1|Znf512b|ENSMUSG00000000823.10|zinc finger protein 512B
mm10_v2_chr1_-_17097839_17097889	0.0390885	UCACAUU	ENSMUST00000038382.4|Jph1|ENSMUSG00000042686.4|junctophilin 1
mm10_v2_chr12_+_110850273_110850302	0.0377101	UCACAUU	ENSMUST00000170060.2|Zfp839|ENSMUSG00000021271.4|zinc finger protein 839
mm10_v2_chr12_+_111039334_111039400	0.0372167	UCACAUU	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr18_+_4634912_4634974	0.0369909	UCACAUU	ENSMUST00000037029.5|9430020K01Rik|ENSMUSG00000033960.5|RIKEN cDNA 9430020K01 gene
mm10_v2_chr3_+_142530329_142530386	0.0363755	UCACAUU	ENSMUST00000171263.1|Gbp7|ENSMUSG00000040253.9|guanylate binding protein 7 	ENSMUST00000045097.9|Gbp7|ENSMUSG00000040253.9|guanylate binding protein 7
mm10_v2_chr7_-_144939823_144939869	0.0360995	UCACAUU	ENSMUST00000093962.4|Ccnd1|ENSMUSG00000070348.4|cyclin D1
mm10_v2_chr12_-_56535047_56535106	0.0355915	UCACAUU	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr19_-_41848076_41848132	0.0354098	UCACAUU	ENSMUST00000059231.2|Frat2|ENSMUSG00000047604.2|frequently rearranged in advanced T cell lymphomas 2
mm10_v2_chr5_-_52190484_52190524	0.0352756	UCACAUU	ENSMUST00000031061.7|Dhx15|ENSMUSG00000029169.7|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm10_v2_chr2_+_90940397_90940543	0.0352636	UCACAUU	ENSMUST00000068726.6|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000005643.7|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000177642.1|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000111451.3|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000068747.7|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1
mm10_v2_chr9_+_65141154_65141198	0.0332813	UCACAUU	ENSMUST00000034961.4|Igdcc3|ENSMUSG00000032394.5|immunoglobulin superfamily, DCC subclass, member 3
mm10_v2_chr19_+_54045182_54045244	0.0326081	UCACAUU	ENSMUST00000036700.5|Adra2a|ENSMUSG00000033717.5|adrenergic receptor, alpha 2a
mm10_v2_chr7_-_118995211_118995219	0.0317223	UCACAUU	ENSMUST00000008878.8|Gprc5b|ENSMUSG00000008734.8|G protein-coupled receptor, family C, group 5, member B
mm10_v2_chr13_+_9276477_9276620	0.0310571	UCACAUU	ENSMUST00000174552.1|Dip2c|ENSMUSG00000048264.9|DIP2 disco-interacting protein 2 homolog C (Drosophila)
mm10_v2_chr19_-_58860975_58860997	0.0304067	UCACAUU	ENSMUST00000066285.4|Hspa12a|ENSMUSG00000025092.6|heat shock protein 12A
mm10_v2_chr8_-_47675130_47675165	0.030377	UCACAUU	ENSMUST00000080353.2|Ing2|ENSMUSG00000063049.4|inhibitor of growth family, member 2
mm10_v2_chr5_-_23616528_23616597	0.0300256	UCACAUU	ENSMUST00000088392.4|Srpk2|ENSMUSG00000062604.7|serine/arginine-rich protein specific kinase 2
mm10_v2_chr10_+_71347736_71347763	0.0299556	UCACAUU	ENSMUST00000079252.6|Ipmk|ENSMUSG00000060733.7|inositol polyphosphate multikinase
mm10_v2_chr9_-_32541589_32541602	0.0296056	UCACAUU	ENSMUST00000016231.7|Fli1|ENSMUSG00000016087.7|Friend leukemia integration 1
mm10_v2_chr14_-_64949838_64949886	0.027223	UCACAUU	ENSMUST00000067843.3|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176489.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175905.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000022544.7|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175744.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176128.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1
mm10_v2_chr14_-_70159433_70159502	0.0233394	UCACAUU	ENSMUST00000058240.7|9930012K11Rik|ENSMUSG00000044551.7|RIKEN cDNA 9930012K11 gene 	ENSMUST00000153871.1|9930012K11Rik|ENSMUSG00000044551.7|RIKEN cDNA 9930012K11 gene
mm10_v2_chr17_+_84511832_84511913	0.0228011	UCACAUU	ENSMUST00000047206.5|Plekhh2|ENSMUSG00000040852.5|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
mm10_v2_chr6_-_92706145_92706234	0.0214911	UCACAUU	ENSMUST00000032093.5|Prickle2|ENSMUSG00000030020.7|prickle homolog 2 (Drosophila)
mm10_v2_chr6_-_28421680_28421741	0.0202162	UCACAUU	ENSMUST00000090511.3|Gcc1|ENSMUSG00000029708.9|golgi coiled coil 1
mm10_v2_chr6_-_52012476_52012551	0.0185097	UCACAUU	ENSMUST00000078214.5|Skap2|ENSMUSG00000059182.5|src family associated phosphoprotein 2
mm10_v2_chr17_-_81649607_81649607	0.018092	UCACAUU	ENSMUST00000163680.2|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000086538.3|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000163123.1|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1
