mm10_v2_chr19_+_20601958_20601974	7.34843	T	ENSMUST00000087638.3|Aldh1a1|ENSMUSG00000053279.6|aldehyde dehydrogenase family 1, subfamily A1
mm10_v2_chr19_+_37697792_37697808	5.44137	T	ENSMUST00000025946.5|Cyp26a1|ENSMUSG00000024987.5|cytochrome P450, family 26, subfamily a, polypeptide 1
mm10_v2_chr9_-_78355743_78355788	4.45741	T	ENSMUST00000125479.1|Gsta2|ENSMUSG00000057933.4|glutathione S-transferase, alpha 2 (Yc2)
mm10_v2_chr10_+_88459569_88459670	4.27972	T	ENSMUST00000020252.3|Sycp3|ENSMUSG00000020059.3|synaptonemal complex protein 3 	ENSMUST00000125612.1|Sycp3|ENSMUSG00000020059.3|synaptonemal complex protein 3
mm10_v2_chr15_-_60921270_60921288	4.18618	T	ENSMUST00000096418.3|A1bg|ENSMUSG00000022347.7|alpha-1-B glycoprotein
mm10_v2_chr15_+_9335550_9335623	3.95743	T	ENSMUST00000072403.6|Ugt3a2|ENSMUSG00000049152.11|UDP glycosyltransferases 3 family, polypeptide A2
mm10_v2_chr5_-_87337165_87337203	3.57271	T	ENSMUST00000031195.2|Ugt2a3|ENSMUSG00000035780.2|UDP glucuronosyltransferase 2 family, polypeptide A3
mm10_v2_chr19_-_20727533_20727568	3.55716	T	ENSMUST00000025656.3|Aldh1a7|ENSMUSG00000024747.3|aldehyde dehydrogenase family 1, subfamily A7
mm10_v2_chr3_-_107943705_107943749	2.70799	T	ENSMUST00000106680.1|Gstm6|ENSMUSG00000068762.5|glutathione S-transferase, mu 6 	ENSMUST00000106684.1|Gstm6|ENSMUSG00000068762.5|glutathione S-transferase, mu 6 	ENSMUST00000106685.2|Gstm6|ENSMUSG00000068762.5|glutathione S-transferase, mu 6
mm10_v2_chr11_-_94392917_94392983	2.69355	T	ENSMUST00000178136.1|Abcc3|ENSMUSG00000020865.10|ATP-binding cassette, sub-family C (CFTR/MRP), member 3 	ENSMUST00000021231.7|Abcc3|ENSMUSG00000020865.10|ATP-binding cassette, sub-family C (CFTR/MRP), member 3
mm10_v2_chr7_+_45259031_45259031	2.61212	T	ENSMUST00000179310.1|Slc6a16|ENSMUSG00000094152.1|solute carrier family 6, member 16
mm10_v2_chr16_-_18413452_18413494	2.55035	T	ENSMUST00000165430.1|Comt|ENSMUSG00000000326.6|catechol-O-methyltransferase 	ENSMUST00000147720.1|Comt|ENSMUSG00000000326.6|catechol-O-methyltransferase
mm10_v2_chr1_+_88106834_88106862	2.4519	T	ENSMUST00000113137.1|Ugt1a6b|ENSMUSG00000090145.1|UDP glucuronosyltransferase 1 family, polypeptide A6B
mm10_v2_chr10_-_24101951_24101951	2.3134	T	ENSMUST00000170267.1|Taar8c|ENSMUSG00000096204.1|trace amine-associated receptor 8C
mm10_v2_chr1_+_88138364_88138378	2.3097	T	ENSMUST00000014263.4|Ugt1a6a|ENSMUSG00000054545.11|UDP glucuronosyltransferase 1 family, polypeptide A6A
mm10_v2_chr3_-_108017877_108017973	2.0936	T	ENSMUST00000004140.4|Gstm1|ENSMUSG00000058135.6|glutathione S-transferase, mu 1
mm10_v2_chr1_-_105356658_105356714	1.97478	T	ENSMUST00000058688.5|Rnf152|ENSMUSG00000047496.5|ring finger protein 152 	ENSMUST00000172299.1|Rnf152|ENSMUSG00000047496.5|ring finger protein 152
mm10_v2_chr15_-_82407187_82407203	1.96172	T	ENSMUST00000072776.3|Cyp2d10|ENSMUSG00000094806.1|cytochrome P450, family 2, subfamily d, polypeptide 10
mm10_v2_chr11_-_74925925_74925985	1.82754	T	ENSMUST00000121738.1|Srr|ENSMUSG00000001323.11|serine racemase
mm10_v2_chr19_-_4498574_4498596	1.79821	T	ENSMUST00000048482.6|2010003K11Rik|ENSMUSG00000042041.6|RIKEN cDNA 2010003K11 gene
mm10_v2_chr6_+_90333270_90333306	1.78737	T	ENSMUST00000164761.1|Uroc1|ENSMUSG00000034456.9|urocanase domain containing 1 	ENSMUST00000046128.9|Uroc1|ENSMUSG00000034456.9|urocanase domain containing 1
mm10_v2_chr5_-_108132513_108132538	1.72726	T	ENSMUST00000119784.1|Tmed5|ENSMUSG00000063406.5|transmembrane emp24 protein transport domain containing 5 	ENSMUST00000117759.1|Tmed5|ENSMUSG00000063406.5|transmembrane emp24 protein transport domain containing 5
