mm10_v2_chr10_-_45470201_45470260	0.563391	UAAGACU	ENSMUST00000079390.6|Lin28b|ENSMUSG00000063804.7|lin-28 homolog B (C. elegans)
mm10_v2_chr11_+_44617310_44617336	0.482464	UAAGACU	ENSMUST00000081265.5|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000101326.3|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000109268.1|Ebf1|ENSMUSG00000057098.8|early B cell factor 1
mm10_v2_chr14_-_31577318_31577383	0.430179	UAAGACU	ENSMUST00000112027.2|Colq|ENSMUSG00000057606.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
mm10_v2_chr12_+_32378692_32378789	0.324607	UAAGACU	ENSMUST00000172332.2|Ccdc71l|ENSMUSG00000090946.2|coiled-coil domain containing 71 like
mm10_v2_chr4_+_17853451_17853474	0.304236	UAAGACU	ENSMUST00000029881.3|Mmp16|ENSMUSG00000028226.9|matrix metallopeptidase 16
mm10_v2_chr5_+_67607873_67607889	0.294939	UAAGACU	ENSMUST00000087241.5|Shisa3|ENSMUSG00000050010.7|shisa homolog 3 (Xenopus laevis)
mm10_v2_chr3_-_116424007_116424032	0.27832	UAAGACU	ENSMUST00000090464.4|Cdc14a|ENSMUSG00000033502.8|CDC14 cell division cycle 14A
mm10_v2_chr14_+_69029289_69029414	0.240713	UAAGACU	ENSMUST00000014957.8|Stc1|ENSMUSG00000014813.8|stanniocalcin 1
mm10_v2_chr17_-_6655939_6655939	0.234293	UAAGACU	ENSMUST00000179554.1|Dynlt1f|ENSMUSG00000095677.1|dynein light chain Tctex-type 1F
mm10_v2_chr17_-_51832666_51832678	0.226671	UAAGACU	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr5_+_108065742_108065767	0.221339	UAAGACU	ENSMUST00000081567.4|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000170319.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000112626.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2
mm10_v2_chr16_-_15594507_15594531	0.219649	UAAGACU	ENSMUST00000115776.1|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2 	ENSMUST00000115777.3|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2
mm10_v2_chr16_-_76373827_76373852	0.214497	UAAGACU	ENSMUST00000121927.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr1_-_97661950_97662074	0.209382	UAAGACU	ENSMUST00000053033.7|D1Ertd622e|ENSMUSG00000044768.10|DNA segment, Chr 1, ERATO Doi 622, expressed 	ENSMUST00000149927.1|D1Ertd622e|ENSMUSG00000044768.10|DNA segment, Chr 1, ERATO Doi 622, expressed
mm10_v2_chr11_+_44518959_44519000	0.204956	UAAGACU	ENSMUST00000019333.3|Rnf145|ENSMUSG00000019189.7|ring finger protein 145
mm10_v2_chr2_+_122028544_122028563	0.200337	UAAGACU	ENSMUST00000028668.7|Eif3j1|ENSMUSG00000027236.8|eukaryotic translation initiation factor 3, subunit J1
mm10_v2_chr5_+_123343834_123343970	0.198913	UAAGACU	ENSMUST00000120593.1|Bcl7a|ENSMUSG00000029438.3|B cell CLL/lymphoma 7A
mm10_v2_chr17_-_6317474_6317517	0.196556	UAAGACU	ENSMUST00000169415.1|Dynlt1a|ENSMUSG00000092074.1|dynein light chain Tctex-type 1A
mm10_v2_chr18_+_53176345_53176376	0.185405	UAAGACU	ENSMUST00000037850.5|Snx2|ENSMUSG00000034484.7|sorting nexin 2
mm10_v2_chr7_-_116038734_116038750	0.184418	UAAGACU	ENSMUST00000166877.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr12_-_69681795_69681869	0.17932	UAAGACU	ENSMUST00000183277.1|Sos2|ENSMUSG00000034801.7|son of sevenless homolog 2 (Drosophila) 	ENSMUST00000035773.7|Sos2|ENSMUSG00000034801.7|son of sevenless homolog 2 (Drosophila)
mm10_v2_chr5_-_5266038_5266292	0.179195	UAAGACU	ENSMUST00000115451.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000115452.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000131392.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr10_-_23349887_23349919	0.174439	UAAGACU	ENSMUST00000074366.6|Eya4|ENSMUSG00000010461.8|eyes absent 4 homolog (Drosophila) 	ENSMUST00000092665.4|Eya4|ENSMUSG00000010461.8|eyes absent 4 homolog (Drosophila)
mm10_v2_chr2_-_6884975_6884996	0.172136	UAAGACU	ENSMUST00000114924.3|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000170438.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000114934.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr19_+_21778325_21778363	0.162816	UAAGACU	ENSMUST00000096194.2|Tmem2|ENSMUSG00000024754.6|transmembrane protein 2 	ENSMUST00000025663.6|Tmem2|ENSMUSG00000024754.6|transmembrane protein 2
