mm10_v2_chr5_+_137288273_137288292	4.1747	Smad4	ENSMUST00000024099.4|Ache|ENSMUSG00000023328.8|acetylcholinesterase 	ENSMUST00000085934.3|Ache|ENSMUSG00000023328.8|acetylcholinesterase
mm10_v2_chrX_+_136270253_136270269	3.85135	Smad4	ENSMUST00000178632.1|Ngfrap1|ENSMUSG00000046432.6|nerve growth factor receptor (TNFRSF16) associated protein 1 	ENSMUST00000053540.4|Ngfrap1|ENSMUSG00000046432.6|nerve growth factor receptor (TNFRSF16) associated protein 1
mm10_v2_chr4_-_119189949_119189964	3.578	Smad4	ENSMUST00000124626.1|Ermap|ENSMUSG00000028644.10|erythroblast membrane-associated protein
mm10_v2_chrX_+_136270302_136270352	3.12196	Smad4	ENSMUST00000113112.1|Ngfrap1|ENSMUSG00000046432.6|nerve growth factor receptor (TNFRSF16) associated protein 1
mm10_v2_chr4_-_134254076_134254128	2.65211	Smad4	ENSMUST00000060050.5|Grrp1|ENSMUSG00000050105.5|glycine/arginine rich protein 1
mm10_v2_chr11_-_33147400_33147448	2.46199	Smad4	ENSMUST00000020507.7|Fgf18|ENSMUSG00000057967.6|fibroblast growth factor 18
mm10_v2_chr4_-_119190005_119190016	2.35828	Smad4	ENSMUST00000138395.1|Ermap|ENSMUSG00000028644.10|erythroblast membrane-associated protein 	ENSMUST00000156746.1|Ermap|ENSMUSG00000028644.10|erythroblast membrane-associated protein
mm10_v2_chr7_+_45216671_45216695	2.33287	Smad4	ENSMUST00000134420.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2
mm10_v2_chr4_-_117178726_117178754	2.29246	Smad4	ENSMUST00000153953.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C 	ENSMUST00000106436.1|Kif2c|ENSMUSG00000028678.7|kinesin family member 2C
mm10_v2_chr17_-_32403551_32403590	2.20469	Smad4	ENSMUST00000135618.1|Rasal3|ENSMUSG00000052142.9|RAS protein activator like 3 	ENSMUST00000063824.7|Rasal3|ENSMUSG00000052142.9|RAS protein activator like 3
mm10_v2_chr7_+_45215753_45215852	1.95018	Smad4	ENSMUST00000033060.6|Tead2|ENSMUSG00000030796.9|TEA domain family member 2 	ENSMUST00000155313.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2 	ENSMUST00000107801.1|Tead2|ENSMUSG00000030796.9|TEA domain family member 2
mm10_v2_chr7_+_24862193_24862213	1.88838	Smad4	ENSMUST00000052897.4|Gm9844|ENSMUSG00000050347.5|predicted pseudogene 9844 	ENSMUST00000170837.2|Gm9844|ENSMUSG00000091955.2|predicted pseudogene 9844
mm10_v2_chr7_-_100855403_100855440	1.84935	Smad4	ENSMUST00000156855.1|Relt|ENSMUSG00000008318.3|RELT tumor necrosis factor receptor
mm10_v2_chr14_-_57826128_57826180	1.84293	Smad4	ENSMUST00000022536.2|Ska3|ENSMUSG00000021965.2|spindle and kinetochore associated complex subunit 3
mm10_v2_chr17_+_32403006_32403006	1.83123	Smad4	ENSMUST00000065921.5|A530088E08Rik|ENSMUSG00000053467.5|RIKEN cDNA A530088E08 gene
mm10_v2_chr17_-_32403526_32403537	1.7698	Smad4	ENSMUST00000137458.1|Rasal3|ENSMUSG00000052142.9|RAS protein activator like 3
mm10_v2_chr7_+_117380937_117380992	1.74406	Smad4	ENSMUST00000032892.5|Xylt1|ENSMUSG00000030657.5|xylosyltransferase 1
mm10_v2_chr15_-_103252810_103252829	1.72397	Smad4	ENSMUST00000154510.1|Nfe2|ENSMUSG00000058794.6|nuclear factor, erythroid derived 2
mm10_v2_chr11_-_3504766_3504833	1.69923	Smad4	ENSMUST00000044507.5|Inpp5j|ENSMUSG00000034570.6|inositol polyphosphate 5-phosphatase J
mm10_v2_chr15_+_39076885_39076938	1.67874	Smad4	ENSMUST00000067072.3|Cthrc1|ENSMUSG00000054196.6|collagen triple helix repeat containing 1
mm10_v2_chr12_-_109600328_109600348	1.53664	Smad4	ENSMUST00000149046.2|Rtl1|ENSMUSG00000085925.2|retrotransposon-like 1
mm10_v2_chr1_-_45503282_45503282	1.49572	Smad4	ENSMUST00000086430.4|Col5a2|ENSMUSG00000026042.10|collagen, type V, alpha 2
mm10_v2_chr13_-_23551648_23551672	1.4626	Smad4	ENSMUST00000102971.1|Hist1h4f|ENSMUSG00000069274.3|histone cluster 1, H4f
