mm10_v2_chr3_-_18243289_18243349	4.26765	UAUUGCU	ENSMUST00000035625.6|Cyp7b1|ENSMUSG00000039519.6|cytochrome P450, family 7, subfamily b, polypeptide 1
mm10_v2_chr17_+_36942910_36942924	2.86244	UAUUGCU	ENSMUST00000040498.5|Rnf39|ENSMUSG00000036492.6|ring finger protein 39
mm10_v2_chr10_-_109010955_109010983	2.5592	UAUUGCU	ENSMUST00000105276.1|Syt1|ENSMUSG00000035864.8|synaptotagmin I 	ENSMUST00000064054.7|Syt1|ENSMUSG00000035864.8|synaptotagmin I
mm10_v2_chr18_+_51117754_51117898	2.02345	UAUUGCU	ENSMUST00000116639.2|Prr16|ENSMUSG00000073565.4|proline rich 16
mm10_v2_chr7_-_99626936_99627103	1.88181	UAUUGCU	ENSMUST00000178124.1|Gm4980|ENSMUSG00000096606.1|predicted gene 4980
mm10_v2_chr14_+_8002890_8002946	1.72251	UAUUGCU	ENSMUST00000166497.1|Abhd6|ENSMUSG00000025277.7|abhydrolase domain containing 6
mm10_v2_chr1_-_51915968_51916071	1.70732	UAUUGCU	ENSMUST00000046390.7|Myo1b|ENSMUSG00000018417.8|myosin IB
mm10_v2_chr5_+_130448801_130448830	1.59423	UAUUGCU	ENSMUST00000111288.2|Caln1|ENSMUSG00000060371.6|calneuron 1
mm10_v2_chr3_-_89322883_89322965	1.54213	UAUUGCU	ENSMUST00000029673.5|Efna3|ENSMUSG00000028039.7|ephrin A3
mm10_v2_chr4_-_46991842_46991916	1.41662	UAUUGCU	ENSMUST00000107749.2|Gabbr2|ENSMUSG00000039809.9|gamma-aminobutyric acid (GABA) B receptor, 2
mm10_v2_chr8_+_128359065_128359085	1.39241	UAUUGCU	ENSMUST00000026917.8|Nrp1|ENSMUSG00000025810.8|neuropilin 1
mm10_v2_chr5_+_119670825_119670862	1.32645	UAUUGCU	ENSMUST00000121021.1|Tbx3|ENSMUSG00000018604.12|T-box 3
mm10_v2_chr11_-_61855026_61855073	1.24546	UAUUGCU	ENSMUST00000004920.3|Ulk2|ENSMUSG00000004798.8|unc-51 like kinase 2
mm10_v2_chr9_-_70141484_70141578	1.17567	UAUUGCU	ENSMUST00000034749.8|Fam81a|ENSMUSG00000032224.8|family with sequence similarity 81, member A
mm10_v2_chr14_+_17660956_17660963	1.16413	UAUUGCU	ENSMUST00000022303.7|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta 	ENSMUST00000091471.4|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta
mm10_v2_chr18_-_39490649_39490717	1.14179	UAUUGCU	ENSMUST00000115567.1|Nr3c1|ENSMUSG00000024431.8|nuclear receptor subfamily 3, group C, member 1
mm10_v2_chr5_-_139813237_139813250	1.12799	UAUUGCU	ENSMUST00000110832.1|Tmem184a|ENSMUSG00000036687.7|transmembrane protein 184a
mm10_v2_chr11_-_75422586_75422701	1.10505	UAUUGCU	ENSMUST00000138661.1|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1 	ENSMUST00000000769.7|Serpinf1|ENSMUSG00000000753.9|serine (or cysteine) peptidase inhibitor, clade F, member 1
mm10_v2_chr15_+_87625214_87625230	1.09603	UAUUGCU	ENSMUST00000068088.6|Fam19a5|ENSMUSG00000054863.8|family with sequence similarity 19, member A5
mm10_v2_chr8_+_76899772_76899828	1.09118	UAUUGCU	ENSMUST00000109913.2|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2
mm10_v2_chr18_+_56432116_56432163	1.09083	UAUUGCU	ENSMUST00000070166.5|Gramd3|ENSMUSG00000001700.9|GRAM domain containing 3
mm10_v2_chr9_-_22002599_22002640	1.08219	UAUUGCU	ENSMUST00000115336.2|Ccdc151|ENSMUSG00000039632.6|coiled-coil domain containing 151 	ENSMUST00000044926.5|Ccdc151|ENSMUSG00000039632.6|coiled-coil domain containing 151
mm10_v2_chr1_+_187997821_187997834	1.08189	UAUUGCU	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr19_-_46148369_46148386	1.05438	UAUUGCU	ENSMUST00000026259.9|Pitx3|ENSMUSG00000025229.9|paired-like homeodomain transcription factor 3
mm10_v2_chr13_-_41220395_41220412	1.04569	UAUUGCU	ENSMUST00000021793.7|Elovl2|ENSMUSG00000021364.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
mm10_v2_chr1_+_131962941_131962969	1.03385	UAUUGCU	ENSMUST00000177943.1|Slc45a3|ENSMUSG00000026435.9|solute carrier family 45, member 3
mm10_v2_chr17_-_91092715_91092822	1.03099	UAUUGCU	ENSMUST00000160800.2|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000159778.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000160844.3|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr2_+_55437100_55437182	1.0168	UAUUGCU	ENSMUST00000112633.2|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3 	ENSMUST00000112632.1|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3
mm10_v2_chr17_+_64600702_64600739	1.0093	UAUUGCU	ENSMUST00000086723.3|Man2a1|ENSMUSG00000024085.7|mannosidase 2, alpha 1
mm10_v2_chr2_-_122702615_122702717	0.996413	UAUUGCU	ENSMUST00000005952.4|Slc30a4|ENSMUSG00000005802.6|solute carrier family 30 (zinc transporter), member 4 	ENSMUST00000099457.3|Slc30a4|ENSMUSG00000005802.6|solute carrier family 30 (zinc transporter), member 4
mm10_v2_chr6_+_29768443_29768542	0.990327	UAUUGCU	ENSMUST00000166718.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000102995.2|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000115242.2|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr13_+_9276477_9276620	0.986398	UAUUGCU	ENSMUST00000174552.1|Dip2c|ENSMUSG00000048264.9|DIP2 disco-interacting protein 2 homolog C (Drosophila)
mm10_v2_chr19_+_28990476_28990497	0.984847	UAUUGCU	ENSMUST00000050148.3|Cdc37l1|ENSMUSG00000024780.6|cell division cycle 37-like 1
mm10_v2_chrX_+_142226765_142226806	0.972843	UAUUGCU	ENSMUST00000112916.2|Nxt2|ENSMUSG00000042271.7|nuclear transport factor 2-like export factor 2
mm10_v2_chr7_-_43489967_43490075	0.956127	UAUUGCU	ENSMUST00000107974.1|Iglon5|ENSMUSG00000013367.4|IgLON family member 5
mm10_v2_chr5_-_147894804_147894830	0.948865	UAUUGCU	ENSMUST00000118527.1|Slc46a3|ENSMUSG00000029650.4|solute carrier family 46, member 3 	ENSMUST00000031655.3|Slc46a3|ENSMUSG00000029650.4|solute carrier family 46, member 3 	ENSMUST00000138244.1|Slc46a3|ENSMUSG00000029650.4|solute carrier family 46, member 3
mm10_v2_chr6_+_88724412_88724461	0.944225	UAUUGCU	ENSMUST00000113585.2|Mgll|ENSMUSG00000033174.11|monoglyceride lipase
mm10_v2_chrX_-_152769461_152769649	0.925956	UAUUGCU	ENSMUST00000101141.2|Shroom2|ENSMUSG00000045180.7|shroom family member 2 	ENSMUST00000062317.4|Shroom2|ENSMUSG00000045180.7|shroom family member 2
mm10_v2_chr18_+_9212856_9212856	0.909882	UAUUGCU	ENSMUST00000041080.5|Fzd8|ENSMUSG00000036904.5|frizzled homolog 8 (Drosophila)
mm10_v2_chr11_-_60220550_60220632	0.908867	UAUUGCU	ENSMUST00000020846.1|Srebf1|ENSMUSG00000020538.9|sterol regulatory element binding transcription factor 1
mm10_v2_chr2_-_77519565_77519647	0.901624	UAUUGCU	ENSMUST00000111830.2|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr1_-_51478390_51478406	0.883796	UAUUGCU	ENSMUST00000027279.5|Nabp1|ENSMUSG00000026107.5|nucleic acid binding protein 1
mm10_v2_chr18_+_64340225_64340364	0.883679	UAUUGCU	ENSMUST00000175965.2|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2 	ENSMUST00000115145.3|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2
mm10_v2_chr6_-_71440623_71440645	0.86652	UAUUGCU	ENSMUST00000002292.8|Rmnd5a|ENSMUSG00000002222.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm10_v2_chr3_+_41555723_41555745	0.854778	UAUUGCU	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr4_+_95967205_95967320	0.849278	UAUUGCU	ENSMUST00000030306.7|Hook1|ENSMUSG00000028572.7|hook homolog 1 (Drosophila)
mm10_v2_chr11_+_72607221_72607307	0.835986	UAUUGCU	ENSMUST00000021148.6|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1 	ENSMUST00000138247.1|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1
mm10_v2_chr5_-_34187670_34187749	0.829795	UAUUGCU	ENSMUST00000042701.6|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4 	ENSMUST00000119171.1|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4
mm10_v2_chr17_+_53566971_53567023	0.826069	UAUUGCU	ENSMUST00000000724.8|Kat2b|ENSMUSG00000000708.8|K(lysine) acetyltransferase 2B
mm10_v2_chr2_-_125859139_125859221	0.813954	UAUUGCU	ENSMUST00000110463.1|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana) 	ENSMUST00000028635.5|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)
mm10_v2_chr3_-_121263159_121263252	0.810832	UAUUGCU	ENSMUST00000128909.1|Tmem56|ENSMUSG00000028132.9|transmembrane protein 56
mm10_v2_chrX_-_51018011_51018032	0.809737	UAUUGCU	ENSMUST00000053593.7|Rap2c|ENSMUSG00000050029.7|RAP2C, member of RAS oncogene family
mm10_v2_chr6_+_97807014_97807067	0.807343	UAUUGCU	ENSMUST00000043637.7|Mitf|ENSMUSG00000035158.9|microphthalmia-associated transcription factor
mm10_v2_chr2_-_180273488_180273502	0.800793	UAUUGCU	ENSMUST00000108891.1|Cables2|ENSMUSG00000038990.8|CDK5 and Abl enzyme substrate 2
mm10_v2_chr13_-_103920508_103920572	0.793578	UAUUGCU	ENSMUST00000053927.5|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein 	ENSMUST00000091269.4|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein 	ENSMUST00000022222.5|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein
mm10_v2_chr5_-_51553896_51553921	0.782558	UAUUGCU	ENSMUST00000132734.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm10_v2_chr6_-_59426279_59426345	0.772649	UAUUGCU	ENSMUST00000051065.4|Gprin3|ENSMUSG00000045441.4|GPRIN family member 3
mm10_v2_chr17_+_69969073_69969086	0.762963	UAUUGCU	ENSMUST00000133983.1|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr5_-_113163288_113163351	0.755647	UAUUGCU	ENSMUST00000050125.8|2900026A02Rik|ENSMUSG00000051339.8|RIKEN cDNA 2900026A02 gene
mm10_v2_chr18_-_77565050_77565162	0.741034	UAUUGCU	ENSMUST00000182153.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182146.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000026494.7|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182024.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165
mm10_v2_chr15_+_41789495_41789527	0.739879	UAUUGCU	ENSMUST00000090095.5|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1 	ENSMUST00000022918.7|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr8_+_90828820_90828842	0.735223	UAUUGCU	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr2_+_134786154_134786170	0.732185	UAUUGCU	ENSMUST00000110116.1|Plcb1|ENSMUSG00000051177.10|phospholipase C, beta 1
mm10_v2_chr15_-_97055942_97055964	0.727926	UAUUGCU	ENSMUST00000023101.3|Slc38a4|ENSMUSG00000022464.7|solute carrier family 38, member 4
mm10_v2_chr6_+_47454320_47454423	0.7267	UAUUGCU	ENSMUST00000031697.8|Cul1|ENSMUSG00000029686.9|cullin 1
mm10_v2_chr14_-_31830402_31830440	0.71877	UAUUGCU	ENSMUST00000014640.7|Ankrd28|ENSMUSG00000014496.7|ankyrin repeat domain 28
mm10_v2_chr4_+_97777606_97777632	0.717343	UAUUGCU	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr15_-_81400043_81400093	0.715672	UAUUGCU	ENSMUST00000172107.1|St13|ENSMUSG00000022403.8|suppression of tumorigenicity 13 	ENSMUST00000169204.1|St13|ENSMUSG00000022403.8|suppression of tumorigenicity 13 	ENSMUST00000163382.1|St13|ENSMUSG00000022403.8|suppression of tumorigenicity 13
mm10_v2_chr1_-_190170671_190170744	0.715106	UAUUGCU	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr2_+_49451486_49451559	0.713761	UAUUGCU	ENSMUST00000092123.4|Epc2|ENSMUSG00000069495.6|enhancer of polycomb homolog 2 (Drosophila)
mm10_v2_chr19_-_6921804_6921834	0.708125	UAUUGCU	ENSMUST00000025906.4|Esrra|ENSMUSG00000024955.7|estrogen related receptor, alpha
mm10_v2_chr2_+_79635352_79635410	0.703236	UAUUGCU	ENSMUST00000111785.2|Ssfa2|ENSMUSG00000027007.10|sperm specific antigen 2
mm10_v2_chr3_-_89387132_89387189	0.701398	UAUUGCU	ENSMUST00000107433.1|Zbtb7b|ENSMUSG00000028042.9|zinc finger and BTB domain containing 7B
mm10_v2_chr17_+_43801823_43801863	0.69679	UAUUGCU	ENSMUST00000044895.5|Rcan2|ENSMUSG00000039601.9|regulator of calcineurin 2
