mm10_v2_chr9_-_103480328_103480348	2.28569	Sox6_Sox9	ENSMUST00000124310.2|Bfsp2|ENSMUSG00000032556.9|beaded filament structural protein 2, phakinin
mm10_v2_chr11_-_99438143_99438159	2.23973	Sox6_Sox9	ENSMUST00000017743.2|Krt20|ENSMUSG00000035775.2|keratin 20
mm10_v2_chr7_-_142666816_142666842	2.06765	Sox6_Sox9	ENSMUST00000105935.1|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr6_+_86628174_86628208	2.0546	Sox6_Sox9	ENSMUST00000043400.6|Asprv1|ENSMUSG00000033508.6|aspartic peptidase, retroviral-like 1
mm10_v2_chr8_+_123411424_123411562	1.96454	Sox6_Sox9	ENSMUST00000071134.3|Tubb3|ENSMUSG00000062380.3|tubulin, beta 3 class III
mm10_v2_chr7_+_45216671_45216695	1.84818	Sox6_Sox9	ENSMUST00000134420.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2
mm10_v2_chrX_+_73639414_73639436	1.79225	Sox6_Sox9	ENSMUST00000019701.8|Dusp9|ENSMUSG00000031383.8|dual specificity phosphatase 9
mm10_v2_chr12_+_24831583_24831658	1.60413	Sox6_Sox9	ENSMUST00000110942.3|Mboat2|ENSMUSG00000020646.10|membrane bound O-acyltransferase domain containing 2 	ENSMUST00000078902.6|Mboat2|ENSMUSG00000020646.10|membrane bound O-acyltransferase domain containing 2
mm10_v2_chr17_-_79355082_79355103	1.38655	Sox6_Sox9	ENSMUST00000068958.7|Cdc42ep3|ENSMUSG00000036533.8|CDC42 effector protein (Rho GTPase binding) 3
mm10_v2_chr6_+_86404336_86404473	1.37696	Sox6_Sox9	ENSMUST00000113713.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000113708.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr5_-_131538687_131538717	1.36212	Sox6_Sox9	ENSMUST00000161374.1|Auts2|ENSMUSG00000029673.11|autism susceptibility candidate 2
mm10_v2_chr6_+_86404257_86404319	1.35291	Sox6_Sox9	ENSMUST00000095752.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000130967.1|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr10_-_30655859_30655868	1.33486	Sox6_Sox9	ENSMUST00000092610.4|Ncoa7|ENSMUSG00000039697.9|nuclear receptor coactivator 7
mm10_v2_chr7_-_100514800_100514960	1.32608	Sox6_Sox9	ENSMUST00000054923.7|Dnajb13|ENSMUSG00000030708.7|DnaJ (Hsp40) related, subfamily B, member 13
mm10_v2_chr8_-_85365317_85365334	1.30875	Sox6_Sox9	ENSMUST00000034133.7|Mylk3|ENSMUSG00000031698.8|myosin light chain kinase 3
mm10_v2_chr6_+_86404219_86404240	1.30851	Sox6_Sox9	ENSMUST00000095754.3|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1 	ENSMUST00000095753.2|Tia1|ENSMUSG00000071337.5|cytotoxic granule-associated RNA binding protein 1
mm10_v2_chr4_+_115057410_115057438	1.28283	Sox6_Sox9	ENSMUST00000136946.1|Tal1|ENSMUSG00000028717.6|T cell acute lymphocytic leukemia 1
mm10_v2_chr8_-_85365341_85365353	1.21521	Sox6_Sox9	ENSMUST00000121972.1|Mylk3|ENSMUSG00000031698.8|myosin light chain kinase 3
mm10_v2_chr2_-_170406501_170406518	1.15924	Sox6_Sox9	ENSMUST00000154650.1|Bcas1|ENSMUSG00000013523.7|breast carcinoma amplified sequence 1
mm10_v2_chr7_+_100493795_100493848	1.09015	Sox6_Sox9	ENSMUST00000129324.1|Ucp2|ENSMUSG00000033685.6|uncoupling protein 2 (mitochondrial, proton carrier)
mm10_v2_chr11_+_44617310_44617336	1.08931	Sox6_Sox9	ENSMUST00000081265.5|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000101326.3|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000109268.1|Ebf1|ENSMUSG00000057098.8|early B cell factor 1
mm10_v2_chr10_+_17796256_17796339	0.970662	Sox6_Sox9	ENSMUST00000037964.6|Txlnb|ENSMUSG00000039891.6|taxilin beta
mm10_v2_chr18_+_82554463_82554583	0.945666	Sox6_Sox9	ENSMUST00000062446.7|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000102812.4|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000075372.5|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000080658.4|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000152071.1|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000114674.3|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000142850.1|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000133193.1|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000123251.1|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000153478.1|Mbp|ENSMUSG00000041607.10|myelin basic protein 	ENSMUST00000132369.1|Mbp|ENSMUSG00000041607.10|myelin basic protein
mm10_v2_chr6_-_112388013_112388037	0.893681	Sox6_Sox9	ENSMUST00000060847.5|Ssu2|ENSMUSG00000034387.6|ssu-2 homolog (C. elegans)
mm10_v2_chr4_+_115057683_115057811	0.882998	Sox6_Sox9	ENSMUST00000161601.1|Tal1|ENSMUSG00000028717.6|T cell acute lymphocytic leukemia 1
mm10_v2_chr11_-_11970540_11970642	0.873056	Sox6_Sox9	ENSMUST00000109653.1|Grb10|ENSMUSG00000020176.11|growth factor receptor bound protein 10
mm10_v2_chr3_-_92588982_92589017	0.845392	Sox6_Sox9	ENSMUST00000098888.5|Smcp|ENSMUSG00000074435.5|sperm mitochondria-associated cysteine-rich protein
mm10_v2_chrX_+_93654863_93654981	0.821914	Sox6_Sox9	ENSMUST00000113933.2|Pcyt1b|ENSMUSG00000035246.10|phosphate cytidylyltransferase 1, choline, beta isoform
mm10_v2_chr17_-_35066170_35066189	0.817878	Sox6_Sox9	ENSMUST00000174190.1|AU023871|ENSMUSG00000073414.2|expressed sequence AU023871 	ENSMUST00000097337.1|AU023871|ENSMUSG00000073414.2|expressed sequence AU023871
mm10_v2_chr10_-_62792243_62792368	0.803244	Sox6_Sox9	ENSMUST00000020268.5|Ccar1|ENSMUSG00000020074.6|cell division cycle and apoptosis regulator 1
mm10_v2_chr2_+_120476911_120476976	0.786354	Sox6_Sox9	ENSMUST00000110716.1|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000028748.6|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000090028.5|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000110719.2|Capn3|ENSMUSG00000079110.5|calpain 3
mm10_v2_chr6_-_136781718_136781806	0.762367	Sox6_Sox9	ENSMUST00000078095.6|Gucy2c|ENSMUSG00000042638.8|guanylate cyclase 2c 	ENSMUST00000032338.7|Gucy2c|ENSMUSG00000042638.8|guanylate cyclase 2c
mm10_v2_chr18_+_11633276_11633357	0.76124	Sox6_Sox9	ENSMUST00000115861.2|Rbbp8|ENSMUSG00000041238.9|retinoblastoma binding protein 8
mm10_v2_chr3_-_116129615_116129688	0.760402	Sox6_Sox9	ENSMUST00000029574.8|Vcam1|ENSMUSG00000027962.10|vascular cell adhesion molecule 1
mm10_v2_chr6_-_12749193_12749253	0.75702	Sox6_Sox9	ENSMUST00000046121.6|Thsd7a|ENSMUSG00000032625.8|thrombospondin, type I, domain containing 7A 	ENSMUST00000172356.1|Thsd7a|ENSMUSG00000032625.8|thrombospondin, type I, domain containing 7A
mm10_v2_chr10_+_69534039_69534070	0.757007	Sox6_Sox9	ENSMUST00000182557.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr7_-_132813095_132813162	0.75054	Sox6_Sox9	ENSMUST00000106165.1|Fam53b|ENSMUSG00000030956.9|family with sequence similarity 53, member B
mm10_v2_chr8_-_85380964_85380984	0.743985	Sox6_Sox9	ENSMUST00000122452.1|Mylk3|ENSMUSG00000031698.8|myosin light chain kinase 3
mm10_v2_chr13_-_97747399_97747414	0.730406	Sox6_Sox9	ENSMUST00000144993.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr6_+_122513643_122513668	0.7244	Sox6_Sox9	ENSMUST00000118626.1|Mfap5|ENSMUSG00000030116.8|microfibrillar associated protein 5
mm10_v2_chr6_-_122340499_122340510	0.718224	Sox6_Sox9	ENSMUST00000160843.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr15_-_95528702_95528777	0.713618	Sox6_Sox9	ENSMUST00000166170.1|Nell2|ENSMUSG00000022454.10|NEL-like 2
mm10_v2_chr3_+_67374091_67374102	0.70896	Sox6_Sox9	ENSMUST00000077916.5|Mlf1|ENSMUSG00000048416.9|myeloid leukemia factor 1
mm10_v2_chr3_+_131110350_131110471	0.705772	Sox6_Sox9	ENSMUST00000066849.6|Lef1|ENSMUSG00000027985.8|lymphoid enhancer binding factor 1 	ENSMUST00000106341.2|Lef1|ENSMUSG00000027985.8|lymphoid enhancer binding factor 1 	ENSMUST00000029611.7|Lef1|ENSMUSG00000027985.8|lymphoid enhancer binding factor 1
mm10_v2_chrX_+_157702574_157702598	0.696375	Sox6_Sox9	ENSMUST00000112520.1|Smpx|ENSMUSG00000041476.6|small muscle protein, X-linked
mm10_v2_chr18_-_15063560_15063617	0.67191	Sox6_Sox9	ENSMUST00000168989.1|Kctd1|ENSMUSG00000036225.8|potassium channel tetramerisation domain containing 1
mm10_v2_chr13_-_97747373_97747384	0.670657	Sox6_Sox9	ENSMUST00000123535.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr6_+_122513676_122513688	0.667757	Sox6_Sox9	ENSMUST00000142896.1|Mfap5|ENSMUSG00000030116.8|microfibrillar associated protein 5 	ENSMUST00000121656.1|Mfap5|ENSMUSG00000030116.8|microfibrillar associated protein 5
mm10_v2_chr7_+_100494044_100494088	0.665457	Sox6_Sox9	ENSMUST00000153287.1|Ucp2|ENSMUSG00000033685.6|uncoupling protein 2 (mitochondrial, proton carrier)
mm10_v2_chr2_-_84822546_84822652	0.638749	Sox6_Sox9	ENSMUST00000028471.5|Smtnl1|ENSMUSG00000027077.7|smoothelin-like 1
mm10_v2_chr3_+_67374116_67374154	0.628439	Sox6_Sox9	ENSMUST00000061322.8|Mlf1|ENSMUSG00000048416.9|myeloid leukemia factor 1
mm10_v2_chr6_-_52183828_52183855	0.61852	Sox6_Sox9	ENSMUST00000134831.1|Hoxa3|ENSMUSG00000079560.7|homeobox A3
mm10_v2_chr2_+_180598219_180598226	0.616318	Sox6_Sox9	ENSMUST00000103059.1|Col9a3|ENSMUSG00000027570.9|collagen, type IX, alpha 3