mm10_v2_chr17_+_34597852_34597894	1.41577	Smad4	ENSMUST00000174496.2|Ager|ENSMUSG00000015452.8|advanced glycosylation end product-specific receptor 	ENSMUST00000015596.3|Ager|ENSMUSG00000015452.8|advanced glycosylation end product-specific receptor 	ENSMUST00000173992.1|Ager|ENSMUSG00000015452.8|advanced glycosylation end product-specific receptor
mm10_v2_chr2_+_120476911_120476976	1.39042	Smad4	ENSMUST00000110716.1|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000028748.6|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000090028.5|Capn3|ENSMUSG00000079110.5|calpain 3 	ENSMUST00000110719.2|Capn3|ENSMUSG00000079110.5|calpain 3
mm10_v2_chr2_+_29869484_29869544	1.34616	Smad4	ENSMUST00000047521.6|Cercam|ENSMUSG00000039787.7|cerebral endothelial cell adhesion molecule 	ENSMUST00000134152.1|Cercam|ENSMUSG00000039787.7|cerebral endothelial cell adhesion molecule
mm10_v2_chr1_+_87470258_87470281	1.33262	Smad4	ENSMUST00000027476.4|3110079O15Rik|ENSMUSG00000026258.4|RIKEN cDNA 3110079O15 gene
mm10_v2_chr13_-_22042949_22042978	1.25328	Smad4	ENSMUST00000091741.4|Hist1h2ag|ENSMUSG00000069301.4|histone cluster 1, H2ag
mm10_v2_chr17_-_29888570_29888629	1.24077	Smad4	ENSMUST00000171691.1|Mdga1|ENSMUSG00000043557.9|MAM domain containing glycosylphosphatidylinositol anchor 1
mm10_v2_chr13_+_22043189_22043214	1.22202	Smad4	ENSMUST00000110452.1|Hist1h2bj|ENSMUSG00000069300.3|histone cluster 1, H2bj
mm10_v2_chr6_+_147032528_147032547	1.21269	Smad4	ENSMUST00000036194.4|Rep15|ENSMUSG00000040121.4|RAB15 effector protein
mm10_v2_chr11_-_106160101_106160168	1.20758	Smad4	ENSMUST00000045923.3|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr14_+_54640952_54640952	1.19523	Smad4	ENSMUST00000169818.2|Gm17606|ENSMUSG00000091306.2|predicted gene, 17606
mm10_v2_chr15_-_27681498_27681554	1.16704	Smad4	ENSMUST00000100739.3|Fam105a|ENSMUSG00000056069.8|family with sequence similarity 105, member A
mm10_v2_chr9_-_45936049_45936106	1.15329	Smad4	ENSMUST00000034590.2|Tagln|ENSMUSG00000032085.4|transgelin
mm10_v2_chr5_-_137741102_137741185	1.1193	Smad4	ENSMUST00000149512.1|Nyap1|ENSMUSG00000045348.9|neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1
mm10_v2_chr4_+_130055010_130055047	1.11764	Smad4	ENSMUST00000123617.1|Col16a1|ENSMUSG00000040690.9|collagen, type XVI, alpha 1
mm10_v2_chr17_-_28486082_28486149	1.09982	Smad4	ENSMUST00000079413.3|Fkbp5|ENSMUSG00000024222.10|FK506 binding protein 5
mm10_v2_chr9_-_49798905_49798931	1.09403	Smad4	ENSMUST00000114476.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr18_-_52529847_52529890	1.07662	Smad4	ENSMUST00000171470.1|Lox|ENSMUSG00000024529.7|lysyl oxidase
mm10_v2_chr9_-_14381242_14381242	1.06701	Smad4	ENSMUST00000167549.1|Endod1|ENSMUSG00000037419.8|endonuclease domain containing 1
mm10_v2_chr15_+_81936753_81936839	1.04322	Smad4	ENSMUST00000038757.7|Csdc2|ENSMUSG00000042109.7|cold shock domain containing C2, RNA binding
mm10_v2_chr6_-_72958097_72958302	1.03309	Smad4	ENSMUST00000114049.1|Tmsb10|ENSMUSG00000079523.2|thymosin, beta 10
mm10_v2_chr8_-_92356103_92356120	1.0096	Smad4	ENSMUST00000034183.3|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene
mm10_v2_chr6_+_120093348_120093359	1.00373	Smad4	ENSMUST00000112711.2|Ninj2|ENSMUSG00000041377.6|ninjurin 2
mm10_v2_chr18_-_52529692_52529709	1.00262	Smad4	ENSMUST00000025409.7|Lox|ENSMUSG00000024529.7|lysyl oxidase
mm10_v2_chr7_-_27181149_27181162	0.989915	Smad4	ENSMUST00000071986.6|Mia|ENSMUSG00000089661.3|melanoma inhibitory activity 	ENSMUST00000121848.1|Mia|ENSMUSG00000089661.3|melanoma inhibitory activity
mm10_v2_chr2_-_29869785_29869785	0.988695	Smad4	ENSMUST00000047607.1|2600006K01Rik|ENSMUSG00000039798.1|RIKEN cDNA 2600006K01 gene
