mm10_v2_chr17_+_36942910_36942924	16.5091	Twist1	ENSMUST00000040498.5|Rnf39|ENSMUSG00000036492.6|ring finger protein 39
mm10_v2_chr17_+_36943025_36943055	11.9784	Twist1	ENSMUST00000173072.1|Rnf39|ENSMUSG00000036492.6|ring finger protein 39
mm10_v2_chr6_-_41035501_41035514	10.8186	Twist1	ENSMUST00000031931.5|2210010C04Rik|ENSMUSG00000029882.5|RIKEN cDNA 2210010C04 gene
mm10_v2_chr6_+_30639218_30639218	10.0681	Twist1	ENSMUST00000031806.9|Cpa1|ENSMUSG00000054446.8|carboxypeptidase A1, pancreatic
mm10_v2_chr8_-_105933832_105933862	9.7049	Twist1	ENSMUST00000034368.6|Ctrl|ENSMUSG00000031896.6|chymotrypsin-like
mm10_v2_chr19_+_39007019_39007093	9.67574	Twist1	ENSMUST00000025966.4|Cyp2c55|ENSMUSG00000025002.5|cytochrome P450, family 2, subfamily c, polypeptide 55
mm10_v2_chr11_-_113710017_113710061	7.46646	Twist1	ENSMUST00000018871.1|Cpsf4l|ENSMUSG00000018727.13|cleavage and polyadenylation specific factor 4-like
mm10_v2_chr2_+_31887262_31887344	6.83035	Twist1	ENSMUST00000138325.1|Lamc3|ENSMUSG00000026840.8|laminin gamma 3 	ENSMUST00000028187.6|Lamc3|ENSMUSG00000026840.8|laminin gamma 3
mm10_v2_chr7_+_44384803_44384868	6.44769	Twist1	ENSMUST00000120262.1|Syt3|ENSMUSG00000030731.7|synaptotagmin III
mm10_v2_chr11_-_113709520_113709528	6.28539	Twist1	ENSMUST00000173655.1|Cpsf4l|ENSMUSG00000018727.13|cleavage and polyadenylation specific factor 4-like 	ENSMUST00000100248.4|Cpsf4l|ENSMUSG00000018727.13|cleavage and polyadenylation specific factor 4-like
mm10_v2_chr7_-_142679533_142679726	5.57521	Twist1	ENSMUST00000162317.1|Ins2|ENSMUSG00000000215.4|insulin II 	ENSMUST00000125933.1|Ins2|ENSMUSG00000000215.4|insulin II 	ENSMUST00000105931.1|Ins2|ENSMUSG00000000215.4|insulin II 	ENSMUST00000105930.1|Ins2|ENSMUSG00000000215.4|insulin II 	ENSMUST00000105933.1|Ins2|ENSMUSG00000000215.4|insulin II 	ENSMUST00000105932.1|Ins2|ENSMUSG00000000215.4|insulin II 	ENSMUST00000000220.2|Ins2|ENSMUSG00000000215.4|insulin II
mm10_v2_chr9_-_45009590_45009645	5.24184	Twist1	ENSMUST00000102832.1|Cd3e|ENSMUSG00000032093.6|CD3 antigen, epsilon polypeptide
mm10_v2_chr15_+_100304782_100304848	4.8731	Twist1	ENSMUST00000067752.3|Mettl7a1|ENSMUSG00000054619.6|methyltransferase like 7A1
mm10_v2_chr18_-_16809233_16809324	4.20672	Twist1	ENSMUST00000025166.7|Cdh2|ENSMUSG00000024304.8|cadherin 2
mm10_v2_chr15_+_100353149_100353200	4.0696	Twist1	ENSMUST00000075675.5|AB099516|ENSMUSG00000093789.1|cDNA sequence AB099516 	ENSMUST00000088142.5|Mettl7a2|ENSMUSG00000056487.8|methyltransferase like 7A2 	ENSMUST00000176287.1|Mettl7a2|ENSMUSG00000056487.8|methyltransferase like 7A2
mm10_v2_chr12_-_4592927_4592927	4.01408	Twist1	ENSMUST00000170816.1|Gm3625|ENSMUSG00000091619.1|predicted gene 3625
mm10_v2_chr9_+_65265173_65265187	3.80514	Twist1	ENSMUST00000048762.1|Cilp|ENSMUSG00000042254.8|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase
mm10_v2_chr7_-_31115227_31115308	3.76772	Twist1	ENSMUST00000168884.1|Hpn|ENSMUSG00000001249.8|hepsin 	ENSMUST00000108102.2|Hpn|ENSMUSG00000001249.8|hepsin
mm10_v2_chr6_-_95718800_95718837	3.62772	Twist1	ENSMUST00000079847.5|Suclg2|ENSMUSG00000061838.5|succinate-Coenzyme A ligase, GDP-forming, beta subunit
mm10_v2_chr7_+_127800844_127800941	3.48776	Twist1	ENSMUST00000106271.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 	ENSMUST00000138432.1|Hsd3b7|ENSMUSG00000042289.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
mm10_v2_chr19_+_8664005_8664120	3.36501	Twist1	ENSMUST00000035444.3|Chrm1|ENSMUSG00000032773.3|cholinergic receptor, muscarinic 1, CNS 	ENSMUST00000163785.1|Chrm1|ENSMUSG00000032773.3|cholinergic receptor, muscarinic 1, CNS
mm10_v2_chr16_-_18426372_18426389	2.94669	Twist1	ENSMUST00000000335.4|Comt|ENSMUSG00000000326.6|catechol-O-methyltransferase
mm10_v2_chr7_-_4789541_4789656	2.86331	Twist1	ENSMUST00000168578.1|Tmem238|ENSMUSG00000030431.7|transmembrane protein 238
mm10_v2_chr5_-_34187670_34187749	2.83201	Twist1	ENSMUST00000042701.6|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4 	ENSMUST00000119171.1|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4
mm10_v2_chr1_-_15892657_15892729	2.82155	Twist1	ENSMUST00000040695.4|Sbspon|ENSMUSG00000032719.4|somatomedin B and thrombospondin, type 1 domain containing
mm10_v2_chr4_-_57143437_57143624	2.73094	Twist1	ENSMUST00000095076.3|Epb4.1l4b|ENSMUSG00000028434.6|erythrocyte protein band 4.1-like 4b 	ENSMUST00000030142.3|Epb4.1l4b|ENSMUSG00000028434.6|erythrocyte protein band 4.1-like 4b
mm10_v2_chr4_-_130275542_130275590	2.72752	Twist1	ENSMUST00000154846.1|Serinc2|ENSMUSG00000023232.11|serine incorporator 2 	ENSMUST00000105996.1|Serinc2|ENSMUSG00000023232.11|serine incorporator 2
mm10_v2_chr4_-_130275523_130275537	2.61379	Twist1	ENSMUST00000146478.1|Serinc2|ENSMUSG00000023232.11|serine incorporator 2
mm10_v2_chr2_-_32982007_32982086	2.55152	Twist1	ENSMUST00000028129.7|Slc2a8|ENSMUSG00000026791.9|solute carrier family 2, (facilitated glucose transporter), member 8
mm10_v2_chr14_+_53676141_53676141	2.53116	Twist1	ENSMUST00000103662.4|Trav9-4|ENSMUSG00000096678.2|T cell receptor alpha variable 9-4
mm10_v2_chr19_-_28963863_28963908	2.52497	Twist1	ENSMUST00000161813.1|4430402I18Rik|ENSMUSG00000064202.9|RIKEN cDNA 4430402I18 gene
mm10_v2_chr8_+_122422020_122422020	2.24733	Twist1	ENSMUST00000050963.3|Il17c|ENSMUSG00000046108.3|interleukin 17C
mm10_v2_chr8_+_105305572_105305619	2.24691	Twist1	ENSMUST00000109375.2|Elmo3|ENSMUSG00000014791.9|engulfment and cell motility 3
mm10_v2_chr13_+_104109752_104109829	2.22227	Twist1	ENSMUST00000160322.1|Sgtb|ENSMUSG00000042743.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta 	ENSMUST00000159574.1|Sgtb|ENSMUSG00000042743.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
