mm10_v2_chr4_-_122961173_122961193	3.43636	UCACAGU	ENSMUST00000030408.5|Mfsd2a|ENSMUSG00000028655.5|major facilitator superfamily domain containing 2A 	ENSMUST00000127047.1|Mfsd2a|ENSMUSG00000028655.5|major facilitator superfamily domain containing 2A
mm10_v2_chr2_+_102658640_102658669	3.37727	UCACAGU	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr10_-_109010955_109010983	2.44221	UCACAGU	ENSMUST00000105276.1|Syt1|ENSMUSG00000035864.8|synaptotagmin I 	ENSMUST00000064054.7|Syt1|ENSMUSG00000035864.8|synaptotagmin I
mm10_v2_chr4_-_105109829_105109913	2.08075	UCACAGU	ENSMUST00000030243.7|Prkaa2|ENSMUSG00000028518.8|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm10_v2_chr10_+_87859255_87859266	1.91744	UCACAGU	ENSMUST00000105300.2|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr5_+_73491026_73491110	1.77444	UCACAGU	ENSMUST00000063882.5|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) 	ENSMUST00000113558.1|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
mm10_v2_chr16_-_46010212_46010223	1.67226	UCACAGU	ENSMUST00000130481.1|Plcxd2|ENSMUSG00000087141.1|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm10_v2_chr16_+_44173239_44173270	1.49122	UCACAGU	ENSMUST00000119746.1|Gm608|ENSMUSG00000068284.8|predicted gene 608
mm10_v2_chr14_+_17660956_17660963	1.40072	UCACAGU	ENSMUST00000022303.7|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta 	ENSMUST00000091471.4|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta
mm10_v2_chr6_+_17463749_17463809	1.35618	UCACAGU	ENSMUST00000115443.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr15_+_54571358_54571439	1.34465	UCACAGU	ENSMUST00000025356.2|Mal2|ENSMUSG00000024479.2|mal, T cell differentiation protein 2
mm10_v2_chr14_+_8002890_8002946	1.3391	UCACAGU	ENSMUST00000166497.1|Abhd6|ENSMUSG00000025277.7|abhydrolase domain containing 6
mm10_v2_chr1_-_51478390_51478406	1.32906	UCACAGU	ENSMUST00000027279.5|Nabp1|ENSMUSG00000026107.5|nucleic acid binding protein 1
mm10_v2_chr18_+_64340225_64340364	1.3246	UCACAGU	ENSMUST00000175965.2|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2 	ENSMUST00000115145.3|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2
mm10_v2_chr19_+_8664005_8664120	1.31864	UCACAGU	ENSMUST00000035444.3|Chrm1|ENSMUSG00000032773.3|cholinergic receptor, muscarinic 1, CNS 	ENSMUST00000163785.1|Chrm1|ENSMUSG00000032773.3|cholinergic receptor, muscarinic 1, CNS
mm10_v2_chr18_+_51117754_51117898	1.30759	UCACAGU	ENSMUST00000116639.2|Prr16|ENSMUSG00000073565.4|proline rich 16
mm10_v2_chr7_-_43489967_43490075	1.28151	UCACAGU	ENSMUST00000107974.1|Iglon5|ENSMUSG00000013367.4|IgLON family member 5
mm10_v2_chr14_-_18239053_18239127	1.27862	UCACAGU	ENSMUST00000090543.5|Nr1d2|ENSMUSG00000021775.10|nuclear receptor subfamily 1, group D, member 2
mm10_v2_chr7_+_114415272_114415297	1.26225	UCACAGU	ENSMUST00000032909.8|Pde3b|ENSMUSG00000030671.8|phosphodiesterase 3B, cGMP-inhibited
mm10_v2_chr19_-_34879452_34879465	1.249	UCACAGU	ENSMUST00000036584.5|Pank1|ENSMUSG00000033610.9|pantothenate kinase 1
mm10_v2_chr11_-_87987528_87987537	1.16393	UCACAGU	ENSMUST00000020775.2|Dynll2|ENSMUSG00000020483.8|dynein light chain LC8-type 2
mm10_v2_chr1_+_152399824_152399881	1.15708	UCACAGU	ENSMUST00000044311.8|Colgalt2|ENSMUSG00000032649.8|collagen beta(1-O)galactosyltransferase 2
mm10_v2_chr6_-_72617000_72617000	1.13886	UCACAGU	ENSMUST00000070524.4|Tgoln1|ENSMUSG00000056429.4|trans-golgi network protein
mm10_v2_chr14_-_29721835_29721886	1.09613	UCACAGU	ENSMUST00000022567.7|Cacna2d3|ENSMUSG00000021991.7|calcium channel, voltage-dependent, alpha2/delta subunit 3
mm10_v2_chr10_+_107271827_107271850	1.09154	UCACAGU	ENSMUST00000020057.8|Lin7a|ENSMUSG00000019906.8|lin-7 homolog A (C. elegans) 	ENSMUST00000105280.3|Lin7a|ENSMUSG00000019906.8|lin-7 homolog A (C. elegans)
mm10_v2_chr14_-_45388772_45388836	1.0894	UCACAGU	ENSMUST00000046191.7|Gnpnat1|ENSMUSG00000037722.7|glucosamine-phosphate N-acetyltransferase 1
mm10_v2_chrX_-_162643629_162643665	1.0746	UCACAGU	ENSMUST00000112334.1|Reps2|ENSMUSG00000040855.9|RALBP1 associated Eps domain containing protein 2
mm10_v2_chr1_-_136960427_136960494	1.06335	UCACAGU	ENSMUST00000027649.7|Nr5a2|ENSMUSG00000026398.8|nuclear receptor subfamily 5, group A, member 2
mm10_v2_chr17_-_91092715_91092822	1.02865	UCACAGU	ENSMUST00000160800.2|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000159778.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000160844.3|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr15_+_99392882_99392903	1.00904	UCACAGU	ENSMUST00000023749.8|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr9_+_44379490_44379513	1.00324	UCACAGU	ENSMUST00000066601.6|Hyou1|ENSMUSG00000032115.7|hypoxia up-regulated 1
mm10_v2_chr1_-_132139666_132139692	0.981433	UCACAGU	ENSMUST00000027697.5|Cdk18|ENSMUSG00000026437.5|cyclin-dependent kinase 18
mm10_v2_chr7_+_64501687_64501706	0.981056	UCACAGU	ENSMUST00000032732.8|Apba2|ENSMUSG00000030519.8|amyloid beta (A4) precursor protein-binding, family A, member 2
mm10_v2_chr10_+_94036001_94036121	0.96844	UCACAGU	ENSMUST00000020208.4|Fgd6|ENSMUSG00000020021.4|FYVE, RhoGEF and PH domain containing 6
mm10_v2_chr12_-_75735729_75735736	0.967278	UCACAGU	ENSMUST00000021450.4|Sgpp1|ENSMUSG00000021054.5|sphingosine-1-phosphate phosphatase 1
mm10_v2_chr4_+_137862237_137862249	0.956439	UCACAGU	ENSMUST00000102518.3|Ece1|ENSMUSG00000057530.8|endothelin converting enzyme 1
mm10_v2_chr5_+_53998417_53998575	0.944825	UCACAGU	ENSMUST00000117661.2|Stim2|ENSMUSG00000039156.13|stromal interaction molecule 2 	ENSMUST00000071083.7|Stim2|ENSMUSG00000039156.13|stromal interaction molecule 2
mm10_v2_chr15_-_97055942_97055964	0.944632	UCACAGU	ENSMUST00000023101.3|Slc38a4|ENSMUSG00000022464.7|solute carrier family 38, member 4
mm10_v2_chr6_+_34709442_34709497	0.93882	UCACAGU	ENSMUST00000115021.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr6_-_95718800_95718837	0.938787	UCACAGU	ENSMUST00000079847.5|Suclg2|ENSMUSG00000061838.5|succinate-Coenzyme A ligase, GDP-forming, beta subunit
mm10_v2_chr9_-_43239816_43239842	0.938014	UCACAGU	ENSMUST00000034512.5|Oaf|ENSMUSG00000032014.5|OAF homolog (Drosophila)
mm10_v2_chr11_-_86993682_86993707	0.922622	UCACAGU	ENSMUST00000018571.4|Ypel2|ENSMUSG00000018427.7|yippee-like 2 (Drosophila)
mm10_v2_chr6_+_115361221_115361280	0.917992	UCACAGU	ENSMUST00000171644.1|Pparg|ENSMUSG00000000440.6|peroxisome proliferator activated receptor gamma
mm10_v2_chr17_+_43801823_43801863	0.909958	UCACAGU	ENSMUST00000044895.5|Rcan2|ENSMUSG00000039601.9|regulator of calcineurin 2
mm10_v2_chr14_-_25769033_25769083	0.901571	UCACAGU	ENSMUST00000069180.7|Zcchc24|ENSMUSG00000055538.7|zinc finger, CCHC domain containing 24
mm10_v2_chr11_+_104231390_104231453	0.892455	UCACAGU	ENSMUST00000106992.3|Mapt|ENSMUSG00000018411.11|microtubule-associated protein tau
mm10_v2_chr3_-_89322883_89322965	0.88592	UCACAGU	ENSMUST00000029673.5|Efna3|ENSMUSG00000028039.7|ephrin A3
mm10_v2_chr2_+_18677002_18677053	0.88374	UCACAGU	ENSMUST00000028071.6|Bmi1|ENSMUSG00000026739.7|Bmi1 polycomb ring finger oncogene
mm10_v2_chr11_-_40755201_40755311	0.876315	UCACAGU	ENSMUST00000020576.7|Ccng1|ENSMUSG00000020326.7|cyclin G1
mm10_v2_chr1_-_189343704_189343832	0.874008	UCACAGU	ENSMUST00000180044.1|Kcnk2|ENSMUSG00000037624.9|potassium channel, subfamily K, member 2 	ENSMUST00000110920.1|Kcnk2|ENSMUSG00000037624.9|potassium channel, subfamily K, member 2
mm10_v2_chr2_-_103303179_103303278	0.871305	UCACAGU	ENSMUST00000090475.3|Ehf|ENSMUSG00000012350.9|ets homologous factor
mm10_v2_chr3_+_36863102_36863147	0.86499	UCACAGU	ENSMUST00000057272.8|4932438A13Rik|ENSMUSG00000037270.11|RIKEN cDNA 4932438A13 gene
mm10_v2_chr11_+_90249469_90249482	0.862727	UCACAGU	ENSMUST00000004050.6|Mmd|ENSMUSG00000003948.10|monocyte to macrophage differentiation-associated
mm10_v2_chr9_-_44799179_44799307	0.859065	UCACAGU	ENSMUST00000114705.1|Tmem25|ENSMUSG00000002032.10|transmembrane protein 25 	ENSMUST00000002100.7|Tmem25|ENSMUSG00000002032.10|transmembrane protein 25
mm10_v2_chr2_-_5714490_5714538	0.85719	UCACAGU	ENSMUST00000044009.7|Camk1d|ENSMUSG00000039145.10|calcium/calmodulin-dependent protein kinase ID
mm10_v2_chr17_+_64600702_64600739	0.856326	UCACAGU	ENSMUST00000086723.3|Man2a1|ENSMUSG00000024085.7|mannosidase 2, alpha 1
mm10_v2_chr12_-_44210061_44210077	0.84629	UCACAGU	ENSMUST00000015049.3|Dnajb9|ENSMUSG00000014905.3|DnaJ (Hsp40) homolog, subfamily B, member 9
mm10_v2_chr3_-_116712644_116712655	0.83168	UCACAGU	ENSMUST00000029569.2|Slc35a3|ENSMUSG00000027957.7|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
mm10_v2_chr4_+_97777606_97777632	0.829198	UCACAGU	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr18_+_36281069_36281151	0.829051	UCACAGU	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr10_-_20725023_20725078	0.826234	UCACAGU	ENSMUST00000020165.7|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr3_+_62338344_62338344	0.822235	UCACAGU	ENSMUST00000079300.6|Arhgef26|ENSMUSG00000036885.8|Rho guanine nucleotide exchange factor (GEF) 26
mm10_v2_chr7_-_84151868_84151938	0.811803	UCACAGU	ENSMUST00000117085.1|Abhd17c|ENSMUSG00000038459.9|abhydrolase domain containing 17C
mm10_v2_chr17_+_26414820_26414965	0.808174	UCACAGU	ENSMUST00000182897.1|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila) 	ENSMUST00000183077.1|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila) 	ENSMUST00000053020.7|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila)
mm10_v2_chr12_-_72070991_72071079	0.788843	UCACAGU	ENSMUST00000050649.4|Gpr135|ENSMUSG00000043398.4|G protein-coupled receptor 135
mm10_v2_chr6_+_91684061_91684132	0.787767	UCACAGU	ENSMUST00000032185.7|Slc6a6|ENSMUSG00000030096.7|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm10_v2_chr17_-_79715034_79715047	0.787621	UCACAGU	ENSMUST00000024894.1|Cyp1b1|ENSMUSG00000024087.3|cytochrome P450, family 1, subfamily b, polypeptide 1
mm10_v2_chr11_+_73267388_73267539	0.787118	UCACAGU	ENSMUST00000049676.2|Trpv3|ENSMUSG00000043029.2|transient receptor potential cation channel, subfamily V, member 3
mm10_v2_chr16_+_42907563_42907684	0.784334	UCACAGU	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr6_+_50110186_50110383	0.784077	UCACAGU	ENSMUST00000166318.1|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 	ENSMUST00000036236.8|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 	ENSMUST00000036225.8|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
mm10_v2_chr4_+_100095791_100095867	0.776416	UCACAGU	ENSMUST00000039630.5|Ror1|ENSMUSG00000035305.5|receptor tyrosine kinase-like orphan receptor 1
mm10_v2_chr3_-_129332713_129332726	0.753351	UCACAGU	ENSMUST00000029658.7|Enpep|ENSMUSG00000028024.8|glutamyl aminopeptidase