mm10_v2_chr11_-_26591729_26591729	0.987674	Smad4	ENSMUST00000109504.1|Vrk2|ENSMUSG00000064090.8|vaccinia related kinase 2
mm10_v2_chrX_-_150812932_150813154	0.963318	Smad4	ENSMUST00000131241.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000147152.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2 	ENSMUST00000143843.1|Maged2|ENSMUSG00000025268.9|melanoma antigen, family D, 2
mm10_v2_chr6_-_72958465_72958496	0.963044	Smad4	ENSMUST00000114050.1|Tmsb10|ENSMUSG00000079523.2|thymosin, beta 10
mm10_v2_chr7_-_45052865_45052914	0.909973	Smad4	ENSMUST00000057293.6|Prr12|ENSMUSG00000046574.7|proline rich 12
mm10_v2_chr11_-_106159902_106159927	0.892316	Smad4	ENSMUST00000064545.4|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr7_-_45870928_45870986	0.885996	Smad4	ENSMUST00000146672.1|Grin2d|ENSMUSG00000002771.10|glutamate receptor, ionotropic, NMDA2D (epsilon 4)
mm10_v2_chr7_-_45239041_45239066	0.879718	Smad4	ENSMUST00000131290.1|Cd37|ENSMUSG00000030798.7|CD37 antigen
mm10_v2_chr15_+_81936911_81936982	0.879047	Smad4	ENSMUST00000135663.1|Csdc2|ENSMUSG00000042109.7|cold shock domain containing C2, RNA binding
mm10_v2_chr3_+_88607742_88607791	0.872508	Smad4	ENSMUST00000175903.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr17_+_75178911_75178961	0.863938	Smad4	ENSMUST00000112514.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr17_+_75178797_75178824	0.862829	Smad4	ENSMUST00000112516.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1 	ENSMUST00000135447.1|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chrX_+_10485121_10485163	0.855605	Smad4	ENSMUST00000076354.6|Tspan7|ENSMUSG00000058254.6|tetraspanin 7 	ENSMUST00000115526.1|Tspan7|ENSMUSG00000058254.6|tetraspanin 7
mm10_v2_chr1_-_133801031_133801041	0.854343	Smad4	ENSMUST00000143567.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr11_-_106160708_106160860	0.84564	Smad4	ENSMUST00000106875.1|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr9_-_49798729_49798855	0.842666	Smad4	ENSMUST00000166811.2|Ncam1|ENSMUSG00000039542.9|neural cell adhesion molecule 1
mm10_v2_chr11_+_69846610_69846659	0.828511	Smad4	ENSMUST00000152566.1|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3 	ENSMUST00000108633.2|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3
mm10_v2_chr6_-_129275360_129275376	0.827881	Smad4	ENSMUST00000032259.3|Cd69|ENSMUSG00000030156.3|CD69 antigen
mm10_v2_chr7_-_45238794_45238874	0.818872	Smad4	ENSMUST00000098461.1|Cd37|ENSMUSG00000030798.7|CD37 antigen 	ENSMUST00000107797.1|Cd37|ENSMUSG00000030798.7|CD37 antigen
mm10_v2_chr13_-_21832194_21832198	0.798216	Smad4	ENSMUST00000102979.1|Hist1h4n|ENSMUSG00000069305.3|histone cluster 1, H4n
mm10_v2_chrX_+_159708593_159708612	0.786152	Smad4	ENSMUST00000080394.6|Sh3kbp1|ENSMUSG00000040990.11|SH3-domain kinase binding protein 1
mm10_v2_chr11_+_69846665_69846681	0.783963	Smad4	ENSMUST00000019605.2|Plscr3|ENSMUSG00000019461.6|phospholipid scramblase 3
mm10_v2_chr3_-_102964124_102964137	0.77139	Smad4	ENSMUST00000058899.8|Nr1h5|ENSMUSG00000048938.8|nuclear receptor subfamily 1, group H, member 5
mm10_v2_chr11_+_59542748_59542775	0.763816	Smad4	ENSMUST00000149126.1|Nlrp3|ENSMUSG00000032691.8|NLR family, pyrin domain containing 3
mm10_v2_chrX_+_56779437_56779565	0.756169	Smad4	ENSMUST00000114773.3|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr10_-_91082704_91082773	0.742554	Smad4	ENSMUST00000162618.1|Apaf1|ENSMUSG00000019979.6|apoptotic peptidase activating factor 1 	ENSMUST00000020157.6|Apaf1|ENSMUSG00000019979.6|apoptotic peptidase activating factor 1 	ENSMUST00000160788.1|Apaf1|ENSMUSG00000019979.6|apoptotic peptidase activating factor 1