mm10_v2_chr11_+_97415527_97415538	0.156745	UAAGACU	ENSMUST00000121799.1|Arhgap23|ENSMUSG00000049807.10|Rho GTPase activating protein 23
mm10_v2_chr14_-_20546512_20546582	0.156628	UAAGACU	ENSMUST00000022355.4|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform 	ENSMUST00000161445.1|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform 	ENSMUST00000159027.1|Ppp3cb|ENSMUSG00000021816.4|protein phosphatase 3, catalytic subunit, beta isoform
mm10_v2_chr17_+_6601671_6601671	0.151612	UAAGACU	ENSMUST00000092966.4|Dynlt1c|ENSMUSG00000000579.8|dynein light chain Tctex-type 1C
mm10_v2_chr1_-_21961581_21961581	0.150817	UAAGACU	ENSMUST00000029667.6|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173058.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173404.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5
mm10_v2_chr13_-_111490111_111490139	0.138896	UAAGACU	ENSMUST00000047627.7|Gpbp1|ENSMUSG00000032745.11|GC-rich promoter binding protein 1
mm10_v2_chr1_-_119837613_119837673	0.138775	UAAGACU	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr11_+_68691906_68691915	0.138302	UAAGACU	ENSMUST00000102611.3|Myh10|ENSMUSG00000020900.9|myosin, heavy polypeptide 10, non-muscle
mm10_v2_chr11_-_6475992_6476102	0.135685	UAAGACU	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr1_+_74506044_74506105	0.134623	UAAGACU	ENSMUST00000087215.5|Rqcd1|ENSMUSG00000026174.8|rcd1 (required for cell differentiation) homolog 1 (S. pombe)
mm10_v2_chr6_-_39206782_39206831	0.131161	UAAGACU	ENSMUST00000002305.8|Jhdm1d|ENSMUSG00000042599.8|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm10_v2_chr16_-_63864114_63864182	0.124928	UAAGACU	ENSMUST00000064405.6|Epha3|ENSMUSG00000052504.6|Eph receptor A3
mm10_v2_chr4_-_56865135_56865208	0.123261	UAAGACU	ENSMUST00000107612.2|Ctnnal1|ENSMUSG00000038816.8|catenin (cadherin associated protein), alpha-like 1 	ENSMUST00000045142.8|Ctnnal1|ENSMUSG00000038816.8|catenin (cadherin associated protein), alpha-like 1
mm10_v2_chr11_-_86357570_86357614	0.118308	UAAGACU	ENSMUST00000043624.8|Med13|ENSMUSG00000034297.8|mediator complex subunit 13
mm10_v2_chr18_+_34220978_34221020	0.113043	UAAGACU	ENSMUST00000079362.5|Apc|ENSMUSG00000005871.8|adenomatosis polyposis coli 	ENSMUST00000115781.3|Apc|ENSMUSG00000005871.8|adenomatosis polyposis coli
mm10_v2_chr3_-_122984404_122984512	0.110114	UAAGACU	ENSMUST00000090379.2|Usp53|ENSMUSG00000039701.7|ubiquitin specific peptidase 53
mm10_v2_chr14_-_105176860_105176918	0.109845	UAAGACU	ENSMUST00000163545.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr6_-_54566484_54566491	0.106982	UAAGACU	ENSMUST00000019268.4|Scrn1|ENSMUSG00000019124.4|secernin 1
mm10_v2_chr12_-_91590009_91590056	0.099895	UAAGACU	ENSMUST00000021345.6|Gtf2a1|ENSMUSG00000020962.7|general transcription factor II A, 1
mm10_v2_chr7_-_66689589_66689603	0.0966147	UAAGACU	ENSMUST00000124899.1|Asb7|ENSMUSG00000030509.10|ankyrin repeat and SOCS box-containing 7
mm10_v2_chr4_+_141147911_141147971	0.0941548	UAAGACU	ENSMUST00000030757.9|Fbxo42|ENSMUSG00000028920.9|F-box protein 42
mm10_v2_chr4_-_41314877_41314889	0.0894625	UAAGACU	ENSMUST00000030145.8|Dcaf12|ENSMUSG00000028436.8|DDB1 and CUL4 associated factor 12
mm10_v2_chr9_+_32696005_32696121	0.0869404	UAAGACU	ENSMUST00000034534.6|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000050797.7|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000184887.1|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain
mm10_v2_chr19_-_14597983_14598016	0.085165	UAAGACU	ENSMUST00000052011.7|Tle4|ENSMUSG00000024642.10|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm10_v2_chr6_-_100287441_100287465	0.0810234	UAAGACU	ENSMUST00000101118.2|Rybp|ENSMUSG00000072872.2|RING1 and YY1 binding protein
mm10_v2_chr17_+_29549783_29549798	0.0800287	UAAGACU	ENSMUST00000048677.7|Tbc1d22b|ENSMUSG00000042203.7|TBC1 domain family, member 22B