mm10_v2_chr3_-_123034943_123034995	0.614934	Sox6_Sox9	ENSMUST00000029761.7|Myoz2|ENSMUSG00000028116.7|myozenin 2
mm10_v2_chr14_-_56262233_56262260	0.606808	Sox6_Sox9	ENSMUST00000015581.4|Gzmb|ENSMUSG00000015437.4|granzyme B
mm10_v2_chr7_+_75455534_75455629	0.60096	Sox6_Sox9	ENSMUST00000147005.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13 	ENSMUST00000166315.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr11_+_11686213_11686282	0.59081	Sox6_Sox9	ENSMUST00000076700.4|Ikzf1|ENSMUSG00000018654.11|IKAROS family zinc finger 1 	ENSMUST00000048122.6|Ikzf1|ENSMUSG00000018654.11|IKAROS family zinc finger 1
mm10_v2_chr19_+_34217588_34217624	0.590338	Sox6_Sox9	ENSMUST00000119603.1|Stambpl1|ENSMUSG00000024776.11|STAM binding protein like 1
mm10_v2_chr9_-_72111172_72111225	0.586504	Sox6_Sox9	ENSMUST00000183992.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr2_+_31245801_31245900	0.579815	Sox6_Sox9	ENSMUST00000000199.7|Ncs1|ENSMUSG00000062661.6|neuronal calcium sensor 1
mm10_v2_chr1_+_40515362_40515431	0.579146	Sox6_Sox9	ENSMUST00000027237.5|Il18rap|ENSMUSG00000026068.5|interleukin 18 receptor accessory protein
mm10_v2_chr2_-_101883010_101883023	0.576451	Sox6_Sox9	ENSMUST00000154525.1|Prr5l|ENSMUSG00000032841.9|proline rich 5 like
mm10_v2_chr4_+_48585276_48585365	0.570879	Sox6_Sox9	ENSMUST00000123476.1|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr9_+_122923050_122923099	0.570055	Sox6_Sox9	ENSMUST00000051667.7|Zfp105|ENSMUSG00000057895.5|zinc finger protein 105 	ENSMUST00000148851.1|Zfp105|ENSMUSG00000057895.5|zinc finger protein 105
mm10_v2_chr11_-_114795888_114795903	0.556692	Sox6_Sox9	ENSMUST00000000206.3|Btbd17|ENSMUSG00000000202.3|BTB (POZ) domain containing 17
mm10_v2_chr8_-_4259257_4259283	0.553908	Sox6_Sox9	ENSMUST00000053252.7|Ctxn1|ENSMUSG00000048644.7|cortexin 1
mm10_v2_chr11_+_11685909_11685947	0.553615	Sox6_Sox9	ENSMUST00000065433.5|Ikzf1|ENSMUSG00000018654.11|IKAROS family zinc finger 1
mm10_v2_chr12_+_24708984_24709029	0.551163	Sox6_Sox9	ENSMUST00000154588.1|Rrm2|ENSMUSG00000020649.5|ribonucleotide reductase M2
mm10_v2_chr15_-_26895049_26895049	0.519562	Sox6_Sox9	ENSMUST00000059204.9|Fbxl7|ENSMUSG00000043556.9|F-box and leucine-rich repeat protein 7
mm10_v2_chr16_+_94370618_94370784	0.508043	Sox6_Sox9	ENSMUST00000117648.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000147352.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150346.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000155692.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000153988.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000141856.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000152117.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150097.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000122895.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000151770.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3
mm10_v2_chr12_-_81781121_81781176	0.50554	Sox6_Sox9	ENSMUST00000035987.7|Map3k9|ENSMUSG00000042724.7|mitogen-activated protein kinase kinase kinase 9
mm10_v2_chr6_-_122340525_122340561	0.503482	Sox6_Sox9	ENSMUST00000112600.2|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr2_+_156420837_156420909	0.498277	Sox6_Sox9	ENSMUST00000103137.3|Epb4.1l1|ENSMUSG00000027624.11|erythrocyte protein band 4.1-like 1
mm10_v2_chr16_+_17070220_17070239	0.483826	Sox6_Sox9	ENSMUST00000141959.1|Ypel1|ENSMUSG00000022773.10|yippee-like 1 (Drosophila)
mm10_v2_chr8_+_22808275_22808275	0.482835	Sox6_Sox9	ENSMUST00000068068.4|1700041G16Rik|ENSMUSG00000054822.4|RIKEN cDNA 1700041G16 gene
mm10_v2_chr2_+_4400958_4400975	0.482387	Sox6_Sox9	ENSMUST00000075767.7|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr3_-_75270073_75270085	0.480564	Sox6_Sox9	ENSMUST00000039047.4|Serpini2|ENSMUSG00000034139.4|serine (or cysteine) peptidase inhibitor, clade I, member 2
mm10_v2_chr1_-_97761538_97761609	0.47873	Sox6_Sox9	ENSMUST00000171129.1|Ppip5k2|ENSMUSG00000040648.8|diphosphoinositol pentakisphosphate kinase 2
mm10_v2_chr6_+_122513583_122513641	0.476914	Sox6_Sox9	ENSMUST00000032210.7|Mfap5|ENSMUSG00000030116.8|microfibrillar associated protein 5 	ENSMUST00000148517.1|Mfap5|ENSMUSG00000030116.8|microfibrillar associated protein 5
mm10_v2_chr11_+_3983636_3983695	0.473391	Sox6_Sox9	ENSMUST00000078757.1|Gal3st1|ENSMUSG00000049721.8|galactose-3-O-sulfotransferase 1
mm10_v2_chr15_-_95528228_95528266	0.460012	Sox6_Sox9	ENSMUST00000075275.2|Nell2|ENSMUSG00000022454.10|NEL-like 2
mm10_v2_chr17_-_48409729_48409906	0.451698	Sox6_Sox9	ENSMUST00000160319.1|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha 	ENSMUST00000159535.1|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha 	ENSMUST00000078800.6|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha 	ENSMUST00000046719.7|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha 	ENSMUST00000162460.1|Nfya|ENSMUSG00000023994.7|nuclear transcription factor-Y alpha
mm10_v2_chr6_-_122340200_122340244	0.442508	Sox6_Sox9	ENSMUST00000159384.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr1_+_135729147_135729234	0.429804	Sox6_Sox9	ENSMUST00000027677.7|Csrp1|ENSMUSG00000026421.8|cysteine and glycine-rich protein 1
mm10_v2_chr7_-_132813528_132813667	0.427928	Sox6_Sox9	ENSMUST00000097999.2|Fam53b|ENSMUSG00000030956.9|family with sequence similarity 53, member B
mm10_v2_chr12_+_108605757_108605814	0.42385	Sox6_Sox9	ENSMUST00000109854.2|Evl|ENSMUSG00000021262.8|Ena-vasodilator stimulated phosphoprotein
mm10_v2_chr17_-_68004075_68004140	0.413966	Sox6_Sox9	ENSMUST00000024840.5|Arhgap28|ENSMUSG00000024043.7|Rho GTPase activating protein 28
mm10_v2_chr16_+_17146937_17146985	0.410553	Sox6_Sox9	ENSMUST00000115706.1|Ydjc|ENSMUSG00000041774.8|YdjC homolog (bacterial) 	ENSMUST00000069064.4|Ydjc|ENSMUSG00000041774.8|YdjC homolog (bacterial)
mm10_v2_chr13_+_21945084_21945140	0.410192	Sox6_Sox9	ENSMUST00000176511.1|Zfp184|ENSMUSG00000006720.10|zinc finger protein 184 (Kruppel-like) 	ENSMUST00000102978.1|Zfp184|ENSMUSG00000006720.10|zinc finger protein 184 (Kruppel-like) 	ENSMUST00000152258.2|Zfp184|ENSMUSG00000006720.10|zinc finger protein 184 (Kruppel-like)
mm10_v2_chr12_+_31265279_31265322	0.407449	Sox6_Sox9	ENSMUST00000002979.8|Lamb1|ENSMUSG00000002900.9|laminin B1 	ENSMUST00000170495.1|Lamb1|ENSMUSG00000002900.9|laminin B1
mm10_v2_chr2_+_32741452_32741499	0.407235	Sox6_Sox9	ENSMUST00000131101.1|Sh2d3c|ENSMUSG00000059013.6|SH2 domain containing 3C
mm10_v2_chr2_+_28700155_28700187	0.404765	Sox6_Sox9	ENSMUST00000074156.6|Ak8|ENSMUSG00000026807.8|adenylate kinase 8
mm10_v2_chr5_+_3928033_3928178	0.400992	Sox6_Sox9	ENSMUST00000143365.1|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chr10_+_37139558_37139558	0.396018	Sox6_Sox9	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr13_-_4150628_4150654	0.394638	Sox6_Sox9	ENSMUST00000110704.2|Akr1c18|ENSMUSG00000021214.7|aldo-keto reductase family 1, member C18 	ENSMUST00000021635.7|Akr1c18|ENSMUSG00000021214.7|aldo-keto reductase family 1, member C18
mm10_v2_chr1_-_119837338_119837386	0.393799	Sox6_Sox9	ENSMUST00000163435.1|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr12_+_31265234_31265267	0.392568	Sox6_Sox9	ENSMUST00000169088.1|Lamb1|ENSMUSG00000002900.9|laminin B1
mm10_v2_chr4_+_13743424_13743478	0.387531	Sox6_Sox9	ENSMUST00000006761.3|Runx1t1|ENSMUSG00000006586.9|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm10_v2_chr11_-_74590065_74590158	0.385268	Sox6_Sox9	ENSMUST00000145524.1|Rap1gap2|ENSMUSG00000038807.11|RAP1 GTPase activating protein 2 	ENSMUST00000047488.7|Rap1gap2|ENSMUSG00000038807.11|RAP1 GTPase activating protein 2
mm10_v2_chr9_-_60511003_60511035	0.383546	Sox6_Sox9	ENSMUST00000098660.3|Thsd4|ENSMUSG00000032289.9|thrombospondin, type I, domain containing 4
mm10_v2_chr9_-_88522876_88522929	0.3824	Sox6_Sox9	ENSMUST00000180563.2|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5 	ENSMUST00000183030.1|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5 	ENSMUST00000182232.1|Snhg5|ENSMUSG00000097195.2|small nucleolar RNA host gene 5
mm10_v2_chr17_-_35000848_35000958	0.381055	Sox6_Sox9	ENSMUST00000166828.3|D17H6S56E-5|ENSMUSG00000091747.3|DNA segment, Chr 17, human D6S56E 5
mm10_v2_chr5_+_66968416_66968447	0.380277	Sox6_Sox9	ENSMUST00000038188.7|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr16_+_94370786_94370823	0.378946	Sox6_Sox9	ENSMUST00000147046.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000149885.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000127667.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000119131.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000145883.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3