mm10_v2_chr11_+_51763682_51763749	0.695806	UAUUGCU	ENSMUST00000020653.5|Sar1b|ENSMUSG00000020386.5|SAR1 gene homolog B (S. cerevisiae)
mm10_v2_chr6_-_128438673_128438698	0.694805	UAUUGCU	ENSMUST00000032508.4|Fkbp4|ENSMUSG00000030357.4|FK506 binding protein 4
mm10_v2_chr15_+_44619551_44619641	0.69399	UAUUGCU	ENSMUST00000022964.7|Ebag9|ENSMUSG00000022339.8|estrogen receptor-binding fragment-associated gene 9
mm10_v2_chr6_-_126645784_126645801	0.687453	UAUUGCU	ENSMUST00000055168.3|Kcna1|ENSMUSG00000047976.3|potassium voltage-gated channel, shaker-related subfamily, member 1
mm10_v2_chr4_-_70534904_70534987	0.683924	UAUUGCU	ENSMUST00000107359.2|Megf9|ENSMUSG00000039270.3|multiple EGF-like-domains 9
mm10_v2_chr18_+_53862087_53862143	0.678087	UAUUGCU	ENSMUST00000069597.6|Csnk1g3|ENSMUSG00000073563.2|casein kinase 1, gamma 3
mm10_v2_chr16_+_42907563_42907684	0.670183	UAUUGCU	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr18_-_60713389_60713389	0.662844	UAUUGCU	ENSMUST00000169273.1|Ndst1|ENSMUSG00000054008.8|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm10_v2_chr1_-_65179058_65179181	0.662824	UAUUGCU	ENSMUST00000097709.4|Idh1|ENSMUSG00000025950.10|isocitrate dehydrogenase 1 (NADP+), soluble
mm10_v2_chr13_+_38151324_38151339	0.662405	UAUUGCU	ENSMUST00000127906.1|Dsp|ENSMUSG00000054889.3|desmoplakin
mm10_v2_chr13_-_43480973_43481005	0.660883	UAUUGCU	ENSMUST00000144326.2|Ranbp9|ENSMUSG00000038546.8|RAN binding protein 9
mm10_v2_chr8_-_83332416_83332494	0.657647	UAUUGCU	ENSMUST00000177594.1|Elmod2|ENSMUSG00000035151.6|ELMO/CED-12 domain containing 2 	ENSMUST00000053902.3|Elmod2|ENSMUSG00000035151.6|ELMO/CED-12 domain containing 2
mm10_v2_chrX_+_103356464_103356488	0.6513	UAUUGCU	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chrX_+_68821093_68821093	0.650863	UAUUGCU	ENSMUST00000096420.2|Gm14698|ENSMUSG00000071748.2|predicted gene 14698
mm10_v2_chr1_-_9748376_9748451	0.650459	UAUUGCU	ENSMUST00000057438.6|Vcpip1|ENSMUSG00000045210.8|valosin containing protein (p97)/p47 complex interacting protein 1
mm10_v2_chr17_+_55445550_55445701	0.643099	UAUUGCU	ENSMUST00000025000.3|St6gal2|ENSMUSG00000024172.4|beta galactoside alpha 2,6 sialyltransferase 2
mm10_v2_chr4_-_34687382_34687452	0.63983	UAUUGCU	ENSMUST00000029970.7|Slc35a1|ENSMUSG00000028293.8|solute carrier family 35 (CMP-sialic acid transporter), member 1
mm10_v2_chr13_+_25056206_25056253	0.638547	UAUUGCU	ENSMUST00000069614.6|Dcdc2a|ENSMUSG00000035910.9|doublecortin domain containing 2a
mm10_v2_chr6_+_50110186_50110383	0.638431	UAUUGCU	ENSMUST00000166318.1|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 	ENSMUST00000036236.8|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 	ENSMUST00000036225.8|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
mm10_v2_chr18_+_57878620_57878678	0.636839	UAUUGCU	ENSMUST00000115366.2|Slc12a2|ENSMUSG00000024597.10|solute carrier family 12, member 2
mm10_v2_chr2_-_132578155_132578233	0.635623	UAUUGCU	ENSMUST00000110136.1|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 	ENSMUST00000124107.1|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 	ENSMUST00000060955.5|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
mm10_v2_chr19_+_38836561_38836612	0.634691	UAUUGCU	ENSMUST00000037302.5|Tbc1d12|ENSMUSG00000048720.7|TBC1D12: TBC1 domain family, member 12
mm10_v2_chr14_-_30353468_30353535	0.631855	UAUUGCU	ENSMUST00000112249.1|Cacna1d|ENSMUSG00000015968.10|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm10_v2_chr2_-_26092149_26092177	0.620113	UAUUGCU	ENSMUST00000114159.2|Nacc2|ENSMUSG00000026932.8|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm10_v2_chr11_-_3722189_3722222	0.619016	UAUUGCU	ENSMUST00000102950.3|Osbp2|ENSMUSG00000020435.11|oxysterol binding protein 2 	ENSMUST00000101632.3|Osbp2|ENSMUSG00000020435.11|oxysterol binding protein 2
mm10_v2_chr12_-_108275409_108275417	0.618729	UAUUGCU	ENSMUST00000136175.1|Ccdc85c|ENSMUSG00000084883.1|coiled-coil domain containing 85C
mm10_v2_chr11_-_35980473_35980579	0.616573	UAUUGCU	ENSMUST00000018993.6|Wwc1|ENSMUSG00000018849.6|WW, C2 and coiled-coil domain containing 1
mm10_v2_chr8_-_71486037_71486067	0.61567	UAUUGCU	ENSMUST00000093450.4|Ano8|ENSMUSG00000034863.7|anoctamin 8
mm10_v2_chr6_+_48593883_48593900	0.614378	UAUUGCU	ENSMUST00000154010.1|Repin1|ENSMUSG00000052751.10|replication initiator 1 	ENSMUST00000163452.1|Repin1|ENSMUSG00000052751.10|replication initiator 1 	ENSMUST00000118229.1|Repin1|ENSMUSG00000052751.10|replication initiator 1 	ENSMUST00000009420.8|Repin1|ENSMUSG00000052751.10|replication initiator 1
mm10_v2_chr3_-_107696462_107696574	0.605179	UAUUGCU	ENSMUST00000029490.8|Ahcyl1|ENSMUSG00000027893.8|S-adenosylhomocysteine hydrolase-like 1
mm10_v2_chr12_-_101083653_101083717	0.603987	UAUUGCU	ENSMUST00000048305.8|Smek1|ENSMUSG00000041846.8|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENSMUST00000163095.1|Smek1|ENSMUSG00000041846.8|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
mm10_v2_chr9_-_94538075_94538089	0.601489	UAUUGCU	ENSMUST00000113028.1|1190002N15Rik|ENSMUSG00000045414.7|RIKEN cDNA 1190002N15 gene
mm10_v2_chr18_+_21001292_21001341	0.601081	UAUUGCU	ENSMUST00000072847.5|Rnf138|ENSMUSG00000024317.8|ring finger protein 138 	ENSMUST00000052396.5|Rnf138|ENSMUSG00000024317.8|ring finger protein 138
mm10_v2_chr10_-_61147659_61147703	0.600841	UAUUGCU	ENSMUST00000092498.5|Sgpl1|ENSMUSG00000020097.8|sphingosine phosphate lyase 1 	ENSMUST00000137833.1|Sgpl1|ENSMUSG00000020097.8|sphingosine phosphate lyase 1 	ENSMUST00000155919.1|Sgpl1|ENSMUSG00000020097.8|sphingosine phosphate lyase 1
mm10_v2_chr11_-_86807624_86807746	0.597839	UAUUGCU	ENSMUST00000018569.7|Dhx40|ENSMUSG00000018425.12|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm10_v2_chr9_-_100546053_100546092	0.589889	UAUUGCU	ENSMUST00000116522.1|Nck1|ENSMUSG00000032475.9|non-catalytic region of tyrosine kinase adaptor protein 1
mm10_v2_chr8_-_84800024_84800283	0.589641	UAUUGCU	ENSMUST00000126806.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X 	ENSMUST00000076715.6|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr13_+_104109737_104109746	0.587641	UAUUGCU	ENSMUST00000044385.7|Sgtb|ENSMUSG00000042743.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
mm10_v2_chr3_+_103279293_103279293	0.587581	UAUUGCU	ENSMUST00000029444.6|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33 	ENSMUST00000106860.1|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33
mm10_v2_chr11_-_90390895_90390926	0.581288	UAUUGCU	ENSMUST00000004051.7|Hlf|ENSMUSG00000003949.10|hepatic leukemia factor
mm10_v2_chr2_-_172940299_172940349	0.577837	UAUUGCU	ENSMUST00000009143.7|Bmp7|ENSMUSG00000008999.7|bone morphogenetic protein 7
mm10_v2_chr16_-_64786321_64786321	0.576121	UAUUGCU	ENSMUST00000052588.4|Zfp654|ENSMUSG00000047141.4|zinc finger protein 654
mm10_v2_chr7_-_127824469_127824580	0.554619	UAUUGCU	ENSMUST00000106267.3|Stx1b|ENSMUSG00000030806.5|syntaxin 1B
mm10_v2_chr13_+_119428888_119428960	0.548382	UAUUGCU	ENSMUST00000026520.7|Paip1|ENSMUSG00000025451.9|polyadenylate binding protein-interacting protein 1
mm10_v2_chr7_+_131966446_131966469	0.545447	UAUUGCU	ENSMUST00000045840.4|Gpr26|ENSMUSG00000040125.4|G protein-coupled receptor 26
mm10_v2_chr15_+_102966794_102966812	0.541578	UAUUGCU	ENSMUST00000001699.7|Hoxc10|ENSMUSG00000022484.7|homeobox C10
mm10_v2_chr5_-_96161990_96162097	0.538697	UAUUGCU	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr15_-_31367527_31367759	0.533465	UAUUGCU	ENSMUST00000076942.4|Ankrd33b|ENSMUSG00000022237.10|ankyrin repeat domain 33B 	ENSMUST00000123325.1|Ankrd33b|ENSMUSG00000022237.10|ankyrin repeat domain 33B 	ENSMUST00000110410.2|Ankrd33b|ENSMUSG00000022237.10|ankyrin repeat domain 33B
mm10_v2_chr7_+_100706702_100706731	0.532158	UAUUGCU	ENSMUST00000049053.7|Fam168a|ENSMUSG00000029461.9|family with sequence similarity 168, member A
mm10_v2_chr4_-_118134869_118134962	0.529384	UAUUGCU	ENSMUST00000097912.1|St3gal3|ENSMUSG00000028538.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENSMUST00000030263.2|St3gal3|ENSMUSG00000028538.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENSMUST00000106410.1|St3gal3|ENSMUSG00000028538.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 3
mm10_v2_chr12_+_111574491_111574542	0.528993	UAUUGCU	ENSMUST00000084953.5|Mark3|ENSMUSG00000007411.9|MAP/microtubule affinity-regulating kinase 3 	ENSMUST00000075281.6|Mark3|ENSMUSG00000007411.9|MAP/microtubule affinity-regulating kinase 3
mm10_v2_chr4_+_57637816_57637846	0.528446	UAUUGCU	ENSMUST00000150412.1|Gm20459|ENSMUSG00000089945.4|predicted gene 20459
mm10_v2_chr15_-_84447037_84447097	0.528	UAUUGCU	ENSMUST00000080751.2|1810041L15Rik|ENSMUSG00000062760.4|RIKEN cDNA 1810041L15 gene
mm10_v2_chr1_-_164458345_164458363	0.526522	UAUUGCU	ENSMUST00000027863.7|Atp1b1|ENSMUSG00000026576.7|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm10_v2_chr16_-_62786742_62786797	0.525617	UAUUGCU	ENSMUST00000152553.1|Nsun3|ENSMUSG00000050312.5|NOL1/NOP2/Sun domain family member 3 	ENSMUST00000063089.5|Nsun3|ENSMUSG00000050312.5|NOL1/NOP2/Sun domain family member 3
mm10_v2_chr14_-_39472825_39473088	0.524405	UAUUGCU	ENSMUST00000168810.2|Nrg3|ENSMUSG00000041014.11|neuregulin 3 	ENSMUST00000173780.1|Nrg3|ENSMUSG00000041014.11|neuregulin 3 	ENSMUST00000166968.2|Nrg3|ENSMUSG00000041014.11|neuregulin 3
mm10_v2_chr15_+_102406143_102406380	0.522385	UAUUGCU	ENSMUST00000170884.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000165924.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000163709.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000001326.6|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr18_+_24205303_24205348	0.517979	UAUUGCU	ENSMUST00000000430.7|Galnt1|ENSMUSG00000000420.9|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1
mm10_v2_chr11_+_69326252_69326275	0.516486	UAUUGCU	ENSMUST00000018614.2|Kcnab3|ENSMUSG00000018470.2|potassium voltage-gated channel, shaker-related subfamily, beta member 3
mm10_v2_chr5_-_20882072_20882124	0.515346	UAUUGCU	ENSMUST00000118174.1|Phtf2|ENSMUSG00000039987.9|putative homeodomain transcription factor 2
mm10_v2_chrX_-_113185485_113185522	0.510052	UAUUGCU	ENSMUST00000026607.8|Chm|ENSMUSG00000025531.8|choroidermia 	ENSMUST00000113388.2|Chm|ENSMUSG00000025531.8|choroidermia
mm10_v2_chr15_+_99579054_99579059	0.506871	UAUUGCU	ENSMUST00000023752.4|Aqp2|ENSMUSG00000023013.4|aquaporin 2
mm10_v2_chr4_-_141139727_141139772	0.504676	UAUUGCU	ENSMUST00000148204.1|Szrd1|ENSMUSG00000040842.11|SUZ RNA binding domain containing 1 	ENSMUST00000102487.3|Szrd1|ENSMUSG00000040842.11|SUZ RNA binding domain containing 1
mm10_v2_chr6_+_140424086_140424138	0.4991	UAUUGCU	ENSMUST00000087622.3|Plekha5|ENSMUSG00000030231.8|pleckstrin homology domain containing, family A member 5
mm10_v2_chr4_+_129136948_129136999	0.496029	UAUUGCU	ENSMUST00000102600.3|Fndc5|ENSMUSG00000001334.9|fibronectin type III domain containing 5
mm10_v2_chr5_+_105876532_105876585	0.495276	UAUUGCU	ENSMUST00000150440.1|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326 	ENSMUST00000031227.4|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326
mm10_v2_chr9_-_22052021_22052026	0.494303	UAUUGCU	ENSMUST00000003501.7|Elavl3|ENSMUSG00000003410.7|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