mm10_v2_chr13_+_73626886_73627001	2.20962	Twist1	ENSMUST00000022104.7|Tert|ENSMUSG00000021611.8|telomerase reverse transcriptase
mm10_v2_chr7_-_80401707_80401754	2.17966	Twist1	ENSMUST00000120753.1|Furin|ENSMUSG00000030530.9|furin (paired basic amino acid cleaving enzyme)
mm10_v2_chr13_+_104109737_104109746	2.17963	Twist1	ENSMUST00000044385.7|Sgtb|ENSMUSG00000042743.7|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
mm10_v2_chr17_+_24850484_24850495	2.07426	Twist1	ENSMUST00000118788.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase
mm10_v2_chr9_-_63602417_63602460	2.07093	Twist1	ENSMUST00000171243.1|Iqch|ENSMUSG00000037801.7|IQ motif containing H 	ENSMUST00000163982.1|Iqch|ENSMUSG00000037801.7|IQ motif containing H 	ENSMUST00000163624.1|Iqch|ENSMUSG00000037801.7|IQ motif containing H
mm10_v2_chr17_+_24850654_24850683	2.02447	Twist1	ENSMUST00000130989.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase 	ENSMUST00000024974.9|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase
mm10_v2_chr8_-_71381907_71381977	1.91991	Twist1	ENSMUST00000002466.8|Nr2f6|ENSMUSG00000002393.8|nuclear receptor subfamily 2, group F, member 6
mm10_v2_chr11_+_97663366_97663414	1.91221	Twist1	ENSMUST00000044730.5|Mllt6|ENSMUSG00000038437.5|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
mm10_v2_chr7_+_28180272_28180316	1.88302	Twist1	ENSMUST00000173223.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr7_+_28180226_28180266	1.86135	Twist1	ENSMUST00000172467.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr2_-_172940299_172940349	1.81247	Twist1	ENSMUST00000009143.7|Bmp7|ENSMUSG00000008999.7|bone morphogenetic protein 7
mm10_v2_chr9_+_60794468_60794577	1.77114	Twist1	ENSMUST00000050183.6|Uaca|ENSMUSG00000034485.9|uveal autoantigen with coiled-coil domains and ankyrin repeats
mm10_v2_chr6_+_40964760_40964781	1.74785	Twist1	ENSMUST00000076638.5|1810009J06Rik|ENSMUSG00000094808.1|RIKEN cDNA 1810009J06 gene
mm10_v2_chr7_+_4119556_4119596	1.68808	Twist1	ENSMUST00000079415.5|Ttyh1|ENSMUSG00000030428.10|tweety homolog 1 (Drosophila)
mm10_v2_chr3_+_90051630_90051636	1.6577	Twist1	ENSMUST00000159064.1|4933434E20Rik|ENSMUSG00000027942.10|RIKEN cDNA 4933434E20 gene
mm10_v2_chr9_-_108567336_108567359	1.64414	Twist1	ENSMUST00000074208.4|Ndufaf3|ENSMUSG00000070283.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3
mm10_v2_chr9_-_114844090_114844171	1.60084	Twist1	ENSMUST00000047013.3|Cmtm8|ENSMUSG00000041012.3|CKLF-like MARVEL transmembrane domain containing 8
mm10_v2_chrX_-_18461371_18461402	1.57905	Twist1	ENSMUST00000044188.4|4930578C19Rik|ENSMUSG00000037358.6|RIKEN cDNA 4930578C19 gene
mm10_v2_chr15_+_100334929_100334929	1.56531	Twist1	ENSMUST00000075420.4|Mettl7a3|ENSMUSG00000058057.4|methyltransferase like 7A3
mm10_v2_chr5_+_31297551_31297586	1.54729	Twist1	ENSMUST00000072228.5|Gckr|ENSMUSG00000059434.5|glucokinase regulatory protein