mm10_v2_chr10_-_116473875_116473929	0.376413	Sox6_Sox9	ENSMUST00000068233.4|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm10_v2_chr11_+_3330781_3330812	0.374863	Sox6_Sox9	ENSMUST00000136536.1|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1 	ENSMUST00000093399.4|Pik3ip1|ENSMUSG00000034614.8|phosphoinositide-3-kinase interacting protein 1
mm10_v2_chr4_-_63403330_63403354	0.373892	Sox6_Sox9	ENSMUST00000035724.4|Akna|ENSMUSG00000039158.11|AT-hook transcription factor
mm10_v2_chr13_+_75967704_75967753	0.370421	Sox6_Sox9	ENSMUST00000022081.1|Spata9|ENSMUSG00000021590.6|spermatogenesis associated 9
mm10_v2_chrX_+_112600526_112600526	0.369389	Sox6_Sox9	ENSMUST00000113409.1|Zfp711|ENSMUSG00000025529.8|zinc finger protein 711
mm10_v2_chrX_+_96456362_96456390	0.368331	Sox6_Sox9	ENSMUST00000079322.5|Heph|ENSMUSG00000031209.8|hephaestin 	ENSMUST00000113838.1|Heph|ENSMUSG00000031209.8|hephaestin
mm10_v2_chr12_+_24708241_24708292	0.361111	Sox6_Sox9	ENSMUST00000020980.5|Rrm2|ENSMUSG00000020649.5|ribonucleotide reductase M2
mm10_v2_chr3_+_101377074_101377158	0.360507	Sox6_Sox9	ENSMUST00000043983.5|Igsf3|ENSMUSG00000042035.6|immunoglobulin superfamily, member 3
mm10_v2_chr15_-_79658749_79658798	0.359273	Sox6_Sox9	ENSMUST00000109646.2|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A
mm10_v2_chr11_+_32455362_32455438	0.355766	Sox6_Sox9	ENSMUST00000051053.4|Ubtd2|ENSMUSG00000044949.4|ubiquitin domain containing 2
mm10_v2_chr4_+_100776664_100776692	0.351718	Sox6_Sox9	ENSMUST00000030257.8|Cachd1|ENSMUSG00000028532.8|cache domain containing 1 	ENSMUST00000097955.2|Cachd1|ENSMUSG00000028532.8|cache domain containing 1
mm10_v2_chrX_+_56779699_56779819	0.345905	Sox6_Sox9	ENSMUST00000114772.2|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1 	ENSMUST00000114768.3|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1 	ENSMUST00000155882.1|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr13_+_93304940_93305278	0.345064	Sox6_Sox9	ENSMUST00000109497.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109498.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000060490.4|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109492.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109496.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila) 	ENSMUST00000109495.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr5_-_105051047_105051047	0.344933	Sox6_Sox9	ENSMUST00000112718.4|Gbp8|ENSMUSG00000034438.10|guanylate-binding protein 8
mm10_v2_chr7_-_103813913_103813996	0.340061	Sox6_Sox9	ENSMUST00000098192.3|Hbb-bt|ENSMUSG00000073940.3|hemoglobin, beta adult t chain
mm10_v2_chr19_+_44293676_44293676	0.339172	Sox6_Sox9	ENSMUST00000026221.5|Scd2|ENSMUSG00000025203.5|stearoyl-Coenzyme A desaturase 2
mm10_v2_chr12_+_51348265_51348368	0.332903	Sox6_Sox9	ENSMUST00000119211.1|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chr5_+_66968559_66968577	0.332189	Sox6_Sox9	ENSMUST00000127184.1|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr11_+_87760533_87760587	0.327201	Sox6_Sox9	ENSMUST00000039627.5|Bzrap1|ENSMUSG00000034156.10|benzodiazepine receptor associated protein 1 	ENSMUST00000100644.3|Bzrap1|ENSMUSG00000034156.10|benzodiazepine receptor associated protein 1
mm10_v2_chr5_-_131616599_131616611	0.324501	Sox6_Sox9	ENSMUST00000161804.1|Auts2|ENSMUSG00000029673.11|autism susceptibility candidate 2
mm10_v2_chr1_-_163289214_163289235	0.322948	Sox6_Sox9	ENSMUST00000183691.1|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1
mm10_v2_chr6_+_17065129_17065233	0.321585	Sox6_Sox9	ENSMUST00000115467.4|Tes|ENSMUSG00000029552.13|testis derived transcript 	ENSMUST00000154266.2|Tes|ENSMUSG00000029552.13|testis derived transcript 	ENSMUST00000076654.7|Tes|ENSMUSG00000029552.13|testis derived transcript
mm10_v2_chr10_+_88091070_88091076	0.320334	Sox6_Sox9	ENSMUST00000048621.7|Pmch|ENSMUSG00000035383.7|pro-melanin-concentrating hormone
mm10_v2_chr13_-_106847267_106847267	0.317548	Sox6_Sox9	ENSMUST00000057427.4|Lrrc70|ENSMUSG00000078933.1|leucine rich repeat containing 70
mm10_v2_chr12_+_84996309_84996419	0.316143	Sox6_Sox9	ENSMUST00000168977.1|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1 	ENSMUST00000021670.8|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1
mm10_v2_chrX_-_167209149_167209164	0.316098	Sox6_Sox9	ENSMUST00000112176.1|Tmsb4x|ENSMUSG00000049775.10|thymosin, beta 4, X chromosome
mm10_v2_chr12_+_51348370_51348406	0.310954	Sox6_Sox9	ENSMUST00000121521.1|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chr10_+_93831555_93831555	0.30612	Sox6_Sox9	ENSMUST00000095333.4|Usp44|ENSMUSG00000020020.7|ubiquitin specific peptidase 44
mm10_v2_chr16_+_17276662_17276680	0.305281	Sox6_Sox9	ENSMUST00000069420.4|Tmem191c|ENSMUSG00000055692.12|transmembrane protein 191C
mm10_v2_chr4_+_109415631_109415648	0.30047	Sox6_Sox9	ENSMUST00000106618.1|Ttc39a|ENSMUSG00000028555.9|tetratricopeptide repeat domain 39A
mm10_v2_chr3_-_127499095_127499137	0.299987	Sox6_Sox9	ENSMUST00000182594.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr5_+_26904682_26904710	0.296344	Sox6_Sox9	ENSMUST00000120555.1|Dpp6|ENSMUSG00000061576.9|dipeptidylpeptidase 6
mm10_v2_chr5_-_17835857_17835896	0.295273	Sox6_Sox9	ENSMUST00000082367.6|Cd36|ENSMUSG00000002944.9|CD36 antigen
mm10_v2_chr2_-_157079212_157079276	0.288898	Sox6_Sox9	ENSMUST00000069098.6|Soga1|ENSMUSG00000055485.6|suppressor of glucose, autophagy associated 1
mm10_v2_chr7_+_99381495_99381555	0.287743	Sox6_Sox9	ENSMUST00000037528.8|Gdpd5|ENSMUSG00000035314.8|glycerophosphodiester phosphodiesterase domain containing 5
mm10_v2_chr9_-_32541589_32541602	0.287037	Sox6_Sox9	ENSMUST00000016231.7|Fli1|ENSMUSG00000016087.7|Friend leukemia integration 1
mm10_v2_chr4_+_127021311_127021339	0.286256	Sox6_Sox9	ENSMUST00000030623.7|Sfpq|ENSMUSG00000028820.7|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm10_v2_chr7_-_13009795_13009856	0.285739	Sox6_Sox9	ENSMUST00000051390.7|Zbtb45|ENSMUSG00000049600.7|zinc finger and BTB domain containing 45 	ENSMUST00000172240.1|Zbtb45|ENSMUSG00000049600.7|zinc finger and BTB domain containing 45
mm10_v2_chr1_-_119836999_119837139	0.282113	Sox6_Sox9	ENSMUST00000163621.1|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4 	ENSMUST00000168303.1|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr6_+_125552948_125552980	0.280567	Sox6_Sox9	ENSMUST00000112254.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000112253.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000001995.7|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog
mm10_v2_chr8_-_89147247_89147251	0.279465	Sox6_Sox9	ENSMUST00000177870.1|Gm6625|ENSMUSG00000094790.1|predicted gene 6625
mm10_v2_chr1_-_72874877_72874891	0.277865	Sox6_Sox9	ENSMUST00000027377.8|Igfbp5|ENSMUSG00000026185.8|insulin-like growth factor binding protein 5
mm10_v2_chr19_-_47692042_47692094	0.276689	Sox6_Sox9	ENSMUST00000026045.7|Col17a1|ENSMUSG00000025064.8|collagen, type XVII, alpha 1 	ENSMUST00000086923.5|Col17a1|ENSMUSG00000025064.8|collagen, type XVII, alpha 1
mm10_v2_chr15_+_100038635_100038669	0.274176	Sox6_Sox9	ENSMUST00000100203.3|Dip2b|ENSMUSG00000023026.9|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm10_v2_chr2_-_163645125_163645136	0.272175	Sox6_Sox9	ENSMUST00000017851.3|Serinc3|ENSMUSG00000017707.9|serine incorporator 3
mm10_v2_chr15_-_85821733_85821801	0.272058	Sox6_Sox9	ENSMUST00000064370.4|Pkdrej|ENSMUSG00000052496.4|polycystic kidney disease (polycystin) and REJ (sperm receptor for egg jelly homolog, sea urchin)
mm10_v2_chr17_+_47140942_47140942	0.271802	Sox6_Sox9	ENSMUST00000077951.7|Trerf1|ENSMUSG00000064043.7|transcriptional regulating factor 1
mm10_v2_chr6_-_52226165_52226196	0.270697	Sox6_Sox9	ENSMUST00000114425.2|Hoxa9|ENSMUSG00000038227.9|homeobox A9
mm10_v2_chr15_-_98482683_98482705	0.26745	Sox6_Sox9	ENSMUST00000023726.3|Lalba|ENSMUSG00000022991.4|lactalbumin, alpha
mm10_v2_chr5_+_74535535_74535558	0.263428	Sox6_Sox9	ENSMUST00000121950.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae)
mm10_v2_chr4_-_44168339_44168371	0.262341	Sox6_Sox9	ENSMUST00000045793.8|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr19_+_47579602_47579681	0.262111	Sox6_Sox9	ENSMUST00000026043.5|Slk|ENSMUSG00000025060.8|STE20-like kinase
mm10_v2_chr17_+_12119274_12119348	0.261309	Sox6_Sox9	ENSMUST00000024594.2|Agpat4|ENSMUSG00000023827.2|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm10_v2_chr19_-_56822161_56822220	0.258935	Sox6_Sox9	ENSMUST00000118592.1|A630007B06Rik|ENSMUSG00000035173.8|RIKEN cDNA A630007B06 gene
mm10_v2_chr7_-_81934316_81934473	0.258495	Sox6_Sox9	ENSMUST00000026094.5|Hdgfrp3|ENSMUSG00000025104.7|hepatoma-derived growth factor, related protein 3 	ENSMUST00000107305.1|Hdgfrp3|ENSMUSG00000025104.7|hepatoma-derived growth factor, related protein 3
mm10_v2_chr9_+_110763646_110763702	0.257287	Sox6_Sox9	ENSMUST00000079784.7|Myl3|ENSMUSG00000059741.7|myosin, light polypeptide 3