mm10_v2_chr11_+_79339792_79339913	0.493339	UAUUGCU	ENSMUST00000108251.2|Nf1|ENSMUSG00000020716.9|neurofibromatosis 1 	ENSMUST00000071325.2|Nf1|ENSMUSG00000020716.9|neurofibromatosis 1
mm10_v2_chr2_-_125782834_125782870	0.491213	UAUUGCU	ENSMUST00000053699.6|Secisbp2l|ENSMUSG00000035093.10|SECIS binding protein 2-like
mm10_v2_chr8_-_23257009_23257031	0.489718	UAUUGCU	ENSMUST00000121783.1|Golga7|ENSMUSG00000015341.10|golgi autoantigen, golgin subfamily a, 7
mm10_v2_chr7_-_80402743_80402762	0.487953	UAUUGCU	ENSMUST00000122232.1|Furin|ENSMUSG00000030530.9|furin (paired basic amino acid cleaving enzyme)
mm10_v2_chr4_+_80910646_80910685	0.483907	UAUUGCU	ENSMUST00000055922.3|Lurap1l|ENSMUSG00000048706.3|leucine rich adaptor protein 1-like
mm10_v2_chrX_-_17572241_17572325	0.482031	UAUUGCU	ENSMUST00000176638.1|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1 	ENSMUST00000026016.6|Fundc1|ENSMUSG00000025040.7|FUN14 domain containing 1
mm10_v2_chr2_-_167349167_167349249	0.481309	UAUUGCU	ENSMUST00000109221.2|B4galt5|ENSMUSG00000017929.7|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
mm10_v2_chr13_-_9764371_9764423	0.479428	UAUUGCU	ENSMUST00000146059.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11 	ENSMUST00000110637.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11
mm10_v2_chr7_+_107370728_107370848	0.477309	UAUUGCU	ENSMUST00000137663.1|Syt9|ENSMUSG00000062542.5|synaptotagmin IX 	ENSMUST00000073459.5|Syt9|ENSMUSG00000062542.5|synaptotagmin IX
mm10_v2_chr2_-_167188787_167188815	0.476937	UAUUGCU	ENSMUST00000059826.8|Kcnb1|ENSMUSG00000050556.8|potassium voltage gated channel, Shab-related subfamily, member 1
mm10_v2_chr9_-_107679592_107679640	0.473904	UAUUGCU	ENSMUST00000010205.7|Gnat1|ENSMUSG00000034837.7|guanine nucleotide binding protein, alpha transducing 1
mm10_v2_chr11_-_98329641_98329654	0.473846	UAUUGCU	ENSMUST00000041685.6|Neurod2|ENSMUSG00000038255.6|neurogenic differentiation 2
mm10_v2_chrX_+_36328353_36328418	0.472346	UAUUGCU	ENSMUST00000016383.3|Lonrf3|ENSMUSG00000016239.5|LON peptidase N-terminal domain and ring finger 3
mm10_v2_chr7_-_119895697_119895752	0.465382	UAUUGCU	ENSMUST00000059851.6|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr4_+_126103940_126104020	0.463071	UAUUGCU	ENSMUST00000116286.2|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40 	ENSMUST00000094761.4|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40 	ENSMUST00000139524.1|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40
mm10_v2_chr14_+_70530819_70530847	0.458698	UAUUGCU	ENSMUST00000047331.6|Lgi3|ENSMUSG00000033595.6|leucine-rich repeat LGI family, member 3
mm10_v2_chr6_-_30304513_30304570	0.453322	UAUUGCU	ENSMUST00000094543.2|Ube2h|ENSMUSG00000039159.10|ubiquitin-conjugating enzyme E2H 	ENSMUST00000102993.3|Ube2h|ENSMUSG00000039159.10|ubiquitin-conjugating enzyme E2H
mm10_v2_chr7_-_65371210_65371287	0.452795	UAUUGCU	ENSMUST00000102592.3|Tjp1|ENSMUSG00000030516.8|tight junction protein 1
mm10_v2_chr4_+_116221633_116221661	0.451125	UAUUGCU	ENSMUST00000030464.7|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr1_+_105990384_105990498	0.448114	UAUUGCU	ENSMUST00000119166.1|Zcchc2|ENSMUSG00000038866.9|zinc finger, CCHC domain containing 2
mm10_v2_chr19_-_55099417_55099492	0.445326	UAUUGCU	ENSMUST00000061856.5|Gpam|ENSMUSG00000024978.10|glycerol-3-phosphate acyltransferase, mitochondrial
mm10_v2_chr9_-_108263887_108263965	0.442866	UAUUGCU	ENSMUST00000166905.1|Dag1|ENSMUSG00000039952.9|dystroglycan 1 	ENSMUST00000080435.2|Dag1|ENSMUSG00000039952.9|dystroglycan 1
mm10_v2_chr17_+_35126316_35126423	0.441607	UAUUGCU	ENSMUST00000061859.6|D17H6S53E|ENSMUSG00000043311.7|DNA segment, Chr 17, human D6S53E
mm10_v2_chrX_+_140664908_140665072	0.438974	UAUUGCU	ENSMUST00000112990.1|Mid2|ENSMUSG00000000266.5|midline 2 	ENSMUST00000112988.1|Mid2|ENSMUSG00000000266.5|midline 2
mm10_v2_chr9_-_85749308_85749356	0.436975	UAUUGCU	ENSMUST00000039213.8|Ibtk|ENSMUSG00000035941.9|inhibitor of Bruton agammaglobulinemia tyrosine kinase
mm10_v2_chr11_+_87592145_87592229	0.436205	UAUUGCU	ENSMUST00000103179.3|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4 	ENSMUST00000092802.5|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4 	ENSMUST00000146871.1|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4
mm10_v2_chr18_-_14682756_14682914	0.436046	UAUUGCU	ENSMUST00000040964.6|Ss18|ENSMUSG00000037013.9|synovial sarcoma translocation, Chromosome 18 	ENSMUST00000092041.3|Ss18|ENSMUSG00000037013.9|synovial sarcoma translocation, Chromosome 18 	ENSMUST00000040924.7|Ss18|ENSMUSG00000037013.9|synovial sarcoma translocation, Chromosome 18
mm10_v2_chr18_+_61555258_61555290	0.431863	UAUUGCU	ENSMUST00000165123.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr18_-_12236301_12236405	0.430767	UAUUGCU	ENSMUST00000025279.5|Npc1|ENSMUSG00000024413.7|Niemann Pick type C1
mm10_v2_chr7_+_121034445_121034580	0.430665	UAUUGCU	ENSMUST00000033163.6|Mettl9|ENSMUSG00000030876.6|methyltransferase like 9
mm10_v2_chr4_-_126533472_126533613	0.429694	UAUUGCU	ENSMUST00000084289.4|Ago4|ENSMUSG00000042500.11|argonaute RISC catalytic subunit 4
mm10_v2_chr1_+_194619815_194619833	0.429038	UAUUGCU	ENSMUST00000027952.5|Plxna2|ENSMUSG00000026640.6|plexin A2
mm10_v2_chr11_+_54438188_54438220	0.422162	UAUUGCU	ENSMUST00000046835.7|Fnip1|ENSMUSG00000035992.9|folliculin interacting protein 1
mm10_v2_chr19_+_32619997_32620031	0.421997	UAUUGCU	ENSMUST00000025833.6|Papss2|ENSMUSG00000024899.6|3'-phosphoadenosine 5'-phosphosulfate synthase 2
mm10_v2_chr13_-_92530813_92530868	0.421527	UAUUGCU	ENSMUST00000022217.8|Zfyve16|ENSMUSG00000021706.8|zinc finger, FYVE domain containing 16
mm10_v2_chr17_-_26508463_26508519	0.421371	UAUUGCU	ENSMUST00000025025.6|Dusp1|ENSMUSG00000024190.6|dual specificity phosphatase 1
mm10_v2_chr17_-_24644933_24644976	0.419778	UAUUGCU	ENSMUST00000019684.5|Slc9a3r2|ENSMUSG00000002504.8|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm10_v2_chr7_-_47132698_47132717	0.416407	UAUUGCU	ENSMUST00000033142.5|Ptpn5|ENSMUSG00000030854.9|protein tyrosine phosphatase, non-receptor type 5
mm10_v2_chr16_-_78576649_78576666	0.416267	UAUUGCU	ENSMUST00000114220.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed 	ENSMUST00000114219.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed 	ENSMUST00000114218.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed
mm10_v2_chr10_-_86498836_86498858	0.415273	UAUUGCU	ENSMUST00000120638.1|Syn3|ENSMUSG00000059602.8|synapsin III
mm10_v2_chr4_+_9844349_9844372	0.414692	UAUUGCU	ENSMUST00000057613.2|Gdf6|ENSMUSG00000051279.2|growth differentiation factor 6
mm10_v2_chr14_+_120275669_120275714	0.412464	UAUUGCU	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chr7_-_45717919_45718002	0.411601	UAUUGCU	ENSMUST00000107737.2|Sphk2|ENSMUSG00000057342.7|sphingosine kinase 2
mm10_v2_chr9_+_18292267_18292334	0.409013	UAUUGCU	ENSMUST00000001825.7|Chordc1|ENSMUSG00000001774.7|cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1
mm10_v2_chr9_+_31030621_31030700	0.408708	UAUUGCU	ENSMUST00000115222.2|Zbtb44|ENSMUSG00000047412.9|zinc finger and BTB domain containing 44
mm10_v2_chr13_+_77708683_77708740	0.408316	UAUUGCU	ENSMUST00000163257.1|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A 	ENSMUST00000091459.4|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A 	ENSMUST00000099358.3|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A
mm10_v2_chr6_-_85333412_85333441	0.405096	UAUUGCU	ENSMUST00000059034.6|Sfxn5|ENSMUSG00000033720.6|sideroflexin 5 	ENSMUST00000045846.5|Sfxn5|ENSMUSG00000033720.6|sideroflexin 5 	ENSMUST00000113788.1|Sfxn5|ENSMUSG00000033720.6|sideroflexin 5
mm10_v2_chr1_+_184034381_184034437	0.404257	UAUUGCU	ENSMUST00000048655.7|Dusp10|ENSMUSG00000039384.8|dual specificity phosphatase 10
mm10_v2_chr8_+_106150359_106150417	0.402273	UAUUGCU	ENSMUST00000034377.6|Pla2g15|ENSMUSG00000031903.6|phospholipase A2, group XV
mm10_v2_chr14_+_56887795_56887795	0.402271	UAUUGCU	ENSMUST00000022511.8|Zmym2|ENSMUSG00000021945.8|zinc finger, MYM-type 2
mm10_v2_chr12_-_54862783_54862921	0.40184	UAUUGCU	ENSMUST00000078124.7|Cfl2|ENSMUSG00000062929.7|cofilin 2, muscle
mm10_v2_chr10_-_78352323_78352459	0.401577	UAUUGCU	ENSMUST00000001240.5|Agpat3|ENSMUSG00000001211.8|1-acylglycerol-3-phosphate O-acyltransferase 3
mm10_v2_chr19_-_6992478_6992524	0.396234	UAUUGCU	ENSMUST00000025915.5|Dnajc4|ENSMUSG00000024963.5|DnaJ (Hsp40) homolog, subfamily C, member 4
mm10_v2_chr17_+_34670535_34670535	0.395814	UAUUGCU	ENSMUST00000168533.1|Tnxb|ENSMUSG00000033327.10|tenascin XB 	ENSMUST00000087399.4|Tnxb|ENSMUSG00000033327.10|tenascin XB
mm10_v2_chr12_-_98901478_98901492	0.394184	UAUUGCU	ENSMUST00000065716.6|Eml5|ENSMUSG00000051166.9|echinoderm microtubule associated protein like 5
mm10_v2_chr1_-_13372434_13372457	0.39375	UAUUGCU	ENSMUST00000081713.4|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr12_+_110485710_110485755	0.388892	UAUUGCU	ENSMUST00000084985.3|Ppp2r5c|ENSMUSG00000017843.7|protein phosphatase 2, regulatory subunit B (B56), gamma isoform 	ENSMUST00000109832.1|Ppp2r5c|ENSMUSG00000017843.7|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm10_v2_chr2_+_152226839_152226908	0.388179	UAUUGCU	ENSMUST00000099224.3|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000124791.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000133119.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide
mm10_v2_chrX_-_157598656_157598715	0.3852	UAUUGCU	ENSMUST00000149249.1|Mbtps2|ENSMUSG00000046873.12|membrane-bound transcription factor peptidase, site 2 	ENSMUST00000058098.8|Mbtps2|ENSMUSG00000046873.12|membrane-bound transcription factor peptidase, site 2
mm10_v2_chr10_-_89621253_89621275	0.381892	UAUUGCU	ENSMUST00000020102.7|Slc17a8|ENSMUSG00000019935.10|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8
mm10_v2_chr14_+_14703025_14703073	0.381858	UAUUGCU	ENSMUST00000057015.6|Slc4a7|ENSMUSG00000021733.9|solute carrier family 4, sodium bicarbonate cotransporter, member 7
mm10_v2_chr14_+_45351473_45351473	0.38141	UAUUGCU	ENSMUST00000111835.2|Styx|ENSMUSG00000053205.8|serine/threonine/tyrosine interaction protein
mm10_v2_chr8_+_47533639_47533709	0.379466	UAUUGCU	ENSMUST00000033973.7|Rwdd4a|ENSMUSG00000031568.10|RWD domain containing 4A 	ENSMUST00000176379.1|Rwdd4a|ENSMUSG00000031568.10|RWD domain containing 4A
mm10_v2_chr3_+_16183177_16183206	0.378625	UAUUGCU	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr5_+_138754514_138754607	0.377426	UAUUGCU	ENSMUST00000026972.7|Fam20c|ENSMUSG00000025854.9|family with sequence similarity 20, member C
mm10_v2_chr3_-_58525867_58525873	0.368388	UAUUGCU	ENSMUST00000029385.7|Serp1|ENSMUSG00000027808.7|stress-associated endoplasmic reticulum protein 1
mm10_v2_chr8_-_38661508_38661545	0.366609	UAUUGCU	ENSMUST00000118896.1|Sgcz|ENSMUSG00000039539.7|sarcoglycan zeta
mm10_v2_chr9_+_43744399_43744576	0.365689	UAUUGCU	ENSMUST00000034510.7|Pvrl1|ENSMUSG00000032012.7|poliovirus receptor-related 1
mm10_v2_chr1_+_93342854_93342854	0.362686	UAUUGCU	ENSMUST00000027494.4|Ppp1r7|ENSMUSG00000026275.7|protein phosphatase 1, regulatory (inhibitor) subunit 7
mm10_v2_chr6_+_114282635_114282817	0.361885	UAUUGCU	ENSMUST00000032454.5|Slc6a1|ENSMUSG00000030310.8|solute carrier family 6 (neurotransmitter transporter, GABA), member 1