mm10_v2_chr10_+_7681197_7681225	0.744152	UCACAGU	ENSMUST00000165952.1|Lats1|ENSMUSG00000040021.6|large tumor suppressor
mm10_v2_chr18_+_84088077_84088178	0.74094	UCACAGU	ENSMUST00000060223.2|Zadh2|ENSMUSG00000049090.2|zinc binding alcohol dehydrogenase, domain containing 2
mm10_v2_chr9_+_83548309_83548338	0.735388	UCACAGU	ENSMUST00000113215.3|Sh3bgrl2|ENSMUSG00000032261.10|SH3 domain binding glutamic acid-rich protein like 2
mm10_v2_chr5_-_98030727_98030765	0.735286	UCACAGU	ENSMUST00000031281.9|Antxr2|ENSMUSG00000029338.9|anthrax toxin receptor 2
mm10_v2_chr5_-_107987003_107987085	0.731047	UCACAGU	ENSMUST00000145239.1|Fam69a|ENSMUSG00000029270.4|family with sequence similarity 69, member A 	ENSMUST00000031198.4|Fam69a|ENSMUSG00000029270.4|family with sequence similarity 69, member A
mm10_v2_chr10_+_58255465_58255539	0.724808	UCACAGU	ENSMUST00000057659.7|Gcc2|ENSMUSG00000038039.7|GRIP and coiled-coil domain containing 2 	ENSMUST00000162041.1|Gcc2|ENSMUSG00000038039.7|GRIP and coiled-coil domain containing 2 	ENSMUST00000162860.1|Gcc2|ENSMUSG00000038039.7|GRIP and coiled-coil domain containing 2
mm10_v2_chr8_+_108714644_108714644	0.720103	UCACAGU	ENSMUST00000043896.8|Zfhx3|ENSMUSG00000038872.8|zinc finger homeobox 3
mm10_v2_chr2_-_75704535_75704641	0.719203	UCACAGU	ENSMUST00000102672.4|Nfe2l2|ENSMUSG00000015839.6|nuclear factor, erythroid derived 2, like 2
mm10_v2_chr3_+_7366598_7366641	0.718919	UCACAGU	ENSMUST00000028999.6|Pkia|ENSMUSG00000027499.7|protein kinase inhibitor, alpha
mm10_v2_chr4_+_12140263_12140317	0.716939	UCACAGU	ENSMUST00000050069.2|Rbm12b1|ENSMUSG00000046667.8|RNA binding motif protein 12 B1 	ENSMUST00000069128.7|Rbm12b1|ENSMUSG00000046667.8|RNA binding motif protein 12 B1
mm10_v2_chr15_-_60824942_60825080	0.714209	UCACAGU	ENSMUST00000100635.3|Fam84b|ENSMUSG00000072568.3|family with sequence similarity 84, member B
mm10_v2_chr3_+_132085281_132085299	0.706981	UCACAGU	ENSMUST00000029665.5|Dkk2|ENSMUSG00000028031.5|dickkopf homolog 2 (Xenopus laevis)
mm10_v2_chr8_+_61224162_61224174	0.703707	UCACAGU	ENSMUST00000034060.5|Sh3rf1|ENSMUSG00000031642.8|SH3 domain containing ring finger 1
mm10_v2_chr2_-_113758638_113758655	0.694935	UCACAGU	ENSMUST00000099575.3|Grem1|ENSMUSG00000074934.3|gremlin 1
mm10_v2_chr13_-_104109576_104109619	0.691083	UCACAGU	ENSMUST00000109315.3|Nln|ENSMUSG00000021710.10|neurolysin (metallopeptidase M3 family)
mm10_v2_chr1_-_157412576_157412621	0.679523	UCACAGU	ENSMUST00000078308.6|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2 	ENSMUST00000139470.1|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2
mm10_v2_chr3_+_114904062_114904142	0.678784	UCACAGU	ENSMUST00000081752.6|Olfm3|ENSMUSG00000027965.9|olfactomedin 3
mm10_v2_chr9_+_100643448_100643542	0.676971	UCACAGU	ENSMUST00000146312.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1 	ENSMUST00000129269.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr10_+_98915117_98915172	0.673969	UCACAGU	ENSMUST00000020107.7|Atp2b1|ENSMUSG00000019943.9|ATPase, Ca++ transporting, plasma membrane 1
mm10_v2_chr13_+_110395041_110395057	0.661986	UCACAGU	ENSMUST00000022212.7|Plk2|ENSMUSG00000021701.7|polo-like kinase 2
mm10_v2_chr1_+_151755339_151755393	0.658943	UCACAGU	ENSMUST00000059498.5|Edem3|ENSMUSG00000043019.6|ER degradation enhancer, mannosidase alpha-like 3
mm10_v2_chr4_-_141139727_141139772	0.658864	UCACAGU	ENSMUST00000148204.1|Szrd1|ENSMUSG00000040842.11|SUZ RNA binding domain containing 1 	ENSMUST00000102487.3|Szrd1|ENSMUSG00000040842.11|SUZ RNA binding domain containing 1
mm10_v2_chr17_-_80480435_80480462	0.65135	UCACAGU	ENSMUST00000068714.5|Sos1|ENSMUSG00000024241.6|son of sevenless homolog 1 (Drosophila)
mm10_v2_chr19_-_55099417_55099492	0.647819	UCACAGU	ENSMUST00000061856.5|Gpam|ENSMUSG00000024978.10|glycerol-3-phosphate acyltransferase, mitochondrial
mm10_v2_chr6_+_97807014_97807067	0.643457	UCACAGU	ENSMUST00000043637.7|Mitf|ENSMUSG00000035158.9|microphthalmia-associated transcription factor
mm10_v2_chr1_+_160906372_160906460	0.643093	UCACAGU	ENSMUST00000161609.1|Rc3h1|ENSMUSG00000040423.4|RING CCCH (C3H) domains 1
mm10_v2_chr1_-_82291370_82291416	0.641672	UCACAGU	ENSMUST00000069799.2|Irs1|ENSMUSG00000055980.2|insulin receptor substrate 1
mm10_v2_chr17_+_4994904_4995074	0.638501	UCACAGU	ENSMUST00000092723.4|Arid1b|ENSMUSG00000069729.7|AT rich interactive domain 1B (SWI-like) 	ENSMUST00000115797.2|Arid1b|ENSMUSG00000069729.7|AT rich interactive domain 1B (SWI-like)
mm10_v2_chrX_-_56598069_56598107	0.636267	UCACAGU	ENSMUST00000059899.2|Mmgt1|ENSMUSG00000061273.3|membrane magnesium transporter 1
mm10_v2_chr13_-_114388057_114388094	0.63558	UCACAGU	ENSMUST00000022286.6|Ndufs4|ENSMUSG00000021764.6|NADH dehydrogenase (ubiquinone) Fe-S protein 4
mm10_v2_chr8_+_35587780_35587825	0.632631	UCACAGU	ENSMUST00000037666.5|Mfhas1|ENSMUSG00000070056.5|malignant fibrous histiocytoma amplified sequence 1
mm10_v2_chr11_-_100527896_100528000	0.632072	UCACAGU	ENSMUST00000107389.1|Acly|ENSMUSG00000020917.11|ATP citrate lyase 	ENSMUST00000007131.9|Acly|ENSMUSG00000020917.11|ATP citrate lyase
mm10_v2_chr15_-_78120011_78120033	0.630119	UCACAGU	ENSMUST00000019290.2|Cacng2|ENSMUSG00000019146.2|calcium channel, voltage-dependent, gamma subunit 2
mm10_v2_chr10_+_83543941_83544007	0.629775	UCACAGU	ENSMUST00000038388.5|A230046K03Rik|ENSMUSG00000034560.5|RIKEN cDNA A230046K03 gene
mm10_v2_chr11_+_79339792_79339913	0.628621	UCACAGU	ENSMUST00000108251.2|Nf1|ENSMUSG00000020716.9|neurofibromatosis 1 	ENSMUST00000071325.2|Nf1|ENSMUSG00000020716.9|neurofibromatosis 1
mm10_v2_chr7_-_70360593_70360746	0.626082	UCACAGU	ENSMUST00000032768.7|Nr2f2|ENSMUSG00000030551.7|nuclear receptor subfamily 2, group F, member 2
mm10_v2_chr1_+_59482133_59482179	0.624997	UCACAGU	ENSMUST00000114246.2|Fzd7|ENSMUSG00000041075.7|frizzled homolog 7 (Drosophila) 	ENSMUST00000037105.6|Fzd7|ENSMUSG00000041075.7|frizzled homolog 7 (Drosophila)
mm10_v2_chr2_-_180273488_180273502	0.623819	UCACAGU	ENSMUST00000108891.1|Cables2|ENSMUSG00000038990.8|CDK5 and Abl enzyme substrate 2
mm10_v2_chr8_-_3279606_3279622	0.623553	UCACAGU	ENSMUST00000091291.4|Insr|ENSMUSG00000005534.9|insulin receptor
mm10_v2_chr14_+_48120841_48120869	0.622623	UCACAGU	ENSMUST00000073150.4|Peli2|ENSMUSG00000021846.8|pellino 2
mm10_v2_chr10_+_11149406_11149430	0.619032	UCACAGU	ENSMUST00000044053.6|Shprh|ENSMUSG00000090112.2|SNF2 histone linker PHD RING helicase
mm10_v2_chr15_+_58415456_58415512	0.616731	UCACAGU	ENSMUST00000037270.3|D15Ertd621e|ENSMUSG00000037119.3|DNA segment, Chr 15, ERATO Doi 621, expressed
mm10_v2_chr14_-_61439831_61439947	0.612243	UCACAGU	ENSMUST00000022496.7|Kpna3|ENSMUSG00000021929.8|karyopherin (importin) alpha 3
mm10_v2_chr2_-_116065798_116065853	0.604468	UCACAGU	ENSMUST00000110907.1|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000110908.2|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr1_-_160212864_160212892	0.598795	UCACAGU	ENSMUST00000014370.5|Cacybp|ENSMUSG00000014226.5|calcyclin binding protein
mm10_v2_chr10_+_111972664_111972805	0.595449	UCACAGU	ENSMUST00000163048.1|Krr1|ENSMUSG00000063334.10|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENSMUST00000174653.1|Krr1|ENSMUSG00000063334.10|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr4_+_57434247_57434368	0.59396	UCACAGU	ENSMUST00000102905.1|Palm2|ENSMUSG00000090053.3|paralemmin 2
mm10_v2_chr10_-_54075730_54075796	0.579277	UCACAGU	ENSMUST00000105469.1|Man1a|ENSMUSG00000003746.9|mannosidase 1, alpha 	ENSMUST00000003843.8|Man1a|ENSMUSG00000003746.9|mannosidase 1, alpha
mm10_v2_chr10_+_110920170_110920188	0.576121	UCACAGU	ENSMUST00000020403.5|Csrp2|ENSMUSG00000020186.6|cysteine and glycine-rich protein 2
mm10_v2_chr2_+_180042496_180042562	0.574593	UCACAGU	ENSMUST00000041126.8|Ss18l1|ENSMUSG00000039086.9|synovial sarcoma translocation gene on chromosome 18-like 1
mm10_v2_chr9_-_65908676_65908798	0.57278	UCACAGU	ENSMUST00000119245.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4 	ENSMUST00000134338.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4 	ENSMUST00000179395.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4
mm10_v2_chr11_+_73047783_73047902	0.569978	UCACAGU	ENSMUST00000021135.3|1200014J11Rik|ENSMUSG00000020783.8|RIKEN cDNA 1200014J11 gene
mm10_v2_chr17_+_53566971_53567023	0.568989	UCACAGU	ENSMUST00000000724.8|Kat2b|ENSMUSG00000000708.8|K(lysine) acetyltransferase 2B
mm10_v2_chr13_-_64274879_64274947	0.567917	UCACAGU	ENSMUST00000109770.1|Cdc14b|ENSMUSG00000033102.8|CDC14 cell division cycle 14B
mm10_v2_chr10_-_71238274_71238288	0.565927	UCACAGU	ENSMUST00000092430.4|Tfam|ENSMUSG00000003923.8|transcription factor A, mitochondrial 	ENSMUST00000105432.3|Tfam|ENSMUSG00000003923.8|transcription factor A, mitochondrial
mm10_v2_chr15_+_32920723_32920826	0.562483	UCACAGU	ENSMUST00000022871.5|Sdc2|ENSMUSG00000022261.5|syndecan 2
mm10_v2_chr4_+_47353222_47353265	0.545584	UCACAGU	ENSMUST00000007757.8|Tgfbr1|ENSMUSG00000007613.9|transforming growth factor, beta receptor I
mm10_v2_chr14_+_73237891_73238007	0.545006	UCACAGU	ENSMUST00000044405.6|Lpar6|ENSMUSG00000033446.6|lysophosphatidic acid receptor 6
mm10_v2_chr7_-_19822698_19822776	0.539325	UCACAGU	ENSMUST00000120537.1|Bcl3|ENSMUSG00000053175.10|B cell leukemia/lymphoma 3
mm10_v2_chr14_-_44859370_44859381	0.537031	UCACAGU	ENSMUST00000095959.1|Ptgdr|ENSMUSG00000071489.1|prostaglandin D receptor
mm10_v2_chr18_+_34220978_34221020	0.533759	UCACAGU	ENSMUST00000079362.5|Apc|ENSMUSG00000005871.8|adenomatosis polyposis coli 	ENSMUST00000115781.3|Apc|ENSMUSG00000005871.8|adenomatosis polyposis coli
mm10_v2_chr2_+_28641227_28641262	0.532319	UCACAGU	ENSMUST00000028155.5|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1 	ENSMUST00000113869.1|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1 	ENSMUST00000113867.2|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1
mm10_v2_chr14_-_72709986_72710027	0.528852	UCACAGU	ENSMUST00000089017.5|Fndc3a|ENSMUSG00000033487.8|fibronectin type III domain containing 3A
mm10_v2_chr3_+_54755574_54755589	0.526646	UCACAGU	ENSMUST00000029371.2|Smad9|ENSMUSG00000027796.2|SMAD family member 9
mm10_v2_chr7_+_132931142_132931155	0.523823	UCACAGU	ENSMUST00000106157.1|Zranb1|ENSMUSG00000030967.7|zinc finger, RAN-binding domain containing 1
mm10_v2_chr19_+_3851797_3851811	0.521943	UCACAGU	ENSMUST00000072055.6|Chka|ENSMUSG00000024843.9|choline kinase alpha
mm10_v2_chr4_+_125490688_125490704	0.510861	UCACAGU	ENSMUST00000030676.7|Grik3|ENSMUSG00000001985.9|glutamate receptor, ionotropic, kainate 3
mm10_v2_chr13_+_46669517_46669545	0.503528	UCACAGU	ENSMUST00000099547.3|C78339|ENSMUSG00000069237.8|expressed sequence C78339
mm10_v2_chr18_+_32163073_32163115	0.503343	UCACAGU	ENSMUST00000096575.3|Map3k2|ENSMUSG00000024383.8|mitogen-activated protein kinase kinase kinase 2