mm10_v2_chrX_-_139782353_139782368	1.68165	T	ENSMUST00000101217.3|Ripply1|ENSMUSG00000072945.3|ripply1 homolog (zebrafish)
mm10_v2_chr9_+_50494516_50494533	1.63817	T	ENSMUST00000114474.1|1600029D21Rik|ENSMUSG00000032068.8|RIKEN cDNA 1600029D21 gene
mm10_v2_chrX_-_143933089_143933142	1.62749	T	ENSMUST00000087313.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr9_+_37613806_37613858	1.53188	T	ENSMUST00000002007.3|Siae|ENSMUSG00000001942.7|sialic acid acetylesterase
mm10_v2_chr2_-_148046896_148046991	1.48505	T	ENSMUST00000172928.1|Foxa2|ENSMUSG00000037025.5|forkhead box A2 	ENSMUST00000047315.3|Foxa2|ENSMUSG00000037025.5|forkhead box A2
mm10_v2_chr19_-_28963863_28963908	1.44592	T	ENSMUST00000161813.1|4430402I18Rik|ENSMUSG00000064202.9|RIKEN cDNA 4430402I18 gene
mm10_v2_chr14_-_16243309_16243344	1.3117	T	ENSMUST00000112625.1|Oxsm|ENSMUSG00000021786.6|3-oxoacyl-ACP synthase, mitochondrial
mm10_v2_chr7_-_72306595_72306647	1.30567	T	ENSMUST00000079323.5|Mctp2|ENSMUSG00000032776.7|multiple C2 domains, transmembrane 2
mm10_v2_chr5_-_31093500_31093615	1.29987	T	ENSMUST00000031037.7|Slc30a3|ENSMUSG00000029151.8|solute carrier family 30 (zinc transporter), member 3
mm10_v2_chr9_-_43239816_43239842	1.29066	T	ENSMUST00000034512.5|Oaf|ENSMUSG00000032014.5|OAF homolog (Drosophila)
mm10_v2_chr16_+_93607831_93607896	1.20434	T	ENSMUST00000039659.8|Cbr1|ENSMUSG00000051483.8|carbonyl reductase 1
mm10_v2_chr8_-_70212251_70212265	1.14817	T	ENSMUST00000063788.7|Slc25a42|ENSMUSG00000002346.10|solute carrier family 25, member 42
mm10_v2_chrX_+_139610612_139610632	1.13651	T	ENSMUST00000113026.1|Rnf128|ENSMUSG00000031438.5|ring finger protein 128
mm10_v2_chr2_-_51973219_51973234	1.06805	T	ENSMUST00000028314.2|Nmi|ENSMUSG00000026946.3|N-myc (and STAT) interactor
mm10_v2_chr8_-_70212268_70212305	1.06165	T	ENSMUST00000110127.1|Slc25a42|ENSMUSG00000002346.10|solute carrier family 25, member 42
mm10_v2_chr15_+_102966794_102966812	1.06046	T	ENSMUST00000001699.7|Hoxc10|ENSMUSG00000022484.7|homeobox C10
mm10_v2_chr2_-_181202789_181202789	1.04549	T	ENSMUST00000016511.5|Ptk6|ENSMUSG00000038751.5|PTK6 protein tyrosine kinase 6
mm10_v2_chr3_+_40950631_40950657	1.01425	T	ENSMUST00000048490.6|Larp1b|ENSMUSG00000037814.9|La ribonucleoprotein domain family, member 1B
mm10_v2_chr2_+_160880642_160880670	1.00965	T	ENSMUST00000109456.2|Lpin3|ENSMUSG00000027412.6|lipin 3
mm10_v2_chr9_+_67759423_67759437	1.00951	T	ENSMUST00000171652.1|C2cd4b|ENSMUSG00000091956.1|C2 calcium-dependent domain containing 4B
mm10_v2_chr4_-_12087912_12088011	0.992797	T	ENSMUST00000050686.3|Tmem67|ENSMUSG00000049488.8|transmembrane protein 67
mm10_v2_chr13_-_93674300_93674309	0.987423	T	ENSMUST00000015941.7|Bhmt2|ENSMUSG00000042118.7|betaine-homocysteine methyltransferase 2
mm10_v2_chr2_-_27248335_27248346	0.983835	T	ENSMUST00000139312.1|Sardh|ENSMUSG00000009614.10|sarcosine dehydrogenase
mm10_v2_chr3_+_90231588_90231663	0.982517	T	ENSMUST00000029546.8|Jtb|ENSMUSG00000027937.9|jumping translocation breakpoint 	ENSMUST00000119304.1|Jtb|ENSMUSG00000027937.9|jumping translocation breakpoint
mm10_v2_chr12_+_28675220_28675239	0.954111	T	ENSMUST00000020957.6|Adi1|ENSMUSG00000020629.6|acireductone dioxygenase 1
mm10_v2_chr7_-_74554474_74554681	0.951228	T	ENSMUST00000134539.1|Slco3a1|ENSMUSG00000025790.8|solute carrier organic anion transporter family, member 3a1 	ENSMUST00000026897.7|Slco3a1|ENSMUSG00000025790.8|solute carrier organic anion transporter family, member 3a1 	ENSMUST00000098371.2|Slco3a1|ENSMUSG00000025790.8|solute carrier organic anion transporter family, member 3a1
mm10_v2_chr7_-_140882274_140882330	0.928297	T	ENSMUST00000026559.7|Sirt3|ENSMUSG00000025486.10|sirtuin 3