mm10_v2_chr5_-_144014853_144014918	0.361709	UAUUGCU	ENSMUST00000031621.9|Ccz1|ENSMUSG00000029617.9|CCZ1 vacuolar protein trafficking and biogenesis associated
mm10_v2_chr8_+_13105618_13105627	0.360444	UAUUGCU	ENSMUST00000016680.7|Cul4a|ENSMUSG00000031446.8|cullin 4A
mm10_v2_chr9_+_35211155_35211224	0.360365	UAUUGCU	ENSMUST00000034541.5|Srpr|ENSMUSG00000032042.5|signal recognition particle receptor ('docking protein')
mm10_v2_chr2_+_74691090_74691090	0.357516	UAUUGCU	ENSMUST00000061745.3|Hoxd10|ENSMUSG00000050368.3|homeobox D10
mm10_v2_chr4_+_19605451_19605451	0.357163	UAUUGCU	ENSMUST00000108250.2|Gm12353|ENSMUSG00000078772.2|predicted gene 12353
mm10_v2_chr19_+_36554661_36554688	0.354628	UAUUGCU	ENSMUST00000169036.2|Hectd2|ENSMUSG00000041180.7|HECT domain containing 2 	ENSMUST00000047247.5|Hectd2|ENSMUSG00000041180.7|HECT domain containing 2
mm10_v2_chr9_+_3532295_3532354	0.353087	UAUUGCU	ENSMUST00000115733.1|Gucy1a2|ENSMUSG00000041624.9|guanylate cyclase 1, soluble, alpha 2
mm10_v2_chr7_-_67372846_67372858	0.352914	UAUUGCU	ENSMUST00000156690.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000107476.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000076325.5|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000032776.8|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000133074.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A
mm10_v2_chr14_-_33447142_33447179	0.352689	UAUUGCU	ENSMUST00000111944.3|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8 	ENSMUST00000022504.5|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8 	ENSMUST00000111945.2|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8
mm10_v2_chr9_-_96752822_96752869	0.349253	UAUUGCU	ENSMUST00000152594.1|Zbtb38|ENSMUSG00000040433.10|zinc finger and BTB domain containing 38
mm10_v2_chr10_+_80115779_80115824	0.349039	UAUUGCU	ENSMUST00000003152.7|Stk11|ENSMUSG00000003068.9|serine/threonine kinase 11
mm10_v2_chr6_+_117168535_117168584	0.348898	UAUUGCU	ENSMUST00000112866.1|Cxcl12|ENSMUSG00000061353.5|chemokine (C-X-C motif) ligand 12 	ENSMUST00000112871.1|Cxcl12|ENSMUSG00000061353.5|chemokine (C-X-C motif) ligand 12 	ENSMUST00000073043.4|Cxcl12|ENSMUSG00000061353.5|chemokine (C-X-C motif) ligand 12
mm10_v2_chr16_-_10543028_10543096	0.347457	UAUUGCU	ENSMUST00000184863.1|Dexi|ENSMUSG00000038055.6|dexamethasone-induced transcript 	ENSMUST00000038281.5|Dexi|ENSMUSG00000038055.6|dexamethasone-induced transcript
mm10_v2_chr8_+_54077532_54077532	0.345186	UAUUGCU	ENSMUST00000033919.4|Vegfc|ENSMUSG00000031520.5|vascular endothelial growth factor C
mm10_v2_chr2_+_128818104_128818135	0.343673	UAUUGCU	ENSMUST00000110325.1|Tmem87b|ENSMUSG00000014353.8|transmembrane protein 87B
mm10_v2_chr9_+_68653761_68653786	0.340243	UAUUGCU	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
mm10_v2_chr9_-_16378231_16378231	0.339765	UAUUGCU	ENSMUST00000082170.5|Fat3|ENSMUSG00000074505.4|FAT tumor suppressor homolog 3 (Drosophila)
mm10_v2_chr2_-_132815978_132816054	0.337843	UAUUGCU	ENSMUST00000039554.6|Trmt6|ENSMUSG00000037376.8|tRNA methyltransferase 6
mm10_v2_chr2_-_163419508_163419548	0.336409	UAUUGCU	ENSMUST00000046908.3|Oser1|ENSMUSG00000035399.6|oxidative stress responsive serine rich 1
mm10_v2_chr12_-_4907705_4907754	0.335221	UAUUGCU	ENSMUST00000020962.5|Ubxn2a|ENSMUSG00000020634.6|UBX domain protein 2A
mm10_v2_chr10_+_84917616_84917656	0.332408	UAUUGCU	ENSMUST00000038523.7|Ric8b|ENSMUSG00000035620.8|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans) 	ENSMUST00000095385.3|Ric8b|ENSMUSG00000035620.8|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)
mm10_v2_chr13_-_95375329_95375369	0.33099	UAUUGCU	ENSMUST00000022189.8|Aggf1|ENSMUSG00000021681.8|angiogenic factor with G patch and FHA domains 1
mm10_v2_chr2_+_21367532_21367542	0.329005	UAUUGCU	ENSMUST00000055946.7|Gpr158|ENSMUSG00000045967.11|G protein-coupled receptor 158
mm10_v2_chr9_-_72111827_72111895	0.328058	UAUUGCU	ENSMUST00000183404.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184783.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr11_-_106920681_106920735	0.327159	UAUUGCU	ENSMUST00000103067.3|Smurf2|ENSMUSG00000018363.10|SMAD specific E3 ubiquitin protein ligase 2
mm10_v2_chr6_+_122874526_122874573	0.326722	UAUUGCU	ENSMUST00000032477.4|Necap1|ENSMUSG00000030327.6|NECAP endocytosis associated 1
mm10_v2_chr13_+_13954614_13954691	0.325649	UAUUGCU	ENSMUST00000099747.3|B3galnt2|ENSMUSG00000039242.9|UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
mm10_v2_chr13_+_110395041_110395057	0.322886	UAUUGCU	ENSMUST00000022212.7|Plk2|ENSMUSG00000021701.7|polo-like kinase 2
mm10_v2_chr6_+_146724957_146725036	0.32211	UAUUGCU	ENSMUST00000001675.7|Stk38l|ENSMUSG00000001630.7|serine/threonine kinase 38 like 	ENSMUST00000111644.1|Stk38l|ENSMUSG00000001630.7|serine/threonine kinase 38 like
mm10_v2_chr3_-_131344892_131344940	0.318083	UAUUGCU	ENSMUST00000090246.4|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2 	ENSMUST00000126569.1|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2
mm10_v2_chr3_-_19163011_19163085	0.316685	UAUUGCU	ENSMUST00000029125.8|Armc1|ENSMUSG00000027599.8|armadillo repeat containing 1
mm10_v2_chr4_+_45965327_45965342	0.315663	UAUUGCU	ENSMUST00000107777.2|Tdrd7|ENSMUSG00000035517.11|tudor domain containing 7
mm10_v2_chr13_-_93499803_93499825	0.315641	UAUUGCU	ENSMUST00000065537.7|Jmy|ENSMUSG00000021690.9|junction-mediating and regulatory protein
mm10_v2_chr1_-_164307443_164307503	0.313613	UAUUGCU	ENSMUST00000027866.4|Blzf1|ENSMUSG00000026577.7|basic leucine zipper nuclear factor 1 	ENSMUST00000120447.1|Blzf1|ENSMUSG00000026577.7|basic leucine zipper nuclear factor 1 	ENSMUST00000086032.3|Blzf1|ENSMUSG00000026577.7|basic leucine zipper nuclear factor 1
mm10_v2_chr6_+_100833606_100833663	0.313553	UAUUGCU	ENSMUST00000063854.4|Ppp4r2|ENSMUSG00000052144.6|protein phosphatase 4, regulatory subunit 2
mm10_v2_chr2_-_104816696_104816792	0.312141	UAUUGCU	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr17_+_28177339_28177449	0.310647	UAUUGCU	ENSMUST00000073534.2|Zfp523|ENSMUSG00000024220.7|zinc finger protein 523 	ENSMUST00000002318.1|Zfp523|ENSMUSG00000024220.7|zinc finger protein 523
mm10_v2_chr6_+_21215472_21215503	0.309029	UAUUGCU	ENSMUST00000081542.5|Kcnd2|ENSMUSG00000060882.5|potassium voltage-gated channel, Shal-related family, member 2
mm10_v2_chr15_-_103340085_103340100	0.307674	UAUUGCU	ENSMUST00000168828.1|Zfp385a|ENSMUSG00000000552.9|zinc finger protein 385A
mm10_v2_chr2_+_22622183_22622205	0.306549	UAUUGCU	ENSMUST00000028123.3|Gad2|ENSMUSG00000026787.3|glutamic acid decarboxylase 2
mm10_v2_chr3_-_79567679_79567764	0.305546	UAUUGCU	ENSMUST00000076136.4|Fnip2|ENSMUSG00000061175.5|folliculin interacting protein 2
mm10_v2_chr2_-_26503814_26503836	0.304621	UAUUGCU	ENSMUST00000028288.4|Notch1|ENSMUSG00000026923.9|notch 1
mm10_v2_chr4_+_57845240_57845265	0.300726	UAUUGCU	ENSMUST00000102903.1|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2 	ENSMUST00000107598.3|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2
mm10_v2_chr2_-_130638094_130638113	0.300142	UAUUGCU	ENSMUST00000089561.3|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3 	ENSMUST00000110260.1|Lzts3|ENSMUSG00000037703.8|leucine zipper, putative tumor suppressor family member 3
mm10_v2_chr11_-_51857624_51857686	0.299951	UAUUGCU	ENSMUST00000020655.7|Phf15|ENSMUSG00000020387.9|PHD finger protein 15 	ENSMUST00000109090.1|Phf15|ENSMUSG00000020387.9|PHD finger protein 15
mm10_v2_chr13_-_53377355_53377373	0.297792	UAUUGCU	ENSMUST00000021920.6|Sptlc1|ENSMUSG00000021468.7|serine palmitoyltransferase, long chain base subunit 1
mm10_v2_chr4_-_141723401_141723436	0.296991	UAUUGCU	ENSMUST00000102484.4|Ddi2|ENSMUSG00000078515.3|DNA-damage inducible protein 2 	ENSMUST00000177592.1|Rsc1a1|ENSMUSG00000040715.11|regulatory solute carrier protein, family 1, member 1
mm10_v2_chr4_-_9643638_9643717	0.295798	UAUUGCU	ENSMUST00000108333.1|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000108334.1|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000108335.1|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000152526.1|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000103004.3|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase
mm10_v2_chr2_-_48949206_48949276	0.29519	UAUUGCU	ENSMUST00000090976.3|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000149679.1|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000028098.4|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4
mm10_v2_chr1_+_143640664_143640751	0.294897	UAUUGCU	ENSMUST00000038252.2|B3galt2|ENSMUSG00000033849.2|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
mm10_v2_chr2_+_82053222_82053311	0.293844	UAUUGCU	ENSMUST00000047527.7|Zfp804a|ENSMUSG00000070866.4|zinc finger protein 804A
mm10_v2_chr9_+_65032413_65032466	0.292019	UAUUGCU	ENSMUST00000034960.6|Dpp8|ENSMUSG00000032393.8|dipeptidylpeptidase 8
mm10_v2_chr1_-_24587433_24587472	0.291468	UAUUGCU	ENSMUST00000115244.2|Col19a1|ENSMUSG00000026141.7|collagen, type XIX, alpha 1
mm10_v2_chr4_+_115784799_115784837	0.289084	UAUUGCU	ENSMUST00000177280.1|Atpaf1|ENSMUSG00000028710.10|ATP synthase mitochondrial F1 complex assembly factor 1 	ENSMUST00000176047.1|Atpaf1|ENSMUSG00000028710.10|ATP synthase mitochondrial F1 complex assembly factor 1 	ENSMUST00000030478.6|Atpaf1|ENSMUSG00000028710.10|ATP synthase mitochondrial F1 complex assembly factor 1
mm10_v2_chr16_+_24393350_24393428	0.287997	UAUUGCU	ENSMUST00000038053.6|Lpp|ENSMUSG00000033306.8|LIM domain containing preferred translocation partner in lipoma
mm10_v2_chr7_-_17027853_17027921	0.28519	UAUUGCU	ENSMUST00000003183.5|Ppp5c|ENSMUSG00000003099.5|protein phosphatase 5, catalytic subunit
mm10_v2_chr1_+_179960472_179960585	0.283371	UAUUGCU	ENSMUST00000097453.2|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000111117.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr2_-_84715160_84715218	0.282585	UAUUGCU	ENSMUST00000035840.5|Zdhhc5|ENSMUSG00000034075.10|zinc finger, DHHC domain containing 5
mm10_v2_chr5_-_93206489_93206498	0.282384	UAUUGCU	ENSMUST00000058550.8|Ccni|ENSMUSG00000063015.6|cyclin I
mm10_v2_chr16_+_33380765_33380787	0.281399	UAUUGCU	ENSMUST00000165418.1|Zfp148|ENSMUSG00000022811.10|zinc finger protein 148
mm10_v2_chr7_-_118705708_118705786	0.280506	UAUUGCU	ENSMUST00000038791.8|Gde1|ENSMUSG00000033917.8|glycerophosphodiester phosphodiesterase 1
mm10_v2_chr16_+_44139821_44139900	0.280147	UAUUGCU	ENSMUST00000159514.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000161326.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063520.8|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063542.7|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm10_v2_chr16_-_9994921_9995012	0.277113	UAUUGCU	ENSMUST00000115835.1|Grin2a|ENSMUSG00000059003.6|glutamate receptor, ionotropic, NMDA2A (epsilon 1)
mm10_v2_chr15_+_65787023_65787090	0.275579	UAUUGCU	ENSMUST00000015146.9|Efr3a|ENSMUSG00000015002.10|EFR3 homolog A (S. cerevisiae) 	ENSMUST00000173858.1|Efr3a|ENSMUSG00000015002.10|EFR3 homolog A (S. cerevisiae) 	ENSMUST00000172756.1|Efr3a|ENSMUSG00000015002.10|EFR3 homolog A (S. cerevisiae) 	ENSMUST00000174856.1|Efr3a|ENSMUSG00000015002.10|EFR3 homolog A (S. cerevisiae)