mm10_v2_chr10_-_78352323_78352459	0.498766	UCACAGU	ENSMUST00000001240.5|Agpat3|ENSMUSG00000001211.8|1-acylglycerol-3-phosphate O-acyltransferase 3
mm10_v2_chr7_-_44375006_44375035	0.494489	UCACAGU	ENSMUST00000107933.1|1700008O03Rik|ENSMUSG00000008028.9|RIKEN cDNA 1700008O03 gene
mm10_v2_chr15_-_33687840_33687883	0.490729	UCACAGU	ENSMUST00000042021.3|Tspyl5|ENSMUSG00000038984.3|testis-specific protein, Y-encoded-like 5
mm10_v2_chr3_+_32436151_32436151	0.488479	UCACAGU	ENSMUST00000029201.7|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr6_-_134566913_134566995	0.482457	UCACAGU	ENSMUST00000032322.8|Lrp6|ENSMUSG00000030201.9|low density lipoprotein receptor-related protein 6
mm10_v2_chr7_-_71351485_71351485	0.481559	UCACAGU	ENSMUST00000094315.2|Gm10295|ENSMUSG00000070511.2|predicted gene 10295
mm10_v2_chr17_+_50509518_50509553	0.480884	UCACAGU	ENSMUST00000043938.6|Plcl2|ENSMUSG00000038910.6|phospholipase C-like 2
mm10_v2_chr12_-_108275409_108275417	0.478024	UCACAGU	ENSMUST00000136175.1|Ccdc85c|ENSMUSG00000084883.1|coiled-coil domain containing 85C
mm10_v2_chr3_-_104220360_104220378	0.475417	UCACAGU	ENSMUST00000064371.7|Magi3|ENSMUSG00000052539.9|membrane associated guanylate kinase, WW and PDZ domain containing 3
mm10_v2_chrX_-_143933204_143933311	0.471986	UCACAGU	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr14_+_47276910_47276936	0.470601	UCACAGU	ENSMUST00000065562.4|Socs4|ENSMUSG00000048379.8|suppressor of cytokine signaling 4
mm10_v2_chr14_+_62837679_62837726	0.468938	UCACAGU	ENSMUST00000014691.8|Wdfy2|ENSMUSG00000014547.9|WD repeat and FYVE domain containing 2
mm10_v2_chr2_-_65238625_65238643	0.466429	UCACAGU	ENSMUST00000112429.2|Cobll1|ENSMUSG00000034903.12|Cobl-like 1 	ENSMUST00000102726.1|Cobll1|ENSMUSG00000034903.12|Cobl-like 1 	ENSMUST00000112430.1|Cobll1|ENSMUSG00000034903.12|Cobl-like 1
mm10_v2_chr11_-_120824098_120824178	0.466258	UCACAGU	ENSMUST00000055655.7|Fasn|ENSMUSG00000025153.8|fatty acid synthase
mm10_v2_chr9_+_14276301_14276347	0.464881	UCACAGU	ENSMUST00000034507.7|Sesn3|ENSMUSG00000032009.7|sestrin 3
mm10_v2_chr11_-_98149551_98149621	0.463557	UCACAGU	ENSMUST00000103143.3|Fbxl20|ENSMUSG00000020883.12|F-box and leucine-rich repeat protein 20
mm10_v2_chr10_-_86498836_86498858	0.461178	UCACAGU	ENSMUST00000120638.1|Syn3|ENSMUSG00000059602.8|synapsin III
mm10_v2_chr2_+_55437100_55437182	0.459448	UCACAGU	ENSMUST00000112633.2|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3 	ENSMUST00000112632.1|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3
mm10_v2_chr5_+_146231211_146231385	0.458658	UCACAGU	ENSMUST00000161181.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000161652.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000031640.8|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000159467.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8
mm10_v2_chr2_-_32431104_32431178	0.458079	UCACAGU	ENSMUST00000127961.1|Slc25a25|ENSMUSG00000026819.9|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 	ENSMUST00000136361.1|Slc25a25|ENSMUSG00000026819.9|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 	ENSMUST00000052119.7|Slc25a25|ENSMUSG00000026819.9|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm10_v2_chr12_+_111538101_111538243	0.457665	UCACAGU	ENSMUST00000166123.1|Eif5|ENSMUSG00000021282.10|eukaryotic translation initiation factor 5
mm10_v2_chr15_-_96460838_96460856	0.456925	UCACAGU	ENSMUST00000047835.6|Scaf11|ENSMUSG00000033228.7|SR-related CTD-associated factor 11
mm10_v2_chr19_+_7494033_7494068	0.451842	UCACAGU	ENSMUST00000170373.1|Atl3|ENSMUSG00000024759.7|atlastin GTPase 3
mm10_v2_chr8_-_71381907_71381977	0.449025	UCACAGU	ENSMUST00000002466.8|Nr2f6|ENSMUSG00000002393.8|nuclear receptor subfamily 2, group F, member 6
mm10_v2_chr9_+_68653761_68653786	0.44889	UCACAGU	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
mm10_v2_chr1_+_133246092_133246099	0.447841	UCACAGU	ENSMUST00000038295.8|Plekha6|ENSMUSG00000041757.9|pleckstrin homology domain containing, family A member 6 	ENSMUST00000105082.2|Plekha6|ENSMUSG00000041757.9|pleckstrin homology domain containing, family A member 6
mm10_v2_chr9_+_32116040_32116136	0.443876	UCACAGU	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr10_+_121365078_121365158	0.441496	UCACAGU	ENSMUST00000040344.6|Gns|ENSMUSG00000034707.6|glucosamine (N-acetyl)-6-sulfatase
mm10_v2_chr1_-_10232670_10232670	0.43653	UCACAGU	ENSMUST00000088615.4|Arfgef1|ENSMUSG00000067851.5|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) 	ENSMUST00000131556.1|Arfgef1|ENSMUSG00000067851.5|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)
mm10_v2_chr9_+_3532295_3532354	0.434738	UCACAGU	ENSMUST00000115733.1|Gucy1a2|ENSMUSG00000041624.9|guanylate cyclase 1, soluble, alpha 2
mm10_v2_chr6_+_37870786_37870882	0.430786	UCACAGU	ENSMUST00000120428.1|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24 	ENSMUST00000031859.7|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24
mm10_v2_chr5_+_93093428_93093457	0.427174	UCACAGU	ENSMUST00000074733.7|Sept11|ENSMUSG00000058013.8|septin 11
mm10_v2_chr13_+_55209776_55209788	0.426774	UCACAGU	ENSMUST00000099490.2|Nsd1|ENSMUSG00000021488.7|nuclear receptor-binding SET-domain protein 1
mm10_v2_chr16_+_29579331_29579342	0.425647	UCACAGU	ENSMUST00000160597.1|Opa1|ENSMUSG00000038084.10|optic atrophy 1
mm10_v2_chr8_+_54077532_54077532	0.425495	UCACAGU	ENSMUST00000033919.4|Vegfc|ENSMUSG00000031520.5|vascular endothelial growth factor C
mm10_v2_chrX_-_20291776_20291834	0.42238	UCACAGU	ENSMUST00000072451.4|Slc9a7|ENSMUSG00000037341.7|solute carrier family 9 (sodium/hydrogen exchanger), member 7
mm10_v2_chr11_-_113565740_113565792	0.420733	UCACAGU	ENSMUST00000071539.3|Slc39a11|ENSMUSG00000041654.9|solute carrier family 39 (metal ion transporter), member 11 	ENSMUST00000106633.3|Slc39a11|ENSMUSG00000041654.9|solute carrier family 39 (metal ion transporter), member 11 	ENSMUST00000042657.9|Slc39a11|ENSMUSG00000041654.9|solute carrier family 39 (metal ion transporter), member 11 	ENSMUST00000149034.1|Slc39a11|ENSMUSG00000041654.9|solute carrier family 39 (metal ion transporter), member 11
mm10_v2_chr11_+_53350783_53350833	0.417549	UCACAGU	ENSMUST00000060945.5|Aff4|ENSMUSG00000049470.7|AF4/FMR2 family, member 4
mm10_v2_chrX_-_162159717_162159732	0.41515	UCACAGU	ENSMUST00000087085.3|Nhs|ENSMUSG00000059493.7|Nance-Horan syndrome (human)
mm10_v2_chr4_+_108328136_108328180	0.414998	UCACAGU	ENSMUST00000131656.1|Selrc1|ENSMUSG00000048351.8|Sel1 repeat containing 1
mm10_v2_chr6_+_8948608_8948619	0.41444	UCACAGU	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr2_-_17731035_17731087	0.414268	UCACAGU	ENSMUST00000028080.5|Nebl|ENSMUSG00000053702.10|nebulette
mm10_v2_chr6_-_116193426_116193501	0.41265	UCACAGU	ENSMUST00000088896.3|Tmcc1|ENSMUSG00000030126.11|transmembrane and coiled coil domains 1
mm10_v2_chr9_-_70503718_70503805	0.411222	UCACAGU	ENSMUST00000034739.5|Rnf111|ENSMUSG00000032217.6|ring finger 111
mm10_v2_chr3_+_102010138_102010171	0.408486	UCACAGU	ENSMUST00000066187.4|Nhlh2|ENSMUSG00000048540.7|nescient helix loop helix 2
mm10_v2_chr11_+_98937669_98937735	0.407494	UCACAGU	ENSMUST00000107475.2|Rara|ENSMUSG00000037992.10|retinoic acid receptor, alpha 	ENSMUST00000068133.3|Rara|ENSMUSG00000037992.10|retinoic acid receptor, alpha
mm10_v2_chr7_+_49246812_49246844	0.404005	UCACAGU	ENSMUST00000184945.1|Nav2|ENSMUSG00000052512.9|neuron navigator 2
mm10_v2_chr1_+_60181495_60181591	0.403084	UCACAGU	ENSMUST00000160834.1|Nbeal1|ENSMUSG00000073664.5|neurobeachin like 1
mm10_v2_chr3_+_30792876_30792876	0.402542	UCACAGU	ENSMUST00000029256.7|Sec62|ENSMUSG00000027706.7|SEC62 homolog (S. cerevisiae)
mm10_v2_chr2_-_155930018_155930066	0.402408	UCACAGU	ENSMUST00000152766.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000139232.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000109632.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000006036.6|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000142655.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000159238.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1
mm10_v2_chr16_-_11254268_11254303	0.400738	UCACAGU	ENSMUST00000167571.1|Gspt1|ENSMUSG00000062203.8|G1 to S phase transition 1
mm10_v2_chr7_+_133637543_133637559	0.397377	UCACAGU	ENSMUST00000051169.6|2700050L05Rik|ENSMUSG00000039990.9|RIKEN cDNA 2700050L05 gene
mm10_v2_chr3_+_9250602_9250602	0.395048	UCACAGU	ENSMUST00000155203.1|Zbtb10|ENSMUSG00000069114.8|zinc finger and BTB domain containing 10
mm10_v2_chr13_+_41606216_41606216	0.39341	UCACAGU	ENSMUST00000129449.1|Tmem170b|ENSMUSG00000087370.2|transmembrane protein 170B
mm10_v2_chr2_-_27426992_27427061	0.391765	UCACAGU	ENSMUST00000056176.7|Vav2|ENSMUSG00000009621.12|vav 2 oncogene
mm10_v2_chr2_+_136713444_136713492	0.388002	UCACAGU	ENSMUST00000028727.4|Snap25|ENSMUSG00000027273.7|synaptosomal-associated protein 25 	ENSMUST00000110098.3|Snap25|ENSMUSG00000027273.7|synaptosomal-associated protein 25
mm10_v2_chrX_-_134161928_134161928	0.383656	UCACAGU	ENSMUST00000033611.4|Xkrx|ENSMUSG00000031258.4|X Kell blood group precursor related X linked
mm10_v2_chr10_+_106470281_106470367	0.383393	UCACAGU	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr13_+_74009419_74009453	0.383216	UCACAGU	ENSMUST00000022057.8|Tppp|ENSMUSG00000021573.8|tubulin polymerization promoting protein
mm10_v2_chr2_+_27677201_27677229	0.382142	UCACAGU	ENSMUST00000077257.5|Rxra|ENSMUSG00000015846.8|retinoid X receptor alpha
mm10_v2_chr7_+_113207465_113207595	0.38157	UCACAGU	ENSMUST00000047321.7|Arntl|ENSMUSG00000055116.7|aryl hydrocarbon receptor nuclear translocator-like
mm10_v2_chr16_-_38550173_38550258	0.380851	UCACAGU	ENSMUST00000036210.6|Poglut1|ENSMUSG00000034064.8|protein O-glucosyltransferase 1
mm10_v2_chr2_-_64097994_64098023	0.378464	UCACAGU	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr10_-_68278713_68278735	0.378038	UCACAGU	ENSMUST00000020106.7|Arid5b|ENSMUSG00000019947.9|AT rich interactive domain 5B (MRF1-like)
mm10_v2_chr9_+_77636494_77636528	0.375984	UCACAGU	ENSMUST00000057781.7|Klhl31|ENSMUSG00000044938.8|kelch-like 31
mm10_v2_chr15_-_58214882_58214926	0.374049	UCACAGU	ENSMUST00000022986.6|Fbxo32|ENSMUSG00000022358.6|F-box protein 32
mm10_v2_chrX_+_42067836_42067872	0.373877	UCACAGU	ENSMUST00000115094.1|Xiap|ENSMUSG00000025860.8|X-linked inhibitor of apoptosis
mm10_v2_chr2_-_120970706_120970761	0.372841	UCACAGU	ENSMUST00000028728.5|Ubr1|ENSMUSG00000027272.5|ubiquitin protein ligase E3 component n-recognin 1
mm10_v2_chr17_+_26715644_26715724	0.372548	UCACAGU	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr9_+_55326913_55326958	0.372137	UCACAGU	ENSMUST00000085754.3|AI118078|ENSMUSG00000032313.5|expressed sequence AI118078 	ENSMUST00000034862.4|AI118078|ENSMUSG00000032313.5|expressed sequence AI118078