mm10_v2_chr2_+_74691090_74691090	0.0791715	UAAGACU	ENSMUST00000061745.3|Hoxd10|ENSMUSG00000050368.3|homeobox D10
mm10_v2_chr9_-_72111827_72111895	0.0786846	UAAGACU	ENSMUST00000183404.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184783.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr2_+_74711911_74711939	0.0758384	UAAGACU	ENSMUST00000111983.2|Hoxd3|ENSMUSG00000079277.3|homeobox D3
mm10_v2_chr6_-_99666762_99666786	0.0629443	UAAGACU	ENSMUST00000032151.2|Eif4e3|ENSMUSG00000093661.1|eukaryotic translation initiation factor 4E member 3
mm10_v2_chr10_-_115315546_115315615	0.0627564	UAAGACU	ENSMUST00000020343.7|Rab21|ENSMUSG00000020132.9|RAB21, member RAS oncogene family
mm10_v2_chr4_-_139131058_139131113	0.061938	UAAGACU	ENSMUST00000143971.1|Minos1|ENSMUSG00000050608.5|mitochondrial inner membrane organizing system 1
mm10_v2_chr2_-_125782834_125782870	0.0591177	UAAGACU	ENSMUST00000053699.6|Secisbp2l|ENSMUSG00000035093.10|SECIS binding protein 2-like
mm10_v2_chr2_-_37647199_37647285	0.0577414	UAAGACU	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr1_+_82586942_82586988	0.0524881	UAAGACU	ENSMUST00000113457.2|Col4a3|ENSMUSG00000079465.2|collagen, type IV, alpha 3
mm10_v2_chr17_+_29093763_29093781	0.0510674	UAAGACU	ENSMUST00000023829.6|Cdkn1a|ENSMUSG00000023067.7|cyclin-dependent kinase inhibitor 1A (P21)
mm10_v2_chr15_-_93275151_93275178	0.050145	UAAGACU	ENSMUST00000057896.4|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1 	ENSMUST00000049484.6|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1
mm10_v2_chr13_-_107890059_107890073	0.0493133	UAAGACU	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr3_-_79567679_79567764	0.0488444	UAAGACU	ENSMUST00000076136.4|Fnip2|ENSMUSG00000061175.5|folliculin interacting protein 2
mm10_v2_chr11_+_54438188_54438220	0.0469324	UAAGACU	ENSMUST00000046835.7|Fnip1|ENSMUSG00000035992.9|folliculin interacting protein 1
mm10_v2_chr10_+_95940663_95940703	0.042681	UAAGACU	ENSMUST00000053484.6|Eea1|ENSMUSG00000036499.8|early endosome antigen 1
mm10_v2_chr11_-_19018956_19018973	0.0373098	UAAGACU	ENSMUST00000068264.7|Meis1|ENSMUSG00000020160.12|Meis homeobox 1 	ENSMUST00000144988.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1 	ENSMUST00000185131.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1
mm10_v2_chr8_+_117257019_117257107	0.0361275	UAAGACU	ENSMUST00000166750.1|Cmip|ENSMUSG00000034390.9|c-Maf inducing protein
mm10_v2_chr6_+_38433913_38433965	0.0329822	UAAGACU	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr6_+_77242644_77242697	0.0188603	UAAGACU	ENSMUST00000159616.1|Lrrtm1|ENSMUSG00000060780.2|leucine rich repeat transmembrane neuronal 1
mm10_v2_chr3_+_89520152_89520175	0.0187649	UAAGACU	ENSMUST00000000811.7|Kcnn3|ENSMUSG00000000794.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm10_v2_chr7_-_111082997_111083037	0.00602772	UAAGACU	ENSMUST00000161051.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000160132.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000106666.3|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000162415.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2
mm10_v2_chr8_+_90828820_90828842	0.00538126	UAAGACU	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr11_-_82829024_82829043	0.00526335	UAAGACU	ENSMUST00000021036.6|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000074515.4|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000103218.2|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein
mm10_v2_chr4_+_123904832_123904851	0.00391586	UAAGACU	ENSMUST00000030400.7|Mycbp|ENSMUSG00000028647.7|c-myc binding protein
mm10_v2_chr4_-_126429501_126429556	0.00353172	UAAGACU	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr9_+_72532214_72532271	0.000422548	UAAGACU	ENSMUST00000163401.2|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7 	ENSMUST00000093820.3|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7
mm10_v2_chr9_-_64737623_64737645	5.79018e-05	UAAGACU	ENSMUST00000169058.1|Rab11a|ENSMUSG00000004771.6|RAB11a, member RAS oncogene family