mm10_v2_chr16_-_97962581_97962636	0.275518	UAUUGCU	ENSMUST00000113734.2|Zbtb21|ENSMUSG00000046962.9|zinc finger and BTB domain containing 21 	ENSMUST00000052089.7|Zbtb21|ENSMUSG00000046962.9|zinc finger and BTB domain containing 21 	ENSMUST00000063605.7|Zbtb21|ENSMUSG00000046962.9|zinc finger and BTB domain containing 21
mm10_v2_chr4_-_82859571_82859679	0.275425	UAUUGCU	ENSMUST00000156055.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21 	ENSMUST00000030110.8|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr18_+_42275353_42275392	0.273963	UAUUGCU	ENSMUST00000046972.7|Rbm27|ENSMUSG00000024491.9|RNA binding motif protein 27 	ENSMUST00000091920.5|Rbm27|ENSMUSG00000024491.9|RNA binding motif protein 27
mm10_v2_chr5_+_28071356_28071372	0.270887	UAUUGCU	ENSMUST00000059155.10|Insig1|ENSMUSG00000045294.10|insulin induced gene 1
mm10_v2_chr14_-_47568427_47568436	0.266476	UAUUGCU	ENSMUST00000042988.6|Atg14|ENSMUSG00000037526.6|autophagy related 14
mm10_v2_chr4_+_53440516_53440684	0.266016	UAUUGCU	ENSMUST00000107651.2|Slc44a1|ENSMUSG00000028412.11|solute carrier family 44, member 1 	ENSMUST00000107647.1|Slc44a1|ENSMUSG00000028412.11|solute carrier family 44, member 1
mm10_v2_chr13_-_40733768_40733836	0.263546	UAUUGCU	ENSMUST00000110193.2|Tfap2a|ENSMUSG00000021359.9|transcription factor AP-2, alpha
mm10_v2_chr3_-_89160155_89160202	0.262678	UAUUGCU	ENSMUST00000029686.3|Hcn3|ENSMUSG00000028051.4|hyperpolarization-activated, cyclic nucleotide-gated K+ 3
mm10_v2_chr2_+_130906461_130906500	0.26221	UAUUGCU	ENSMUST00000028781.8|Atrn|ENSMUSG00000027312.8|attractin
mm10_v2_chr1_-_16619437_16619489	0.260786	UAUUGCU	ENSMUST00000117146.1|Ube2w|ENSMUSG00000025939.11|ubiquitin-conjugating enzyme E2W (putative)
mm10_v2_chr8_-_3279606_3279622	0.258804	UAUUGCU	ENSMUST00000091291.4|Insr|ENSMUSG00000005534.9|insulin receptor
mm10_v2_chr2_+_156196642_156196775	0.256666	UAUUGCU	ENSMUST00000037401.8|Phf20|ENSMUSG00000038116.10|PHD finger protein 20
mm10_v2_chr4_+_124802543_124802678	0.256204	UAUUGCU	ENSMUST00000138807.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000030723.2|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000175875.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1
mm10_v2_chr1_-_151428440_151428474	0.255729	UAUUGCU	ENSMUST00000064771.5|Swt1|ENSMUSG00000052748.8|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
mm10_v2_chr11_+_78536355_78536368	0.2441	UAUUGCU	ENSMUST00000128788.1|Ift20|ENSMUSG00000001105.9|intraflagellar transport 20
mm10_v2_chr3_+_32436151_32436151	0.241539	UAUUGCU	ENSMUST00000029201.7|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr9_-_52679429_52679429	0.240007	UAUUGCU	ENSMUST00000098768.2|AI593442|ENSMUSG00000078307.2|expressed sequence AI593442
mm10_v2_chr2_-_37647199_37647285	0.238934	UAUUGCU	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr2_+_60209887_60210073	0.236036	UAUUGCU	ENSMUST00000102748.4|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7 	ENSMUST00000102747.1|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7
mm10_v2_chr2_+_52857844_52857868	0.232976	UAUUGCU	ENSMUST00000090952.4|Fmnl2|ENSMUSG00000036053.10|formin-like 2 	ENSMUST00000049483.6|Fmnl2|ENSMUSG00000036053.10|formin-like 2 	ENSMUST00000050719.6|Fmnl2|ENSMUSG00000036053.10|formin-like 2
mm10_v2_chr1_+_51289106_51289142	0.232099	UAUUGCU	ENSMUST00000051572.6|Sdpr|ENSMUSG00000045954.6|serum deprivation response
mm10_v2_chr6_-_134566913_134566995	0.230569	UAUUGCU	ENSMUST00000032322.8|Lrp6|ENSMUSG00000030201.9|low density lipoprotein receptor-related protein 6
mm10_v2_chrX_+_13280970_13281031	0.228146	UAUUGCU	ENSMUST00000000804.6|Ddx3x|ENSMUSG00000000787.6|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm10_v2_chr4_+_42949814_42949923	0.225325	UAUUGCU	ENSMUST00000037872.3|Dnajb5|ENSMUSG00000036052.8|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENSMUST00000098112.2|Dnajb5|ENSMUSG00000036052.8|DnaJ (Hsp40) homolog, subfamily B, member 5
mm10_v2_chr11_-_21370452_21370485	0.225213	UAUUGCU	ENSMUST00000102875.4|Ugp2|ENSMUSG00000001891.10|UDP-glucose pyrophosphorylase 2
mm10_v2_chr13_-_58113592_58113620	0.224962	UAUUGCU	ENSMUST00000160860.1|Klhl3|ENSMUSG00000014164.8|kelch-like 3
mm10_v2_chr13_-_45964964_45965001	0.223635	UAUUGCU	ENSMUST00000180110.1|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000091628.3|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000167708.2|Atxn1|ENSMUSG00000046876.9|ataxin 1
mm10_v2_chr4_+_106316187_106316243	0.221596	UAUUGCU	ENSMUST00000165709.1|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24 	ENSMUST00000106798.1|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24 	ENSMUST00000094933.4|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24
mm10_v2_chr14_-_55900188_55900235	0.221174	UAUUGCU	ENSMUST00000111325.3|Sdr39u1|ENSMUSG00000022223.8|short chain dehydrogenase/reductase family 39U, member 1
mm10_v2_chr1_+_177444653_177444669	0.216569	UAUUGCU	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr10_-_13553139_13553153	0.214513	UAUUGCU	ENSMUST00000019945.8|Pex3|ENSMUSG00000019809.10|peroxisomal biogenesis factor 3 	ENSMUST00000170376.1|Pex3|ENSMUSG00000019809.10|peroxisomal biogenesis factor 3
mm10_v2_chr3_+_22076644_22076681	0.214384	UAUUGCU	ENSMUST00000063988.8|Tbl1xr1|ENSMUSG00000027630.8|transducin (beta)-like 1X-linked receptor 1
mm10_v2_chr8_-_90348343_90348386	0.213156	UAUUGCU	ENSMUST00000109621.3|Tox3|ENSMUSG00000043668.7|TOX high mobility group box family member 3
mm10_v2_chr10_+_21994666_21994694	0.212263	UAUUGCU	ENSMUST00000020145.5|Sgk1|ENSMUSG00000019970.9|serum/glucocorticoid regulated kinase 1
mm10_v2_chr6_+_110645572_110645588	0.211696	UAUUGCU	ENSMUST00000071076.6|Grm7|ENSMUSG00000056755.7|glutamate receptor, metabotropic 7 	ENSMUST00000172951.1|Grm7|ENSMUSG00000056755.7|glutamate receptor, metabotropic 7
mm10_v2_chr9_+_74861888_74861921	0.211494	UAUUGCU	ENSMUST00000056006.9|Onecut1|ENSMUSG00000043013.9|one cut domain, family member 1
mm10_v2_chr7_+_54835959_54835959	0.2101	UAUUGCU	ENSMUST00000082373.6|Luzp2|ENSMUSG00000063297.6|leucine zipper protein 2
mm10_v2_chr11_+_96133786_96133786	0.209986	UAUUGCU	ENSMUST00000167258.1|Ttll6|ENSMUSG00000038756.7|tubulin tyrosine ligase-like family, member 6
mm10_v2_chr1_-_58586191_58586323	0.207595	UAUUGCU	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr7_-_110844350_110844457	0.207504	UAUUGCU	ENSMUST00000177462.1|Rnf141|ENSMUSG00000030788.9|ring finger protein 141 	ENSMUST00000176746.1|Rnf141|ENSMUSG00000030788.9|ring finger protein 141 	ENSMUST00000177236.1|Rnf141|ENSMUSG00000030788.9|ring finger protein 141
mm10_v2_chr11_-_101119814_101119849	0.206927	UAUUGCU	ENSMUST00000107295.3|Fam134c|ENSMUSG00000017802.8|family with sequence similarity 134, member C
mm10_v2_chr2_+_129800451_129800526	0.206826	UAUUGCU	ENSMUST00000165413.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35 	ENSMUST00000166282.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35
mm10_v2_chr9_-_119322421_119322449	0.20668	UAUUGCU	ENSMUST00000040853.4|Oxsr1|ENSMUSG00000036737.6|oxidative-stress responsive 1
mm10_v2_chrX_-_12762069_12762080	0.205941	UAUUGCU	ENSMUST00000096495.4|Med14|ENSMUSG00000064127.7|mediator complex subunit 14 	ENSMUST00000076016.5|Med14|ENSMUSG00000064127.7|mediator complex subunit 14
mm10_v2_chr11_-_30025915_30026033	0.205843	UAUUGCU	ENSMUST00000058902.5|Eml6|ENSMUSG00000044072.8|echinoderm microtubule associated protein like 6
mm10_v2_chr18_-_33463615_33463634	0.205788	UAUUGCU	ENSMUST00000051087.8|Nrep|ENSMUSG00000042834.8|neuronal regeneration related protein
mm10_v2_chr15_-_78718113_78718113	0.204854	UAUUGCU	ENSMUST00000088592.4|Elfn2|ENSMUSG00000043460.6|leucine rich repeat and fibronectin type III, extracellular 2
mm10_v2_chr19_+_46599081_46599150	0.204851	UAUUGCU	ENSMUST00000138302.2|Wbp1l|ENSMUSG00000047731.11|WW domain binding protein 1 like 	ENSMUST00000099376.4|Wbp1l|ENSMUSG00000047731.11|WW domain binding protein 1 like
mm10_v2_chr10_-_130280218_130280242	0.204437	UAUUGCU	ENSMUST00000061571.3|Neurod4|ENSMUSG00000048015.3|neurogenic differentiation 4
mm10_v2_chr12_+_71831064_71831178	0.204134	UAUUGCU	ENSMUST00000085299.2|Daam1|ENSMUSG00000034574.9|dishevelled associated activator of morphogenesis 1
mm10_v2_chr5_+_125532377_125532393	0.203142	UAUUGCU	ENSMUST00000031446.6|Tmem132b|ENSMUSG00000070498.3|transmembrane protein 132B
mm10_v2_chr7_-_116237767_116237781	0.202726	UAUUGCU	ENSMUST00000182834.1|Plekha7|ENSMUSG00000045659.11|pleckstrin homology domain containing, family A member 7
mm10_v2_chr15_+_44196135_44196233	0.202203	UAUUGCU	ENSMUST00000038856.6|Trhr|ENSMUSG00000038760.7|thyrotropin releasing hormone receptor 	ENSMUST00000110289.3|Trhr|ENSMUSG00000038760.7|thyrotropin releasing hormone receptor
mm10_v2_chr6_+_34709442_34709497	0.202169	UAUUGCU	ENSMUST00000115021.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr10_-_120979327_120979373	0.201985	UAUUGCU	ENSMUST00000119944.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3 	ENSMUST00000119093.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3
mm10_v2_chr3_-_36690118_36690172	0.201789	UAUUGCU	ENSMUST00000029271.4|Trpc3|ENSMUSG00000027716.7|transient receptor potential cation channel, subfamily C, member 3
mm10_v2_chr13_-_74317234_74317326	0.201756	UAUUGCU	ENSMUST00000022060.5|Pdcd6|ENSMUSG00000021576.5|programmed cell death 6
mm10_v2_chr17_+_8283762_8283852	0.200823	UAUUGCU	ENSMUST00000155364.1|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1 	ENSMUST00000046754.8|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1 	ENSMUST00000124023.1|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1
mm10_v2_chr9_-_115310421_115310447	0.200423	UAUUGCU	ENSMUST00000035010.8|Stt3b|ENSMUSG00000032437.9|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm10_v2_chr4_+_155601414_155601443	0.198969	UAUUGCU	ENSMUST00000105608.2|Slc35e2|ENSMUSG00000042202.9|solute carrier family 35, member E2
mm10_v2_chr18_+_77065195_77065250	0.198148	UAUUGCU	ENSMUST00000114777.2|Pias2|ENSMUSG00000025423.9|protein inhibitor of activated STAT 2
mm10_v2_chr8_+_9977707_9977725	0.197598	UAUUGCU	ENSMUST00000139793.1|Abhd13|ENSMUSG00000040396.6|abhydrolase domain containing 13 	ENSMUST00000048216.5|Abhd13|ENSMUSG00000040396.6|abhydrolase domain containing 13
mm10_v2_chr17_-_29007925_29007962	0.196301	UAUUGCU	ENSMUST00000009138.5|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38 	ENSMUST00000119274.1|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38
mm10_v2_chr16_-_97922582_97922633	0.192886	UAUUGCU	ENSMUST00000170757.1|C2cd2|ENSMUSG00000045975.7|C2 calcium-dependent domain containing 2
mm10_v2_chr17_+_42315947_42315947	0.188999	UAUUGCU	ENSMUST00000048691.4|Ptchd4|ENSMUSG00000042256.4|patched domain containing 4
mm10_v2_chr13_+_37826225_37826315	0.186463	UAUUGCU	ENSMUST00000128570.1|Rreb1|ENSMUSG00000039087.10|ras responsive element binding protein 1
mm10_v2_chr10_-_81025406_81025411	0.186161	UAUUGCU	ENSMUST00000055125.4|Diras1|ENSMUSG00000043670.4|DIRAS family, GTP-binding RAS-like 1
mm10_v2_chr11_+_72796164_72796246	0.185908	UAUUGCU	ENSMUST00000172220.1|Zzef1|ENSMUSG00000055670.7|zinc finger, ZZ-type with EF hand domain 1