mm10_v2_chr11_-_95514570_95514707	0.731236	Smad4	ENSMUST00000058866.7|Nxph3|ENSMUSG00000046719.7|neurexophilin 3
mm10_v2_chr10_-_91082653_91082662	0.728581	Smad4	ENSMUST00000159110.1|Apaf1|ENSMUSG00000019979.6|apoptotic peptidase activating factor 1
mm10_v2_chr15_-_98728120_98728198	0.723992	Smad4	ENSMUST00000003445.6|Fkbp11|ENSMUSG00000003355.6|FK506 binding protein 11
mm10_v2_chr11_+_35121126_35121224	0.720758	Smad4	ENSMUST00000069837.3|Slit3|ENSMUSG00000056427.4|slit homolog 3 (Drosophila)
mm10_v2_chr19_-_31664356_31664372	0.716809	Smad4	ENSMUST00000073581.5|Prkg1|ENSMUSG00000052920.8|protein kinase, cGMP-dependent, type I
mm10_v2_chr4_-_148130678_148130706	0.714676	Smad4	ENSMUST00000030862.4|Draxin|ENSMUSG00000029005.4|dorsal inhibitory axon guidance protein
mm10_v2_chr5_+_19907502_19907551	0.711901	Smad4	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr3_+_68572245_68572392	0.688718	Smad4	ENSMUST00000170788.2|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr4_-_115781012_115781023	0.685914	Smad4	ENSMUST00000106521.1|Tex38|ENSMUSG00000044556.3|testis expressed 38
mm10_v2_chr12_-_100899436_100899524	0.681272	Smad4	ENSMUST00000053668.3|Gpr68|ENSMUSG00000047415.5|G protein-coupled receptor 68
mm10_v2_chr16_-_36642742_36642805	0.672077	Smad4	ENSMUST00000135280.1|Cd86|ENSMUSG00000022901.7|CD86 antigen
mm10_v2_chr15_-_98778150_98778150	0.666706	Smad4	ENSMUST00000023732.5|Wnt10b|ENSMUSG00000022996.8|wingless related MMTV integration site 10b
mm10_v2_chr14_+_53683593_53683647	0.662609	Smad4	ENSMUST00000103663.4|Trav4-4-dv10|ENSMUSG00000096096.2|T cell receptor alpha variable 4-4-DV10
mm10_v2_chr8_+_57332111_57332131	0.650496	Smad4	ENSMUST00000181638.1|5033428I22Rik|ENSMUSG00000097910.1|RIKEN cDNA 5033428I22 gene
mm10_v2_chr11_+_60699718_60699750	0.639643	Smad4	ENSMUST00000052346.3|Llgl1|ENSMUSG00000020536.6|lethal giant larvae homolog 1 (Drosophila)
mm10_v2_chr9_+_53771499_53771535	0.612017	Smad4	ENSMUST00000048670.8|Slc35f2|ENSMUSG00000042195.8|solute carrier family 35, member F2
mm10_v2_chr4_+_127172866_127172898	0.581112	Smad4	ENSMUST00000106094.2|Dlgap3|ENSMUSG00000042388.8|discs, large (Drosophila) homolog-associated protein 3
mm10_v2_chr11_+_60699758_60699845	0.579278	Smad4	ENSMUST00000108719.3|Llgl1|ENSMUSG00000020536.6|lethal giant larvae homolog 1 (Drosophila)
mm10_v2_chr5_-_92278155_92278171	0.536183	Smad4	ENSMUST00000159345.1|Naaa|ENSMUSG00000029413.8|N-acylethanolamine acid amidase 	ENSMUST00000113102.3|Naaa|ENSMUSG00000029413.8|N-acylethanolamine acid amidase
mm10_v2_chr4_-_148500449_148500466	0.53525	Smad4	ENSMUST00000030840.3|Angptl7|ENSMUSG00000028989.3|angiopoietin-like 7
mm10_v2_chr19_+_5740885_5740904	0.53318	Smad4	ENSMUST00000081496.5|Ltbp3|ENSMUSG00000024940.10|latent transforming growth factor beta binding protein 3
mm10_v2_chr15_-_98607611_98607638	0.510088	Smad4	ENSMUST00000096224.4|Adcy6|ENSMUSG00000022994.8|adenylate cyclase 6
mm10_v2_chr16_+_17898617_17898647	0.508861	Smad4	ENSMUST00000055374.6|Tssk2|ENSMUSG00000045521.6|testis-specific serine kinase 2
mm10_v2_chr15_-_103366763_103366798	0.489964	Smad4	ENSMUST00000023128.6|Itga5|ENSMUSG00000000555.6|integrin alpha 5 (fibronectin receptor alpha)
mm10_v2_chr6_-_52240841_52240854	0.489655	Smad4	ENSMUST00000121043.1|Hoxa10|ENSMUSG00000000938.11|homeobox A10
mm10_v2_chr2_-_93046053_93046172	0.488817	Smad4	ENSMUST00000111272.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11 	ENSMUST00000178666.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11 	ENSMUST00000147339.1|Prdm11|ENSMUSG00000075028.5|PR domain containing 11
mm10_v2_chr1_-_153186447_153186447	0.470832	Smad4	ENSMUST00000027753.6|Lamc2|ENSMUSG00000026479.7|laminin, gamma 2