mm10_v2_chr5_-_38491948_38491961	0.918681	T	ENSMUST00000129099.1|Slc2a9|ENSMUSG00000005107.7|solute carrier family 2 (facilitated glucose transporter), member 9
mm10_v2_chr4_-_129239165_129239194	0.864993	T	ENSMUST00000097873.3|C77080|ENSMUSG00000050390.6|expressed sequence C77080
mm10_v2_chr15_-_81360739_81360816	0.861285	T	ENSMUST00000023040.7|Slc25a17|ENSMUSG00000022404.7|solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17
mm10_v2_chr2_-_51972990_51973022	0.853861	T	ENSMUST00000145481.1|Nmi|ENSMUSG00000026946.3|N-myc (and STAT) interactor 	ENSMUST00000112705.2|Nmi|ENSMUSG00000026946.3|N-myc (and STAT) interactor
mm10_v2_chr4_-_129227883_129227923	0.830354	T	ENSMUST00000106051.1|C77080|ENSMUSG00000050390.6|expressed sequence C77080
mm10_v2_chr11_+_94044331_94044365	0.805621	T	ENSMUST00000024979.8|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr2_+_32609043_32609084	0.794611	T	ENSMUST00000128811.1|St6galnac6|ENSMUSG00000026811.12|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
mm10_v2_chr7_-_140881811_140881869	0.781389	T	ENSMUST00000106048.3|Sirt3|ENSMUSG00000025486.10|sirtuin 3 	ENSMUST00000147331.2|Sirt3|ENSMUSG00000025486.10|sirtuin 3 	ENSMUST00000137710.1|Sirt3|ENSMUSG00000025486.10|sirtuin 3
mm10_v2_chrX_-_162565514_162565617	0.776322	T	ENSMUST00000154424.1|Reps2|ENSMUSG00000040855.9|RALBP1 associated Eps domain containing protein 2
mm10_v2_chr2_-_103797617_103797662	0.768928	T	ENSMUST00000028607.6|Caprin1|ENSMUSG00000027184.8|cell cycle associated protein 1
mm10_v2_chr6_-_94700137_94700176	0.765351	T	ENSMUST00000101126.2|Lrig1|ENSMUSG00000030029.8|leucine-rich repeats and immunoglobulin-like domains 1 	ENSMUST00000032105.4|Lrig1|ENSMUSG00000030029.8|leucine-rich repeats and immunoglobulin-like domains 1
mm10_v2_chr4_+_155563700_155563908	0.765287	T	ENSMUST00000105613.3|Nadk|ENSMUSG00000029063.10|NAD kinase 	ENSMUST00000143840.1|Nadk|ENSMUSG00000029063.10|NAD kinase 	ENSMUST00000146080.1|Nadk|ENSMUSG00000029063.10|NAD kinase
mm10_v2_chr6_+_48647224_48647298	0.754422	T	ENSMUST00000078223.3|Gimap8|ENSMUSG00000064262.5|GTPase, IMAP family member 8
mm10_v2_chr3_-_121283096_121283103	0.750061	T	ENSMUST00000135818.1|Tmem56|ENSMUSG00000028132.9|transmembrane protein 56 	ENSMUST00000137234.1|Tmem56|ENSMUSG00000028132.9|transmembrane protein 56
mm10_v2_chr13_-_81633119_81633154	0.7474	T	ENSMUST00000126444.1|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98 	ENSMUST00000128585.1|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98 	ENSMUST00000146749.1|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98 	ENSMUST00000095585.4|Gpr98|ENSMUSG00000069170.7|G protein-coupled receptor 98
mm10_v2_chr11_+_94044241_94044273	0.742227	T	ENSMUST00000103168.3|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr2_-_80581234_80581266	0.740572	T	ENSMUST00000028386.5|Nckap1|ENSMUSG00000027002.7|NCK-associated protein 1
mm10_v2_chr7_-_142229971_142229971	0.73756	T	ENSMUST00000097942.2|Krtap5-5|ENSMUSG00000073785.2|keratin associated protein 5-5
mm10_v2_chr5_+_129895723_129895800	0.718143	T	ENSMUST00000041466.7|2410018M08Rik|ENSMUSG00000034173.7|RIKEN cDNA 2410018M08 gene 	ENSMUST00000077320.2|2410018M08Rik|ENSMUSG00000034173.7|RIKEN cDNA 2410018M08 gene
mm10_v2_chr2_+_155133501_155133559	0.711408	T	ENSMUST00000029126.8|Itch|ENSMUSG00000027598.10|itchy, E3 ubiquitin protein ligase 	ENSMUST00000109685.1|Itch|ENSMUSG00000027598.10|itchy, E3 ubiquitin protein ligase
mm10_v2_chr7_-_114117761_114117787	0.71122	T	ENSMUST00000069449.5|Rras2|ENSMUSG00000055723.5|related RAS viral (r-ras) oncogene homolog 2