mm10_v2_chr12_+_3426857_3426931	0.183987	UAUUGCU	ENSMUST00000111215.3|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000092003.5|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000144247.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000153102.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila)
mm10_v2_chr7_-_19562377_19562401	0.183002	UAUUGCU	ENSMUST00000058444.8|Ppp1r37|ENSMUSG00000051403.8|protein phosphatase 1, regulatory subunit 37
mm10_v2_chr3_-_142881942_142882017	0.182381	UAUUGCU	ENSMUST00000043812.8|Pkn2|ENSMUSG00000004591.10|protein kinase N2
mm10_v2_chr14_-_100149764_100149764	0.182274	UAUUGCU	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr18_-_88894322_88894371	0.181845	UAUUGCU	ENSMUST00000070116.5|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6 	ENSMUST00000125362.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr14_-_31417666_31417678	0.180171	UAUUGCU	ENSMUST00000100730.3|Sh3bp5|ENSMUSG00000021892.8|SH3-domain binding protein 5 (BTK-associated)
mm10_v2_chr15_+_66891477_66891508	0.179365	UAUUGCU	ENSMUST00000118823.1|Wisp1|ENSMUSG00000005124.3|WNT1 inducible signaling pathway protein 1
mm10_v2_chr2_-_63184253_63184292	0.177377	UAUUGCU	ENSMUST00000075052.3|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7 	ENSMUST00000112454.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr3_-_122619663_122619680	0.175592	UAUUGCU	ENSMUST00000162409.1|Fnbp1l|ENSMUSG00000039735.9|formin binding protein 1-like
mm10_v2_chr2_+_126034647_126034665	0.17427	UAUUGCU	ENSMUST00000064794.7|Fgf7|ENSMUSG00000027208.8|fibroblast growth factor 7
mm10_v2_chr14_-_12823031_12823133	0.172734	UAUUGCU	ENSMUST00000067491.6|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000177814.1|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000112658.1|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000112657.2|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator
mm10_v2_chr18_-_9450097_9450161	0.172446	UAUUGCU	ENSMUST00000053917.4|Ccny|ENSMUSG00000024286.7|cyclin Y
mm10_v2_chr8_+_88118747_88118777	0.171483	UAUUGCU	ENSMUST00000095214.3|Cnep1r1|ENSMUSG00000036810.10|CTD nuclear envelope phosphatase 1 regulatory subunit 1
mm10_v2_chr6_-_22356068_22356175	0.166246	UAUUGCU	ENSMUST00000163963.1|Fam3c|ENSMUSG00000029672.10|family with sequence similarity 3, member C 	ENSMUST00000165576.1|Fam3c|ENSMUSG00000029672.10|family with sequence similarity 3, member C
mm10_v2_chr12_-_59219725_59219776	0.165108	UAUUGCU	ENSMUST00000043204.7|Fbxo33|ENSMUSG00000035329.7|F-box protein 33
mm10_v2_chr12_-_41485751_41485751	0.162297	UAUUGCU	ENSMUST00000043884.4|Lrrn3|ENSMUSG00000036295.4|leucine rich repeat protein 3, neuronal
mm10_v2_chr4_-_34614886_34614944	0.162004	UAUUGCU	ENSMUST00000140334.1|Orc3|ENSMUSG00000040044.5|origin recognition complex, subunit 3 	ENSMUST00000108142.1|Orc3|ENSMUSG00000040044.5|origin recognition complex, subunit 3 	ENSMUST00000048706.3|Orc3|ENSMUSG00000040044.5|origin recognition complex, subunit 3
mm10_v2_chr2_+_74681991_74682007	0.161517	UAUUGCU	ENSMUST00000142312.1|Hoxd11|ENSMUSG00000042499.12|homeobox D11
mm10_v2_chrX_+_73673150_73673242	0.160949	UAUUGCU	ENSMUST00000033752.7|Slc6a8|ENSMUSG00000019558.8|solute carrier family 6 (neurotransmitter transporter, creatine), member 8 	ENSMUST00000114467.2|Slc6a8|ENSMUSG00000019558.8|solute carrier family 6 (neurotransmitter transporter, creatine), member 8
mm10_v2_chr10_-_128645965_128645991	0.160662	UAUUGCU	ENSMUST00000133342.1|Ikzf4|ENSMUSG00000002578.9|IKAROS family zinc finger 4
mm10_v2_chr2_+_172549581_172549605	0.158271	UAUUGCU	ENSMUST00000030391.2|Tfap2c|ENSMUSG00000028640.5|transcription factor AP-2, gamma
mm10_v2_chr2_+_72285637_72285749	0.158105	UAUUGCU	ENSMUST00000090824.5|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK 	ENSMUST00000135469.1|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK
mm10_v2_chrX_-_111697069_111697127	0.156774	UAUUGCU	ENSMUST00000113422.2|Hdx|ENSMUSG00000034551.6|highly divergent homeobox 	ENSMUST00000038472.5|Hdx|ENSMUSG00000034551.6|highly divergent homeobox
mm10_v2_chr10_-_127666673_127666746	0.156737	UAUUGCU	ENSMUST00000026469.2|Nab2|ENSMUSG00000025402.6|Ngfi-A binding protein 2
mm10_v2_chr15_-_89171120_89171120	0.156564	UAUUGCU	ENSMUST00000109331.1|Plxnb2|ENSMUSG00000036606.10|plexin B2
mm10_v2_chr9_+_40269430_40269441	0.156386	UAUUGCU	ENSMUST00000171835.2|Scn3b|ENSMUSG00000049281.9|sodium channel, voltage-gated, type III, beta
mm10_v2_chr1_-_118311132_118311221	0.151948	UAUUGCU	ENSMUST00000027623.7|Tsn|ENSMUSG00000026374.8|translin
mm10_v2_chr9_+_48985358_48985451	0.151794	UAUUGCU	ENSMUST00000047349.6|Usp28|ENSMUSG00000032267.7|ubiquitin specific peptidase 28
mm10_v2_chr5_+_67260565_67260692	0.151113	UAUUGCU	ENSMUST00000037918.5|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33 	ENSMUST00000162543.1|Tmem33|ENSMUSG00000037720.10|transmembrane protein 33
mm10_v2_chr6_+_21949571_21949683	0.147053	UAUUGCU	ENSMUST00000031680.3|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3 	ENSMUST00000115389.1|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3 	ENSMUST00000151473.1|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3
mm10_v2_chr9_-_25151772_25151840	0.146575	UAUUGCU	ENSMUST00000008573.7|Herpud2|ENSMUSG00000008429.7|HERPUD family member 2
mm10_v2_chr5_+_110176640_110176701	0.145721	UAUUGCU	ENSMUST00000112512.1|Golga3|ENSMUSG00000029502.8|golgi autoantigen, golgin subfamily a, 3
mm10_v2_chr1_+_6487231_6487338	0.145616	UAUUGCU	ENSMUST00000140079.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000131494.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr7_+_137437591_137437649	0.144766	UAUUGCU	ENSMUST00000064404.6|Glrx3|ENSMUSG00000031068.7|glutaredoxin 3
mm10_v2_chr4_-_82505749_82505802	0.143536	UAUUGCU	ENSMUST00000107245.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107246.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr3_-_108911687_108911746	0.142055	UAUUGCU	ENSMUST00000029480.8|Prpf38b|ENSMUSG00000027881.8|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
mm10_v2_chr4_-_119294520_119294604	0.14161	UAUUGCU	ENSMUST00000079644.6|Ybx1|ENSMUSG00000028639.8|Y box protein 1
mm10_v2_chr1_+_134560190_134560213	0.14077	UAUUGCU	ENSMUST00000112198.1|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B 	ENSMUST00000112197.1|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B
mm10_v2_chr2_+_122028544_122028563	0.13585	UAUUGCU	ENSMUST00000028668.7|Eif3j1|ENSMUSG00000027236.8|eukaryotic translation initiation factor 3, subunit J1
mm10_v2_chr10_-_67548944_67549001	0.133919	UAUUGCU	ENSMUST00000075686.4|Ado|ENSMUSG00000057134.4|2-aminoethanethiol (cysteamine) dioxygenase
mm10_v2_chr9_-_50617428_50617467	0.132718	UAUUGCU	ENSMUST00000131351.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000171462.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr11_-_6475992_6476102	0.13106	UAUUGCU	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr18_-_67724560_67724599	0.130214	UAUUGCU	ENSMUST00000120934.1|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2 	ENSMUST00000025420.7|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2 	ENSMUST00000122412.1|Ptpn2|ENSMUSG00000024539.11|protein tyrosine phosphatase, non-receptor type 2
mm10_v2_chr1_+_131910458_131910539	0.129632	UAUUGCU	ENSMUST00000062264.6|Nucks1|ENSMUSG00000026434.6|nuclear casein kinase and cyclin-dependent kinase substrate 1
mm10_v2_chr2_+_93642307_93642388	0.128286	UAUUGCU	ENSMUST00000042078.3|Alx4|ENSMUSG00000040310.6|aristaless-like homeobox 4 	ENSMUST00000111254.1|Alx4|ENSMUSG00000040310.6|aristaless-like homeobox 4
mm10_v2_chr13_+_41606216_41606216	0.127227	UAUUGCU	ENSMUST00000129449.1|Tmem170b|ENSMUSG00000087370.2|transmembrane protein 170B
mm10_v2_chr1_-_80340480_80340512	0.12687	UAUUGCU	ENSMUST00000163119.1|Cul3|ENSMUSG00000004364.8|cullin 3
mm10_v2_chr9_-_51008936_51009080	0.124697	UAUUGCU	ENSMUST00000176824.1|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2 	ENSMUST00000176663.1|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2 	ENSMUST00000041375.10|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2
mm10_v2_chr9_-_117252450_117252489	0.123321	UAUUGCU	ENSMUST00000111773.3|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein 	ENSMUST00000068962.7|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein 	ENSMUST00000044901.7|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein
mm10_v2_chr11_-_93968293_93968308	0.122059	UAUUGCU	ENSMUST00000170303.1|Gm20390|ENSMUSG00000091228.1|predicted gene 20390
mm10_v2_chr7_+_120677579_120677630	0.12139	UAUUGCU	ENSMUST00000060175.6|BC030336|ENSMUSG00000046096.6|cDNA sequence BC030336
mm10_v2_chr7_+_46396439_46396539	0.12089	UAUUGCU	ENSMUST00000025202.6|Kcnc1|ENSMUSG00000058975.6|potassium voltage gated channel, Shaw-related subfamily, member 1
mm10_v2_chr3_+_88685785_88685796	0.119745	UAUUGCU	ENSMUST00000029696.6|2810403A07Rik|ENSMUSG00000028060.10|RIKEN cDNA 2810403A07 gene
mm10_v2_chr10_+_59879556_59879613	0.119425	UAUUGCU	ENSMUST00000147914.1|Dnajb12|ENSMUSG00000020109.7|DnaJ (Hsp40) homolog, subfamily B, member 12 	ENSMUST00000146590.1|Dnajb12|ENSMUSG00000020109.7|DnaJ (Hsp40) homolog, subfamily B, member 12
mm10_v2_chr15_+_79108911_79108982	0.119305	UAUUGCU	ENSMUST00000040320.8|Micall1|ENSMUSG00000033039.9|microtubule associated monooxygenase, calponin and LIM domain containing -like 1
mm10_v2_chr4_+_136469755_136469850	0.118839	UAUUGCU	ENSMUST00000170102.1|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1 	ENSMUST00000105849.2|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1 	ENSMUST00000129230.2|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1
mm10_v2_chr6_-_91411341_91411363	0.118643	UAUUGCU	ENSMUST00000032180.6|Wnt7a|ENSMUSG00000030093.6|wingless-related MMTV integration site 7A
mm10_v2_chr15_-_82016134_82016170	0.115493	UAUUGCU	ENSMUST00000152227.1|Desi1|ENSMUSG00000022472.10|desumoylating isopeptidase 1
mm10_v2_chr5_+_121397936_121398004	0.115071	UAUUGCU	ENSMUST00000042163.8|Naa25|ENSMUSG00000042719.11|N(alpha)-acetyltransferase 25, NatB auxiliary subunit
mm10_v2_chr18_+_35965036_35965087	0.114364	UAUUGCU	ENSMUST00000176873.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2 	ENSMUST00000177432.1|Psd2|ENSMUSG00000024347.10|pleckstrin and Sec7 domain containing 2
mm10_v2_chr4_+_118428078_118428194	0.11387	UAUUGCU	ENSMUST00000006557.6|Elovl1|ENSMUSG00000006390.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 	ENSMUST00000167636.1|Elovl1|ENSMUSG00000006390.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 	ENSMUST00000102673.4|Elovl1|ENSMUSG00000006390.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
mm10_v2_chr12_-_118301429_118301458	0.113868	UAUUGCU	ENSMUST00000026367.9|Sp4|ENSMUSG00000025323.9|trans-acting transcription factor 4
mm10_v2_chr3_-_73056943_73056943	0.109887	UAUUGCU	ENSMUST00000059407.7|Slitrk3|ENSMUSG00000048304.7|SLIT and NTRK-like family, member 3
mm10_v2_chr16_-_37384915_37384931	0.108934	UAUUGCU	ENSMUST00000114787.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114782.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000023526.2|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114775.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like
mm10_v2_chr2_-_26352067_26352115	0.108902	UAUUGCU	ENSMUST00000028295.8|Dnlz|ENSMUSG00000075467.4|DNL-type zinc finger