mm10_v2_chr12_-_103338314_103338399	0.4654	Smad4	ENSMUST00000149431.1|Asb2|ENSMUSG00000021200.8|ankyrin repeat and SOCS box-containing 2
mm10_v2_chr17_+_72918298_72918316	0.459563	Smad4	ENSMUST00000024857.6|Lbh|ENSMUSG00000024063.6|limb-bud and heart
mm10_v2_chr9_+_57940104_57940120	0.455614	Smad4	ENSMUST00000043059.7|Sema7a|ENSMUSG00000038264.7|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm10_v2_chr11_-_116110211_116110259	0.425497	Smad4	ENSMUST00000106441.1|Trim47|ENSMUSG00000020773.5|tripartite motif-containing 47 	ENSMUST00000021120.5|Trim47|ENSMUSG00000020773.5|tripartite motif-containing 47
mm10_v2_chr9_+_44072196_44072211	0.423187	Smad4	ENSMUST00000176671.1|Usp2|ENSMUSG00000032010.8|ubiquitin specific peptidase 2
mm10_v2_chr9_+_106429537_106429548	0.415913	Smad4	ENSMUST00000059802.6|Rpl29|ENSMUSG00000048758.7|ribosomal protein L29
mm10_v2_chr6_-_112388013_112388037	0.412707	Smad4	ENSMUST00000060847.5|Ssu2|ENSMUSG00000034387.6|ssu-2 homolog (C. elegans)
mm10_v2_chr1_+_153652943_153653025	0.411986	Smad4	ENSMUST00000041776.5|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr1_+_171682004_171682071	0.408483	Smad4	ENSMUST00000015499.7|Cd48|ENSMUSG00000015355.7|CD48 antigen 	ENSMUST00000068584.5|Cd48|ENSMUSG00000015355.7|CD48 antigen
mm10_v2_chr11_-_69413675_69413675	0.393898	Smad4	ENSMUST00000094077.4|Kdm6b|ENSMUSG00000018476.7|KDM1 lysine (K)-specific demethylase 6B
mm10_v2_chrX_-_104201126_104201185	0.390212	Smad4	ENSMUST00000056502.6|C77370|ENSMUSG00000046449.9|expressed sequence C77370 	ENSMUST00000118314.1|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chrX_+_41401476_41401565	0.388605	Smad4	ENSMUST00000165288.1|Gria3|ENSMUSG00000001986.10|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm10_v2_chr11_+_115440540_115440554	0.383852	Smad4	ENSMUST00000093914.4|4933422H20Rik|ENSMUSG00000070332.4|RIKEN cDNA 4933422H20 gene
mm10_v2_chr11_+_4160348_4160404	0.38358	Smad4	ENSMUST00000002198.3|Sf3a1|ENSMUSG00000002129.5|splicing factor 3a, subunit 1
mm10_v2_chr17_-_70851710_70851738	0.382423	Smad4	ENSMUST00000166395.2|Tgif1|ENSMUSG00000047407.11|TGFB-induced factor homeobox 1
mm10_v2_chr8_-_47352348_47352367	0.357741	Smad4	ENSMUST00000110367.2|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chr2_+_152736244_152736261	0.356474	Smad4	ENSMUST00000038368.8|Id1|ENSMUSG00000042745.9|inhibitor of DNA binding 1 	ENSMUST00000109824.1|Id1|ENSMUSG00000042745.9|inhibitor of DNA binding 1
mm10_v2_chr10_+_33905015_33905111	0.356361	Smad4	ENSMUST00000169670.1|Rsph4a|ENSMUSG00000039552.7|radial spoke head 4 homolog A (Chlamydomonas)
mm10_v2_chr3_-_146839365_146839367	0.354215	Smad4	ENSMUST00000084614.3|Gm10288|ENSMUSG00000070343.2|predicted gene 10288
mm10_v2_chr7_+_45413657_45413705	0.35379	Smad4	ENSMUST00000058879.6|Ntf5|ENSMUSG00000074121.2|neurotrophin 5
mm10_v2_chr17_-_35162969_35163040	0.352142	Smad4	ENSMUST00000174805.1|Prrc2a|ENSMUSG00000024393.8|proline-rich coiled-coil 2A
mm10_v2_chr4_-_129742275_129742312	0.35177	Smad4	ENSMUST00000066257.5|Khdrbs1|ENSMUSG00000028790.7|KH domain containing, RNA binding, signal transduction associated 1
mm10_v2_chr7_+_82867327_82867357	0.347196	Smad4	ENSMUST00000082237.5|Mex3b|ENSMUSG00000057706.6|mex3 homolog B (C. elegans)
mm10_v2_chr9_+_13621646_13621646	0.346845	Smad4	ENSMUST00000034401.8|Maml2|ENSMUSG00000031925.10|mastermind like 2 (Drosophila)
mm10_v2_chr5_+_30913398_30913403	0.345633	Smad4	ENSMUST00000031055.5|Emilin1|ENSMUSG00000029163.7|elastin microfibril interfacer 1
mm10_v2_chr12_-_36156781_36156825	0.340463	Smad4	ENSMUST00000020856.4|Bzw2|ENSMUSG00000020547.4|basic leucine zipper and W2 domains 2
mm10_v2_chr18_+_60526194_60526234	0.335988	Smad4	ENSMUST00000025505.5|Dctn4|ENSMUSG00000024603.7|dynactin 4