mm10_v2_chr4_-_132345715_132345747	0.254886	Sox6_Sox9	ENSMUST00000084250.4|Rcc1|ENSMUSG00000028896.7|regulator of chromosome condensation 1
mm10_v2_chr1_-_119837613_119837673	0.251915	Sox6_Sox9	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr6_-_29212240_29212297	0.250271	Sox6_Sox9	ENSMUST00000160878.1|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1 	ENSMUST00000078155.5|Impdh1|ENSMUSG00000003500.7|inosine 5'-phosphate dehydrogenase 1
mm10_v2_chr4_-_134704235_134704295	0.24688	Sox6_Sox9	ENSMUST00000054096.6|Man1c1|ENSMUSG00000037306.7|mannosidase, alpha, class 1C, member 1 	ENSMUST00000038628.3|Man1c1|ENSMUSG00000037306.7|mannosidase, alpha, class 1C, member 1
mm10_v2_chr18_-_88927447_88927481	0.244525	Sox6_Sox9	ENSMUST00000147313.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr4_+_108460000_108460030	0.240756	Sox6_Sox9	ENSMUST00000097925.2|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr15_-_79254737_79254764	0.238191	Sox6_Sox9	ENSMUST00000039752.3|Slc16a8|ENSMUSG00000032988.3|solute carrier family 16 (monocarboxylic acid transporters), member 8
mm10_v2_chr5_+_48242549_48242549	0.237194	Sox6_Sox9	ENSMUST00000172493.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila)
mm10_v2_chr4_-_116405986_116406120	0.235436	Sox6_Sox9	ENSMUST00000123072.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2 	ENSMUST00000144281.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2
mm10_v2_chr17_-_35838208_35838243	0.235031	Sox6_Sox9	ENSMUST00000134978.2|Tubb5|ENSMUSG00000001525.9|tubulin, beta 5 class I
mm10_v2_chr10_+_42860348_42860377	0.234224	Sox6_Sox9	ENSMUST00000063063.7|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr13_+_65278839_65278903	0.233432	Sox6_Sox9	ENSMUST00000155732.1|Zfp369|ENSMUSG00000021514.11|zinc finger protein 369
mm10_v2_chr16_+_17070127_17070215	0.232612	Sox6_Sox9	ENSMUST00000115729.1|Ypel1|ENSMUSG00000022773.10|yippee-like 1 (Drosophila)
mm10_v2_chr11_-_62392605_62392659	0.230662	Sox6_Sox9	ENSMUST00000151498.2|Ncor1|ENSMUSG00000018501.11|nuclear receptor co-repressor 1 	ENSMUST00000159069.1|Ncor1|ENSMUSG00000018501.11|nuclear receptor co-repressor 1
mm10_v2_chr13_-_41358990_41359006	0.229161	Sox6_Sox9	ENSMUST00000163623.1|Nedd9|ENSMUSG00000021365.8|neural precursor cell expressed, developmentally down-regulated gene 9
mm10_v2_chr18_+_37333853_37333946	0.228411	Sox6_Sox9	ENSMUST00000061717.2|Pcdhb6|ENSMUSG00000051678.3|protocadherin beta 6
mm10_v2_chr4_+_48585135_48585187	0.227333	Sox6_Sox9	ENSMUST00000030032.6|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr19_+_40831296_40831313	0.22415	Sox6_Sox9	ENSMUST00000119316.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr2_+_4559742_4559756	0.218803	Sox6_Sox9	ENSMUST00000176828.1|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr13_+_20794119_20794179	0.218405	Sox6_Sox9	ENSMUST00000021757.3|Aoah|ENSMUSG00000021322.7|acyloxyacyl hydrolase
mm10_v2_chr6_-_42710036_42710120	0.218249	Sox6_Sox9	ENSMUST00000045054.4|Fam115a|ENSMUSG00000036667.8|family with sequence similarity 115, member A
mm10_v2_chr16_+_20517000_20517072	0.215369	Sox6_Sox9	ENSMUST00000171572.1|Dvl3|ENSMUSG00000003233.5|dishevelled 3, dsh homolog (Drosophila)
mm10_v2_chr11_-_76468396_76468473	0.214368	Sox6_Sox9	ENSMUST00000065028.7|Abr|ENSMUSG00000017631.12|active BCR-related gene
mm10_v2_chrX_-_23285532_23285578	0.212598	Sox6_Sox9	ENSMUST00000115319.2|Klhl13|ENSMUSG00000036782.7|kelch-like 13
mm10_v2_chr10_-_117376922_117376954	0.210942	Sox6_Sox9	ENSMUST00000177145.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6 	ENSMUST00000176670.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6
mm10_v2_chr9_+_57825918_57825945	0.210689	Sox6_Sox9	ENSMUST00000165858.1|Gm17231|ENSMUSG00000091908.1|predicted gene 17231
mm10_v2_chr8_-_84197667_84197680	0.208659	Sox6_Sox9	ENSMUST00000181282.1|Gm26887|ENSMUSG00000097120.1|predicted gene, 26887
mm10_v2_chr2_-_152398046_152398076	0.208517	Sox6_Sox9	ENSMUST00000063332.8|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12 	ENSMUST00000182625.1|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12
mm10_v2_chr4_-_115781012_115781023	0.20836	Sox6_Sox9	ENSMUST00000106521.1|Tex38|ENSMUSG00000044556.3|testis expressed 38
mm10_v2_chr7_-_30588717_30588749	0.206857	Sox6_Sox9	ENSMUST00000006470.7|Kmt2b|ENSMUSG00000006307.10|lysine (K)-specific methyltransferase 2B 	ENSMUST00000108154.2|Kmt2b|ENSMUSG00000006307.10|lysine (K)-specific methyltransferase 2B
mm10_v2_chr18_-_43059418_43059471	0.204221	Sox6_Sox9	ENSMUST00000025377.7|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chr4_-_44168252_44168289	0.203716	Sox6_Sox9	ENSMUST00000145760.1|Rnf38|ENSMUSG00000035696.9|ring finger protein 38 	ENSMUST00000128426.1|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr9_-_107770945_107771007	0.203642	Sox6_Sox9	ENSMUST00000183248.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000182022.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000035199.6|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5 	ENSMUST00000182659.1|Rbm5|ENSMUSG00000032580.6|RNA binding motif protein 5
mm10_v2_chr4_-_148130678_148130706	0.202759	Sox6_Sox9	ENSMUST00000030862.4|Draxin|ENSMUSG00000029005.4|dorsal inhibitory axon guidance protein
mm10_v2_chr4_-_132049058_132049156	0.201604	Sox6_Sox9	ENSMUST00000105981.2|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1 	ENSMUST00000084253.3|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1 	ENSMUST00000141291.1|Epb4.1|ENSMUSG00000028906.9|erythrocyte protein band 4.1
mm10_v2_chr19_+_53600377_53600435	0.200528	Sox6_Sox9	ENSMUST00000025930.9|Smc3|ENSMUSG00000024974.10|structural maintenance of chromosomes 3
mm10_v2_chrX_+_56963325_56963325	0.199121	Sox6_Sox9	ENSMUST00000096431.3|Gpr112|ENSMUSG00000053852.5|G protein-coupled receptor 112
mm10_v2_chr14_+_79515618_79515694	0.199059	Sox6_Sox9	ENSMUST00000110835.1|Elf1|ENSMUSG00000036461.9|E74-like factor 1
mm10_v2_chr17_-_34615965_34615978	0.197204	Sox6_Sox9	ENSMUST00000097345.3|Egfl8|ENSMUSG00000015467.8|EGF-like domain 8 	ENSMUST00000015611.7|Egfl8|ENSMUSG00000015467.8|EGF-like domain 8
mm10_v2_chr13_+_14063776_14063822	0.196025	Sox6_Sox9	ENSMUST00000129488.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110536.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110534.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000039538.8|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110533.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like)
mm10_v2_chr11_-_49187037_49187076	0.195773	Sox6_Sox9	ENSMUST00000153999.1|Btnl9|ENSMUSG00000040283.8|butyrophilin-like 9 	ENSMUST00000066531.6|Btnl9|ENSMUSG00000040283.8|butyrophilin-like 9
mm10_v2_chr16_+_20516962_20516999	0.195311	Sox6_Sox9	ENSMUST00000003318.5|Dvl3|ENSMUSG00000003233.5|dishevelled 3, dsh homolog (Drosophila)
mm10_v2_chr6_-_13839916_13839942	0.193111	Sox6_Sox9	ENSMUST00000060442.7|Gpr85|ENSMUSG00000048216.7|G protein-coupled receptor 85
mm10_v2_chr11_-_96977660_96977711	0.193068	Sox6_Sox9	ENSMUST00000107626.1|Sp2|ENSMUSG00000018678.6|Sp2 transcription factor 	ENSMUST00000107624.1|Sp2|ENSMUSG00000018678.6|Sp2 transcription factor
mm10_v2_chr4_-_58499398_58499409	0.191078	Sox6_Sox9	ENSMUST00000107570.1|Lpar1|ENSMUSG00000038668.8|lysophosphatidic acid receptor 1
mm10_v2_chr4_-_135873546_135873606	0.189594	Sox6_Sox9	ENSMUST00000142585.1|Pnrc2|ENSMUSG00000028675.6|proline-rich nuclear receptor coactivator 2
mm10_v2_chr16_-_76373014_76373103	0.187299	Sox6_Sox9	ENSMUST00000054178.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr17_-_34615776_34615793	0.186842	Sox6_Sox9	ENSMUST00000168353.2|Egfl8|ENSMUSG00000015467.8|EGF-like domain 8
mm10_v2_chr4_-_44167988_44168008	0.186482	Sox6_Sox9	ENSMUST00000143337.1|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr7_-_83884289_83884341	0.184982	Sox6_Sox9	ENSMUST00000094216.3|Mesdc1|ENSMUSG00000070462.3|mesoderm development candidate 1
mm10_v2_chr14_+_47663756_47663756	0.183923	Sox6_Sox9	ENSMUST00000022391.7|Ktn1|ENSMUSG00000021843.10|kinectin 1
mm10_v2_chr15_-_12592556_12592556	0.181982	Sox6_Sox9	ENSMUST00000075317.5|Pdzd2|ENSMUSG00000022197.9|PDZ domain containing 2
mm10_v2_chr8_+_106415319_106415396	0.178879	Sox6_Sox9	ENSMUST00000034382.7|Zfp90|ENSMUSG00000031907.8|zinc finger protein 90
mm10_v2_chr10_-_117376955_117376978	0.178448	Sox6_Sox9	ENSMUST00000069168.6|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6 	ENSMUST00000176686.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6
mm10_v2_chr7_+_97081711_97081778	0.177509	Sox6_Sox9	ENSMUST00000004622.5|Gab2|ENSMUSG00000004508.5|growth factor receptor bound protein 2-associated protein 2
mm10_v2_chr16_-_44558864_44558875	0.175875	Sox6_Sox9	ENSMUST00000023370.4|Boc|ENSMUSG00000022687.5|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein
mm10_v2_chr2_-_37703845_37703885	0.174554	Sox6_Sox9	ENSMUST00000155237.1|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr14_+_62663665_62663672	0.173823	Sox6_Sox9	ENSMUST00000171692.1|Serpine3|ENSMUSG00000091155.1|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3
mm10_v2_chrX_-_59166080_59166164	0.172868	Sox6_Sox9	ENSMUST00000119306.1|Fgf13|ENSMUSG00000031137.11|fibroblast growth factor 13
mm10_v2_chr4_+_137993016_137993036	0.172627	Sox6_Sox9	ENSMUST00000105830.2|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3 	ENSMUST00000084215.5|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3 	ENSMUST00000058133.3|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3 	ENSMUST00000139759.1|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3
mm10_v2_chr8_-_85555261_85555315	0.172485	Sox6_Sox9	ENSMUST00000034138.5|Dnaja2|ENSMUSG00000031701.5|DnaJ (Hsp40) homolog, subfamily A, member 2
mm10_v2_chr5_+_3928267_3928300	0.172167	Sox6_Sox9	ENSMUST00000044492.8|Akap9|ENSMUSG00000040407.11|A kinase (PRKA) anchor protein (yotiao) 9
mm10_v2_chr5_+_74535449_74535524	0.171059	Sox6_Sox9	ENSMUST00000080164.5|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113536.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000122245.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000120618.1|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113535.2|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae) 	ENSMUST00000113534.2|Fip1l1|ENSMUSG00000029227.9|FIP1 like 1 (S. cerevisiae)
mm10_v2_chr19_-_46327121_46327156	0.170256	Sox6_Sox9	ENSMUST00000041391.4|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing 	ENSMUST00000096029.5|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing
mm10_v2_chr7_-_113347273_113347293	0.170153	Sox6_Sox9	ENSMUST00000117577.1|Btbd10|ENSMUSG00000038187.8|BTB (POZ) domain containing 10
mm10_v2_chr4_+_48585193_48585215	0.169448	Sox6_Sox9	ENSMUST00000107703.1|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr2_-_165326435_165326486	0.166922	Sox6_Sox9	ENSMUST00000094329.4|Elmo2|ENSMUSG00000017670.10|engulfment and cell motility 2 	ENSMUST00000074046.6|Elmo2|ENSMUSG00000017670.10|engulfment and cell motility 2 	ENSMUST00000103088.3|Elmo2|ENSMUSG00000017670.10|engulfment and cell motility 2 	ENSMUST00000128690.1|Elmo2|ENSMUSG00000017670.10|engulfment and cell motility 2
mm10_v2_chr15_+_6386598_6386785	0.166201	Sox6_Sox9	ENSMUST00000080880.5|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000110664.2|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000110663.2|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000161812.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein 	ENSMUST00000160134.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr2_-_20968526_20968625	0.163647	Sox6_Sox9	ENSMUST00000141298.2|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21 	ENSMUST00000125783.2|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr10_-_116473418_116473514	0.162593	Sox6_Sox9	ENSMUST00000087965.4|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4 	ENSMUST00000164271.1|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm10_v2_chr9_+_110532501_110532600	0.162266	Sox6_Sox9	ENSMUST00000153838.2|Setd2|ENSMUSG00000044791.10|SET domain containing 2
mm10_v2_chr11_+_101733011_101733041	0.162012	Sox6_Sox9	ENSMUST00000129741.1|Dhx8|ENSMUSG00000034931.9|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm10_v2_chrX_+_20425688_20425762	0.161174	Sox6_Sox9	ENSMUST00000115384.2|Phf16|ENSMUSG00000037315.8|PHD finger protein 16
mm10_v2_chr2_-_6884940_6884957	0.160726	Sox6_Sox9	ENSMUST00000183091.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000182851.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr3_+_31902507_31902659	0.159786	Sox6_Sox9	ENSMUST00000119310.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2
mm10_v2_chr6_-_47594967_47595047	0.157953	Sox6_Sox9	ENSMUST00000081721.6|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila) 	ENSMUST00000114618.1|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila) 	ENSMUST00000114616.1|Ezh2|ENSMUSG00000029687.10|enhancer of zeste homolog 2 (Drosophila)
mm10_v2_chr1_-_153487639_153487662	0.157762	Sox6_Sox9	ENSMUST00000042141.5|Dhx9|ENSMUSG00000042699.5|DEAH (Asp-Glu-Ala-His) box polypeptide 9
mm10_v2_chr17_-_35838259_35838306	0.156889	Sox6_Sox9	ENSMUST00000001566.8|Tubb5|ENSMUSG00000001525.9|tubulin, beta 5 class I
mm10_v2_chr11_+_97415527_97415538	0.156665	Sox6_Sox9	ENSMUST00000121799.1|Arhgap23|ENSMUSG00000049807.10|Rho GTPase activating protein 23
mm10_v2_chr3_-_10208569_10208586	0.153977	Sox6_Sox9	ENSMUST00000029041.4|Fabp4|ENSMUSG00000062515.2|fatty acid binding protein 4, adipocyte
mm10_v2_chr10_-_37138863_37138937	0.153975	Sox6_Sox9	ENSMUST00000092584.5|Marcks|ENSMUSG00000069662.5|myristoylated alanine rich protein kinase C substrate
mm10_v2_chr12_+_84996487_84996496	0.151883	Sox6_Sox9	ENSMUST00000101202.3|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1
mm10_v2_chr6_+_11925869_11925941	0.150631	Sox6_Sox9	ENSMUST00000115510.1|Phf14|ENSMUSG00000029629.10|PHD finger protein 14 	ENSMUST00000115511.2|Phf14|ENSMUSG00000029629.10|PHD finger protein 14 	ENSMUST00000090632.4|Phf14|ENSMUSG00000029629.10|PHD finger protein 14
mm10_v2_chr10_-_83534130_83534141	0.150184	Sox6_Sox9	ENSMUST00000020497.7|Aldh1l2|ENSMUSG00000020256.8|aldehyde dehydrogenase 1 family, member L2
mm10_v2_chr11_-_120598346_120598405	0.149047	Sox6_Sox9	ENSMUST00000026125.2|Alyref|ENSMUSG00000025134.2|Aly/REF export factor
mm10_v2_chr8_-_21594508_21594508	0.148827	Sox6_Sox9	ENSMUST00000110749.3|Gm7861|ENSMUSG00000079113.3|predicted gene 7861
mm10_v2_chr18_-_24121810_24121953	0.145935	Sox6_Sox9	ENSMUST00000055012.5|Ino80c|ENSMUSG00000047989.5|INO80 complex subunit C 	ENSMUST00000153360.1|Ino80c|ENSMUSG00000047989.5|INO80 complex subunit C 	ENSMUST00000141489.1|Ino80c|ENSMUSG00000047989.5|INO80 complex subunit C
mm10_v2_chr4_-_34882919_34882964	0.145529	Sox6_Sox9	ENSMUST00000098163.2|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292 	ENSMUST00000047950.5|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292
mm10_v2_chr1_-_168431502_168431513	0.144717	Sox6_Sox9	ENSMUST00000064438.4|Pbx1|ENSMUSG00000052534.9|pre B cell leukemia homeobox 1
mm10_v2_chr5_+_142960343_142960363	0.143041	Sox6_Sox9	ENSMUST00000031565.8|Fscn1|ENSMUSG00000029581.8|fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)
mm10_v2_chr14_+_59201418_59201503	0.14289	Sox6_Sox9	ENSMUST00000140136.2|Rcbtb1|ENSMUSG00000035469.11|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 	ENSMUST00000142326.1|Rcbtb1|ENSMUSG00000035469.11|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
mm10_v2_chr5_-_100038869_100038885	0.142122	Sox6_Sox9	ENSMUST00000153442.1|Hnrnpdl|ENSMUSG00000029328.9|heterogeneous nuclear ribonucleoprotein D-like
mm10_v2_chr17_+_53479212_53479237	0.141403	Sox6_Sox9	ENSMUST00000017975.5|Rab5a|ENSMUSG00000017831.7|RAB5A, member RAS oncogene family
mm10_v2_chr2_-_6884975_6884996	0.140869	Sox6_Sox9	ENSMUST00000114924.3|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000170438.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000114934.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr8_-_69184177_69184240	0.140771	Sox6_Sox9	ENSMUST00000185176.1|Lzts1|ENSMUSG00000036306.5|leucine zipper, putative tumor suppressor 1
mm10_v2_chr2_-_143862933_143862950	0.140555	Sox6_Sox9	ENSMUST00000099296.3|Bfsp1|ENSMUSG00000027420.7|beaded filament structural protein 1, in lens-CP94
mm10_v2_chr2_+_26315513_26315602	0.140132	Sox6_Sox9	ENSMUST00000066936.2|Gpsm1|ENSMUSG00000026930.9|G-protein signalling modulator 1 (AGS3-like, C. elegans) 	ENSMUST00000078616.5|Gpsm1|ENSMUSG00000026930.9|G-protein signalling modulator 1 (AGS3-like, C. elegans)
mm10_v2_chr19_+_55180799_55180885	0.13448	Sox6_Sox9	ENSMUST00000025936.5|Tectb|ENSMUSG00000024979.7|tectorin beta
mm10_v2_chr13_-_14063395_14063436	0.133835	Sox6_Sox9	ENSMUST00000170957.1|Ggps1|ENSMUSG00000021302.9|geranylgeranyl diphosphate synthase 1
mm10_v2_chr15_+_25622525_25622558	0.13368	Sox6_Sox9	ENSMUST00000110457.1|Myo10|ENSMUSG00000022272.11|myosin X 	ENSMUST00000137601.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr5_-_123721007_123721062	0.132615	Sox6_Sox9	ENSMUST00000031376.7|Zcchc8|ENSMUSG00000029427.7|zinc finger, CCHC domain containing 8
mm10_v2_chrX_+_166238901_166238914	0.131553	Sox6_Sox9	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr10_+_14523062_14523065	0.130474	Sox6_Sox9	ENSMUST00000096020.5|Gm10335|ENSMUSG00000071532.5|predicted gene 10335
mm10_v2_chr11_-_49187159_49187195	0.130033	Sox6_Sox9	ENSMUST00000046522.6|Btnl9|ENSMUSG00000040283.8|butyrophilin-like 9
mm10_v2_chr5_+_43515513_43515588	0.128718	Sox6_Sox9	ENSMUST00000167522.1|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7 	ENSMUST00000144558.1|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7 	ENSMUST00000076939.6|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7