mm10_v2_chr11_+_103103051_103103115	1.54606	Twist1	ENSMUST00000152971.1|Acbd4|ENSMUSG00000056938.10|acyl-Coenzyme A binding domain containing 4
mm10_v2_chr2_+_139678178_139678178	1.52658	Twist1	ENSMUST00000184404.1|Ism1|ENSMUSG00000074766.4|isthmin 1 homolog (zebrafish) 	ENSMUST00000099307.3|Ism1|ENSMUSG00000074766.4|isthmin 1 homolog (zebrafish)
mm10_v2_chr6_-_40999479_40999498	1.49917	Twist1	ENSMUST00000166306.1|Gm2663|ENSMUSG00000096525.1|predicted gene 2663
mm10_v2_chr16_-_5132458_5132483	1.48111	Twist1	ENSMUST00000035672.3|Ppl|ENSMUSG00000039457.3|periplakin
mm10_v2_chr7_+_35119285_35119301	1.47077	Twist1	ENSMUST00000042985.9|Cebpa|ENSMUSG00000034957.9|CCAAT/enhancer binding protein (C/EBP), alpha
mm10_v2_chr17_+_45563928_45563973	1.44061	Twist1	ENSMUST00000041353.6|Slc35b2|ENSMUSG00000037089.9|solute carrier family 35, member B2
mm10_v2_chr11_-_119355484_119355536	1.40321	Twist1	ENSMUST00000100172.2|Sgsh|ENSMUSG00000005043.7|N-sulfoglucosamine sulfohydrolase (sulfamidase) 	ENSMUST00000005173.4|Sgsh|ENSMUSG00000005043.7|N-sulfoglucosamine sulfohydrolase (sulfamidase)
mm10_v2_chr15_-_57892358_57892483	1.26868	Twist1	ENSMUST00000022993.5|Derl1|ENSMUSG00000022365.5|Der1-like domain family, member 1
mm10_v2_chr19_-_3686549_3686586	1.25765	Twist1	ENSMUST00000025856.10|Lrp5|ENSMUSG00000024913.10|low density lipoprotein receptor-related protein 5 	ENSMUST00000176867.1|Lrp5|ENSMUSG00000024913.10|low density lipoprotein receptor-related protein 5
mm10_v2_chr1_-_172590463_172590568	1.24713	Twist1	ENSMUST00000065679.6|Slamf8|ENSMUSG00000053318.6|SLAM family member 8
mm10_v2_chr7_+_4119525_4119555	1.22095	Twist1	ENSMUST00000119661.1|Ttyh1|ENSMUSG00000030428.10|tweety homolog 1 (Drosophila) 	ENSMUST00000129423.1|Ttyh1|ENSMUSG00000030428.10|tweety homolog 1 (Drosophila)
mm10_v2_chr1_+_171437535_171437566	1.22052	Twist1	ENSMUST00000043839.4|F11r|ENSMUSG00000038235.4|F11 receptor
mm10_v2_chr13_-_58113592_58113620	1.19512	Twist1	ENSMUST00000160860.1|Klhl3|ENSMUSG00000014164.8|kelch-like 3
mm10_v2_chr6_+_85187438_85187510	1.18234	Twist1	ENSMUST00000045942.8|Emx1|ENSMUSG00000033726.8|empty spiracles homeobox 1
mm10_v2_chr14_+_101729907_101729958	1.16873	Twist1	ENSMUST00000100337.3|Lmo7|ENSMUSG00000033060.9|LIM domain only 7
mm10_v2_chr13_-_104109576_104109619	1.14514	Twist1	ENSMUST00000109315.3|Nln|ENSMUSG00000021710.10|neurolysin (metallopeptidase M3 family)
mm10_v2_chr10_+_89873497_89873672	1.11686	Twist1	ENSMUST00000183156.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182936.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000099368.4|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr11_+_94741782_94741782	1.10825	Twist1	ENSMUST00000021240.6|Cdc34-ps|ENSMUSG00000020870.6|cell division cycle 34 homolog, pseudogene (S. cerevisiae)