mm10_v2_chr3_+_102734496_102734530	0.328629	Smad4	ENSMUST00000029451.5|Tspan2|ENSMUSG00000027858.7|tetraspanin 2
mm10_v2_chr13_-_98637354_98637410	0.320845	Smad4	ENSMUST00000050389.4|Tmem174|ENSMUSG00000046082.4|transmembrane protein 174
mm10_v2_chr14_-_25903100_25903100	0.306536	Smad4	ENSMUST00000052286.8|Plac9a|ENSMUSG00000095304.2|placenta specific 9a
mm10_v2_chr3_+_116968267_116968267	0.303908	Smad4	ENSMUST00000117592.1|4930455H04Rik|ENSMUSG00000080907.1|RIKEN cDNA 4930455H04 gene
mm10_v2_chr7_+_4690760_4690928	0.301973	Smad4	ENSMUST00000048248.7|Brsk1|ENSMUSG00000035390.10|BR serine/threonine kinase 1
mm10_v2_chr2_+_3114220_3114225	0.286537	Smad4	ENSMUST00000072955.5|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr14_-_54554359_54554370	0.286377	Smad4	ENSMUST00000022784.8|Haus4|ENSMUSG00000022177.8|HAUS augmin-like complex, subunit 4
mm10_v2_chr7_+_101421691_101421726	0.273671	Smad4	ENSMUST00000163751.2|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated 	ENSMUST00000084894.7|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated 	ENSMUST00000166652.1|Pde2a|ENSMUSG00000030653.10|phosphodiesterase 2A, cGMP-stimulated
mm10_v2_chr8_+_54954728_54954820	0.267515	Smad4	ENSMUST00000033915.7|Gpm6a|ENSMUSG00000031517.7|glycoprotein m6a
mm10_v2_chr14_-_55713088_55713110	0.261784	Smad4	ENSMUST00000002389.7|Tgm1|ENSMUSG00000022218.9|transglutaminase 1, K polypeptide
mm10_v2_chr11_-_102319093_102319105	0.259949	Smad4	ENSMUST00000174302.1|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I 	ENSMUST00000178839.1|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I 	ENSMUST00000006754.7|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I
mm10_v2_chr6_-_138422898_138422999	0.244053	Smad4	ENSMUST00000161450.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3 	ENSMUST00000163024.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3 	ENSMUST00000162185.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3
mm10_v2_chr2_+_128967383_128967443	0.242298	Smad4	ENSMUST00000110320.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6 	ENSMUST00000110319.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6
mm10_v2_chr7_+_101361250_101361287	0.227753	Smad4	ENSMUST00000137384.1|Arap1|ENSMUSG00000032812.10|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
mm10_v2_chr15_-_38300693_38300715	0.216938	Smad4	ENSMUST00000074043.5|Klf10|ENSMUSG00000037465.9|Kruppel-like factor 10
mm10_v2_chr15_+_58510037_58510053	0.200276	Smad4	ENSMUST00000161028.1|Fer1l6|ENSMUSG00000037106.8|fer-1-like 6 (C. elegans)
mm10_v2_chr5_+_75574916_75575001	0.19909	Smad4	ENSMUST00000144270.1|Kit|ENSMUSG00000005672.6|kit oncogene 	ENSMUST00000005815.6|Kit|ENSMUSG00000005672.6|kit oncogene
mm10_v2_chr11_-_103208542_103208558	0.194401	Smad4	ENSMUST00000021323.4|1700023F06Rik|ENSMUSG00000020940.7|RIKEN cDNA 1700023F06 gene 	ENSMUST00000107026.2|1700023F06Rik|ENSMUSG00000020940.7|RIKEN cDNA 1700023F06 gene
mm10_v2_chr5_+_64803513_64803530	0.18754	Smad4	ENSMUST00000165536.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr13_-_102958084_102958173	0.186181	Smad4	ENSMUST00000099202.3|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4 	ENSMUST00000172264.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr19_-_5295397_5295455	0.185354	Smad4	ENSMUST00000025774.9|Sf3b2|ENSMUSG00000024853.9|splicing factor 3b, subunit 2
mm10_v2_chr14_+_64950037_64950056	0.183635	Smad4	ENSMUST00000043914.5|Ints9|ENSMUSG00000021975.7|integrator complex subunit 9
mm10_v2_chr19_-_10738971_10738982	0.176148	Smad4	ENSMUST00000025571.7|Cd5|ENSMUSG00000024669.7|CD5 antigen