mm10_v2_chr13_+_55399648_55399700	0.128407	Sox6_Sox9	ENSMUST00000057167.7|Slc34a1|ENSMUSG00000021490.10|solute carrier family 34 (sodium phosphate), member 1
mm10_v2_chr7_-_3845050_3845051	0.128221	Sox6_Sox9	ENSMUST00000108615.3|Pira2|ENSMUSG00000089942.3|paired-Ig-like receptor A2 	ENSMUST00000119469.1|Pira2|ENSMUSG00000089942.3|paired-Ig-like receptor A2
mm10_v2_chr15_-_85503227_85503227	0.127013	Sox6_Sox9	ENSMUST00000178942.1|7530416G11Rik|ENSMUSG00000096607.1|RIKEN cDNA 7530416G11 gene
mm10_v2_chr2_-_165898951_165899016	0.126307	Sox6_Sox9	ENSMUST00000136842.1|Zmynd8|ENSMUSG00000039671.12|zinc finger, MYND-type containing 8
mm10_v2_chr12_+_17690793_17690823	0.125916	Sox6_Sox9	ENSMUST00000071858.3|Hpcal1|ENSMUSG00000071379.1|hippocalcin-like 1
mm10_v2_chr19_-_7241216_7241226	0.124403	Sox6_Sox9	ENSMUST00000025675.9|Naa40|ENSMUSG00000024764.9|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
mm10_v2_chr13_+_93304799_93304935	0.122044	Sox6_Sox9	ENSMUST00000080127.5|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr13_+_93304066_93304138	0.121109	Sox6_Sox9	ENSMUST00000109493.1|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr9_-_79718631_79718678	0.12101	Sox6_Sox9	ENSMUST00000180083.1|Col12a1|ENSMUSG00000032332.11|collagen, type XII, alpha 1
mm10_v2_chr16_-_44558879_44558905	0.119691	Sox6_Sox9	ENSMUST00000114634.1|Boc|ENSMUSG00000022687.5|biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein
mm10_v2_chr12_-_34528844_34528904	0.119018	Sox6_Sox9	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr2_+_156312299_156312426	0.118526	Sox6_Sox9	ENSMUST00000037096.2|Cnbd2|ENSMUSG00000038085.7|cyclic nucleotide binding domain containing 2
mm10_v2_chr4_+_140701466_140701509	0.116758	Sox6_Sox9	ENSMUST00000038893.5|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2 	ENSMUST00000138808.1|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2
mm10_v2_chr6_-_3494587_3494598	0.115856	Sox6_Sox9	ENSMUST00000049985.8|Hepacam2|ENSMUSG00000044156.8|HEPACAM family member 2
mm10_v2_chr16_-_19515634_19515634	0.115751	Sox6_Sox9	ENSMUST00000054606.1|Olfr167|ENSMUSG00000045341.1|olfactory receptor 167
mm10_v2_chr11_+_101732950_101732965	0.115126	Sox6_Sox9	ENSMUST00000039152.7|Dhx8|ENSMUSG00000034931.9|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm10_v2_chr3_-_116807733_116807755	0.114927	Sox6_Sox9	ENSMUST00000159670.1|Agl|ENSMUSG00000033400.8|amylo-1,6-glucosidase, 4-alpha-glucanotransferase
mm10_v2_chr9_+_13765970_13766043	0.114812	Sox6_Sox9	ENSMUST00000152532.1|Mtmr2|ENSMUSG00000031918.10|myotubularin related protein 2
mm10_v2_chr15_-_79658889_79658956	0.114671	Sox6_Sox9	ENSMUST00000109648.2|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A 	ENSMUST00000046816.6|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A
mm10_v2_chr11_+_94044111_94044121	0.113442	Sox6_Sox9	ENSMUST00000132079.1|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr7_-_28372233_28372371	0.112309	Sox6_Sox9	ENSMUST00000094644.4|Plekhg2|ENSMUSG00000037552.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
mm10_v2_chr5_+_30711564_30711586	0.111666	Sox6_Sox9	ENSMUST00000114729.1|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr5_-_65537139_65537184	0.109139	Sox6_Sox9	ENSMUST00000149167.1|Smim14|ENSMUSG00000037822.6|small integral membrane protein 14
mm10_v2_chr4_+_86874396_86874438	0.108317	Sox6_Sox9	ENSMUST00000045224.7|Acer2|ENSMUSG00000038007.8|alkaline ceramidase 2 	ENSMUST00000084433.4|Acer2|ENSMUSG00000038007.8|alkaline ceramidase 2
mm10_v2_chr6_-_31563978_31563989	0.107777	Sox6_Sox9	ENSMUST00000026698.7|Podxl|ENSMUSG00000025608.9|podocalyxin-like
mm10_v2_chr7_-_133122615_133122762	0.107296	Sox6_Sox9	ENSMUST00000167218.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr4_+_137993445_137993474	0.107084	Sox6_Sox9	ENSMUST00000105831.2|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3 	ENSMUST00000084214.5|Eif4g3|ENSMUSG00000028760.10|eukaryotic translation initiation factor 4 gamma, 3
mm10_v2_chr10_-_130394241_130394241	0.107003	Sox6_Sox9	ENSMUST00000094502.4|Vmn2r84|ENSMUSG00000070601.4|vomeronasal 2, receptor 84
mm10_v2_chr4_-_135873801_135873853	0.106878	Sox6_Sox9	ENSMUST00000030436.5|Pnrc2|ENSMUSG00000028675.6|proline-rich nuclear receptor coactivator 2
mm10_v2_chr10_+_67096456_67096534	0.10637	Sox6_Sox9	ENSMUST00000174317.1|Jmjd1c|ENSMUSG00000037876.10|jumonji domain containing 1C
mm10_v2_chr9_+_27790947_27790991	0.10633	Sox6_Sox9	ENSMUST00000115243.2|Opcml|ENSMUSG00000062257.6|opioid binding protein/cell adhesion molecule-like
mm10_v2_chr5_-_8367982_8368107	0.105264	Sox6_Sox9	ENSMUST00000088761.4|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115386.1|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000050166.7|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000046838.7|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115388.2|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000088744.5|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115385.1|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22
mm10_v2_chr5_-_120777628_120777664	0.104451	Sox6_Sox9	ENSMUST00000044833.8|Oas3|ENSMUSG00000032661.8|2'-5' oligoadenylate synthetase 3
mm10_v2_chr9_-_78480736_78480841	0.104175	Sox6_Sox9	ENSMUST00000156988.1|Eef1a1|ENSMUSG00000037742.8|eukaryotic translation elongation factor 1 alpha 1
mm10_v2_chr1_+_66386968_66386999	0.103769	Sox6_Sox9	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr5_+_30711849_30711905	0.102083	Sox6_Sox9	ENSMUST00000088081.4|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5 	ENSMUST00000101442.3|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr11_-_30268169_30268191	0.10035	Sox6_Sox9	ENSMUST00000006629.7|Sptbn1|ENSMUSG00000020315.12|spectrin beta, non-erythrocytic 1
mm10_v2_chr6_-_24168083_24168097	0.100349	Sox6_Sox9	ENSMUST00000031713.8|Slc13a1|ENSMUSG00000029700.11|solute carrier family 13 (sodium/sulfate symporters), member 1
mm10_v2_chr15_-_77153772_77153817	0.100222	Sox6_Sox9	ENSMUST00000166610.1|Rbfox2|ENSMUSG00000033565.10|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENSMUST00000111581.2|Rbfox2|ENSMUSG00000033565.10|RNA binding protein, fox-1 homolog (C. elegans) 2
mm10_v2_chr3_-_66296807_66296837	0.0989224	Sox6_Sox9	ENSMUST00000029419.7|Veph1|ENSMUSG00000027831.9|ventricular zone expressed PH domain-containing 1
mm10_v2_chr1_+_165485168_165485206	0.098578	Sox6_Sox9	ENSMUST00000111440.1|Adcy10|ENSMUSG00000026567.10|adenylate cyclase 10 	ENSMUST00000027852.8|Adcy10|ENSMUSG00000026567.10|adenylate cyclase 10 	ENSMUST00000111439.1|Adcy10|ENSMUSG00000026567.10|adenylate cyclase 10
mm10_v2_chr1_+_75546449_75546514	0.0970249	Sox6_Sox9	ENSMUST00000150142.1|Slc4a3|ENSMUSG00000006576.10|solute carrier family 4 (anion exchanger), member 3
mm10_v2_chr5_+_109996506_109996542	0.0956336	Sox6_Sox9	ENSMUST00000112540.1|Zfp932|ENSMUSG00000066613.8|zinc finger protein 932 	ENSMUST00000099484.2|Zfp932|ENSMUSG00000066613.8|zinc finger protein 932 	ENSMUST00000125213.1|Zfp932|ENSMUSG00000066613.8|zinc finger protein 932 	ENSMUST00000143639.1|Zfp932|ENSMUSG00000066613.8|zinc finger protein 932
mm10_v2_chr17_+_78491549_78491565	0.095115	Sox6_Sox9	ENSMUST00000079363.4|Gm10093|ENSMUSG00000061062.4|predicted pseudogene 10093
mm10_v2_chr7_-_46179929_46180033	0.0942353	Sox6_Sox9	ENSMUST00000033123.6|Abcc8|ENSMUSG00000040136.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
mm10_v2_chr4_+_42158092_42158092	0.0929132	Sox6_Sox9	ENSMUST00000098122.2|Gm13306|ENSMUSG00000073877.4|predicted gene 13306
mm10_v2_chr11_+_121237216_121237289	0.092121	Sox6_Sox9	ENSMUST00000103015.3|Narf|ENSMUSG00000000056.7|nuclear prelamin A recognition factor
mm10_v2_chr16_-_4213404_4213404	0.0916771	Sox6_Sox9	ENSMUST00000023165.6|Crebbp|ENSMUSG00000022521.8|CREB binding protein
mm10_v2_chr14_+_53704007_53704007	0.0901579	Sox6_Sox9	ENSMUST00000103664.4|Trav5-4|ENSMUSG00000095607.2|T cell receptor alpha variable 5-4
mm10_v2_chrX_+_57053549_57053615	0.0888322	Sox6_Sox9	ENSMUST00000114751.2|Htatsf1|ENSMUSG00000067873.5|HIV TAT specific factor 1 	ENSMUST00000088652.5|Htatsf1|ENSMUSG00000067873.5|HIV TAT specific factor 1
mm10_v2_chr2_+_32151074_32151262	0.087714	Sox6_Sox9	ENSMUST00000036691.7|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B 	ENSMUST00000069817.8|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B
mm10_v2_chr2_+_104590453_104590533	0.0861692	Sox6_Sox9	ENSMUST00000028599.7|Cstf3|ENSMUSG00000027176.8|cleavage stimulation factor, 3' pre-RNA, subunit 3
mm10_v2_chr2_+_105682463_105682547	0.0860082	Sox6_Sox9	ENSMUST00000140173.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000135412.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000138365.1|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000145744.1|Pax6|ENSMUSG00000027168.15|paired box gene 6