mm10_v2_chr18_-_20896078_20896078	0.371013	UCACAGU	ENSMUST00000025177.6|Trappc8|ENSMUSG00000033382.7|trafficking protein particle complex 8 	ENSMUST00000097658.1|Trappc8|ENSMUSG00000033382.7|trafficking protein particle complex 8
mm10_v2_chr2_+_31640037_31640037	0.369856	UCACAGU	ENSMUST00000113470.2|Prdm12|ENSMUSG00000079466.2|PR domain containing 12
mm10_v2_chr6_+_14901344_14901364	0.369015	UCACAGU	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr9_+_75037614_75037701	0.367112	UCACAGU	ENSMUST00000168166.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19 	ENSMUST00000169492.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19 	ENSMUST00000170308.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr10_-_121476248_121476275	0.36433	UCACAGU	ENSMUST00000026902.7|Rassf3|ENSMUSG00000025795.7|Ras association (RalGDS/AF-6) domain family member 3
mm10_v2_chr7_-_134938264_134938430	0.363175	UCACAGU	ENSMUST00000171394.1|Fam196a|ENSMUSG00000073805.4|family with sequence similarity 196, member A
mm10_v2_chr16_+_44139821_44139900	0.359555	UCACAGU	ENSMUST00000159514.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000161326.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063520.8|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063542.7|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm10_v2_chr11_+_102393403_102393496	0.356849	UCACAGU	ENSMUST00000107105.2|Rundc3a|ENSMUSG00000006575.8|RUN domain containing 3A 	ENSMUST00000107102.1|Rundc3a|ENSMUSG00000006575.8|RUN domain containing 3A 	ENSMUST00000107103.1|Rundc3a|ENSMUSG00000006575.8|RUN domain containing 3A 	ENSMUST00000006750.7|Rundc3a|ENSMUSG00000006575.8|RUN domain containing 3A
mm10_v2_chr15_+_102406143_102406380	0.356668	UCACAGU	ENSMUST00000170884.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000165924.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000163709.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000001326.6|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr15_-_84105662_84105754	0.3533	UCACAGU	ENSMUST00000082365.5|Sult4a1|ENSMUSG00000018865.8|sulfotransferase family 4A, member 1
mm10_v2_chr10_-_67285180_67285316	0.350305	UCACAGU	ENSMUST00000159002.1|Nrbf2|ENSMUSG00000075000.5|nuclear receptor binding factor 2 	ENSMUST00000077839.6|Nrbf2|ENSMUSG00000075000.5|nuclear receptor binding factor 2
mm10_v2_chr19_+_40831248_40831292	0.349108	UCACAGU	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr9_+_72662346_72662412	0.347112	UCACAGU	ENSMUST00000034740.8|Nedd4|ENSMUSG00000032216.8|neural precursor cell expressed, developmentally down-regulated 4
mm10_v2_chr11_-_102185202_102185238	0.343369	UCACAGU	ENSMUST00000107156.2|Lsm12|ENSMUSG00000020922.5|LSM12 homolog (S. cerevisiae)
mm10_v2_chr11_-_85235065_85235137	0.342508	UCACAGU	ENSMUST00000018625.9|Appbp2|ENSMUSG00000018481.9|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm10_v2_chr6_+_66896397_66896479	0.342451	UCACAGU	ENSMUST00000043148.6|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114228.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114227.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114226.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114225.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114224.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12
mm10_v2_chr1_+_51289106_51289142	0.341848	UCACAGU	ENSMUST00000051572.6|Sdpr|ENSMUSG00000045954.6|serum deprivation response
mm10_v2_chr4_+_116221633_116221661	0.34126	UCACAGU	ENSMUST00000030464.7|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr2_+_163994960_163994960	0.34037	UCACAGU	ENSMUST00000018470.3|Ywhab|ENSMUSG00000018326.3|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm10_v2_chr14_-_73049107_73049120	0.338783	UCACAGU	ENSMUST00000044664.4|Cysltr2|ENSMUSG00000033470.5|cysteinyl leukotriene receptor 2 	ENSMUST00000169168.1|Cysltr2|ENSMUSG00000033470.5|cysteinyl leukotriene receptor 2
mm10_v2_chr9_+_7272514_7272537	0.338364	UCACAGU	ENSMUST00000015394.8|Mmp13|ENSMUSG00000050578.9|matrix metallopeptidase 13
mm10_v2_chr7_-_28379247_28379263	0.33452	UCACAGU	ENSMUST00000051241.5|Zfp36|ENSMUSG00000044786.5|zinc finger protein 36
mm10_v2_chr1_+_177444653_177444669	0.334499	UCACAGU	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr3_-_58525867_58525873	0.331851	UCACAGU	ENSMUST00000029385.7|Serp1|ENSMUSG00000027808.7|stress-associated endoplasmic reticulum protein 1
mm10_v2_chr19_-_59943647_59943678	0.327297	UCACAGU	ENSMUST00000171986.1|Rab11fip2|ENSMUSG00000040022.8|RAB11 family interacting protein 2 (class I)
mm10_v2_chr6_+_95117740_95117880	0.326752	UCACAGU	ENSMUST00000032107.7|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8 	ENSMUST00000119582.1|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8
mm10_v2_chr18_+_31759817_31759851	0.3265	UCACAGU	ENSMUST00000115808.2|Ammecr1l|ENSMUSG00000041915.8|AMME chromosomal region gene 1-like
mm10_v2_chr8_-_95807458_95807471	0.3264	UCACAGU	ENSMUST00000098473.4|Cnot1|ENSMUSG00000036550.9|CCR4-NOT transcription complex, subunit 1 	ENSMUST00000068452.8|Cnot1|ENSMUSG00000036550.9|CCR4-NOT transcription complex, subunit 1
mm10_v2_chr3_+_152395991_152396059	0.321363	UCACAGU	ENSMUST00000106100.2|Zzz3|ENSMUSG00000039068.10|zinc finger, ZZ domain containing 3
mm10_v2_chr2_-_39065438_39065503	0.320718	UCACAGU	ENSMUST00000112850.2|Golga1|ENSMUSG00000026754.10|golgi autoantigen, golgin subfamily a, 1
mm10_v2_chr13_+_48261427_48261427	0.319098	UCACAGU	ENSMUST00000021810.1|Id4|ENSMUSG00000021379.1|inhibitor of DNA binding 4
mm10_v2_chr17_-_22361400_22361400	0.315651	UCACAGU	ENSMUST00000115535.2|Zfp944|ENSMUSG00000033972.9|zinc finger protein 944
mm10_v2_chr2_-_103073335_103073513	0.313218	UCACAGU	ENSMUST00000132449.1|Pdhx|ENSMUSG00000010914.4|pyruvate dehydrogenase complex, component X 	ENSMUST00000111183.1|Pdhx|ENSMUSG00000010914.4|pyruvate dehydrogenase complex, component X 	ENSMUST00000011058.2|Pdhx|ENSMUSG00000010914.4|pyruvate dehydrogenase complex, component X
mm10_v2_chr3_+_86224665_86224717	0.311924	UCACAGU	ENSMUST00000107635.1|Lrba|ENSMUSG00000028080.10|LPS-responsive beige-like anchor
mm10_v2_chr2_-_37647199_37647285	0.310917	UCACAGU	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr2_+_38511643_38511814	0.310126	UCACAGU	ENSMUST00000054234.3|Nek6|ENSMUSG00000026749.5|NIMA (never in mitosis gene a)-related expressed kinase 6 	ENSMUST00000112902.1|Nek6|ENSMUSG00000026749.5|NIMA (never in mitosis gene a)-related expressed kinase 6 	ENSMUST00000112895.1|Nek6|ENSMUSG00000026749.5|NIMA (never in mitosis gene a)-related expressed kinase 6
mm10_v2_chr10_-_7956223_7956271	0.310079	UCACAGU	ENSMUST00000146444.1|Tab2|ENSMUSG00000015755.10|TGF-beta activated kinase 1/MAP3K7 binding protein 2
mm10_v2_chr4_-_45530330_45530330	0.30874	UCACAGU	ENSMUST00000061986.5|Shb|ENSMUSG00000044813.9|src homology 2 domain-containing transforming protein B
mm10_v2_chr7_+_120677579_120677630	0.306047	UCACAGU	ENSMUST00000060175.6|BC030336|ENSMUSG00000046096.6|cDNA sequence BC030336
mm10_v2_chr1_+_85793411_85793541	0.304747	UCACAGU	ENSMUST00000113360.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39 	ENSMUST00000126962.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39
mm10_v2_chr18_-_33463615_33463634	0.304487	UCACAGU	ENSMUST00000051087.8|Nrep|ENSMUSG00000042834.8|neuronal regeneration related protein
mm10_v2_chr2_+_30364227_30364260	0.303937	UCACAGU	ENSMUST00000077977.7|Fam73b|ENSMUSG00000026858.12|family with sequence similarity 73, member B 	ENSMUST00000140075.2|Fam73b|ENSMUSG00000026858.12|family with sequence similarity 73, member B
mm10_v2_chr19_-_12501996_12502152	0.300929	UCACAGU	ENSMUST00000045521.7|Dtx4|ENSMUSG00000039982.7|deltex 4 homolog (Drosophila)
mm10_v2_chr11_-_51756378_51756618	0.299215	UCACAGU	ENSMUST00000109092.1|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000064297.4|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000109097.2|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae)
mm10_v2_chr7_+_89404356_89404367	0.298922	UCACAGU	ENSMUST00000058755.3|Fzd4|ENSMUSG00000049791.3|frizzled homolog 4 (Drosophila)
mm10_v2_chr2_+_57237651_57237729	0.298884	UCACAGU	ENSMUST00000169687.1|Gpd2|ENSMUSG00000026827.6|glycerol phosphate dehydrogenase 2, mitochondrial
mm10_v2_chr2_+_29802626_29802647	0.297753	UCACAGU	ENSMUST00000080065.2|Slc27a4|ENSMUSG00000059316.2|solute carrier family 27 (fatty acid transporter), member 4
mm10_v2_chr19_+_3767397_3767523	0.296533	UCACAGU	ENSMUST00000113974.4|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113972.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113973.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113977.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000052699.6|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113968.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr13_-_95375329_95375369	0.296241	UCACAGU	ENSMUST00000022189.8|Aggf1|ENSMUSG00000021681.8|angiogenic factor with G patch and FHA domains 1
mm10_v2_chr16_-_76373827_76373852	0.295975	UCACAGU	ENSMUST00000121927.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr4_+_12089373_12089441	0.294719	UCACAGU	ENSMUST00000095143.2|Rbm12b2|ENSMUSG00000052137.5|RNA binding motif protein 12 B2 	ENSMUST00000063839.5|Rbm12b2|ENSMUSG00000052137.5|RNA binding motif protein 12 B2
mm10_v2_chr9_+_21723576_21723615	0.294093	UCACAGU	ENSMUST00000034713.7|Ldlr|ENSMUSG00000032193.8|low density lipoprotein receptor
mm10_v2_chr11_+_93886157_93886219	0.294069	UCACAGU	ENSMUST00000063718.4|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1 	ENSMUST00000107854.2|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1
mm10_v2_chr1_-_54557595_54557698	0.29217	UCACAGU	ENSMUST00000097739.3|Pgap1|ENSMUSG00000073678.3|post-GPI attachment to proteins 1
mm10_v2_chr11_+_79993062_79993122	0.291749	UCACAGU	ENSMUST00000017692.8|Suz12|ENSMUSG00000017548.9|suppressor of zeste 12 homolog (Drosophila) 	ENSMUST00000163272.1|Suz12|ENSMUSG00000017548.9|suppressor of zeste 12 homolog (Drosophila)
mm10_v2_chr4_-_129672712_129672774	0.291031	UCACAGU	ENSMUST00000102590.4|Kpna6|ENSMUSG00000003731.7|karyopherin (importin) alpha 6
mm10_v2_chr1_-_17097839_17097889	0.289049	UCACAGU	ENSMUST00000038382.4|Jph1|ENSMUSG00000042686.4|junctophilin 1
mm10_v2_chr2_+_60209887_60210073	0.286893	UCACAGU	ENSMUST00000102748.4|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7 	ENSMUST00000102747.1|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7
mm10_v2_chr12_+_81859964_81860036	0.285631	UCACAGU	ENSMUST00000021567.5|Pcnx|ENSMUSG00000021140.8|pecanex homolog (Drosophila)
mm10_v2_chr8_+_46471041_46471078	0.284978	UCACAGU	ENSMUST00000034046.5|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1