mm10_v2_chrX_-_143933204_143933311	0.709687	T	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr11_+_94044194_94044238	0.702874	T	ENSMUST00000092777.4|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9 	ENSMUST00000075695.6|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr16_-_84835484_84835534	0.700643	T	ENSMUST00000114191.1|Atp5j|ENSMUSG00000022890.7|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
mm10_v2_chr4_+_145696161_145696161	0.694945	T	ENSMUST00000180014.1|Gm13242|ENSMUSG00000058186.7|predicted gene 13242
mm10_v2_chr7_-_74554726_74554791	0.689716	T	ENSMUST00000107453.1|Slco3a1|ENSMUSG00000025790.8|solute carrier organic anion transporter family, member 3a1
mm10_v2_chr2_-_80581380_80581479	0.678345	T	ENSMUST00000111760.2|Nckap1|ENSMUSG00000027002.7|NCK-associated protein 1
mm10_v2_chr15_+_89386827_89386827	0.661888	T	ENSMUST00000166926.2|Klhdc7b|ENSMUSG00000091680.2|kelch domain containing 7B
mm10_v2_chr14_+_54883377_54883507	0.649348	T	ENSMUST00000022806.3|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000134077.1|Gm20521|ENSMUSG00000092232.1|predicted gene 20521 	ENSMUST00000172844.1|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000133397.2|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2
mm10_v2_chr10_+_97693053_97693061	0.644176	T	ENSMUST00000060703.4|Ccer1|ENSMUSG00000047025.4|coiled coil glutamate rich protein 1
mm10_v2_chr8_+_72492915_72492951	0.61109	T	ENSMUST00000181452.1|Gm17435|ENSMUSG00000097000.1|predicted gene, 17435
mm10_v2_chr1_-_16619245_16619312	0.604875	T	ENSMUST00000182984.1|Ube2w|ENSMUSG00000025939.11|ubiquitin-conjugating enzyme E2W (putative) 	ENSMUST00000182554.1|Ube2w|ENSMUSG00000025939.11|ubiquitin-conjugating enzyme E2W (putative)
mm10_v2_chr7_-_79842287_79842352	0.604332	T	ENSMUST00000049004.6|Anpep|ENSMUSG00000039062.9|alanyl (membrane) aminopeptidase
mm10_v2_chr11_+_78536355_78536368	0.59997	T	ENSMUST00000128788.1|Ift20|ENSMUSG00000001105.9|intraflagellar transport 20
mm10_v2_chr4_+_116596672_116596730	0.591005	T	ENSMUST00000051869.7|Ccdc17|ENSMUSG00000034035.12|coiled-coil domain containing 17
mm10_v2_chr18_+_6765171_6765220	0.580377	T	ENSMUST00000097680.5|Rab18|ENSMUSG00000073639.5|RAB18, member RAS oncogene family
mm10_v2_chr7_-_89517576_89517587	0.577061	T	ENSMUST00000041761.5|Prss23|ENSMUSG00000039405.6|protease, serine, 23
mm10_v2_chr2_-_126151968_126152009	0.574494	T	ENSMUST00000110448.2|Fam227b|ENSMUSG00000027209.11|family with sequence similarity 227, member B 	ENSMUST00000110446.2|Fam227b|ENSMUSG00000027209.11|family with sequence similarity 227, member B
mm10_v2_chr11_+_78536393_78536492	0.57349	T	ENSMUST00000050366.8|Ift20|ENSMUSG00000001105.9|intraflagellar transport 20 	ENSMUST00000108275.1|Ift20|ENSMUSG00000001105.9|intraflagellar transport 20
mm10_v2_chr2_+_74681991_74682007	0.569923	T	ENSMUST00000142312.1|Hoxd11|ENSMUSG00000042499.12|homeobox D11
mm10_v2_chr18_-_12236301_12236405	0.561174	T	ENSMUST00000025279.5|Npc1|ENSMUSG00000024413.7|Niemann Pick type C1
mm10_v2_chr11_+_79660532_79660562	0.550054	T	ENSMUST00000155381.1|Rab11fip4|ENSMUSG00000017639.7|RAB11 family interacting protein 4 (class II)
mm10_v2_chr9_-_78396096_78396158	0.534983	T	ENSMUST00000171096.1|4930542C12Rik|ENSMUSG00000090724.1|RIKEN cDNA 4930542C12 gene
mm10_v2_chr8_-_105933832_105933862	0.52695	T	ENSMUST00000034368.6|Ctrl|ENSMUSG00000031896.6|chymotrypsin-like
mm10_v2_chr7_+_43444104_43444142	0.526026	T	ENSMUST00000004729.3|Etfb|ENSMUSG00000004610.3|electron transferring flavoprotein, beta polypeptide
mm10_v2_chr2_+_32450444_32450462	0.52272	T	ENSMUST00000048431.2|Naif1|ENSMUSG00000039164.2|nuclear apoptosis inducing factor 1
mm10_v2_chr7_-_120095177_120095312	0.522623	T	ENSMUST00000046993.3|Dnah3|ENSMUSG00000052273.2|dynein, axonemal, heavy chain 3