mm10_v2_chr7_+_127485221_127485221	0.175816	Smad4	ENSMUST00000048896.6|Fbrs|ENSMUSG00000042423.7|fibrosin
mm10_v2_chr5_+_7179299_7179365	0.16896	Smad4	ENSMUST00000179460.1|Tubb4b-ps1|ENSMUSG00000095159.1|tubulin, beta 4B class IVB, pseudogene 1
mm10_v2_chr3_+_96221111_96221134	0.155746	Smad4	ENSMUST00000090781.6|Hist2h2be|ENSMUSG00000068854.6|histone cluster 2, H2be
mm10_v2_chr11_-_69122589_69122589	0.146864	Smad4	ENSMUST00000180487.1|9130213A22Rik|ENSMUSG00000097386.1|RIKEN cDNA 9130213A22 gene
mm10_v2_chr4_+_128688726_128688795	0.146636	Smad4	ENSMUST00000106080.1|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila)
mm10_v2_chr6_+_38433913_38433965	0.145427	Smad4	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr5_+_19907774_19907861	0.14512	Smad4	ENSMUST00000115267.2|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr1_-_87101590_87101617	0.142554	Smad4	ENSMUST00000113270.2|Alpi|ENSMUSG00000079440.2|alkaline phosphatase, intestinal
mm10_v2_chr14_+_52835840_52835840	0.135102	Smad4	ENSMUST00000103586.2|Trav7d-5|ENSMUSG00000076776.2|T cell receptor alpha variable 7D-5
mm10_v2_chr1_-_143702832_143702893	0.129061	Smad4	ENSMUST00000018337.7|Cdc73|ENSMUSG00000026361.7|cell division cycle 73, Paf1/RNA polymerase II complex component
mm10_v2_chrX_-_150588071_150588153	0.127175	Smad4	ENSMUST00000140207.1|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112719.1|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112727.3|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112721.3|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000026303.9|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2
mm10_v2_chr11_-_95699143_95699143	0.126403	Smad4	ENSMUST00000062249.2|Gm9796|ENSMUSG00000045075.2|predicted gene 9796
mm10_v2_chr4_-_134245579_134245604	0.124644	Smad4	ENSMUST00000030644.7|Zfp593|ENSMUSG00000028840.10|zinc finger protein 593
mm10_v2_chr9_-_36767595_36767679	0.115835	Smad4	ENSMUST00000120381.2|Stt3a|ENSMUSG00000032116.11|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm10_v2_chr7_-_30362772_30362772	0.111645	Smad4	ENSMUST00000046351.5|Lrfn3|ENSMUSG00000036957.7|leucine rich repeat and fibronectin type III domain containing 3
mm10_v2_chr6_-_72520538_72520650	0.107936	Smad4	ENSMUST00000089687.4|Sh2d6|ENSMUSG00000052631.8|SH2 domain containing 6 	ENSMUST00000163451.1|Sh2d6|ENSMUSG00000052631.8|SH2 domain containing 6 	ENSMUST00000162561.1|Sh2d6|ENSMUSG00000052631.8|SH2 domain containing 6 	ENSMUST00000159877.1|Sh2d6|ENSMUSG00000052631.8|SH2 domain containing 6
mm10_v2_chr8_+_95825353_95825354	0.104582	Smad4	ENSMUST00000074053.4|Gm10094|ENSMUSG00000061104.4|predicted gene 10094
mm10_v2_chr3_+_36552600_36552677	0.102553	Smad4	ENSMUST00000029269.5|Exosc9|ENSMUSG00000027714.5|exosome component 9 	ENSMUST00000136890.1|Exosc9|ENSMUSG00000027714.5|exosome component 9
mm10_v2_chr14_-_20496780_20496901	0.102494	Smad4	ENSMUST00000022353.3|Mss51|ENSMUSG00000021815.3|MSS51 mitochondrial translational activator
mm10_v2_chr14_+_57826210_57826272	0.100687	Smad4	ENSMUST00000022538.3|Mrp63|ENSMUSG00000021967.3|mitochondrial ribosomal protein 63
mm10_v2_chr14_-_54577578_54577661	0.0965848	Smad4	ENSMUST00000054487.8|Ajuba|ENSMUSG00000022178.10|ajuba LIM protein
mm10_v2_chr13_+_111255010_111255018	0.0940512	Smad4	ENSMUST00000054716.3|Actbl2|ENSMUSG00000055194.3|actin, beta-like 2
mm10_v2_chr1_+_153891646_153891740	0.0858481	Smad4	ENSMUST00000050660.4|Teddm1|ENSMUSG00000047053.4|transmembrane epididymal protein 1
mm10_v2_chr1_-_180697034_180697034	0.0834991	Smad4	ENSMUST00000027778.7|Mixl1|ENSMUSG00000026497.7|Mix1 homeobox-like 1 (Xenopus laevis)