mm10_v2_chr8_-_60983215_60983319	0.284458	UCACAGU	ENSMUST00000004430.7|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000110301.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000093490.2|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr3_+_126596951_126596986	0.279828	UCACAGU	ENSMUST00000106402.1|Camk2d|ENSMUSG00000053819.10|calcium/calmodulin-dependent protein kinase II, delta
mm10_v2_chrX_-_106011874_106011906	0.279494	UCACAGU	ENSMUST00000033583.7|Magt1|ENSMUSG00000031232.10|magnesium transporter 1 	ENSMUST00000151689.1|Magt1|ENSMUSG00000031232.10|magnesium transporter 1
mm10_v2_chr2_+_119325784_119325817	0.27591	UCACAGU	ENSMUST00000102517.3|Dll4|ENSMUSG00000027314.6|delta-like 4 (Drosophila)
mm10_v2_chr11_+_23256001_23256105	0.275723	UCACAGU	ENSMUST00000020538.6|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast) 	ENSMUST00000109551.1|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast) 	ENSMUST00000102870.1|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast) 	ENSMUST00000102869.1|Xpo1|ENSMUSG00000020290.8|exportin 1, CRM1 homolog (yeast)
mm10_v2_chr6_+_114282635_114282817	0.275694	UCACAGU	ENSMUST00000032454.5|Slc6a1|ENSMUSG00000030310.8|solute carrier family 6 (neurotransmitter transporter, GABA), member 1
mm10_v2_chr2_-_154892887_154892935	0.273884	UCACAGU	ENSMUST00000099173.4|Eif2s2|ENSMUSG00000074656.6|eukaryotic translation initiation factor 2, subunit 2 (beta)
mm10_v2_chr11_-_97187872_97187926	0.26943	UCACAGU	ENSMUST00000001479.4|Kpnb1|ENSMUSG00000001440.5|karyopherin (importin) beta 1
mm10_v2_chr6_-_18030435_18030585	0.26453	UCACAGU	ENSMUST00000010941.2|Wnt2|ENSMUSG00000010797.2|wingless-related MMTV integration site 2
mm10_v2_chr4_+_123904832_123904851	0.263767	UCACAGU	ENSMUST00000030400.7|Mycbp|ENSMUSG00000028647.7|c-myc binding protein
mm10_v2_chr5_+_150673739_150673827	0.262879	UCACAGU	ENSMUST00000016569.4|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) 	ENSMUST00000038900.8|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
mm10_v2_chr5_-_143732273_143732316	0.2623	UCACAGU	ENSMUST00000053287.5|Usp42|ENSMUSG00000051306.7|ubiquitin specific peptidase 42
mm10_v2_chr11_+_80209019_80209057	0.260854	UCACAGU	ENSMUST00000077451.7|Rhot1|ENSMUSG00000017686.10|ras homolog gene family, member T1 	ENSMUST00000055056.9|Rhot1|ENSMUSG00000017686.10|ras homolog gene family, member T1
mm10_v2_chr5_-_76304474_76304548	0.259755	UCACAGU	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chrX_-_108834303_108834381	0.257508	UCACAGU	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chr3_+_117575227_117575239	0.257355	UCACAGU	ENSMUST00000106473.2|4833424O15Rik|ENSMUSG00000033342.7|RIKEN cDNA 4833424O15 gene
mm10_v2_chr17_-_42876417_42876431	0.255874	UCACAGU	ENSMUST00000024709.7|Cd2ap|ENSMUSG00000061665.6|CD2-associated protein
mm10_v2_chr16_+_27388869_27388980	0.255576	UCACAGU	ENSMUST00000100026.3|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000039443.7|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000096127.4|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50
mm10_v2_chr13_-_95250166_95250336	0.253972	UCACAGU	ENSMUST00000162153.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000160957.2|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000159598.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000162412.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B
mm10_v2_chr8_+_105170668_105170686	0.250194	UCACAGU	ENSMUST00000109395.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000109394.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000052209.2|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000109392.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta
mm10_v2_chr11_-_95587691_95587735	0.248125	UCACAGU	ENSMUST00000000122.6|Ngfr|ENSMUSG00000000120.6|nerve growth factor receptor (TNFR superfamily, member 16)
mm10_v2_chr6_+_7844806_7844859	0.247983	UCACAGU	ENSMUST00000040159.4|C1galt1|ENSMUSG00000042460.4|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
mm10_v2_chr10_-_53379816_53379858	0.245521	UCACAGU	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr11_-_97280626_97280650	0.244421	UCACAGU	ENSMUST00000001480.7|Npepps|ENSMUSG00000001441.7|aminopeptidase puromycin sensitive
mm10_v2_chr18_-_88894322_88894371	0.242549	UCACAGU	ENSMUST00000070116.5|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6 	ENSMUST00000125362.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr10_-_105574435_105574451	0.242162	UCACAGU	ENSMUST00000061506.8|Tmtc2|ENSMUSG00000036019.8|transmembrane and tetratricopeptide repeat containing 2
mm10_v2_chr6_+_122874526_122874573	0.240586	UCACAGU	ENSMUST00000032477.4|Necap1|ENSMUSG00000030327.6|NECAP endocytosis associated 1
mm10_v2_chr2_+_68861433_68861510	0.240146	UCACAGU	ENSMUST00000028426.2|Cers6|ENSMUSG00000027035.4|ceramide synthase 6
mm10_v2_chr15_-_27630644_27630714	0.239198	UCACAGU	ENSMUST00000059662.7|Fam105b|ENSMUSG00000046034.7|family with sequence similarity 105, member B
mm10_v2_chr9_+_25481547_25481612	0.237177	UCACAGU	ENSMUST00000040677.5|Eepd1|ENSMUSG00000036611.5|endonuclease/exonuclease/phosphatase family domain containing 1
mm10_v2_chr4_-_123750236_123750345	0.237097	UCACAGU	ENSMUST00000102636.3|Akirin1|ENSMUSG00000023075.9|akirin 1
mm10_v2_chr6_+_88084473_88084527	0.237075	UCACAGU	ENSMUST00000032143.6|Rpn1|ENSMUSG00000030062.6|ribophorin I
mm10_v2_chr5_-_32854185_32854256	0.235838	UCACAGU	ENSMUST00000130134.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like 	ENSMUST00000120129.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like
mm10_v2_chr2_-_51149100_51149115	0.234868	UCACAGU	ENSMUST00000154545.1|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3 	ENSMUST00000017288.2|Rnd3|ENSMUSG00000017144.2|Rho family GTPase 3
mm10_v2_chr10_+_7832457_7832491	0.234237	UCACAGU	ENSMUST00000039484.4|Zc3h12d|ENSMUSG00000039981.5|zinc finger CCCH type containing 12D
mm10_v2_chr10_+_95515116_95515162	0.233508	UCACAGU	ENSMUST00000099329.3|Ube2n|ENSMUSG00000074781.4|ubiquitin-conjugating enzyme E2N
mm10_v2_chr8_-_24438937_24438952	0.232736	UCACAGU	ENSMUST00000052622.4|1810011O10Rik|ENSMUSG00000056313.4|RIKEN cDNA 1810011O10 gene
mm10_v2_chr18_-_47368830_47368878	0.231079	UCACAGU	ENSMUST00000019791.7|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000115449.2|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr4_+_86053887_86053987	0.230106	UCACAGU	ENSMUST00000107178.2|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1 	ENSMUST00000048885.5|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1 	ENSMUST00000141889.1|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1 	ENSMUST00000120678.1|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1
mm10_v2_chr18_+_8694077_8694077	0.229355	UCACAGU	ENSMUST00000171469.1|Gm5819|ENSMUSG00000092097.1|predicted gene 5819
mm10_v2_chr12_-_4907705_4907754	0.228867	UCACAGU	ENSMUST00000020962.5|Ubxn2a|ENSMUSG00000020634.6|UBX domain protein 2A
mm10_v2_chr16_+_41532999_41533069	0.225333	UCACAGU	ENSMUST00000099761.3|Lsamp|ENSMUSG00000061080.5|limbic system-associated membrane protein
mm10_v2_chr9_-_106789130_106789213	0.224659	UCACAGU	ENSMUST00000046502.5|Rad54l2|ENSMUSG00000040661.5|RAD54 like 2 (S. cerevisiae)
mm10_v2_chr6_-_52260780_52260803	0.224508	UCACAGU	ENSMUST00000114416.1|Hoxa13|ENSMUSG00000038203.12|homeobox A13 	ENSMUST00000147595.3|Hoxa13|ENSMUSG00000038203.12|homeobox A13
mm10_v2_chr11_+_105178765_105178807	0.222702	UCACAGU	ENSMUST00000106939.2|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis)
mm10_v2_chr2_-_130638094_130638113	0.221939	UCACAGU	ENSMUST00000089561.3|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3 	ENSMUST00000110260.1|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3
mm10_v2_chr4_+_126103940_126104020	0.221587	UCACAGU	ENSMUST00000116286.2|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40 	ENSMUST00000094761.4|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40 	ENSMUST00000139524.1|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40
mm10_v2_chr11_-_78697370_78697475	0.221084	UCACAGU	ENSMUST00000142739.1|Nlk|ENSMUSG00000017376.9|nemo like kinase
mm10_v2_chr15_-_103340085_103340100	0.221071	UCACAGU	ENSMUST00000168828.1|Zfp385a|ENSMUSG00000000552.9|zinc finger protein 385A
mm10_v2_chr11_+_93099284_93099331	0.220068	UCACAGU	ENSMUST00000092780.3|Car10|ENSMUSG00000056158.8|carbonic anhydrase 10 	ENSMUST00000107863.2|Car10|ENSMUSG00000056158.8|carbonic anhydrase 10
mm10_v2_chr9_-_59486610_59486621	0.218623	UCACAGU	ENSMUST00000171975.1|Arih1|ENSMUSG00000025234.5|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
mm10_v2_chr13_+_104178797_104178872	0.217841	UCACAGU	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chr17_+_14943184_14943281	0.214497	UCACAGU	ENSMUST00000052691.8|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene 	ENSMUST00000164837.2|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene 	ENSMUST00000174004.1|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene
mm10_v2_chrX_+_107148927_107149072	0.212464	UCACAGU	ENSMUST00000147521.1|A630033H20Rik|ENSMUSG00000054293.4|RIKEN cDNA A630033H20 gene 	ENSMUST00000167673.1|A630033H20Rik|ENSMUSG00000054293.4|RIKEN cDNA A630033H20 gene
mm10_v2_chr1_-_16619437_16619489	0.211939	UCACAGU	ENSMUST00000117146.1|Ube2w|ENSMUSG00000025939.11|ubiquitin-conjugating enzyme E2W (putative)
mm10_v2_chr12_+_95692212_95692246	0.210981	UCACAGU	ENSMUST00000057324.3|Flrt2|ENSMUSG00000047414.6|fibronectin leucine rich transmembrane protein 2
mm10_v2_chr17_+_56990264_56990330	0.208498	UCACAGU	ENSMUST00000002735.7|Clpp|ENSMUSG00000002660.7|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
mm10_v2_chr6_-_142964404_142964452	0.208335	UCACAGU	ENSMUST00000032421.3|St8sia1|ENSMUSG00000030283.5|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
mm10_v2_chr4_-_152318458_152318654	0.20643	UCACAGU	ENSMUST00000170820.1|Rnf207|ENSMUSG00000058498.6|ring finger protein 207 	ENSMUST00000076183.5|Rnf207|ENSMUSG00000058498.6|ring finger protein 207
mm10_v2_chr2_+_32535315_32535359	0.206414	UCACAGU	ENSMUST00000133512.1|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A 	ENSMUST00000048375.5|Fam102a|ENSMUSG00000039157.6|family with sequence similarity 102, member A
mm10_v2_chr1_+_62703285_62703317	0.205042	UCACAGU	ENSMUST00000102822.2|Nrp2|ENSMUSG00000025969.9|neuropilin 2 	ENSMUST00000075144.5|Nrp2|ENSMUSG00000025969.9|neuropilin 2
mm10_v2_chr1_+_64690443_64690467	0.204192	UCACAGU	ENSMUST00000114077.1|Ccnyl1|ENSMUSG00000070871.4|cyclin Y-like 1
mm10_v2_chr19_+_46761578_46761618	0.20414	UCACAGU	ENSMUST00000077666.4|Cnnm2|ENSMUSG00000064105.6|cyclin M2 	ENSMUST00000099373.4|Cnnm2|ENSMUSG00000064105.6|cyclin M2