mm10_v2_chr1_-_74749221_74749221	0.519307	T	ENSMUST00000081636.6|Prkag3|ENSMUSG00000006542.7|protein kinase, AMP-activated, gamma 3 non-catatlytic subunit
mm10_v2_chr4_+_53440388_53440502	0.518848	T	ENSMUST00000102911.3|Slc44a1|ENSMUSG00000028412.11|solute carrier family 44, member 1 	ENSMUST00000107646.2|Slc44a1|ENSMUSG00000028412.11|solute carrier family 44, member 1
mm10_v2_chr6_-_142008745_142008745	0.487269	T	ENSMUST00000111832.1|Gm6614|ENSMUSG00000079263.2|predicted gene 6614
mm10_v2_chr7_+_140704165_140704165	0.485273	T	ENSMUST00000080681.3|Olfr541|ENSMUSG00000057997.3|olfactory receptor 541
mm10_v2_chr17_-_35895920_35896001	0.479894	T	ENSMUST00000059740.8|2310061I04Rik|ENSMUSG00000050705.9|RIKEN cDNA 2310061I04 gene
mm10_v2_chr12_+_84642896_84642896	0.468182	T	ENSMUST00000095551.4|Vrtn|ENSMUSG00000071235.5|vertebrae development associated
mm10_v2_chr7_+_14659496_14659496	0.467701	T	ENSMUST00000183788.1|Gm4745|ENSMUSG00000055942.7|predicted gene 4745
mm10_v2_chr7_+_96951552_96951597	0.464636	T	ENSMUST00000107159.1|Nars2|ENSMUSG00000018995.6|asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
mm10_v2_chr18_+_38296805_38296819	0.46216	T	ENSMUST00000171461.1|Rnf14|ENSMUSG00000060450.7|ring finger protein 14
mm10_v2_chr3_+_109080463_109080499	0.458022	T	ENSMUST00000029478.2|Slc25a54|ENSMUSG00000027880.3|solute carrier family 25, member 54 	ENSMUST00000159926.1|Slc25a54|ENSMUSG00000027880.3|solute carrier family 25, member 54
mm10_v2_chr18_+_38296635_38296719	0.455953	T	ENSMUST00000072376.5|Rnf14|ENSMUSG00000060450.7|ring finger protein 14 	ENSMUST00000170811.1|Rnf14|ENSMUSG00000060450.7|ring finger protein 14
mm10_v2_chr8_-_72492592_72492662	0.44586	T	ENSMUST00000152080.1|Slc35e1|ENSMUSG00000019731.7|solute carrier family 35, member E1
mm10_v2_chr15_+_88600280_88600332	0.436174	T	ENSMUST00000066949.7|Zdhhc25|ENSMUSG00000054117.7|zinc finger, DHHC domain containing 25
mm10_v2_chr7_+_14659733_14659745	0.434008	T	ENSMUST00000069740.7|Gm4745|ENSMUSG00000055942.7|predicted gene 4745 	ENSMUST00000183424.1|Gm4745|ENSMUSG00000055942.7|predicted gene 4745
mm10_v2_chrX_-_162829379_162829454	0.433026	T	ENSMUST00000041370.4|Txlng|ENSMUSG00000038344.8|taxilin gamma 	ENSMUST00000112316.2|Txlng|ENSMUSG00000038344.8|taxilin gamma 	ENSMUST00000112315.1|Txlng|ENSMUSG00000038344.8|taxilin gamma
mm10_v2_chr11_+_94044111_94044121	0.422041	T	ENSMUST00000132079.1|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr8_-_33843562_33843671	0.421845	T	ENSMUST00000183062.1|Rbpms|ENSMUSG00000031586.10|RNA binding protein gene with multiple splicing
mm10_v2_chr11_+_88047302_88047373	0.419123	T	ENSMUST00000139129.2|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr8_+_70131327_70131392	0.413515	T	ENSMUST00000095273.5|Nr2c2ap|ENSMUSG00000071078.5|nuclear receptor 2C2-associated protein
mm10_v2_chr7_-_108930151_108930164	0.411504	T	ENSMUST00000055745.3|Nlrp10|ENSMUSG00000049709.3|NLR family, pyrin domain containing 10
mm10_v2_chr10_+_128322443_128322476	0.406679	T	ENSMUST00000026446.2|Cnpy2|ENSMUSG00000025381.2|canopy 2 homolog (zebrafish)
mm10_v2_chr1_+_132316112_132316144	0.401247	T	ENSMUST00000082125.5|Nuak2|ENSMUSG00000009772.9|NUAK family, SNF1-like kinase, 2 	ENSMUST00000072177.7|Nuak2|ENSMUSG00000009772.9|NUAK family, SNF1-like kinase, 2
mm10_v2_chr14_+_53443243_53443262	0.399838	T	ENSMUST00000177622.2|Trav7-3|ENSMUSG00000096908.2|T cell receptor alpha variable 7-3
mm10_v2_chr11_+_60417238_60417301	0.390891	T	ENSMUST00000070681.6|Gid4|ENSMUSG00000018415.8|GID complex subunit 4, VID24 homolog (S. cerevisiae)