mm10_v2_chr5_-_62766153_62766246	1.07259	Twist1	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr6_-_43309554_43309554	0.982967	Twist1	ENSMUST00000031749.9|Nobox|ENSMUSG00000029736.9|NOBOX oogenesis homeobox
mm10_v2_chr6_-_83831736_83831750	0.971175	Twist1	ENSMUST00000058383.8|Paip2b|ENSMUSG00000045896.8|poly(A) binding protein interacting protein 2B
mm10_v2_chr11_+_53770458_53770509	0.935086	Twist1	ENSMUST00000138913.1|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1 	ENSMUST00000123376.1|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1 	ENSMUST00000019043.6|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1 	ENSMUST00000133291.1|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1
mm10_v2_chr9_-_14903932_14903949	0.93079	Twist1	ENSMUST00000034409.7|Folr4|ENSMUSG00000031933.11|folate receptor 4 (delta) 	ENSMUST00000117620.1|Folr4|ENSMUSG00000031933.11|folate receptor 4 (delta)
mm10_v2_chr14_+_62760496_62760521	0.922471	Twist1	ENSMUST00000181344.1|4931440J10Rik|ENSMUSG00000097775.1|RIKEN cDNA 4931440J10 gene
mm10_v2_chr4_+_149518216_149518277	0.910562	Twist1	ENSMUST00000030839.6|Ctnnbip1|ENSMUSG00000028988.7|catenin beta interacting protein 1
mm10_v2_chr2_-_32784424_32784446	0.904685	Twist1	ENSMUST00000102813.1|1700019L03Rik|ENSMUSG00000038987.8|RIKEN cDNA 1700019L03 gene
mm10_v2_chr15_-_53902472_53902530	0.892262	Twist1	ENSMUST00000078673.6|Samd12|ENSMUSG00000058656.6|sterile alpha motif domain containing 12
mm10_v2_chr6_+_122874526_122874573	0.881597	Twist1	ENSMUST00000032477.4|Necap1|ENSMUSG00000030327.6|NECAP endocytosis associated 1
mm10_v2_chr4_-_135494499_135494583	0.871681	Twist1	ENSMUST00000105856.2|Nipal3|ENSMUSG00000028803.12|NIPA-like domain containing 3
mm10_v2_chr2_+_74668207_74668310	0.834841	Twist1	ENSMUST00000001872.4|Hoxd13|ENSMUSG00000001819.4|homeobox D13
mm10_v2_chr10_+_61175206_61175262	0.829209	Twist1	ENSMUST00000079235.5|Tbata|ENSMUSG00000020096.13|thymus, brain and testes associated
mm10_v2_chr5_-_8622855_8622952	0.822706	Twist1	ENSMUST00000047485.8|Rundc3b|ENSMUSG00000040570.8|RUN domain containing 3B 	ENSMUST00000115378.1|Rundc3b|ENSMUSG00000040570.8|RUN domain containing 3B
mm10_v2_chr6_-_90716489_90716543	0.816869	Twist1	ENSMUST00000101153.3|Iqsec1|ENSMUSG00000034312.7|IQ motif and Sec7 domain 1
mm10_v2_chr2_-_26122769_26122838	0.785309	Twist1	ENSMUST00000140993.1|Nacc2|ENSMUSG00000026932.8|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing 	ENSMUST00000028300.5|Nacc2|ENSMUSG00000026932.8|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm10_v2_chr6_-_134566913_134566995	0.760467	Twist1	ENSMUST00000032322.8|Lrp6|ENSMUSG00000030201.9|low density lipoprotein receptor-related protein 6
mm10_v2_chr9_-_14903752_14903772	0.757137	Twist1	ENSMUST00000148155.1|Folr4|ENSMUSG00000031933.11|folate receptor 4 (delta) 	ENSMUST00000121116.1|Folr4|ENSMUSG00000031933.11|folate receptor 4 (delta)