mm10_v2_chr16_+_4036942_4037103	0.085698	Sox6_Sox9	ENSMUST00000137748.1|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I 	ENSMUST00000006136.4|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I 	ENSMUST00000157044.1|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I 	ENSMUST00000120009.1|Dnase1|ENSMUSG00000005980.9|deoxyribonuclease I
mm10_v2_chr8_+_69822429_69822592	0.0856767	Sox6_Sox9	ENSMUST00000164890.1|Lpar2|ENSMUSG00000031861.9|lysophosphatidic acid receptor 2 	ENSMUST00000034325.4|Lpar2|ENSMUSG00000031861.9|lysophosphatidic acid receptor 2
mm10_v2_chr1_+_174136746_174136746	0.0853399	Sox6_Sox9	ENSMUST00000053941.3|Olfr424|ENSMUSG00000051528.3|olfactory receptor 424
mm10_v2_chr13_-_104816908_104816953	0.0832902	Sox6_Sox9	ENSMUST00000022228.6|Cwc27|ENSMUSG00000021715.6|CWC27 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr19_-_46962301_46962351	0.0826415	Sox6_Sox9	ENSMUST00000168536.1|Nt5c2|ENSMUSG00000025041.10|5'-nucleotidase, cytosolic II
mm10_v2_chr1_+_39900883_39900963	0.0825476	Sox6_Sox9	ENSMUST00000163854.2|Map4k4|ENSMUSG00000026074.8|mitogen-activated protein kinase kinase kinase kinase 4 	ENSMUST00000168431.1|Map4k4|ENSMUSG00000026074.8|mitogen-activated protein kinase kinase kinase kinase 4
mm10_v2_chr2_-_168207063_168207142	0.080668	Sox6_Sox9	ENSMUST00000088001.5|Adnp|ENSMUSG00000051149.9|activity-dependent neuroprotective protein
mm10_v2_chr1_+_176814660_176814660	0.0798025	Sox6_Sox9	ENSMUST00000056773.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8 	ENSMUST00000027785.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8
mm10_v2_chr3_-_150073620_150073620	0.078182	Sox6_Sox9	ENSMUST00000057740.5|Rpsa-ps10|ENSMUSG00000047676.5|ribosomal protein SA, pseudogene 10
mm10_v2_chr14_+_54431597_54431673	0.0778894	Sox6_Sox9	ENSMUST00000089688.4|Mmp14|ENSMUSG00000000957.8|matrix metallopeptidase 14 (membrane-inserted)
mm10_v2_chr6_+_57702601_57702658	0.0771582	Sox6_Sox9	ENSMUST00000072954.1|Lancl2|ENSMUSG00000062190.6|LanC (bacterial lantibiotic synthetase component C)-like 2 	ENSMUST00000050077.8|Lancl2|ENSMUSG00000062190.6|LanC (bacterial lantibiotic synthetase component C)-like 2
mm10_v2_chr1_+_153665274_153665325	0.0767703	Sox6_Sox9	ENSMUST00000152114.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8 	ENSMUST00000111812.1|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr19_-_24477356_24477490	0.0757769	Sox6_Sox9	ENSMUST00000099556.1|Fam122a|ENSMUSG00000074922.1|family with sequence similarity 122, member A
mm10_v2_chr10_+_110745433_110745572	0.0747424	Sox6_Sox9	ENSMUST00000174857.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000073781.5|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000173471.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000173634.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7
mm10_v2_chr19_+_29410919_29410981	0.0739392	Sox6_Sox9	ENSMUST00000112576.2|Pdcd1lg2|ENSMUSG00000016498.9|programmed cell death 1 ligand 2
mm10_v2_chr19_-_53589067_53589067	0.0732417	Sox6_Sox9	ENSMUST00000095978.3|Nutf2-ps1|ENSMUSG00000071497.3|nuclear transport factor 2, pseudogene 1
mm10_v2_chr6_-_99726392_99726414	0.0722189	Sox6_Sox9	ENSMUST00000032152.8|Prok2|ENSMUSG00000030069.9|prokineticin 2 	ENSMUST00000101120.4|Prok2|ENSMUSG00000030069.9|prokineticin 2 	ENSMUST00000008273.6|Prok2|ENSMUSG00000030069.9|prokineticin 2
mm10_v2_chr17_-_34121944_34121988	0.0715532	Sox6_Sox9	ENSMUST00000151986.1|Brd2|ENSMUSG00000024335.13|bromodomain containing 2
mm10_v2_chr11_-_76217490_76217664	0.0704184	Sox6_Sox9	ENSMUST00000102500.4|Gemin4|ENSMUSG00000049396.6|gem (nuclear organelle) associated protein 4
mm10_v2_chr10_-_59441748_59441782	0.0702125	Sox6_Sox9	ENSMUST00000009798.4|Oit3|ENSMUSG00000009654.4|oncoprotein induced transcript 3
mm10_v2_chr15_-_102722120_102722137	0.0701322	Sox6_Sox9	ENSMUST00000171838.1|Calcoco1|ENSMUSG00000023055.3|calcium binding and coiled coil domain 1
mm10_v2_chr19_+_3767953_3768033	0.0698588	Sox6_Sox9	ENSMUST00000113970.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr2_-_11502025_11502049	0.0689393	Sox6_Sox9	ENSMUST00000114846.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr9_-_72111651_72111712	0.0681836	Sox6_Sox9	ENSMUST00000185117.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr7_+_116093296_116093329	0.0681541	Sox6_Sox9	ENSMUST00000032899.5|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene
mm10_v2_chr3_+_31902666_31902703	0.0671372	Sox6_Sox9	ENSMUST00000119970.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2 	ENSMUST00000178668.1|Kcnmb2|ENSMUSG00000037610.9|potassium large conductance calcium-activated channel, subfamily M, beta member 2
mm10_v2_chr1_-_93101854_93101879	0.0667925	Sox6_Sox9	ENSMUST00000171796.1|Kif1a|ENSMUSG00000014602.9|kinesin family member 1A 	ENSMUST00000171556.1|Kif1a|ENSMUSG00000014602.9|kinesin family member 1A
mm10_v2_chr3_+_90476121_90476220	0.0664336	Sox6_Sox9	ENSMUST00000001042.8|Ilf2|ENSMUSG00000001016.8|interleukin enhancer binding factor 2
mm10_v2_chr8_+_120488416_120488490	0.0656295	Sox6_Sox9	ENSMUST00000034279.9|Gse1|ENSMUSG00000031822.12|genetic suppressor element 1
mm10_v2_chr17_+_35000987_35001097	0.0654307	Sox6_Sox9	ENSMUST00000087315.7|Vars|ENSMUSG00000007029.10|valyl-tRNA synthetase 	ENSMUST00000173584.1|Vars|ENSMUSG00000007029.10|valyl-tRNA synthetase
mm10_v2_chr9_-_79718518_79718592	0.0644398	Sox6_Sox9	ENSMUST00000071750.6|Col12a1|ENSMUSG00000032332.11|collagen, type XII, alpha 1
mm10_v2_chr5_-_109691041_109691041	0.0643526	Sox6_Sox9	ENSMUST00000092720.3|5430403G16Rik|ENSMUSG00000072763.2|RIKEN cDNA 5430403G16 gene
mm10_v2_chr4_+_42655251_42655251	0.0641989	Sox6_Sox9	ENSMUST00000177785.1|Ccl27b|ENSMUSG00000096826.1|chemokine (C-C motif) ligand 27b
mm10_v2_chr16_+_25801907_25801928	0.0633616	Sox6_Sox9	ENSMUST00000040231.6|Trp63|ENSMUSG00000022510.8|transformation related protein 63 	ENSMUST00000115306.1|Trp63|ENSMUSG00000022510.8|transformation related protein 63 	ENSMUST00000115304.1|Trp63|ENSMUSG00000022510.8|transformation related protein 63 	ENSMUST00000115305.1|Trp63|ENSMUSG00000022510.8|transformation related protein 63
mm10_v2_chr10_+_53596936_53597004	0.0632295	Sox6_Sox9	ENSMUST00000020004.6|Asf1a|ENSMUSG00000019857.6|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
mm10_v2_chr12_+_29938036_29938059	0.061441	Sox6_Sox9	ENSMUST00000122328.1|Pxdn|ENSMUSG00000020674.10|peroxidasin homolog (Drosophila) 	ENSMUST00000118321.1|Pxdn|ENSMUSG00000020674.10|peroxidasin homolog (Drosophila)
mm10_v2_chr13_+_80886095_80886201	0.0601131	Sox6_Sox9	ENSMUST00000161441.1|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr11_-_102447647_102447682	0.0569974	Sox6_Sox9	ENSMUST00000049057.4|Fam171a2|ENSMUSG00000034685.4|family with sequence similarity 171, member A2
mm10_v2_chr10_+_112083345_112083371	0.053272	Sox6_Sox9	ENSMUST00000148897.1|Glipr1l2|ENSMUSG00000020214.4|GLI pathogenesis-related 1 like 2 	ENSMUST00000020434.3|Glipr1l2|ENSMUSG00000020214.4|GLI pathogenesis-related 1 like 2
mm10_v2_chr1_-_135375233_135375245	0.0530339	Sox6_Sox9	ENSMUST00000041240.3|Shisa4|ENSMUSG00000041889.7|shisa homolog 4 (Xenopus laevis)
mm10_v2_chr14_+_27039001_27039050	0.0501837	Sox6_Sox9	ENSMUST00000035336.3|Il17rd|ENSMUSG00000040717.5|interleukin 17 receptor D
mm10_v2_chr12_+_52699297_52699411	0.0491169	Sox6_Sox9	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr4_+_94739276_94739300	0.0485901	Sox6_Sox9	ENSMUST00000073939.6|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase 	ENSMUST00000102798.1|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase
mm10_v2_chr9_-_72111755_72111821	0.0474049	Sox6_Sox9	ENSMUST00000183492.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184523.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000034755.6|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr5_-_8622855_8622952	0.0452973	Sox6_Sox9	ENSMUST00000047485.8|Rundc3b|ENSMUSG00000040570.8|RUN domain containing 3B 	ENSMUST00000115378.1|Rundc3b|ENSMUSG00000040570.8|RUN domain containing 3B
mm10_v2_chr13_+_23011249_23011249	0.0441023	Sox6_Sox9	ENSMUST00000076897.1|Vmn1r213|ENSMUSG00000060024.1|vomeronasal 1 receptor 213
mm10_v2_chr2_-_30903255_30903297	0.0435144	Sox6_Sox9	ENSMUST00000102852.3|Ptges|ENSMUSG00000050737.11|prostaglandin E synthase
mm10_v2_chr18_+_44104407_44104481	0.0434776	Sox6_Sox9	ENSMUST00000081271.5|Spink12|ENSMUSG00000061144.5|serine peptidase inhibitor, Kazal type 11
mm10_v2_chr8_+_57320975_57320992	0.041835	Sox6_Sox9	ENSMUST00000040104.3|Hand2|ENSMUSG00000038193.3|heart and neural crest derivatives expressed transcript 2
mm10_v2_chr11_-_78497734_78497793	0.0415905	Sox6_Sox9	ENSMUST00000061174.6|Sarm1|ENSMUSG00000050132.7|sterile alpha and HEAT/Armadillo motif containing 1