mm10_v2_chr9_+_45430293_45430379	0.108582	UAUUGCU	ENSMUST00000034592.8|Dscaml1|ENSMUSG00000032087.9|Down syndrome cell adhesion molecule like 1
mm10_v2_chr10_+_43479140_43479194	0.107998	UAUUGCU	ENSMUST00000167488.1|Bend3|ENSMUSG00000038214.8|BEN domain containing 3 	ENSMUST00000040147.7|Bend3|ENSMUSG00000038214.8|BEN domain containing 3
mm10_v2_chr6_+_149408973_149409038	0.107418	UAUUGCU	ENSMUST00000086829.4|Bicd1|ENSMUSG00000003452.9|bicaudal D homolog 1 (Drosophila) 	ENSMUST00000111513.2|Bicd1|ENSMUSG00000003452.9|bicaudal D homolog 1 (Drosophila)
mm10_v2_chr8_-_46152159_46152159	0.106596	UAUUGCU	ENSMUST00000110378.2|Snx25|ENSMUSG00000038291.10|sorting nexin 25
mm10_v2_chr12_+_24651346_24651409	0.105918	UAUUGCU	ENSMUST00000020982.5|Klf11|ENSMUSG00000020653.5|Kruppel-like factor 11
mm10_v2_chr19_+_29522263_29522341	0.105711	UAUUGCU	ENSMUST00000043610.6|C030046E11Rik|ENSMUSG00000038658.9|RIKEN cDNA C030046E11 gene 	ENSMUST00000162184.1|C030046E11Rik|ENSMUSG00000038658.9|RIKEN cDNA C030046E11 gene
mm10_v2_chr11_-_97187872_97187926	0.103532	UAUUGCU	ENSMUST00000001479.4|Kpnb1|ENSMUSG00000001440.5|karyopherin (importin) beta 1
mm10_v2_chr9_-_87731248_87731273	0.103316	UAUUGCU	ENSMUST00000034991.7|Tbx18|ENSMUSG00000032419.7|T-box18
mm10_v2_chrX_-_141725181_141725263	0.102931	UAUUGCU	ENSMUST00000067841.7|Irs4|ENSMUSG00000054667.7|insulin receptor substrate 4
mm10_v2_chr9_+_118926453_118926568	0.101978	UAUUGCU	ENSMUST00000073109.5|Ctdspl|ENSMUSG00000047409.7|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
mm10_v2_chr8_+_72161101_72161200	0.0994461	UAUUGCU	ENSMUST00000003121.8|Rab8a|ENSMUSG00000003037.10|RAB8A, member RAS oncogene family
mm10_v2_chr9_+_72532214_72532271	0.098078	UAUUGCU	ENSMUST00000163401.2|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7 	ENSMUST00000093820.3|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7
mm10_v2_chr10_+_81136223_81136271	0.0965072	UAUUGCU	ENSMUST00000048128.8|Zbtb7a|ENSMUSG00000035011.9|zinc finger and BTB domain containing 7a
mm10_v2_chr1_-_72874877_72874891	0.0958862	UAUUGCU	ENSMUST00000027377.8|Igfbp5|ENSMUSG00000026185.8|insulin-like growth factor binding protein 5
mm10_v2_chr11_+_95712673_95712673	0.0955021	UAUUGCU	ENSMUST00000107717.1|Zfp652|ENSMUSG00000075595.3|zinc finger protein 652
mm10_v2_chr13_+_88821472_88821520	0.0927664	UAUUGCU	ENSMUST00000118731.1|Edil3|ENSMUSG00000034488.8|EGF-like repeats and discoidin I-like domains 3 	ENSMUST00000081769.6|Edil3|ENSMUSG00000034488.8|EGF-like repeats and discoidin I-like domains 3
mm10_v2_chr19_+_59458372_59458450	0.0926438	UAUUGCU	ENSMUST00000062216.3|Emx2|ENSMUSG00000043969.4|empty spiracles homeobox 2
mm10_v2_chr11_-_100762928_100762936	0.0916696	UAUUGCU	ENSMUST00000107360.2|Hcrt|ENSMUSG00000045471.4|hypocretin 	ENSMUST00000055083.3|Hcrt|ENSMUSG00000045471.4|hypocretin
mm10_v2_chr1_+_172148015_172148048	0.0915001	UAUUGCU	ENSMUST00000074144.5|Dcaf8|ENSMUSG00000026554.10|DDB1 and CUL4 associated factor 8
mm10_v2_chr2_+_153291404_153291459	0.0906924	UAUUGCU	ENSMUST00000028977.6|Kif3b|ENSMUSG00000027475.9|kinesin family member 3B
mm10_v2_chr5_+_29569208_29569267	0.0893353	UAUUGCU	ENSMUST00000049453.4|Ube3c|ENSMUSG00000039000.4|ubiquitin protein ligase E3C
mm10_v2_chr17_-_10319324_10319380	0.0887754	UAUUGCU	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr6_-_142702259_142702290	0.0880968	UAUUGCU	ENSMUST00000073173.5|Abcc9|ENSMUSG00000030249.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 9 	ENSMUST00000111771.1|Abcc9|ENSMUSG00000030249.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 9 	ENSMUST00000087527.4|Abcc9|ENSMUSG00000030249.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 9 	ENSMUST00000100827.2|Abcc9|ENSMUSG00000030249.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
mm10_v2_chr5_+_65537209_65537233	0.087004	UAUUGCU	ENSMUST00000142407.1|Ube2k|ENSMUSG00000029203.10|ubiquitin-conjugating enzyme E2K
mm10_v2_chr19_+_22448242_22448283	0.0861784	UAUUGCU	ENSMUST00000037901.6|Trpm3|ENSMUSG00000052387.9|transient receptor potential cation channel, subfamily M, member 3
mm10_v2_chr9_+_4309719_4309748	0.0850481	UAUUGCU	ENSMUST00000049648.7|Kbtbd3|ENSMUSG00000025893.7|kelch repeat and BTB (POZ) domain containing 3
mm10_v2_chr16_-_16560201_16560223	0.0848034	UAUUGCU	ENSMUST00000162045.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000162124.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000161861.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4
mm10_v2_chr15_-_38519227_38519271	0.0847256	UAUUGCU	ENSMUST00000110328.1|Azin1|ENSMUSG00000037458.8|antizyme inhibitor 1 	ENSMUST00000110329.1|Azin1|ENSMUSG00000037458.8|antizyme inhibitor 1 	ENSMUST00000065308.5|Azin1|ENSMUSG00000037458.8|antizyme inhibitor 1
mm10_v2_chr4_+_48124903_48124938	0.0832406	UAUUGCU	ENSMUST00000107721.1|Stx17|ENSMUSG00000061455.7|syntaxin 17 	ENSMUST00000153502.1|Stx17|ENSMUSG00000061455.7|syntaxin 17 	ENSMUST00000107720.2|Stx17|ENSMUSG00000061455.7|syntaxin 17 	ENSMUST00000064765.4|Stx17|ENSMUSG00000061455.7|syntaxin 17
mm10_v2_chr1_+_164249023_164249051	0.0814281	UAUUGCU	ENSMUST00000044021.5|Slc19a2|ENSMUSG00000040918.6|solute carrier family 19 (thiamine transporter), member 2
mm10_v2_chr2_-_113217051_113217094	0.0810507	UAUUGCU	ENSMUST00000080673.5|Ryr3|ENSMUSG00000057378.8|ryanodine receptor 3
mm10_v2_chr5_-_124425907_124425946	0.0810049	UAUUGCU	ENSMUST00000065263.5|Sbno1|ENSMUSG00000038095.9|sno, strawberry notch homolog 1 (Drosophila)
mm10_v2_chr2_-_38287347_38287394	0.0805628	UAUUGCU	ENSMUST00000102787.3|Dennd1a|ENSMUSG00000035392.11|DENN/MADD domain containing 1A
mm10_v2_chr11_-_69801716_69801857	0.0791971	UAUUGCU	ENSMUST00000011285.4|Fgf11|ENSMUSG00000042826.7|fibroblast growth factor 11 	ENSMUST00000102585.1|Fgf11|ENSMUSG00000042826.7|fibroblast growth factor 11
mm10_v2_chr1_+_63445842_63445943	0.0784358	UAUUGCU	ENSMUST00000087374.3|Adam23|ENSMUSG00000025964.9|a disintegrin and metallopeptidase domain 23 	ENSMUST00000114107.1|Adam23|ENSMUSG00000025964.9|a disintegrin and metallopeptidase domain 23 	ENSMUST00000182642.1|Adam23|ENSMUSG00000025964.9|a disintegrin and metallopeptidase domain 23
mm10_v2_chr1_+_104768510_104768529	0.078218	UAUUGCU	ENSMUST00000062528.8|Cdh20|ENSMUSG00000050840.8|cadherin 20
mm10_v2_chr5_+_114100308_114100369	0.0779816	UAUUGCU	ENSMUST00000031588.7|Usp30|ENSMUSG00000029592.7|ubiquitin specific peptidase 30
mm10_v2_chr12_+_11265867_11265886	0.0778123	UAUUGCU	ENSMUST00000020931.5|Smc6|ENSMUSG00000020608.6|structural maintenance of chromosomes 6
mm10_v2_chr3_+_137341067_137341095	0.0776665	UAUUGCU	ENSMUST00000122064.1|Emcn|ENSMUSG00000054690.11|endomucin
mm10_v2_chr7_+_141949982_141950086	0.0765205	UAUUGCU	ENSMUST00000105989.2|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000075528.5|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2 	ENSMUST00000174499.1|Brsk2|ENSMUSG00000053046.8|BR serine/threonine kinase 2
mm10_v2_chr7_+_79273201_79273270	0.0762874	UAUUGCU	ENSMUST00000037315.6|Abhd2|ENSMUSG00000039202.6|abhydrolase domain containing 2
mm10_v2_chr10_+_103367748_103367836	0.075477	UAUUGCU	ENSMUST00000074204.4|Slc6a15|ENSMUSG00000019894.7|solute carrier family 6 (neurotransmitter transporter), member 15 	ENSMUST00000179636.1|Slc6a15|ENSMUSG00000019894.7|solute carrier family 6 (neurotransmitter transporter), member 15
mm10_v2_chr16_-_32079270_32079368	0.0750515	UAUUGCU	ENSMUST00000023467.8|Pak2|ENSMUSG00000022781.8|p21 protein (Cdc42/Rac)-activated kinase 2
mm10_v2_chr1_-_131097535_131097576	0.0750501	UAUUGCU	ENSMUST00000016672.4|Mapkapk2|ENSMUSG00000016528.4|MAP kinase-activated protein kinase 2
mm10_v2_chr13_-_45002045_45002117	0.0723616	UAUUGCU	ENSMUST00000072329.7|Dtnbp1|ENSMUSG00000057531.7|dystrobrevin binding protein 1 	ENSMUST00000110128.4|Dtnbp1|ENSMUSG00000057531.7|dystrobrevin binding protein 1
mm10_v2_chr12_+_51593315_51593357	0.0707735	UAUUGCU	ENSMUST00000164782.2|Coch|ENSMUSG00000020953.10|coagulation factor C homolog (Limulus polyphemus) 	ENSMUST00000085412.5|Coch|ENSMUSG00000020953.10|coagulation factor C homolog (Limulus polyphemus)
mm10_v2_chr19_+_10389068_10389090	0.0705043	UAUUGCU	ENSMUST00000169121.1|Syt7|ENSMUSG00000024743.8|synaptotagmin VII 	ENSMUST00000076968.3|Syt7|ENSMUSG00000024743.8|synaptotagmin VII 	ENSMUST00000073899.4|Syt7|ENSMUSG00000024743.8|synaptotagmin VII
mm10_v2_chr18_+_46741903_46741930	0.0703422	UAUUGCU	ENSMUST00000025357.7|Ap3s1|ENSMUSG00000024480.7|adaptor-related protein complex 3, sigma 1 subunit
mm10_v2_chr16_+_87698904_87698959	0.0703225	UAUUGCU	ENSMUST00000026703.5|Bach1|ENSMUSG00000025612.5|BTB and CNC homology 1
mm10_v2_chr1_+_59912972_59913027	0.0700386	UAUUGCU	ENSMUST00000036540.5|Fam117b|ENSMUSG00000041040.6|family with sequence similarity 117, member B
mm10_v2_chr15_+_89059712_89059760	0.0696718	UAUUGCU	ENSMUST00000161372.1|Panx2|ENSMUSG00000058441.7|pannexin 2 	ENSMUST00000162424.1|Panx2|ENSMUSG00000058441.7|pannexin 2
mm10_v2_chr13_+_109903089_109903110	0.0669909	UAUUGCU	ENSMUST00000120664.1|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chr7_-_141429351_141429429	0.0665449	UAUUGCU	ENSMUST00000164387.1|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1 	ENSMUST00000137488.1|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1 	ENSMUST00000084436.3|Cend1|ENSMUSG00000060240.6|cell cycle exit and neuronal differentiation 1
mm10_v2_chr5_-_143527977_143528036	0.0664331	UAUUGCU	ENSMUST00000100489.3|Rac1|ENSMUSG00000001847.8|RAS-related C3 botulinum substrate 1 	ENSMUST00000080537.7|Rac1|ENSMUSG00000001847.8|RAS-related C3 botulinum substrate 1
mm10_v2_chr13_+_94057757_94057838	0.0661152	UAUUGCU	ENSMUST00000054274.1|Lhfpl2|ENSMUSG00000045312.5|lipoma HMGIC fusion partner-like 2
mm10_v2_chr10_-_118868903_118868903	0.0660921	UAUUGCU	ENSMUST00000004281.8|Dyrk2|ENSMUSG00000028630.8|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm10_v2_chr1_+_91250311_91250380	0.0653598	UAUUGCU	ENSMUST00000059743.5|Ube2f|ENSMUSG00000034343.8|ubiquitin-conjugating enzyme E2F (putative) 	ENSMUST00000178627.1|Ube2f|ENSMUSG00000034343.8|ubiquitin-conjugating enzyme E2F (putative) 	ENSMUST00000171165.1|Ube2f|ENSMUSG00000034343.8|ubiquitin-conjugating enzyme E2F (putative)
mm10_v2_chr14_-_57746044_57746144	0.0647309	UAUUGCU	ENSMUST00000173990.1|Lats2|ENSMUSG00000021959.9|large tumor suppressor 2 	ENSMUST00000022531.7|Lats2|ENSMUSG00000021959.9|large tumor suppressor 2
mm10_v2_chr8_+_125012986_125013006	0.0646886	UAUUGCU	ENSMUST00000075896.6|Tsnax|ENSMUSG00000056820.6|translin-associated factor X
mm10_v2_chr8_+_109778554_109778558	0.0640363	UAUUGCU	ENSMUST00000093157.6|Ap1g1|ENSMUSG00000031731.10|adaptor protein complex AP-1, gamma 1 subunit
mm10_v2_chr5_+_86804214_86804276	0.0632685	UAUUGCU	ENSMUST00000119339.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1 	ENSMUST00000120498.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1
mm10_v2_chr7_+_27591513_27591562	0.0624374	UAUUGCU	ENSMUST00000108344.2|Akt2|ENSMUSG00000004056.9|thymoma viral proto-oncogene 2
mm10_v2_chr7_-_47008397_47008421	0.0612414	UAUUGCU	ENSMUST00000061639.7|Spty2d1|ENSMUSG00000049516.7|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