mm10_v2_chr17_-_70990751_70990819	0.744385	Twist1	ENSMUST00000038446.8|Myl12b|ENSMUSG00000034868.8|myosin, light chain 12B, regulatory
mm10_v2_chr7_-_30861470_30861470	0.685463	Twist1	ENSMUST00000052700.3|Ffar1|ENSMUSG00000044453.3|free fatty acid receptor 1
mm10_v2_chr9_+_118478851_118478866	0.677341	Twist1	ENSMUST00000150633.1|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr19_-_11266122_11266161	0.672783	Twist1	ENSMUST00000169159.1|Ms4a1|ENSMUSG00000024673.8|membrane-spanning 4-domains, subfamily A, member 1
mm10_v2_chr19_+_5740885_5740904	0.668105	Twist1	ENSMUST00000081496.5|Ltbp3|ENSMUSG00000024940.10|latent transforming growth factor beta binding protein 3
mm10_v2_chr11_-_70687917_70687981	0.664937	Twist1	ENSMUST00000108545.2|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000120261.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000036299.7|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000119120.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000100933.3|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2
mm10_v2_chr4_-_11386757_11386783	0.65062	Twist1	ENSMUST00000108313.1|Esrp1|ENSMUSG00000040728.9|epithelial splicing regulatory protein 1 	ENSMUST00000108311.2|Esrp1|ENSMUSG00000040728.9|epithelial splicing regulatory protein 1
mm10_v2_chr7_-_70360593_70360746	0.642487	Twist1	ENSMUST00000032768.7|Nr2f2|ENSMUSG00000030551.7|nuclear receptor subfamily 2, group F, member 2
mm10_v2_chr5_-_35729276_35729276	0.633652	Twist1	ENSMUST00000070203.7|Sh3tc1|ENSMUSG00000036553.10|SH3 domain and tetratricopeptide repeats 1
mm10_v2_chr15_+_100227819_100227856	0.620263	Twist1	ENSMUST00000023769.4|Atf1|ENSMUSG00000023027.6|activating transcription factor 1
mm10_v2_chr17_-_65613521_65613555	0.551131	Twist1	ENSMUST00000024897.8|Vapa|ENSMUSG00000024091.8|vesicle-associated membrane protein, associated protein A
mm10_v2_chr4_-_148038769_148038821	0.529067	Twist1	ENSMUST00000030879.5|Clcn6|ENSMUSG00000029016.7|chloride channel 6 	ENSMUST00000137724.1|Clcn6|ENSMUSG00000029016.7|chloride channel 6
mm10_v2_chr9_-_14903866_14903884	0.513812	Twist1	ENSMUST00000069408.3|Folr4|ENSMUSG00000031933.11|folate receptor 4 (delta)
mm10_v2_chr9_+_111118070_111118183	0.508954	Twist1	ENSMUST00000035078.6|Lrrfip2|ENSMUSG00000032497.9|leucine rich repeat (in FLII) interacting protein 2 	ENSMUST00000098340.2|Lrrfip2|ENSMUSG00000032497.9|leucine rich repeat (in FLII) interacting protein 2
mm10_v2_chr4_+_119539652_119539698	0.503888	Twist1	ENSMUST00000044564.8|Foxj3|ENSMUSG00000032998.10|forkhead box J3 	ENSMUST00000162267.1|Foxj3|ENSMUSG00000032998.10|forkhead box J3 	ENSMUST00000106310.2|Foxj3|ENSMUSG00000032998.10|forkhead box J3 	ENSMUST00000138845.2|Foxj3|ENSMUSG00000032998.10|forkhead box J3
mm10_v2_chr9_-_57467985_57468074	0.475476	Twist1	ENSMUST00000046587.6|Scamp5|ENSMUSG00000040722.6|secretory carrier membrane protein 5