mm10_v2_chrX_-_104201126_104201185	0.0407658	Sox6_Sox9	ENSMUST00000056502.6|C77370|ENSMUSG00000046449.9|expressed sequence C77370 	ENSMUST00000118314.1|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chr18_+_37477768_37477835	0.0396449	Sox6_Sox9	ENSMUST00000051442.5|Pcdhb16|ENSMUSG00000047910.5|protocadherin beta 16
mm10_v2_chr2_-_161109017_161109027	0.0395201	Sox6_Sox9	ENSMUST00000039782.7|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6 	ENSMUST00000134178.1|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6
mm10_v2_chr4_-_133753611_133753666	0.0392567	Sox6_Sox9	ENSMUST00000145664.2|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like) 	ENSMUST00000105897.3|Arid1a|ENSMUSG00000007880.10|AT rich interactive domain 1A (SWI-like)
mm10_v2_chr2_+_3114220_3114225	0.0383477	Sox6_Sox9	ENSMUST00000072955.5|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr4_+_94739518_94739537	0.037866	Sox6_Sox9	ENSMUST00000071168.5|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase
mm10_v2_chr7_+_24507099_24507110	0.0364338	Sox6_Sox9	ENSMUST00000177228.1|Zfp428|ENSMUSG00000064264.8|zinc finger protein 428
mm10_v2_chr10_-_117063764_117063814	0.0361912	Sox6_Sox9	ENSMUST00000047672.7|Cct2|ENSMUSG00000034024.7|chaperonin containing Tcp1, subunit 2 (beta)
mm10_v2_chr3_-_95891938_95892005	0.0358534	Sox6_Sox9	ENSMUST00000036360.6|BC028528|ENSMUSG00000038543.7|cDNA sequence BC028528 	ENSMUST00000090476.3|BC028528|ENSMUSG00000038543.7|cDNA sequence BC028528
mm10_v2_chr7_-_4514558_4514574	0.0357228	Sox6_Sox9	ENSMUST00000163538.1|Tnnt1|ENSMUSG00000064179.7|troponin T1, skeletal, slow
mm10_v2_chr3_-_116808166_116808198	0.0342814	Sox6_Sox9	ENSMUST00000040603.7|Agl|ENSMUSG00000033400.8|amylo-1,6-glucosidase, 4-alpha-glucanotransferase
mm10_v2_chr13_-_22035589_22035643	0.0334832	Sox6_Sox9	ENSMUST00000091742.4|Hist1h2ah|ENSMUSG00000069302.4|histone cluster 1, H2ah
mm10_v2_chr2_+_37516618_37516634	0.0333556	Sox6_Sox9	ENSMUST00000065441.6|Gpr21|ENSMUSG00000053164.6|G protein-coupled receptor 21
mm10_v2_chr13_+_23746734_23746763	0.0327576	Sox6_Sox9	ENSMUST00000099703.2|Hist1h2bb|ENSMUSG00000075031.2|histone cluster 1, H2bb
mm10_v2_chr14_+_62837679_62837726	0.0327556	Sox6_Sox9	ENSMUST00000014691.8|Wdfy2|ENSMUSG00000014547.9|WD repeat and FYVE domain containing 2
mm10_v2_chr7_+_116093336_116093372	0.031795	Sox6_Sox9	ENSMUST00000106608.1|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene 	ENSMUST00000106607.1|1110004F10Rik|ENSMUSG00000030663.6|RIKEN cDNA 1110004F10 gene
mm10_v2_chr18_+_65698253_65698277	0.0317537	Sox6_Sox9	ENSMUST00000115097.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like 	ENSMUST00000117694.1|Oacyl|ENSMUSG00000046610.8|O-acyltransferase like
mm10_v2_chr18_-_24020749_24020813	0.031242	Sox6_Sox9	ENSMUST00000066497.5|Zfp191|ENSMUSG00000051469.8|zinc finger protein 191
mm10_v2_chr4_-_99120898_99120935	0.031106	Sox6_Sox9	ENSMUST00000075836.5|Dock7|ENSMUSG00000028556.9|dedicator of cytokinesis 7
mm10_v2_chr7_-_4514368_4514483	0.0307346	Sox6_Sox9	ENSMUST00000166161.1|Tnnt1|ENSMUSG00000064179.7|troponin T1, skeletal, slow
mm10_v2_chr5_+_64230285_64230312	0.0258409	Sox6_Sox9	ENSMUST00000119756.1|Tbc1d1|ENSMUSG00000029174.12|TBC1 domain family, member 1
mm10_v2_chr15_+_39745926_39745937	0.0242591	Sox6_Sox9	ENSMUST00000022913.4|Dcstamp|ENSMUSG00000022303.8|dentrocyte expressed seven transmembrane protein
mm10_v2_chr14_-_20618339_20618365	0.0229261	Sox6_Sox9	ENSMUST00000035340.7|Usp54|ENSMUSG00000034235.10|ubiquitin specific peptidase 54
mm10_v2_chr15_-_102722150_102722178	0.0222684	Sox6_Sox9	ENSMUST00000023818.3|Calcoco1|ENSMUSG00000023055.3|calcium binding and coiled coil domain 1
mm10_v2_chr4_-_135272798_135272819	0.0217249	Sox6_Sox9	ENSMUST00000037099.8|Clic4|ENSMUSG00000037242.8|chloride intracellular channel 4 (mitochondrial)
mm10_v2_chr5_-_142550965_142551110	0.0212686	Sox6_Sox9	ENSMUST00000129212.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000110785.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000063635.8|Radil|ENSMUSG00000029576.11|Ras association and DIL domains
mm10_v2_chr14_-_26638183_26638183	0.0210519	Sox6_Sox9	ENSMUST00000166902.1|4930570N19Rik|ENSMUSG00000090861.1|RIKEN cDNA 4930570N19 gene
mm10_v2_chr6_+_113307160_113307230	0.0199219	Sox6_Sox9	ENSMUST00000113122.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1 	ENSMUST00000113119.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1 	ENSMUST00000113121.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1 	ENSMUST00000113117.1|Brpf1|ENSMUSG00000001632.10|bromodomain and PHD finger containing, 1
mm10_v2_chr17_-_27622785_27622964	0.0194866	Sox6_Sox9	ENSMUST00000176458.1|Nudt3|ENSMUSG00000024213.7|nudix (nucleotide diphosphate linked moiety X)-type motif 3 	ENSMUST00000114886.1|Nudt3|ENSMUSG00000024213.7|nudix (nucleotide diphosphate linked moiety X)-type motif 3
mm10_v2_chr9_-_7835255_7835255	0.0188675	Sox6_Sox9	ENSMUST00000074246.6|Birc2|ENSMUSG00000057367.6|baculoviral IAP repeat-containing 2
mm10_v2_chr3_-_123690806_123690847	0.0184874	Sox6_Sox9	ENSMUST00000154668.1|Ndst3|ENSMUSG00000027977.9|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
mm10_v2_chr2_-_104816696_104816792	0.0183788	Sox6_Sox9	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr7_+_25681158_25681158	0.0174451	Sox6_Sox9	ENSMUST00000108403.3|B9d2|ENSMUSG00000063439.6|B9 protein domain 2
mm10_v2_chr18_+_37725706_37725754	0.0160408	Sox6_Sox9	ENSMUST00000066149.6|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr4_-_73950834_73950853	0.0121624	Sox6_Sox9	ENSMUST00000095023.1|2310002L09Rik|ENSMUSG00000028396.5|RIKEN cDNA 2310002L09 gene 	ENSMUST00000030101.3|2310002L09Rik|ENSMUSG00000028396.5|RIKEN cDNA 2310002L09 gene
mm10_v2_chr13_-_54687644_54687688	0.011688	Sox6_Sox9	ENSMUST00000129881.1|Rnf44|ENSMUSG00000034928.10|ring finger protein 44
mm10_v2_chr1_+_187608755_187608791	0.0115374	Sox6_Sox9	ENSMUST00000127489.1|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr5_-_23616528_23616597	0.00999772	Sox6_Sox9	ENSMUST00000088392.4|Srpk2|ENSMUSG00000062604.7|serine/arginine-rich protein specific kinase 2
mm10_v2_chr4_+_130663321_130663412	0.0098496	Sox6_Sox9	ENSMUST00000030315.6|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000105992.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000105991.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000143277.1|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000097864.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000097862.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila)
mm10_v2_chr18_+_37489465_37489465	0.00984759	Sox6_Sox9	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr4_+_43875524_43875558	0.00825686	Sox6_Sox9	ENSMUST00000030198.6|Reck|ENSMUSG00000028476.7|reversion-inducing-cysteine-rich protein with kazal motifs
mm10_v2_chr1_+_159232299_159232326	0.00802812	Sox6_Sox9	ENSMUST00000076894.5|Rfwd2|ENSMUSG00000040782.7|ring finger and WD repeat domain 2
mm10_v2_chr2_-_65567465_65567495	0.00779129	Sox6_Sox9	ENSMUST00000066432.5|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chr13_+_65278810_65278838	0.0073864	Sox6_Sox9	ENSMUST00000126879.1|Zfp369|ENSMUSG00000021514.11|zinc finger protein 369 	ENSMUST00000130799.1|Zfp369|ENSMUSG00000021514.11|zinc finger protein 369
mm10_v2_chr12_+_69296676_69296798	0.0068243	Sox6_Sox9	ENSMUST00000021362.4|Klhdc2|ENSMUSG00000020978.4|kelch domain containing 2
mm10_v2_chr15_-_76374926_76374942	0.00658362	Sox6_Sox9	ENSMUST00000071119.6|Tssk5|ENSMUSG00000060794.6|testis-specific serine kinase 5
mm10_v2_chr9_+_104547267_104547295	0.00553727	Sox6_Sox9	ENSMUST00000098443.2|Cpne4|ENSMUSG00000032564.9|copine IV
mm10_v2_chr10_+_11609256_11609269	0.00387514	Sox6_Sox9	ENSMUST00000052902.7|Gm9797|ENSMUSG00000045455.7|predicted pseudogene 9797
mm10_v2_chr10_+_123264076_123264125	0.00320593	Sox6_Sox9	ENSMUST00000050756.7|Fam19a2|ENSMUSG00000044071.7|family with sequence similarity 19, member A2
mm10_v2_chr2_+_25180737_25180764	0.00317069	Sox6_Sox9	ENSMUST00000104999.2|Nrarp|ENSMUSG00000078202.2|Notch-regulated ankyrin repeat protein
mm10_v2_chr16_-_90284412_90284498	0.00205553	Sox6_Sox9	ENSMUST00000039280.7|Scaf4|ENSMUSG00000022983.9|SR-related CTD-associated factor 4
mm10_v2_chr15_-_88978958_88979007	0.00131798	Sox6_Sox9	ENSMUST00000042594.6|Mlc1|ENSMUSG00000035805.7|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human) 	ENSMUST00000109368.1|Mlc1|ENSMUSG00000035805.7|megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human)
mm10_v2_chr14_+_75136326_75136346	0.0012293	Sox6_Sox9	ENSMUST00000145303.1|Lcp1|ENSMUSG00000021998.10|lymphocyte cytosolic protein 1
mm10_v2_chr19_+_40831248_40831292	0.00026621	Sox6_Sox9	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