mm10_v2_chr4_-_133339238_133339271	0.201038	UCACAGU	ENSMUST00000105906.1|Wdtc1|ENSMUSG00000037622.8|WD and tetratricopeptide repeats 1
mm10_v2_chr12_+_8947929_8947980	0.200084	UCACAGU	ENSMUST00000020899.4|Matn3|ENSMUSG00000020583.4|matrilin 3
mm10_v2_chr2_-_161109017_161109027	0.199616	UCACAGU	ENSMUST00000039782.7|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6 	ENSMUST00000134178.1|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6
mm10_v2_chr14_+_46882854_46882973	0.199378	UCACAGU	ENSMUST00000022386.8|Samd4|ENSMUSG00000021838.10|sterile alpha motif domain containing 4 	ENSMUST00000100672.3|Samd4|ENSMUSG00000021838.10|sterile alpha motif domain containing 4
mm10_v2_chr16_+_92058270_92058328	0.19878	UCACAGU	ENSMUST00000047429.8|Mrps6|ENSMUSG00000039680.9|mitochondrial ribosomal protein S6 	ENSMUST00000113975.2|Slc5a3|ENSMUSG00000089774.2|solute carrier family 5 (inositol transporters), member 3
mm10_v2_chr13_-_116309639_116309699	0.197932	UCACAGU	ENSMUST00000036060.6|Isl1|ENSMUSG00000042258.7|ISL1 transcription factor, LIM/homeodomain
mm10_v2_chr7_-_110844350_110844457	0.197592	UCACAGU	ENSMUST00000177462.1|Rnf141|ENSMUSG00000030788.9|ring finger protein 141 	ENSMUST00000176746.1|Rnf141|ENSMUSG00000030788.9|ring finger protein 141 	ENSMUST00000177236.1|Rnf141|ENSMUSG00000030788.9|ring finger protein 141
mm10_v2_chr2_+_168081004_168081035	0.196855	UCACAGU	ENSMUST00000052125.6|Pard6b|ENSMUSG00000044641.7|par-6 (partitioning defective 6) homolog beta (C. elegans)
mm10_v2_chr13_-_8871696_8871749	0.195956	UCACAGU	ENSMUST00000054251.6|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37 	ENSMUST00000176813.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr11_-_103267405_103267472	0.19269	UCACAGU	ENSMUST00000021324.2|Map3k14|ENSMUSG00000020941.7|mitogen-activated protein kinase kinase kinase 14
mm10_v2_chr9_+_58823512_58823512	0.191998	UCACAGU	ENSMUST00000034889.8|Hcn4|ENSMUSG00000032338.8|hyperpolarization-activated, cyclic nucleotide-gated K+ 4
mm10_v2_chr18_+_62977826_62977839	0.191532	UCACAGU	ENSMUST00000025474.6|Napg|ENSMUSG00000024581.6|N-ethylmaleimide sensitive fusion protein attachment protein gamma
mm10_v2_chr17_+_17374332_17374332	0.19048	UCACAGU	ENSMUST00000024620.6|Riok2|ENSMUSG00000023846.10|RIO kinase 2 (yeast)
mm10_v2_chr2_-_120563795_120563878	0.190244	UCACAGU	ENSMUST00000055241.6|Zfp106|ENSMUSG00000027288.10|zinc finger protein 106 	ENSMUST00000135625.1|Zfp106|ENSMUSG00000027288.10|zinc finger protein 106
mm10_v2_chr15_-_77928925_77929011	0.190015	UCACAGU	ENSMUST00000109748.2|Txn2|ENSMUSG00000005354.9|thioredoxin 2 	ENSMUST00000109747.2|Txn2|ENSMUSG00000005354.9|thioredoxin 2 	ENSMUST00000100486.5|Txn2|ENSMUSG00000005354.9|thioredoxin 2 	ENSMUST00000005487.5|Txn2|ENSMUSG00000005354.9|thioredoxin 2
mm10_v2_chr16_-_3872378_3872411	0.186872	UCACAGU	ENSMUST00000090522.4|Zfp597|ENSMUSG00000039789.7|zinc finger protein 597
mm10_v2_chr4_-_53159885_53159900	0.182924	UCACAGU	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr8_+_78509319_78509399	0.182323	UCACAGU	ENSMUST00000034111.8|Slc10a7|ENSMUSG00000031684.10|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm10_v2_chr6_-_58907120_58907131	0.182259	UCACAGU	ENSMUST00000059539.3|Nap1l5|ENSMUSG00000055430.3|nucleosome assembly protein 1-like 5
mm10_v2_chr16_+_38089001_38089064	0.180847	UCACAGU	ENSMUST00000023507.6|Gsk3b|ENSMUSG00000022812.7|glycogen synthase kinase 3 beta
mm10_v2_chr2_-_35200923_35201120	0.18022	UCACAGU	ENSMUST00000028238.8|Rab14|ENSMUSG00000026878.10|RAB14, member RAS oncogene family 	ENSMUST00000113025.1|Rab14|ENSMUSG00000026878.10|RAB14, member RAS oncogene family
mm10_v2_chr17_+_25188380_25188418	0.179329	UCACAGU	ENSMUST00000039734.5|Unkl|ENSMUSG00000015127.8|unkempt-like (Drosophila)
mm10_v2_chr7_+_16309577_16309641	0.179013	UCACAGU	ENSMUST00000002152.6|Bbc3|ENSMUSG00000002083.6|BCL2 binding component 3
mm10_v2_chr12_+_71831064_71831178	0.177798	UCACAGU	ENSMUST00000085299.2|Daam1|ENSMUSG00000034574.9|dishevelled associated activator of morphogenesis 1
mm10_v2_chr8_+_65618009_65618091	0.177361	UCACAGU	ENSMUST00000110258.1|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110256.1|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110255.1|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr9_+_94669876_94669928	0.172805	UCACAGU	ENSMUST00000033463.9|Slc9a9|ENSMUSG00000031129.9|solute carrier family 9 (sodium/hydrogen exchanger), member 9
mm10_v2_chr10_-_58675631_58675654	0.172611	UCACAGU	ENSMUST00000003312.4|Edar|ENSMUSG00000003227.4|ectodysplasin-A receptor
mm10_v2_chr5_+_3543812_3543853	0.171755	UCACAGU	ENSMUST00000115527.3|Fam133b|ENSMUSG00000058503.7|family with sequence similarity 133, member B
mm10_v2_chr17_-_10319324_10319380	0.169606	UCACAGU	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chrX_-_111697069_111697127	0.169059	UCACAGU	ENSMUST00000113422.2|Hdx|ENSMUSG00000034551.6|highly divergent homeobox 	ENSMUST00000038472.5|Hdx|ENSMUSG00000034551.6|highly divergent homeobox
mm10_v2_chr8_-_91313223_91313279	0.168959	UCACAGU	ENSMUST00000047783.7|Rpgrip1l|ENSMUSG00000033282.7|Rpgrip1-like
mm10_v2_chrX_-_155623325_155623325	0.168243	UCACAGU	ENSMUST00000038665.5|Ptchd1|ENSMUSG00000041552.7|patched domain containing 1
mm10_v2_chr12_+_83632208_83632325	0.16692	UCACAGU	ENSMUST00000048155.9|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182618.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000183154.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182036.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182347.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25
mm10_v2_chrX_-_12762069_12762080	0.166844	UCACAGU	ENSMUST00000096495.4|Med14|ENSMUSG00000064127.7|mediator complex subunit 14 	ENSMUST00000076016.5|Med14|ENSMUSG00000064127.7|mediator complex subunit 14
mm10_v2_chr11_-_86544754_86544805	0.166532	UCACAGU	ENSMUST00000138810.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000058286.2|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000154617.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1
mm10_v2_chr4_+_33310306_33310387	0.16623	UCACAGU	ENSMUST00000108153.2|Rngtt|ENSMUSG00000028274.11|RNA guanylyltransferase and 5'-phosphatase 	ENSMUST00000029942.7|Rngtt|ENSMUSG00000028274.11|RNA guanylyltransferase and 5'-phosphatase
mm10_v2_chr1_-_58586191_58586323	0.165731	UCACAGU	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr10_+_52690496_52690554	0.164349	UCACAGU	ENSMUST00000105473.2|Slc35f1|ENSMUSG00000038602.7|solute carrier family 35, member F1
mm10_v2_chr12_+_55598917_55598917	0.164274	UCACAGU	ENSMUST00000051857.3|Insm2|ENSMUSG00000045440.3|insulinoma-associated 2
mm10_v2_chr8_-_27174623_27174651	0.156057	UCACAGU	ENSMUST00000033878.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I) 	ENSMUST00000054212.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I)
mm10_v2_chr11_+_88047693_88047727	0.155943	UCACAGU	ENSMUST00000079866.4|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr4_+_115784799_115784837	0.154433	UCACAGU	ENSMUST00000177280.1|Atpaf1|ENSMUSG00000028710.10|ATP synthase mitochondrial F1 complex assembly factor 1 	ENSMUST00000176047.1|Atpaf1|ENSMUSG00000028710.10|ATP synthase mitochondrial F1 complex assembly factor 1 	ENSMUST00000030478.6|Atpaf1|ENSMUSG00000028710.10|ATP synthase mitochondrial F1 complex assembly factor 1
mm10_v2_chr3_-_32365643_32365691	0.153828	UCACAGU	ENSMUST00000029199.5|Zmat3|ENSMUSG00000027663.6|zinc finger matrin type 3
mm10_v2_chr1_+_74284930_74285072	0.15317	UCACAGU	ENSMUST00000113805.1|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000027370.6|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000087226.4|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia
mm10_v2_chr2_-_162661075_162661147	0.152709	UCACAGU	ENSMUST00000109442.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109445.2|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109443.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109441.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T
mm10_v2_chr4_-_82505749_82505802	0.147683	UCACAGU	ENSMUST00000107245.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107246.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr4_-_22488296_22488366	0.144816	UCACAGU	ENSMUST00000178174.1|Pou3f2|ENSMUSG00000095139.1|POU domain, class 3, transcription factor 2
mm10_v2_chr4_+_54947976_54948054	0.144773	UCACAGU	ENSMUST00000098070.3|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chr16_-_10993100_10993121	0.144192	UCACAGU	ENSMUST00000023143.7|Litaf|ENSMUSG00000022500.8|LPS-induced TN factor
mm10_v2_chr16_-_96127604_96127736	0.143305	UCACAGU	ENSMUST00000133885.1|Hmgn1|ENSMUSG00000040681.8|high mobility group nucleosomal binding domain 1 	ENSMUST00000050884.7|Hmgn1|ENSMUSG00000040681.8|high mobility group nucleosomal binding domain 1
mm10_v2_chr18_-_9450097_9450161	0.1425	UCACAGU	ENSMUST00000053917.4|Ccny|ENSMUSG00000024286.7|cyclin Y
mm10_v2_chr9_+_95559817_95559960	0.140196	UCACAGU	ENSMUST00000079597.5|Paqr9|ENSMUSG00000064225.5|progestin and adipoQ receptor family member IX
mm10_v2_chr5_-_107289561_107289637	0.135942	UCACAGU	ENSMUST00000031224.8|Tgfbr3|ENSMUSG00000029287.8|transforming growth factor, beta receptor III
mm10_v2_chr2_-_39190687_39190746	0.13499	UCACAGU	ENSMUST00000142872.1|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion 	ENSMUST00000038874.5|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion
mm10_v2_chr2_+_48814109_48814173	0.134529	UCACAGU	ENSMUST00000063886.3|Acvr2a|ENSMUSG00000052155.5|activin receptor IIA
mm10_v2_chr8_+_40307458_40307458	0.134462	UCACAGU	ENSMUST00000068999.7|Micu3|ENSMUSG00000039478.9|mitochondrial calcium uptake family, member 3
mm10_v2_chr7_-_73541738_73541758	0.134149	UCACAGU	ENSMUST00000169922.2|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr5_-_24447587_24447854	0.133909	UCACAGU	ENSMUST00000127194.1|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1 	ENSMUST00000115033.1|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1 	ENSMUST00000123167.1|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1 	ENSMUST00000030799.8|Tmub1|ENSMUSG00000028958.8|transmembrane and ubiquitin-like domain containing 1
mm10_v2_chr2_-_23572038_23572112	0.13373	UCACAGU	ENSMUST00000132484.1|Spopl|ENSMUSG00000026771.8|speckle-type POZ protein-like
mm10_v2_chr7_+_57590503_57590523	0.132713	UCACAGU	ENSMUST00000085240.4|Gabrb3|ENSMUSG00000033676.7|gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
mm10_v2_chr8_-_11478618_11478668	0.129401	UCACAGU	ENSMUST00000033900.5|Rab20|ENSMUSG00000031504.5|RAB20, member RAS oncogene family
mm10_v2_chr11_-_76846968_76847045	0.12893	UCACAGU	ENSMUST00000021201.5|Cpd|ENSMUSG00000020841.5|carboxypeptidase D