mm10_v2_chr3_-_105053125_105053151	0.0178871	UCACAUU	ENSMUST00000077548.5|Cttnbp2nl|ENSMUSG00000062127.5|CTTNBP2 N-terminal like
mm10_v2_chr2_-_28916412_28916440	0.017024	UCACAUU	ENSMUST00000050776.2|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila) 	ENSMUST00000113849.1|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila)
mm10_v2_chr3_-_133544390_133544412	0.0168794	UCACAUU	ENSMUST00000098603.3|Tet2|ENSMUSG00000040943.8|tet methylcytosine dioxygenase 2
mm10_v2_chr4_-_126429501_126429556	0.0165777	UCACAUU	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr11_-_19018956_19018973	0.0160472	UCACAUU	ENSMUST00000068264.7|Meis1|ENSMUSG00000020160.12|Meis homeobox 1 	ENSMUST00000144988.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1 	ENSMUST00000185131.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1
mm10_v2_chr5_-_49524809_49524904	0.0158016	UCACAUU	ENSMUST00000087395.4|Kcnip4|ENSMUSG00000029088.10|Kv channel interacting protein 4
mm10_v2_chr10_+_76468866_76468993	0.015541	UCACAUU	ENSMUST00000170795.1|Mcm3ap|ENSMUSG00000001150.6|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein
mm10_v2_chr2_-_33468493_33468572	0.0144567	UCACAUU	ENSMUST00000113156.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000028125.5|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000126442.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43
mm10_v2_chr16_+_8830093_8830104	0.0121182	UCACAUU	ENSMUST00000023150.5|1810013L24Rik|ENSMUSG00000022507.5|RIKEN cDNA 1810013L24 gene
mm10_v2_chr8_+_117257019_117257107	0.0117331	UCACAUU	ENSMUST00000166750.1|Cmip|ENSMUSG00000034390.9|c-Maf inducing protein
mm10_v2_chr4_+_59805829_59805914	0.00985074	UCACAUU	ENSMUST00000030080.6|Snx30|ENSMUSG00000028385.8|sorting nexin family member 30
mm10_v2_chr3_-_26133734_26133734	0.00731476	UCACAUU	ENSMUST00000108308.3|Nlgn1|ENSMUSG00000063887.7|neuroligin 1 	ENSMUST00000075054.4|Nlgn1|ENSMUSG00000063887.7|neuroligin 1
mm10_v2_chr2_-_104494400_104494463	0.00700361	UCACAUU	ENSMUST00000028600.7|Hipk3|ENSMUSG00000027177.8|homeodomain interacting protein kinase 3
mm10_v2_chr6_-_120822680_120822707	0.00609654	UCACAUU	ENSMUST00000019354.8|Atp6v1e1|ENSMUSG00000019210.8|ATPase, H+ transporting, lysosomal V1 subunit E1
mm10_v2_chr16_+_55973881_55973892	0.00600274	UCACAUU	ENSMUST00000050248.8|Rpl24|ENSMUSG00000022601.11|ribosomal protein L24
mm10_v2_chr11_+_117115195_117115257	0.00493934	UCACAUU	ENSMUST00000103026.3|Sec14l1|ENSMUSG00000020823.10|SEC14-like 1 (S. cerevisiae) 	ENSMUST00000090433.5|Sec14l1|ENSMUSG00000020823.10|SEC14-like 1 (S. cerevisiae)
mm10_v2_chr2_-_73892530_73892555	0.00489578	UCACAUU	ENSMUST00000136958.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112010.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000128531.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112017.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr8_-_111854278_111854356	0.00481059	UCACAUU	ENSMUST00000034432.5|Cfdp1|ENSMUSG00000031954.5|craniofacial development protein 1
mm10_v2_chr1_-_83408190_83408222	0.0038587	UCACAUU	ENSMUST00000160953.1|Sphkap|ENSMUSG00000026163.11|SPHK1 interactor, AKAP domain containing
mm10_v2_chr4_+_134315112_134315126	0.0038413	UCACAUU	ENSMUST00000105875.1|Trim63|ENSMUSG00000028834.7|tripartite motif-containing 63 	ENSMUST00000030638.6|Trim63|ENSMUSG00000028834.7|tripartite motif-containing 63
mm10_v2_chr9_+_118478344_118478451	0.00349467	UCACAUU	ENSMUST00000035020.8|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr4_-_101265236_101265282	0.00348008	UCACAUU	ENSMUST00000149297.1|Jak1|ENSMUSG00000028530.8|Janus kinase 1 	ENSMUST00000102781.3|Jak1|ENSMUSG00000028530.8|Janus kinase 1
mm10_v2_chr12_-_102878406_102878449	0.00141767	UCACAUU	ENSMUST00000045652.6|Btbd7|ENSMUSG00000041702.6|BTB (POZ) domain containing 7
mm10_v2_chr13_+_97241096_97241116	0.00105042	UCACAUU	ENSMUST00000041623.7|Enc1|ENSMUSG00000041773.7|ectodermal-neural cortex 1
mm10_v2_chr8_+_69088646_69088744	0.000580204	UCACAUU	ENSMUST00000006435.7|Atp6v1b2|ENSMUSG00000006273.8|ATPase, H+ transporting, lysosomal V1 subunit B2
mm10_v2_chr11_-_5381734_5381745	3.48464e-05	UCACAUU	ENSMUST00000172492.1|Znrf3|ENSMUSG00000041961.8|zinc and ring finger 3