mm10_v2_chr7_-_15627876_15627876	0.383739	T	ENSMUST00000086122.3|Obox3|ENSMUSG00000066772.6|oocyte specific homeobox 3 	ENSMUST00000174443.1|Obox3|ENSMUSG00000066772.6|oocyte specific homeobox 3
mm10_v2_chr8_+_106935720_106935776	0.382213	T	ENSMUST00000047425.3|Sntb2|ENSMUSG00000041308.5|syntrophin, basic 2
mm10_v2_chr1_-_56971762_56971858	0.375388	T	ENSMUST00000114415.3|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr14_+_31019125_31019157	0.358591	T	ENSMUST00000112095.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000112098.3|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000112106.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000146325.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1
mm10_v2_chr8_+_113643206_113643231	0.358378	T	ENSMUST00000034219.4|Syce1l|ENSMUSG00000033409.7|synaptonemal complex central element protein 1 like 	ENSMUST00000095173.1|Syce1l|ENSMUSG00000033409.7|synaptonemal complex central element protein 1 like
mm10_v2_chr16_-_10796815_10796886	0.322618	T	ENSMUST00000023144.5|Prm1|ENSMUSG00000022501.5|protamine 1
mm10_v2_chr7_+_15750377_15750381	0.321873	T	ENSMUST00000098802.3|Obox5|ENSMUSG00000074366.3|oocyte specific homeobox 5 	ENSMUST00000173053.1|Obox5|ENSMUSG00000074366.3|oocyte specific homeobox 5
mm10_v2_chr1_-_156032948_156032978	0.30026	T	ENSMUST00000136397.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr10_+_99420522_99420522	0.27134	T	ENSMUST00000060657.2|B530045E10Rik|ENSMUSG00000044633.2|RIKEN cDNA B530045E10 gene
mm10_v2_chr2_+_74697663_74697680	0.271026	T	ENSMUST00000059272.8|Hoxd9|ENSMUSG00000043342.8|homeobox D9
mm10_v2_chr9_-_31464238_31464252	0.265436	T	ENSMUST00000048050.7|Tmem45b|ENSMUSG00000041737.7|transmembrane protein 45b
mm10_v2_chr7_-_30635852_30635852	0.258202	T	ENSMUST00000108147.2|Etv2|ENSMUSG00000006311.8|ets variant gene 2
mm10_v2_chr17_+_46496753_46496809	0.257876	T	ENSMUST00000046497.6|Dnph1|ENSMUSG00000040658.6|2'-deoxynucleoside 5'-phosphate N-hydrolase 1
mm10_v2_chr16_-_44333135_44333196	0.257308	T	ENSMUST00000047446.6|Sidt1|ENSMUSG00000022696.11|SID1 transmembrane family, member 1
mm10_v2_chr16_-_44332925_44333004	0.251265	T	ENSMUST00000136381.1|Sidt1|ENSMUSG00000022696.11|SID1 transmembrane family, member 1
mm10_v2_chr14_-_100149764_100149764	0.250608	T	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr7_-_79793788_79793788	0.249259	T	ENSMUST00000032760.5|Mesp1|ENSMUSG00000030544.5|mesoderm posterior 1
mm10_v2_chr6_-_140041409_140041466	0.240477	T	ENSMUST00000032356.6|Plcz1|ENSMUSG00000030230.9|phospholipase C, zeta 1
mm10_v2_chr3_+_152346465_152346531	0.240471	T	ENSMUST00000026507.6|Usp33|ENSMUSG00000025437.9|ubiquitin specific peptidase 33 	ENSMUST00000117492.2|Usp33|ENSMUSG00000025437.9|ubiquitin specific peptidase 33
mm10_v2_chr12_-_111966954_111967017	0.232428	T	ENSMUST00000021719.5|2010107E04Rik|ENSMUSG00000021290.5|RIKEN cDNA 2010107E04 gene
mm10_v2_chr11_-_98193260_98193298	0.231926	T	ENSMUST00000092735.5|Med1|ENSMUSG00000018160.9|mediator complex subunit 1 	ENSMUST00000107545.2|Med1|ENSMUSG00000018160.9|mediator complex subunit 1
mm10_v2_chr1_-_156421146_156421159	0.229606	T	ENSMUST00000178036.1|Axdnd1|ENSMUSG00000026601.7|axonemal dynein light chain domain containing 1
mm10_v2_chr10_+_21978643_21978689	0.224141	T	ENSMUST00000142174.1|Sgk1|ENSMUSG00000019970.9|serum/glucocorticoid regulated kinase 1 	ENSMUST00000164659.1|Sgk1|ENSMUSG00000019970.9|serum/glucocorticoid regulated kinase 1
mm10_v2_chr4_-_101893789_101893789	0.219486	T	ENSMUST00000051043.3|C130073F10Rik|ENSMUSG00000046133.3|RIKEN cDNA C130073F10 gene
mm10_v2_chr16_-_44746337_44746368	0.210497	T	ENSMUST00000023348.4|Gtpbp8|ENSMUSG00000022668.4|GTP-binding protein 8 (putative) 	ENSMUST00000162512.1|Gtpbp8|ENSMUSG00000022668.4|GTP-binding protein 8 (putative)