mm10_v2_chr1_-_64121456_64121491	0.0822522	Smad4	ENSMUST00000142009.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous) 	ENSMUST00000114086.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr1_+_72583245_72583282	0.0803452	Smad4	ENSMUST00000145868.1|Smarcal1|ENSMUSG00000039354.10|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 	ENSMUST00000133123.1|Smarcal1|ENSMUSG00000039354.10|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 	ENSMUST00000047615.8|Smarcal1|ENSMUSG00000039354.10|SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
mm10_v2_chr1_-_54194048_54194048	0.0786515	Smad4	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr15_+_89532816_89532890	0.0773888	Smad4	ENSMUST00000167173.1|Shank3|ENSMUSG00000022623.9|SH3/ankyrin domain gene 3
mm10_v2_chr9_+_96895617_96895617	0.0749226	Smad4	ENSMUST00000071781.6|Gm10123|ENSMUSG00000062933.6|predicted pseudogene 10123
mm10_v2_chrX_-_72274747_72274803	0.0742907	Smad4	ENSMUST00000064780.3|Gabre|ENSMUSG00000031340.8|gamma-aminobutyric acid (GABA) A receptor, subunit epsilon
mm10_v2_chr5_-_24445254_24445287	0.0721556	Smad4	ENSMUST00000030800.6|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase
mm10_v2_chr19_+_46328179_46328205	0.0620526	Smad4	ENSMUST00000026256.2|Fbxl15|ENSMUSG00000025226.5|F-box and leucine-rich repeat protein 15 	ENSMUST00000177667.1|Fbxl15|ENSMUSG00000025226.5|F-box and leucine-rich repeat protein 15
mm10_v2_chr7_+_110221697_110221708	0.0617311	Smad4	ENSMUST00000033325.7|Swap70|ENSMUSG00000031015.7|SWA-70 protein
mm10_v2_chr10_-_127534540_127534566	0.0571717	Smad4	ENSMUST00000095266.2|Nxph4|ENSMUSG00000040258.6|neurexophilin 4
mm10_v2_chr7_-_4778141_4778144	0.0545172	Smad4	ENSMUST00000094892.5|Il11|ENSMUSG00000004371.8|interleukin 11
mm10_v2_chr10_+_63457505_63457539	0.0538004	Smad4	ENSMUST00000105440.1|Ctnna3|ENSMUSG00000060843.5|catenin (cadherin associated protein), alpha 3
mm10_v2_chr5_-_24445166_24445220	0.0512033	Smad4	ENSMUST00000115043.1|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase 	ENSMUST00000115041.1|Fastk|ENSMUSG00000028959.8|Fas-activated serine/threonine kinase
mm10_v2_chr7_+_45785331_45785390	0.0499855	Smad4	ENSMUST00000120005.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3 	ENSMUST00000123585.1|Lmtk3|ENSMUSG00000062044.7|lemur tyrosine kinase 3
mm10_v2_chr14_+_50944499_50944514	0.0433905	Smad4	ENSMUST00000178092.1|Pnp|ENSMUSG00000021871.11|purine-nucleoside phosphorylase
mm10_v2_chr19_+_4231899_4231928	0.0417012	Smad4	ENSMUST00000025773.3|Pold4|ENSMUSG00000024854.3|polymerase (DNA-directed), delta 4
mm10_v2_chrX_+_99136119_99136138	0.0290229	Smad4	ENSMUST00000052839.6|Efnb1|ENSMUSG00000031217.8|ephrin B1
mm10_v2_chr6_+_108660772_108660874	0.0269597	Smad4	ENSMUST00000163617.1|Bhlhe40|ENSMUSG00000030103.5|basic helix-loop-helix family, member e40
mm10_v2_chr1_-_75232093_75232093	0.0261441	Smad4	ENSMUST00000180101.1|A630095N17Rik|ENSMUSG00000096094.1|RIKEN cDNA A630095N17 gene
mm10_v2_chr14_+_55510445_55510631	0.0244216	Smad4	ENSMUST00000165262.1|Cpne6|ENSMUSG00000022212.9|copine VI 	ENSMUST00000074225.4|Cpne6|ENSMUSG00000022212.9|copine VI
mm10_v2_chr2_-_128967725_128967725	0.0234821	Smad4	ENSMUST00000099385.2|Gm10762|ENSMUSG00000074807.2|predicted gene 10762
mm10_v2_chr11_+_53433299_53433357	0.0202495	Smad4	ENSMUST00000018382.6|Gdf9|ENSMUSG00000018238.6|growth differentiation factor 9
mm10_v2_chr7_+_128203598_128203612	0.0197902	Smad4	ENSMUST00000177383.1|Itgad|ENSMUSG00000070369.7|integrin, alpha D
mm10_v2_chr10_-_92164666_92164754	0.0162732	Smad4	ENSMUST00000183123.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000182033.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr4_+_99272671_99272671	0.00736011	Smad4	ENSMUST00000094956.1|Gm10305|ENSMUSG00000070892.1|predicted gene 10305