mm10_v2_chr11_-_76179499_76179649	0.474727	Twist1	ENSMUST00000167114.1|Vps53|ENSMUSG00000017288.9|vacuolar protein sorting 53 (yeast) 	ENSMUST00000094015.4|Vps53|ENSMUSG00000017288.9|vacuolar protein sorting 53 (yeast) 	ENSMUST00000108419.2|Vps53|ENSMUSG00000017288.9|vacuolar protein sorting 53 (yeast) 	ENSMUST00000170730.1|Vps53|ENSMUSG00000017288.9|vacuolar protein sorting 53 (yeast) 	ENSMUST00000129256.1|Vps53|ENSMUSG00000017288.9|vacuolar protein sorting 53 (yeast) 	ENSMUST00000056601.4|Vps53|ENSMUSG00000017288.9|vacuolar protein sorting 53 (yeast)
mm10_v2_chr2_+_85991819_85991819	0.449211	Twist1	ENSMUST00000050942.2|Olfr1031|ENSMUSG00000043267.2|olfactory receptor 1031
mm10_v2_chrX_+_157818435_157818435	0.424713	Twist1	ENSMUST00000087157.4|Klhl34|ENSMUSG00000047485.6|kelch-like 34
mm10_v2_chr18_+_40256960_40257018	0.423935	Twist1	ENSMUST00000096572.1|2900055J20Rik|ENSMUSG00000071860.1|RIKEN cDNA 2900055J20 gene
mm10_v2_chr7_-_4844665_4844699	0.423543	Twist1	ENSMUST00000066041.5|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis) 	ENSMUST00000172377.1|Shisa7|ENSMUSG00000053550.7|shisa homolog 7 (Xenopus laevis)
mm10_v2_chr2_-_137116624_137116644	0.419206	Twist1	ENSMUST00000028735.7|Jag1|ENSMUSG00000027276.7|jagged 1
mm10_v2_chr11_+_109650574_109650579	0.416897	Twist1	ENSMUST00000106676.1|Prkar1a|ENSMUSG00000020612.10|protein kinase, cAMP dependent regulatory, type I, alpha
mm10_v2_chr11_+_72207537_72207620	0.403901	Twist1	ENSMUST00000021158.3|Txndc17|ENSMUSG00000020803.3|thioredoxin domain containing 17
mm10_v2_chr2_-_142901506_142901576	0.403882	Twist1	ENSMUST00000043589.7|Kif16b|ENSMUSG00000038844.8|kinesin family member 16B
mm10_v2_chr19_+_25610533_25610553	0.397372	Twist1	ENSMUST00000048935.4|Dmrt3|ENSMUSG00000042372.4|doublesex and mab-3 related transcription factor 3
mm10_v2_chr2_-_85519018_85519033	0.391788	Twist1	ENSMUST00000099923.1|4833423E24Rik|ENSMUSG00000075217.1|RIKEN cDNA 4833423E24 gene
mm10_v2_chr6_-_29165003_29165008	0.3574	Twist1	ENSMUST00000007993.9|Rbm28|ENSMUSG00000029701.9|RNA binding motif protein 28
mm10_v2_chr15_+_100227871_100227878	0.34519	Twist1	ENSMUST00000163855.1|Atf1|ENSMUSG00000023027.6|activating transcription factor 1
mm10_v2_chr16_+_62814676_62814703	0.338588	Twist1	ENSMUST00000055557.5|Stx19|ENSMUSG00000047854.5|syntaxin 19
mm10_v2_chr18_+_77065195_77065250	0.334927	Twist1	ENSMUST00000114777.2|Pias2|ENSMUSG00000025423.9|protein inhibitor of activated STAT 2
mm10_v2_chr11_-_102406783_102406955	0.309402	Twist1	ENSMUST00000155104.1|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39 	ENSMUST00000130436.1|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39
mm10_v2_chr8_-_105413473_105413526	0.308048	Twist1	ENSMUST00000167294.1|Kctd19|ENSMUSG00000051648.7|potassium channel tetramerisation domain containing 19 	ENSMUST00000063071.6|Kctd19|ENSMUSG00000051648.7|potassium channel tetramerisation domain containing 19