mm10_v2_chr4_-_3574844_3574853	0.208599	T	ENSMUST00000029891.5|Tmem68|ENSMUSG00000028232.7|transmembrane protein 68
mm10_v2_chr9_+_13765970_13766043	0.207678	T	ENSMUST00000152532.1|Mtmr2|ENSMUSG00000031918.10|myotubularin related protein 2
mm10_v2_chr16_+_84835070_84835124	0.207219	T	ENSMUST00000009120.7|Gabpa|ENSMUSG00000008976.10|GA repeat binding protein, alpha
mm10_v2_chr1_-_16619437_16619489	0.202625	T	ENSMUST00000117146.1|Ube2w|ENSMUSG00000025939.11|ubiquitin-conjugating enzyme E2W (putative)
mm10_v2_chr6_-_24956106_24956131	0.199565	T	ENSMUST00000127247.2|Tmem229a|ENSMUSG00000048022.10|transmembrane protein 229A
mm10_v2_chrY_+_897782_897800	0.198694	T	ENSMUST00000055032.7|Kdm5d|ENSMUSG00000056673.8|lysine (K)-specific demethylase 5D
mm10_v2_chr5_+_22775630_22775630	0.194091	T	ENSMUST00000179257.1|Gm21846|ENSMUSG00000094832.1|predicted gene, 21846
mm10_v2_chr14_+_3892557_3892557	0.190346	T	ENSMUST00000178392.1|Gm2916|ENSMUSG00000096218.2|predicted gene 2916
mm10_v2_chr2_+_126152141_126152212	0.187871	T	ENSMUST00000170908.1|Dtwd1|ENSMUSG00000023330.6|DTW domain containing 1
mm10_v2_chr10_-_103236280_103236327	0.186636	T	ENSMUST00000123364.1|Lrriq1|ENSMUSG00000019892.6|leucine-rich repeats and IQ motif containing 1 	ENSMUST00000166240.1|Lrriq1|ENSMUSG00000019892.6|leucine-rich repeats and IQ motif containing 1 	ENSMUST00000020043.5|Lrriq1|ENSMUSG00000019892.6|leucine-rich repeats and IQ motif containing 1
mm10_v2_chr11_+_105178765_105178807	0.182007	T	ENSMUST00000106939.2|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis)
mm10_v2_chr9_-_110989611_110989728	0.180034	T	ENSMUST00000084922.5|Rtp3|ENSMUSG00000066319.5|receptor transporter protein 3
mm10_v2_chr12_+_84316830_84316865	0.17228	T	ENSMUST00000045931.10|Zfp410|ENSMUSG00000042472.10|zinc finger protein 410
mm10_v2_chr11_-_86544754_86544805	0.171162	T	ENSMUST00000138810.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000058286.2|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000154617.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1
mm10_v2_chr11_+_88047788_88047832	0.161042	T	ENSMUST00000107920.3|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr7_-_107757993_107758032	0.159608	T	ENSMUST00000052438.7|Cyb5r2|ENSMUSG00000048065.7|cytochrome b5 reductase 2
mm10_v2_chr14_+_41570696_41570696	0.159001	T	ENSMUST00000100701.4|1700049E17Rik2|ENSMUSG00000072613.6|tandem duplication of RIKEN cDNA 1700049E17 gene, gene 2
mm10_v2_chr11_-_65159890_65159891	0.14975	T	ENSMUST00000020855.3|1700086D15Rik|ENSMUSG00000020548.4|RIKEN cDNA 1700086D15 gene 	ENSMUST00000108696.1|1700086D15Rik|ENSMUSG00000020548.4|RIKEN cDNA 1700086D15 gene
mm10_v2_chr1_-_44218952_44218961	0.149407	T	ENSMUST00000054801.3|Mettl21e|ENSMUSG00000046828.3|methyltransferase like 21E
mm10_v2_chr11_-_78536235_78536332	0.145447	T	ENSMUST00000017759.2|Tnfaip1|ENSMUSG00000017615.6|tumor necrosis factor, alpha-induced protein 1 (endothelial) 	ENSMUST00000108277.2|Tnfaip1|ENSMUSG00000017615.6|tumor necrosis factor, alpha-induced protein 1 (endothelial)
mm10_v2_chr13_-_38037069_38037158	0.135936	T	ENSMUST00000089840.4|Cage1|ENSMUSG00000044566.9|cancer antigen 1
mm10_v2_chr14_-_41069074_41069212	0.134788	T	ENSMUST00000022316.4|Dydc2|ENSMUSG00000021791.6|DPY30 domain containing 2
mm10_v2_chr15_-_100403243_100403270	0.134401	T	ENSMUST00000124324.1|Slc11a2|ENSMUSG00000023030.10|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2
mm10_v2_chr8_-_15046047_15046091	0.125873	T	ENSMUST00000050493.3|BB014433|ENSMUSG00000049008.4|expressed sequence BB014433 	ENSMUST00000123331.1|BB014433|ENSMUSG00000049008.4|expressed sequence BB014433