mm10_v2_chr12_-_80112998_80113019	0.128793	UCACAGU	ENSMUST00000165114.1|Zfp36l1|ENSMUSG00000021127.6|zinc finger protein 36, C3H type-like 1 	ENSMUST00000021552.1|Zfp36l1|ENSMUSG00000021127.6|zinc finger protein 36, C3H type-like 1
mm10_v2_chr16_-_50432340_50432409	0.128555	UCACAGU	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr12_-_3426700_3426782	0.128476	UCACAGU	ENSMUST00000180149.1|1110002L01Rik|ENSMUSG00000071456.2|RIKEN cDNA 1110002L01 gene
mm10_v2_chr2_-_58357752_58357895	0.127332	UCACAGU	ENSMUST00000112608.2|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC 	ENSMUST00000112607.2|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC 	ENSMUST00000028178.7|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC
mm10_v2_chr12_-_59219725_59219776	0.126212	UCACAGU	ENSMUST00000043204.7|Fbxo33|ENSMUSG00000035329.7|F-box protein 33
mm10_v2_chr11_+_87592145_87592229	0.123638	UCACAGU	ENSMUST00000103179.3|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4 	ENSMUST00000092802.5|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4 	ENSMUST00000146871.1|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4
mm10_v2_chr10_+_69533761_69533776	0.122161	UCACAGU	ENSMUST00000182884.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr1_-_161876656_161876682	0.121227	UCACAGU	ENSMUST00000048377.5|Suco|ENSMUSG00000040297.7|SUN domain containing ossification factor
mm10_v2_chr5_+_118169712_118169748	0.120421	UCACAGU	ENSMUST00000054836.6|Hrk|ENSMUSG00000046607.6|harakiri, BCL2 interacting protein (contains only BH3 domain)
mm10_v2_chr3_-_154330543_154330576	0.120282	UCACAGU	ENSMUST00000184966.1|Lhx8|ENSMUSG00000096225.2|LIM homeobox protein 8 	ENSMUST00000177846.2|Lhx8|ENSMUSG00000096225.2|LIM homeobox protein 8
mm10_v2_chr2_+_69722797_69722840	0.120039	UCACAGU	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr9_-_98033181_98033207	0.119284	UCACAGU	ENSMUST00000035027.6|Clstn2|ENSMUSG00000032452.6|calsyntenin 2
mm10_v2_chr2_-_104494400_104494463	0.118227	UCACAGU	ENSMUST00000028600.7|Hipk3|ENSMUSG00000027177.8|homeodomain interacting protein kinase 3
mm10_v2_chr4_+_101419277_101419332	0.117756	UCACAGU	ENSMUST00000102780.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106946.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106945.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4
mm10_v2_chr1_-_88702121_88702221	0.117591	UCACAGU	ENSMUST00000159814.1|Arl4c|ENSMUSG00000049866.6|ADP-ribosylation factor-like 4C
mm10_v2_chr1_+_60977898_60977937	0.116134	UCACAGU	ENSMUST00000027162.5|Icos|ENSMUSG00000026009.8|inducible T cell co-stimulator 	ENSMUST00000102827.3|Icos|ENSMUSG00000026009.8|inducible T cell co-stimulator
mm10_v2_chr10_+_88379217_88379299	0.115669	UCACAGU	ENSMUST00000130301.1|Gnptab|ENSMUSG00000035311.10|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits 	ENSMUST00000020251.8|Gnptab|ENSMUSG00000035311.10|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
mm10_v2_chr19_+_46599081_46599150	0.1149	UCACAGU	ENSMUST00000138302.2|Wbp1l|ENSMUSG00000047731.11|WW domain binding protein 1 like 	ENSMUST00000099376.4|Wbp1l|ENSMUSG00000047731.11|WW domain binding protein 1 like
mm10_v2_chr1_-_158958367_158958367	0.1137	UCACAGU	ENSMUST00000159861.2|Pappa2|ENSMUSG00000073530.5|pappalysin 2
mm10_v2_chr6_-_145250177_145250259	0.112777	UCACAGU	ENSMUST00000111710.1|Kras|ENSMUSG00000030265.8|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 	ENSMUST00000155145.1|Kras|ENSMUSG00000030265.8|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 	ENSMUST00000032399.5|Kras|ENSMUSG00000030265.8|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog
mm10_v2_chr15_-_38078842_38078860	0.108628	UCACAGU	ENSMUST00000110336.2|Ubr5|ENSMUSG00000037487.6|ubiquitin protein ligase E3 component n-recognin 5
mm10_v2_chrX_-_103981242_103981287	0.108299	UCACAGU	ENSMUST00000121153.1|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting 	ENSMUST00000070705.4|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting
mm10_v2_chr13_+_37826225_37826315	0.108293	UCACAGU	ENSMUST00000128570.1|Rreb1|ENSMUSG00000039087.10|ras responsive element binding protein 1
mm10_v2_chr2_+_157279026_157279064	0.108179	UCACAGU	ENSMUST00000116380.2|Rpn2|ENSMUSG00000027642.9|ribophorin II
mm10_v2_chr12_-_110696332_110696418	0.107993	UCACAGU	ENSMUST00000094361.4|Hsp90aa1|ENSMUSG00000021270.7|heat shock protein 90, alpha (cytosolic), class A member 1
mm10_v2_chr12_-_26415256_26415303	0.107394	UCACAGU	ENSMUST00000020971.6|Rnf144a|ENSMUSG00000020642.6|ring finger protein 144A 	ENSMUST00000062149.4|Rnf144a|ENSMUSG00000020642.6|ring finger protein 144A
mm10_v2_chr2_+_90940397_90940543	0.107239	UCACAGU	ENSMUST00000068726.6|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000005643.7|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000177642.1|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000111451.3|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000068747.7|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1
mm10_v2_chr2_-_20968881_20968957	0.102067	UCACAGU	ENSMUST00000114594.1|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr16_-_4997782_4997852	0.100393	UCACAGU	ENSMUST00000170323.2|Sept12|ENSMUSG00000022542.6|septin 12
mm10_v2_chr5_+_88720855_88720876	0.0987235	UCACAGU	ENSMUST00000113229.1|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B 	ENSMUST00000006424.7|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B
mm10_v2_chr18_+_76241580_76241741	0.0986549	UCACAGU	ENSMUST00000168423.1|Smad2|ENSMUSG00000024563.9|SMAD family member 2 	ENSMUST00000091831.6|Smad2|ENSMUSG00000024563.9|SMAD family member 2
mm10_v2_chr1_+_93803945_93803998	0.0986364	UCACAGU	ENSMUST00000027505.6|Ing5|ENSMUSG00000026283.7|inhibitor of growth family, member 5
mm10_v2_chr1_-_131527302_131527385	0.0986128	UCACAGU	ENSMUST00000097588.2|Srgap2|ENSMUSG00000026425.9|SLIT-ROBO Rho GTPase activating protein 2
mm10_v2_chr17_+_30005029_30005098	0.0979092	UCACAGU	ENSMUST00000057897.7|Zfand3|ENSMUSG00000044477.10|zinc finger, AN1-type domain 3
mm10_v2_chr4_+_126753770_126753835	0.0974008	UCACAGU	ENSMUST00000102607.3|AU040320|ENSMUSG00000028830.8|expressed sequence AU040320 	ENSMUST00000047431.4|AU040320|ENSMUSG00000028830.8|expressed sequence AU040320 	ENSMUST00000132660.1|AU040320|ENSMUSG00000028830.8|expressed sequence AU040320
mm10_v2_chr8_+_46163651_46163729	0.0942521	UCACAGU	ENSMUST00000034048.6|4933411K20Rik|ENSMUSG00000031631.9|RIKEN cDNA 4933411K20 gene 	ENSMUST00000145229.1|4933411K20Rik|ENSMUSG00000031631.9|RIKEN cDNA 4933411K20 gene
mm10_v2_chr8_+_25602236_25602315	0.0941957	UCACAGU	ENSMUST00000146919.1|Whsc1l1|ENSMUSG00000054823.9|Wolf-Hirschhorn syndrome candidate 1-like 1 (human) 	ENSMUST00000142395.1|Whsc1l1|ENSMUSG00000054823.9|Wolf-Hirschhorn syndrome candidate 1-like 1 (human) 	ENSMUST00000139966.1|Whsc1l1|ENSMUSG00000054823.9|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
mm10_v2_chrX_-_165327376_165327421	0.0933324	UCACAGU	ENSMUST00000058787.8|Glra2|ENSMUSG00000018589.8|glycine receptor, alpha 2 subunit
mm10_v2_chr5_+_130219706_130219744	0.0929802	UCACAGU	ENSMUST00000065329.6|Tmem248|ENSMUSG00000053094.9|transmembrane protein 248
mm10_v2_chr18_+_40258361_40258361	0.0928833	UCACAGU	ENSMUST00000091927.4|Kctd16|ENSMUSG00000051401.6|potassium channel tetramerisation domain containing 16
mm10_v2_chr5_+_65537209_65537233	0.092847	UCACAGU	ENSMUST00000142407.1|Ube2k|ENSMUSG00000029203.10|ubiquitin-conjugating enzyme E2K
mm10_v2_chr14_+_120275669_120275714	0.0927668	UCACAGU	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chr11_-_5741141_5741182	0.0916783	UCACAGU	ENSMUST00000140922.1|Urgcp|ENSMUSG00000049680.11|upregulator of cell proliferation 	ENSMUST00000093362.5|Urgcp|ENSMUSG00000049680.11|upregulator of cell proliferation
mm10_v2_chr3_+_103058302_103058352	0.0911733	UCACAGU	ENSMUST00000029445.6|Nras|ENSMUSG00000027852.8|neuroblastoma ras oncogene
mm10_v2_chr12_-_91590009_91590056	0.0911244	UCACAGU	ENSMUST00000021345.6|Gtf2a1|ENSMUSG00000020962.7|general transcription factor II A, 1
mm10_v2_chr11_+_105967938_105967956	0.0878408	UCACAGU	ENSMUST00000001963.7|Ace|ENSMUSG00000020681.8|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
mm10_v2_chr5_+_114568016_114568016	0.0848032	UCACAGU	ENSMUST00000043650.7|Fam222a|ENSMUSG00000041930.7|family with sequence similarity 222, member A
mm10_v2_chr12_-_14152038_14152069	0.0845907	UCACAGU	ENSMUST00000020926.6|Fam84a|ENSMUSG00000020607.6|family with sequence similarity 84, member A
mm10_v2_chr8_+_104101625_104101650	0.0831477	UCACAGU	ENSMUST00000034339.8|Cdh5|ENSMUSG00000031871.8|cadherin 5
mm10_v2_chr6_-_100287441_100287465	0.0829366	UCACAGU	ENSMUST00000101118.2|Rybp|ENSMUSG00000072872.2|RING1 and YY1 binding protein
mm10_v2_chr6_+_87042838_87042918	0.0802258	UCACAGU	ENSMUST00000113658.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000113657.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000113655.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000032057.7|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1
mm10_v2_chr14_-_100149764_100149764	0.0789147	UCACAGU	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr7_-_47008397_47008421	0.0785197	UCACAGU	ENSMUST00000061639.7|Spty2d1|ENSMUSG00000049516.7|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
mm10_v2_chr1_+_57406328_57406328	0.0767049	UCACAGU	ENSMUST00000027114.5|9430016H08Rik|ENSMUSG00000025971.5|RIKEN cDNA 9430016H08 gene
mm10_v2_chr16_-_9994921_9995012	0.0765298	UCACAGU	ENSMUST00000115835.1|Grin2a|ENSMUSG00000059003.6|glutamate receptor, ionotropic, NMDA2A (epsilon 1)
mm10_v2_chr11_-_120991305_120991339	0.0760518	UCACAGU	ENSMUST00000018274.3|Csnk1d|ENSMUSG00000025162.11|casein kinase 1, delta
mm10_v2_chr11_-_86357570_86357614	0.0747003	UCACAGU	ENSMUST00000043624.8|Med13|ENSMUSG00000034297.8|mediator complex subunit 13
mm10_v2_chr7_-_110614761_110614928	0.0715438	UCACAGU	ENSMUST00000166020.1|Sbf2|ENSMUSG00000038371.8|SET binding factor 2 	ENSMUST00000171218.1|Sbf2|ENSMUSG00000038371.8|SET binding factor 2 	ENSMUST00000033058.7|Sbf2|ENSMUSG00000038371.8|SET binding factor 2 	ENSMUST00000164759.1|Sbf2|ENSMUSG00000038371.8|SET binding factor 2
mm10_v2_chr5_+_76588663_76588742	0.0700708	UCACAGU	ENSMUST00000121979.1|Cep135|ENSMUSG00000036403.9|centrosomal protein 135
mm10_v2_chr14_-_124677089_124677127	0.0674033	UCACAGU	ENSMUST00000095529.3|Fgf14|ENSMUSG00000025551.7|fibroblast growth factor 14
mm10_v2_chr9_-_104262900_104262949	0.0667469	UCACAGU	ENSMUST00000035170.6|Dnajc13|ENSMUSG00000032560.7|DnaJ (Hsp40) homolog, subfamily C, member 13
mm10_v2_chr19_+_25610533_25610553	0.0666588	UCACAGU	ENSMUST00000048935.4|Dmrt3|ENSMUSG00000042372.4|doublesex and mab-3 related transcription factor 3
mm10_v2_chr13_+_75707484_75707510	0.0660459	UCACAGU	ENSMUST00000001583.6|Ell2|ENSMUSG00000001542.6|elongation factor RNA polymerase II 2