mm10_v2_chr11_-_4947991_4948064	0.0610087	UAUUGCU	ENSMUST00000093369.4|Nefh|ENSMUSG00000020396.8|neurofilament, heavy polypeptide
mm10_v2_chr11_+_19924354_19924375	0.0602684	UAUUGCU	ENSMUST00000093299.6|Spred2|ENSMUSG00000045671.11|sprouty-related, EVH1 domain containing 2
mm10_v2_chr13_+_43785107_43785160	0.0597866	UAUUGCU	ENSMUST00000015540.2|Cd83|ENSMUSG00000015396.3|CD83 antigen
mm10_v2_chr5_+_144100387_144100436	0.0584045	UAUUGCU	ENSMUST00000041804.7|Lmtk2|ENSMUSG00000038970.7|lemur tyrosine kinase 2
mm10_v2_chr3_-_9833653_9833679	0.0583023	UAUUGCU	ENSMUST00000161949.1|Pag1|ENSMUSG00000027508.9|phosphoprotein associated with glycosphingolipid microdomains 1
mm10_v2_chr5_+_64160207_64160220	0.0579826	UAUUGCU	ENSMUST00000101195.2|Tbc1d1|ENSMUSG00000029174.12|TBC1 domain family, member 1
mm10_v2_chr4_-_25800083_25800146	0.0567847	UAUUGCU	ENSMUST00000084770.4|Fut9|ENSMUSG00000055373.8|fucosyltransferase 9
mm10_v2_chr2_+_166906026_166906099	0.0565761	UAUUGCU	ENSMUST00000002790.7|Cse1l|ENSMUSG00000002718.8|chromosome segregation 1-like (S. cerevisiae)
mm10_v2_chr3_+_96104498_96104571	0.0560083	UAUUGCU	ENSMUST00000132980.1|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000138206.1|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000090785.2|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000035519.5|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B
mm10_v2_chr19_+_25610533_25610553	0.0555906	UAUUGCU	ENSMUST00000048935.4|Dmrt3|ENSMUSG00000042372.4|doublesex and mab-3 related transcription factor 3
mm10_v2_chr3_-_51560816_51560878	0.0550487	UAUUGCU	ENSMUST00000037141.7|Setd7|ENSMUSG00000037111.8|SET domain containing (lysine methyltransferase) 7
mm10_v2_chr5_-_75044562_75044774	0.0546967	UAUUGCU	ENSMUST00000075452.5|Chic2|ENSMUSG00000029229.7|cysteine-rich hydrophobic domain 2
mm10_v2_chr2_-_80128834_80128996	0.0534341	UAUUGCU	ENSMUST00000102654.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102655.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr6_-_137649211_137649294	0.0520096	UAUUGCU	ENSMUST00000134630.1|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8 	ENSMUST00000058210.6|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8 	ENSMUST00000111878.1|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8
mm10_v2_chr16_+_17894197_17894232	0.0511429	UAUUGCU	ENSMUST00000046937.2|Tssk1|ENSMUSG00000041566.2|testis-specific serine kinase 1
mm10_v2_chr9_+_118606687_118606751	0.0502601	UAUUGCU	ENSMUST00000044165.7|Itga9|ENSMUSG00000039115.7|integrin alpha 9
mm10_v2_chr16_+_8830093_8830104	0.0498838	UAUUGCU	ENSMUST00000023150.5|1810013L24Rik|ENSMUSG00000022507.5|RIKEN cDNA 1810013L24 gene
mm10_v2_chr6_+_87042838_87042918	0.0470642	UAUUGCU	ENSMUST00000113658.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000113657.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000113655.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000032057.7|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1
mm10_v2_chr7_-_111082997_111083037	0.0463265	UAUUGCU	ENSMUST00000161051.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000160132.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000106666.3|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000162415.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2
mm10_v2_chr3_-_117360876_117360876	0.0428313	UAUUGCU	ENSMUST00000061071.8|D3Bwg0562e|ENSMUSG00000044667.8|DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
mm10_v2_chr18_-_15718046_15718046	0.0419774	UAUUGCU	ENSMUST00000053017.6|Chst9|ENSMUSG00000047161.6|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
mm10_v2_chr13_-_37994111_37994190	0.0410693	UAUUGCU	ENSMUST00000021864.6|Ssr1|ENSMUSG00000021427.9|signal sequence receptor, alpha
mm10_v2_chr8_+_107436355_107436421	0.0403	UAUUGCU	ENSMUST00000166615.1|Wwp2|ENSMUSG00000031930.10|WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr15_+_5143861_5143896	0.0401018	UAUUGCU	ENSMUST00000051186.8|Prkaa1|ENSMUSG00000050697.8|protein kinase, AMP-activated, alpha 1 catalytic subunit
mm10_v2_chr8_+_23669653_23669671	0.0389652	UAUUGCU	ENSMUST00000042352.4|Zmat4|ENSMUSG00000037492.9|zinc finger, matrin type 4
mm10_v2_chr16_-_50432340_50432409	0.0382111	UAUUGCU	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr15_-_37961059_37961107	0.0374991	UAUUGCU	ENSMUST00000022901.9|Rrm2b|ENSMUSG00000022292.9|ribonucleotide reductase M2 B (TP53 inducible)
mm10_v2_chr15_+_82274935_82275034	0.0365241	UAUUGCU	ENSMUST00000023095.6|Sept3|ENSMUSG00000022456.9|septin 3
mm10_v2_chrY_-_1286563_1286615	0.0361541	UAUUGCU	ENSMUST00000091190.5|Ddx3y|ENSMUSG00000069045.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
mm10_v2_chr10_+_79716588_79716666	0.0358999	UAUUGCU	ENSMUST00000099513.1|Hcn2|ENSMUSG00000020331.3|hyperpolarization-activated, cyclic nucleotide-gated K+ 2 	ENSMUST00000020581.2|Hcn2|ENSMUSG00000020331.3|hyperpolarization-activated, cyclic nucleotide-gated K+ 2
mm10_v2_chr9_+_37208291_37208360	0.0353891	UAUUGCU	ENSMUST00000034632.8|Tmem218|ENSMUSG00000032121.8|transmembrane protein 218
mm10_v2_chr12_+_110737949_110738024	0.0338755	UAUUGCU	ENSMUST00000095410.2|Wdr20a|ENSMUSG00000037957.9|WD repeat domain 20A
mm10_v2_chr5_-_144965793_144965877	0.0321773	UAUUGCU	ENSMUST00000110677.1|Smurf1|ENSMUSG00000038780.8|SMAD specific E3 ubiquitin protein ligase 1 	ENSMUST00000085684.4|Smurf1|ENSMUSG00000038780.8|SMAD specific E3 ubiquitin protein ligase 1 	ENSMUST00000100461.2|Smurf1|ENSMUSG00000038780.8|SMAD specific E3 ubiquitin protein ligase 1
mm10_v2_chr5_+_108268897_108268924	0.031961	UAUUGCU	ENSMUST00000031190.4|Dr1|ENSMUSG00000029265.4|down-regulator of transcription 1
mm10_v2_chr4_+_106911470_106911511	0.0301248	UAUUGCU	ENSMUST00000030367.8|Ssbp3|ENSMUSG00000061887.8|single-stranded DNA binding protein 3 	ENSMUST00000149926.1|Ssbp3|ENSMUSG00000061887.8|single-stranded DNA binding protein 3
mm10_v2_chr11_-_98193260_98193298	0.0299595	UAUUGCU	ENSMUST00000092735.5|Med1|ENSMUSG00000018160.9|mediator complex subunit 1 	ENSMUST00000107545.2|Med1|ENSMUSG00000018160.9|mediator complex subunit 1
mm10_v2_chr12_+_111166349_111166397	0.02941	UAUUGCU	ENSMUST00000117269.1|Traf3|ENSMUSG00000021277.10|TNF receptor-associated factor 3
mm10_v2_chr7_-_105633525_105633601	0.0277941	UAUUGCU	ENSMUST00000153371.1|Trim3|ENSMUSG00000036989.9|tripartite motif-containing 3 	ENSMUST00000106789.1|Trim3|ENSMUSG00000036989.9|tripartite motif-containing 3 	ENSMUST00000057525.7|Trim3|ENSMUSG00000036989.9|tripartite motif-containing 3
mm10_v2_chrX_-_108834303_108834381	0.0251429	UAUUGCU	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chr8_+_79639618_79639730	0.0250643	UAUUGCU	ENSMUST00000173078.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4 	ENSMUST00000173286.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4
mm10_v2_chr15_-_93275151_93275178	0.024017	UAUUGCU	ENSMUST00000057896.4|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1 	ENSMUST00000049484.6|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1
mm10_v2_chr4_-_87230435_87230477	0.0201341	UAUUGCU	ENSMUST00000107157.2|Slc24a2|ENSMUSG00000037996.11|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm10_v2_chr10_+_75060885_75060901	0.0181924	UAUUGCU	ENSMUST00000164107.1|Bcr|ENSMUSG00000009681.9|breakpoint cluster region
mm10_v2_chr11_+_96271453_96271523	0.0169834	UAUUGCU	ENSMUST00000000010.8|Hoxb9|ENSMUSG00000020875.8|homeobox B9 	ENSMUST00000174042.1|Hoxb9|ENSMUSG00000020875.8|homeobox B9
mm10_v2_chr5_+_66968416_66968447	0.0168707	UAUUGCU	ENSMUST00000038188.7|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr9_-_106656081_106656109	0.0161958	UAUUGCU	ENSMUST00000023959.7|Grm2|ENSMUSG00000023192.7|glutamate receptor, metabotropic 2
mm10_v2_chr18_+_69345721_69345811	0.0143106	UAUUGCU	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr5_-_103100054_103100088	0.0135568	UAUUGCU	ENSMUST00000112848.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr15_-_76521902_76522129	0.0134122	UAUUGCU	ENSMUST00000164703.1|Scrt1|ENSMUSG00000048385.8|scratch homolog 1, zinc finger protein (Drosophila) 	ENSMUST00000096365.3|Scrt1|ENSMUSG00000048385.8|scratch homolog 1, zinc finger protein (Drosophila)
mm10_v2_chr7_+_63444741_63444762	0.0131365	UAUUGCU	ENSMUST00000058476.7|Otud7a|ENSMUSG00000033510.8|OTU domain containing 7A
mm10_v2_chr2_+_152081529_152081624	0.0128857	UAUUGCU	ENSMUST00000064061.3|Scrt2|ENSMUSG00000060257.2|scratch homolog 2, zinc finger protein (Drosophila)
mm10_v2_chr18_-_80713062_80713080	0.011851	UAUUGCU	ENSMUST00000170905.1|Nfatc1|ENSMUSG00000033016.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 	ENSMUST00000078049.4|Nfatc1|ENSMUSG00000033016.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
mm10_v2_chr16_+_13986596_13986674	0.0117863	UAUUGCU	ENSMUST00000056521.5|2900011O08Rik|ENSMUSG00000044117.6|RIKEN cDNA 2900011O08 gene 	ENSMUST00000118412.1|2900011O08Rik|ENSMUSG00000044117.6|RIKEN cDNA 2900011O08 gene 	ENSMUST00000131608.1|2900011O08Rik|ENSMUSG00000044117.6|RIKEN cDNA 2900011O08 gene
mm10_v2_chr2_-_137116624_137116644	0.0111271	UAUUGCU	ENSMUST00000028735.7|Jag1|ENSMUSG00000027276.7|jagged 1
mm10_v2_chrX_-_50942710_50942758	0.0111147	UAUUGCU	ENSMUST00000060650.5|Frmd7|ENSMUSG00000036131.6|FERM domain containing 7
mm10_v2_chr18_-_46198810_46198824	0.0108986	UAUUGCU	ENSMUST00000167364.1|Trim36|ENSMUSG00000033949.5|tripartite motif-containing 36
mm10_v2_chr12_+_84114321_84114391	0.00974923	UAUUGCU	ENSMUST00000123491.1|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1 	ENSMUST00000046340.2|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1 	ENSMUST00000136159.1|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1
mm10_v2_chr3_+_31902666_31902703	0.00840755	UAUUGCU	ENSMUST00000119970.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2 	ENSMUST00000178668.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2
mm10_v2_chr5_+_115506668_115506808	0.00766447	UAUUGCU	ENSMUST00000067268.8|Pxn|ENSMUSG00000029528.11|paxillin 	ENSMUST00000086523.3|Pxn|ENSMUSG00000029528.11|paxillin
mm10_v2_chr3_+_107101551_107101567	0.00669953	UAUUGCU	ENSMUST00000038695.1|Kcna2|ENSMUSG00000040724.1|potassium voltage-gated channel, shaker-related subfamily, member 2
mm10_v2_chr12_-_14152038_14152069	0.00638938	UAUUGCU	ENSMUST00000020926.6|Fam84a|ENSMUSG00000020607.6|family with sequence similarity 84, member A
mm10_v2_chr9_+_13827708_13827781	0.00541362	UAUUGCU	ENSMUST00000059579.5|Fam76b|ENSMUSG00000037808.6|family with sequence similarity 76, member B
mm10_v2_chr17_-_46831413_46831413	0.0049166	UAUUGCU	ENSMUST00000040624.5|Gltscr1l|ENSMUSG00000036568.6|GLTSCR1-like
mm10_v2_chr4_-_43669141_43669200	0.00440646	UAUUGCU	ENSMUST00000056474.6|Fam221b|ENSMUSG00000043633.6|family with sequence similarity 221, member B
mm10_v2_chr2_+_180582712_180582742	0.00202503	UAUUGCU	ENSMUST00000029085.8|Mrgbp|ENSMUSG00000027569.9|MRG/MORF4L binding protein
mm10_v2_chr11_-_103267405_103267472	0.00182316	UAUUGCU	ENSMUST00000021324.2|Map3k14|ENSMUSG00000020941.7|mitogen-activated protein kinase kinase kinase 14
mm10_v2_chr17_-_75551838_75551946	0.00152845	UAUUGCU	ENSMUST00000112507.3|Fam98a|ENSMUSG00000002017.9|family with sequence similarity 98, member A
mm10_v2_chr1_-_182517447_182517525	0.00102605	UAUUGCU	ENSMUST00000068505.8|Capn2|ENSMUSG00000026509.10|calpain 2