mm10_v2_chr16_+_18811772_18811832	0.305638	Twist1	ENSMUST00000168822.1|Ufd1l|ENSMUSG00000005262.6|ubiquitin fusion degradation 1 like 	ENSMUST00000115578.3|Ufd1l|ENSMUSG00000005262.6|ubiquitin fusion degradation 1 like
mm10_v2_chr7_+_82867327_82867357	0.28906	Twist1	ENSMUST00000082237.5|Mex3b|ENSMUSG00000057706.6|mex3 homolog B (C. elegans)
mm10_v2_chr2_-_33942111_33942151	0.273801	Twist1	ENSMUST00000130988.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403 	ENSMUST00000127936.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403 	ENSMUST00000134271.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403
mm10_v2_chr11_-_99851608_99851632	0.272027	Twist1	ENSMUST00000107437.1|Krtap4-16|ENSMUSG00000046474.9|keratin associated protein 4-16
mm10_v2_chr3_-_86002491_86002507	0.234615	Twist1	ENSMUST00000061343.3|Prss48|ENSMUSG00000049013.3|protease, serine, 48
mm10_v2_chr14_+_101653967_101654048	0.208767	Twist1	ENSMUST00000002289.6|Uchl3|ENSMUSG00000022111.8|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
mm10_v2_chr12_+_4592992_4593087	0.208622	Twist1	ENSMUST00000062580.7|Itsn2|ENSMUSG00000020640.9|intersectin 2
mm10_v2_chr8_+_119910792_119910857	0.202898	Twist1	ENSMUST00000108988.2|Usp10|ENSMUSG00000031826.13|ubiquitin specific peptidase 10 	ENSMUST00000127664.1|Gm20388|ENSMUSG00000092329.1|predicted gene 20388 	ENSMUST00000108982.4|Usp10|ENSMUSG00000031826.13|ubiquitin specific peptidase 10
mm10_v2_chr11_+_58009064_58009144	0.200056	Twist1	ENSMUST00000071487.6|Larp1|ENSMUSG00000037331.9|La ribonucleoprotein domain family, member 1 	ENSMUST00000178636.1|Larp1|ENSMUSG00000037331.9|La ribonucleoprotein domain family, member 1
mm10_v2_chr8_-_117082449_117082449	0.167822	Twist1	ENSMUST00000098375.4|Pkd1l2|ENSMUSG00000034416.12|polycystic kidney disease 1 like 2 	ENSMUST00000109093.2|Pkd1l2|ENSMUSG00000034416.12|polycystic kidney disease 1 like 2
mm10_v2_chr13_-_98891036_98891063	0.132343	Twist1	ENSMUST00000109399.2|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr4_-_11386679_11386702	0.119577	Twist1	ENSMUST00000043781.7|Esrp1|ENSMUSG00000040728.9|epithelial splicing regulatory protein 1 	ENSMUST00000108310.1|Esrp1|ENSMUSG00000040728.9|epithelial splicing regulatory protein 1
mm10_v2_chr14_-_50930803_50930878	0.0997124	Twist1	ENSMUST00000160538.1|Tmem55b|ENSMUSG00000035953.7|transmembrane protein 55b 	ENSMUST00000162957.1|Tmem55b|ENSMUSG00000035953.7|transmembrane protein 55b 	ENSMUST00000161166.1|Tmem55b|ENSMUSG00000035953.7|transmembrane protein 55b 	ENSMUST00000160835.1|Tmem55b|ENSMUSG00000035953.7|transmembrane protein 55b 	ENSMUST00000049312.7|Tmem55b|ENSMUSG00000035953.7|transmembrane protein 55b
mm10_v2_chr8_-_64693027_64693040	0.0964471	Twist1	ENSMUST00000048967.7|Cpe|ENSMUSG00000037852.7|carboxypeptidase E