mm10_v2_chr11_-_60417022_60417056	0.124368	T	ENSMUST00000108721.1|Atpaf2|ENSMUSG00000042709.8|ATP synthase mitochondrial F1 complex assembly factor 2
mm10_v2_chr5_-_142906702_142906754	0.121597	T	ENSMUST00000167721.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000163829.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000100497.4|Actb|ENSMUSG00000029580.8|actin, beta
mm10_v2_chr4_+_155624853_155624929	0.11807	T	ENSMUST00000067081.3|Cdk11b|ENSMUSG00000029062.8|cyclin-dependent kinase 11B 	ENSMUST00000105600.1|Cdk11b|ENSMUSG00000029062.8|cyclin-dependent kinase 11B 	ENSMUST00000105598.1|Cdk11b|ENSMUSG00000029062.8|cyclin-dependent kinase 11B
mm10_v2_chr7_+_15750134_15750134	0.114903	T	ENSMUST00000173455.1|Obox5|ENSMUSG00000074366.3|oocyte specific homeobox 5
mm10_v2_chr2_-_30178422_30178473	0.104946	T	ENSMUST00000100220.4|D2Wsu81e|ENSMUSG00000039660.10|DNA segment, Chr 2, Wayne State University 81, expressed 	ENSMUST00000179795.1|D2Wsu81e|ENSMUSG00000039660.10|DNA segment, Chr 2, Wayne State University 81, expressed
mm10_v2_chr14_-_21740395_21740420	0.102597	T	ENSMUST00000120984.2|Dusp13|ENSMUSG00000021768.9|dual specificity phosphatase 13
mm10_v2_chr1_+_97770158_97770209	0.0853244	T	ENSMUST00000112844.3|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000112842.1|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1 	ENSMUST00000027571.6|Gin1|ENSMUSG00000026333.8|gypsy retrotransposon integrase 1
mm10_v2_chr14_+_31019159_31019178	0.0779834	T	ENSMUST00000112094.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000144009.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1
mm10_v2_chr6_+_52714219_52714440	0.0764326	T	ENSMUST00000138040.1|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1 	ENSMUST00000129660.1|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1
mm10_v2_chr19_+_23758819_23758907	0.0613866	T	ENSMUST00000025830.7|Apba1|ENSMUSG00000024897.8|amyloid beta (A4) precursor protein binding, family  A, member 1
mm10_v2_chr18_-_36726730_36726745	0.0521633	T	ENSMUST00000061829.6|Cd14|ENSMUSG00000051439.6|CD14 antigen
mm10_v2_chr1_-_71414881_71414915	0.0426324	T	ENSMUST00000087268.5|Abca12|ENSMUSG00000050296.8|ATP-binding cassette, sub-family A (ABC1), member 12
mm10_v2_chr11_-_65269984_65270002	0.0408504	T	ENSMUST00000108695.2|Myocd|ENSMUSG00000020542.12|myocardin
mm10_v2_chr10_-_116896879_116896956	0.0356935	T	ENSMUST00000048229.7|Myrfl|ENSMUSG00000034057.7|myelin regulatory factor-like
mm10_v2_chr6_-_116716888_116716923	0.0259154	T	ENSMUST00000056623.6|Tmem72|ENSMUSG00000048108.7|transmembrane protein 72
mm10_v2_chr4_-_41731142_41731263	0.0236855	T	ENSMUST00000171251.1|Arid3c|ENSMUSG00000066224.7|AT rich interactive domain 3C (BRIGHT-like) 	ENSMUST00000159930.1|Arid3c|ENSMUSG00000066224.7|AT rich interactive domain 3C (BRIGHT-like)
mm10_v2_chr15_-_59374149_59374199	0.0226591	T	ENSMUST00000022976.4|E430025E21Rik|ENSMUSG00000022350.6|RIKEN cDNA E430025E21 gene
mm10_v2_chr4_-_133277730_133277804	0.0211029	T	ENSMUST00000105907.2|Tmem222|ENSMUSG00000028857.10|transmembrane protein 222
mm10_v2_chr5_+_73406076_73406268	0.00734925	T	ENSMUST00000031040.6|Cwh43|ENSMUSG00000029154.7|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae) 	ENSMUST00000065543.6|Cwh43|ENSMUSG00000029154.7|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)
mm10_v2_chrX_-_111536325_111536342	0.00357474	T	ENSMUST00000156639.1|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6
mm10_v2_chr11_-_69666062_69666153	0.00162598	T	ENSMUST00000108654.2|Cd68|ENSMUSG00000018774.7|CD68 antigen 	ENSMUST00000018918.5|Cd68|ENSMUSG00000018774.7|CD68 antigen