mm10_v2_chr16_-_35490873_35490891	0.065711	UCACAGU	ENSMUST00000023550.7|Pdia5|ENSMUSG00000022844.7|protein disulfide isomerase associated 5
mm10_v2_chr7_-_57387172_57387222	0.0656263	UCACAGU	ENSMUST00000068911.6|Gabrg3|ENSMUSG00000055026.7|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3
mm10_v2_chr18_-_21300129_21300168	0.0655762	UCACAGU	ENSMUST00000049260.6|Garem|ENSMUSG00000042680.7|GRB2 associated, regulator of MAPK1
mm10_v2_chr11_-_103697898_103697948	0.0651504	UCACAGU	ENSMUST00000021329.7|Gosr2|ENSMUSG00000020946.7|golgi SNAP receptor complex member 2
mm10_v2_chr2_-_85196697_85196708	0.0630801	UCACAGU	ENSMUST00000099930.2|Lrrc55|ENSMUSG00000075224.2|leucine rich repeat containing 55 	ENSMUST00000111601.1|Lrrc55|ENSMUSG00000075224.2|leucine rich repeat containing 55
mm10_v2_chr13_-_98891036_98891063	0.062928	UCACAGU	ENSMUST00000109399.2|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr1_-_55088024_55088102	0.0621027	UCACAGU	ENSMUST00000027123.8|Hspd1|ENSMUSG00000025980.8|heat shock protein 1 (chaperonin)
mm10_v2_chr14_+_75955003_75955016	0.0619824	UCACAGU	ENSMUST00000050120.2|Kctd4|ENSMUSG00000046523.4|potassium channel tetramerisation domain containing 4
mm10_v2_chr10_-_81025406_81025411	0.0604317	UCACAGU	ENSMUST00000055125.4|Diras1|ENSMUSG00000043670.4|DIRAS family, GTP-binding RAS-like 1
mm10_v2_chr10_+_43479140_43479194	0.0599671	UCACAGU	ENSMUST00000167488.1|Bend3|ENSMUSG00000038214.8|BEN domain containing 3 	ENSMUST00000040147.7|Bend3|ENSMUSG00000038214.8|BEN domain containing 3
mm10_v2_chr11_-_101119814_101119849	0.0577872	UCACAGU	ENSMUST00000107295.3|Fam134c|ENSMUSG00000017802.8|family with sequence similarity 134, member C
mm10_v2_chr4_+_59189240_59189257	0.0564937	UCACAGU	ENSMUST00000030074.7|Ugcg|ENSMUSG00000028381.8|UDP-glucose ceramide glucosyltransferase
mm10_v2_chr10_+_96616998_96617015	0.0560869	UCACAGU	ENSMUST00000038377.7|Btg1|ENSMUSG00000036478.7|B cell translocation gene 1, anti-proliferative
mm10_v2_chr1_-_152090308_152090332	0.0539526	UCACAGU	ENSMUST00000044581.7|1700025G04Rik|ENSMUSG00000032666.10|RIKEN cDNA 1700025G04 gene
mm10_v2_chr8_-_22593813_22593828	0.0537433	UCACAGU	ENSMUST00000009036.3|Vdac3|ENSMUSG00000008892.5|voltage-dependent anion channel 3 	ENSMUST00000179233.1|Vdac3|ENSMUSG00000008892.5|voltage-dependent anion channel 3
mm10_v2_chr3_-_96905294_96905346	0.0499531	UCACAGU	ENSMUST00000029738.7|Gpr89|ENSMUSG00000028096.7|G protein-coupled receptor 89
mm10_v2_chr11_-_66525964_66525964	0.0491904	UCACAGU	ENSMUST00000066679.6|Shisa6|ENSMUSG00000053930.7|shisa homolog 6 (Xenopus laevis)
mm10_v2_chr9_-_59036387_59036460	0.04899	UCACAGU	ENSMUST00000068664.5|Neo1|ENSMUSG00000032340.7|neogenin
mm10_v2_chr14_-_122465677_122465677	0.048282	UCACAGU	ENSMUST00000039118.6|Zic5|ENSMUSG00000041703.7|zinc finger protein of the cerebellum 5
mm10_v2_chrX_+_101299143_101299201	0.0477048	UCACAGU	ENSMUST00000118111.1|Nlgn3|ENSMUSG00000031302.10|neuroligin 3 	ENSMUST00000130555.1|Nlgn3|ENSMUSG00000031302.10|neuroligin 3 	ENSMUST00000151528.1|Nlgn3|ENSMUSG00000031302.10|neuroligin 3
mm10_v2_chr1_-_14310198_14310218	0.04731	UCACAGU	ENSMUST00000168081.2|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila) 	ENSMUST00000027066.6|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila)
mm10_v2_chr1_-_56972437_56972502	0.0453412	UCACAGU	ENSMUST00000042857.7|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr3_-_88425094_88425139	0.0451328	UCACAGU	ENSMUST00000168755.1|Slc25a44|ENSMUSG00000050144.7|solute carrier family 25, member 44 	ENSMUST00000057935.6|Slc25a44|ENSMUSG00000050144.7|solute carrier family 25, member 44
mm10_v2_chr17_+_73804841_73804871	0.0421944	UCACAGU	ENSMUST00000024860.7|Ehd3|ENSMUSG00000024065.7|EH-domain containing 3
mm10_v2_chr3_+_52268337_52268388	0.0421077	UCACAGU	ENSMUST00000053764.5|Foxo1|ENSMUSG00000044167.5|forkhead box O1
mm10_v2_chr18_-_72351029_72351073	0.0420004	UCACAGU	ENSMUST00000114943.3|Dcc|ENSMUSG00000060534.9|deleted in colorectal carcinoma
mm10_v2_chr12_+_4917376_4917438	0.0416391	UCACAGU	ENSMUST00000045664.5|Atad2b|ENSMUSG00000052812.4|ATPase family, AAA domain containing 2B
mm10_v2_chr10_+_127739516_127739592	0.0414557	UCACAGU	ENSMUST00000054287.7|Zbtb39|ENSMUSG00000044617.7|zinc finger and BTB domain containing 39
mm10_v2_chr4_+_21776261_21776297	0.0412745	UCACAGU	ENSMUST00000065111.8|Usp45|ENSMUSG00000040455.11|ubiquitin specific petidase 45 	ENSMUST00000040429.5|Usp45|ENSMUSG00000040455.11|ubiquitin specific petidase 45 	ENSMUST00000148304.1|Usp45|ENSMUSG00000040455.11|ubiquitin specific petidase 45
mm10_v2_chrX_-_105929397_105929408	0.0386857	UCACAGU	ENSMUST00000113573.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000130980.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chr8_-_29219338_29219338	0.0382468	UCACAGU	ENSMUST00000168630.2|Unc5d|ENSMUSG00000063626.5|unc-5 homolog D (C. elegans)
mm10_v2_chr13_-_96670838_96670936	0.0378938	UCACAGU	ENSMUST00000022176.8|Hmgcr|ENSMUSG00000021670.8|3-hydroxy-3-methylglutaryl-Coenzyme A reductase
mm10_v2_chr7_-_137314394_137314445	0.036937	UCACAGU	ENSMUST00000168203.1|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000106118.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000169486.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000033378.5|Ebf3|ENSMUSG00000010476.7|early B cell factor 3
mm10_v2_chr6_+_113077354_113077382	0.0366858	UCACAGU	ENSMUST00000042889.5|Setd5|ENSMUSG00000034269.6|SET domain containing 5
mm10_v2_chr7_+_122289297_122289347	0.0361471	UCACAGU	ENSMUST00000064989.5|Prkcb|ENSMUSG00000052889.5|protein kinase C, beta 	ENSMUST00000064921.4|Prkcb|ENSMUSG00000052889.5|protein kinase C, beta
mm10_v2_chr6_-_55681257_55681271	0.0348915	UCACAGU	ENSMUST00000044767.8|Neurod6|ENSMUSG00000037984.8|neurogenic differentiation 6
mm10_v2_chr7_-_123500449_123500578	0.0343968	UCACAGU	ENSMUST00000042470.7|Zkscan2|ENSMUSG00000030757.7|zinc finger with KRAB and SCAN domains 2 	ENSMUST00000128217.1|Zkscan2|ENSMUSG00000030757.7|zinc finger with KRAB and SCAN domains 2
mm10_v2_chr8_-_40511663_40511756	0.0343694	UCACAGU	ENSMUST00000135269.1|Cnot7|ENSMUSG00000031601.10|CCR4-NOT transcription complex, subunit 7 	ENSMUST00000034012.3|Cnot7|ENSMUSG00000031601.10|CCR4-NOT transcription complex, subunit 7
mm10_v2_chr1_-_155742120_155742136	0.0320125	UCACAGU	ENSMUST00000027740.7|Lhx4|ENSMUSG00000026468.8|LIM homeobox protein 4
mm10_v2_chr7_+_122067164_122067216	0.0315925	UCACAGU	ENSMUST00000033158.4|Ubfd1|ENSMUSG00000030870.6|ubiquitin family domain containing 1
mm10_v2_chrX_-_134541847_134541900	0.0314461	UCACAGU	ENSMUST00000054213.4|Timm8a1|ENSMUSG00000048007.4|translocase of inner mitochondrial membrane 8A1
mm10_v2_chr8_-_57653023_57653039	0.0285024	UCACAGU	ENSMUST00000034021.5|Galnt7|ENSMUSG00000031608.7|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
mm10_v2_chr2_-_80128834_80128996	0.0278068	UCACAGU	ENSMUST00000102654.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102655.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr9_-_52679429_52679429	0.0261145	UCACAGU	ENSMUST00000098768.2|AI593442|ENSMUSG00000078307.2|expressed sequence AI593442
mm10_v2_chr3_-_119783262_119783388	0.0256332	UCACAGU	ENSMUST00000029780.7|Ptbp2|ENSMUSG00000028134.7|polypyrimidine tract binding protein 2
mm10_v2_chr4_+_120854786_120854843	0.0242633	UCACAGU	ENSMUST00000071093.2|Rims3|ENSMUSG00000032890.11|regulating synaptic membrane exocytosis 3
mm10_v2_chr7_-_68749170_68749241	0.0226015	UCACAGU	ENSMUST00000118110.1|Arrdc4|ENSMUSG00000042659.8|arrestin domain containing 4 	ENSMUST00000048068.7|Arrdc4|ENSMUSG00000042659.8|arrestin domain containing 4
mm10_v2_chr8_-_69996326_69996379	0.0211692	UCACAGU	ENSMUST00000177851.1|Gatad2a|ENSMUSG00000036180.8|GATA zinc finger domain containing 2A 	ENSMUST00000065169.4|Gatad2a|ENSMUSG00000036180.8|GATA zinc finger domain containing 2A
mm10_v2_chr17_+_28691342_28691399	0.0208979	UCACAGU	ENSMUST00000114758.1|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000004990.6|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000062694.8|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000114754.1|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14
mm10_v2_chr9_+_13662460_13662460	0.0190047	UCACAGU	ENSMUST00000177755.1|Maml2|ENSMUSG00000031925.10|mastermind like 2 (Drosophila)
mm10_v2_chr7_+_141949982_141950086	0.0172499	UCACAGU	ENSMUST00000105989.2|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000075528.5|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000174499.1|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2
mm10_v2_chr15_+_102954427_102954427	0.0171174	UCACAGU	ENSMUST00000001701.3|Hoxc11|ENSMUSG00000001656.3|homeobox C11
mm10_v2_chr14_+_60634719_60634776	0.0157339	UCACAGU	ENSMUST00000022566.7|Spata13|ENSMUSG00000021990.9|spermatogenesis associated 13 	ENSMUST00000159729.1|Spata13|ENSMUSG00000021990.9|spermatogenesis associated 13
mm10_v2_chr11_+_17159263_17159357	0.0136194	UCACAGU	ENSMUST00000102880.4|Ppp3r1|ENSMUSG00000033953.10|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm10_v2_chr11_-_79254663_79254685	0.0125594	UCACAGU	ENSMUST00000017821.5|Wsb1|ENSMUSG00000017677.5|WD repeat and SOCS box-containing 1
mm10_v2_chr8_-_85690973_85690973	0.0113479	UCACAGU	ENSMUST00000109686.3|Neto2|ENSMUSG00000036902.9|neuropilin (NRP) and tolloid (TLL)-like 2
mm10_v2_chr3_-_104864420_104864505	0.00998612	UCACAGU	ENSMUST00000094028.5|Capza1|ENSMUSG00000070372.7|capping protein (actin filament) muscle Z-line, alpha 1
mm10_v2_chr13_-_100104064_100104082	0.0076774	UCACAGU	ENSMUST00000038104.5|Bdp1|ENSMUSG00000049658.7|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
mm10_v2_chr14_+_25694170_25694233	0.00755744	UCACAGU	ENSMUST00000022419.6|Ppif|ENSMUSG00000021868.6|peptidylprolyl isomerase F (cyclophilin F)
mm10_v2_chr6_-_71632897_71632947	0.00578932	UCACAGU	ENSMUST00000065509.4|Kdm3a|ENSMUSG00000053470.7|lysine (K)-specific demethylase 3A
mm10_v2_chr19_-_6987621_6987764	0.00378309	UCACAGU	ENSMUST00000130048.1|Vegfb|ENSMUSG00000024962.7|vascular endothelial growth factor B 	ENSMUST00000025914.6|Vegfb|ENSMUSG00000024962.7|vascular endothelial growth factor B
mm10_v2_chr8_-_36249292_36249516	0.00260665	UCACAGU	ENSMUST00000065297.5|Lonrf1|ENSMUSG00000039633.6|LON peptidase N-terminal domain and ring finger 1
mm10_v2_chr7_-_27228605_27228636	0.00144348	UCACAGU	ENSMUST00000003850.7|Itpkc|ENSMUSG00000003752.8|inositol 1,4,5-trisphosphate 3-kinase C
mm10_v2_chr18_-_34007206_34007361	0.000613439	UCACAGU	ENSMUST00000025234.5|Epb4.1l4a|ENSMUSG00000024376.6|erythrocyte protein band 4.1-like 4a
mm10_v2_chr16_+_33185045_33185153	6.57505e-05	UCACAGU	ENSMUST00000039733.8|Osbpl11|ENSMUSG00000022807.8|oxysterol binding protein-like 11
