mm10_v2_chr9_-_75441652_75441652	0.940974	Rorc_Nr1d1	ENSMUST00000181896.1|A130057D12Rik|ENSMUSG00000097298.1|RIKEN cDNA A130057D12 gene
mm10_v2_chr7_-_134232125_134232146	0.78598	Rorc_Nr1d1	ENSMUST00000127524.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr7_-_134232005_134232054	0.748694	Rorc_Nr1d1	ENSMUST00000134504.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr1_-_120505084_120505084	0.688636	Rorc_Nr1d1	ENSMUST00000027639.1|Marco|ENSMUSG00000026390.1|macrophage receptor with collagenous structure
mm10_v2_chr7_-_142661305_142661314	0.627298	Rorc_Nr1d1	ENSMUST00000105936.1|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr7_-_142661858_142661880	0.626613	Rorc_Nr1d1	ENSMUST00000145896.2|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr7_+_45705088_45705292	0.600809	Rorc_Nr1d1	ENSMUST00000080885.3|Dbp|ENSMUSG00000059824.4|D site albumin promoter binding protein
mm10_v2_chr2_+_158502633_158502698	0.518843	Rorc_Nr1d1	ENSMUST00000109484.1|Adig|ENSMUSG00000044405.4|adipogenin
mm10_v2_chr2_+_158502612_158502632	0.484162	Rorc_Nr1d1	ENSMUST00000059889.3|Adig|ENSMUSG00000044405.4|adipogenin
mm10_v2_chr10_+_95417352_95417385	0.462304	Rorc_Nr1d1	ENSMUST00000181781.1|5730420D15Rik|ENSMUSG00000097766.1|RIKEN cDNA 5730420D15 gene
mm10_v2_chrX_-_136203637_136203926	0.414192	Rorc_Nr1d1	ENSMUST00000151592.1|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5 	ENSMUST00000131510.1|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5 	ENSMUST00000066819.4|Tceal5|ENSMUSG00000054034.4|transcription elongation factor A (SII)-like 5
mm10_v2_chr15_-_65014904_65014904	0.369141	Rorc_Nr1d1	ENSMUST00000110100.2|Gm21961|ENSMUSG00000079024.2|predicted gene, 21961
mm10_v2_chr2_+_90885860_90885872	0.360785	Rorc_Nr1d1	ENSMUST00000111466.2|C1qtnf4|ENSMUSG00000040794.5|C1q and tumor necrosis factor related protein 4
mm10_v2_chr12_-_40248073_40248086	0.315858	Rorc_Nr1d1	ENSMUST00000169926.1|Ifrd1|ENSMUSG00000001627.5|interferon-related developmental regulator 1
mm10_v2_chr12_-_111980751_111980751	0.312393	Rorc_Nr1d1	ENSMUST00000170525.1|BC048943|ENSMUSG00000091402.1|cDNA sequence BC048943
mm10_v2_chr7_-_19118357_19118404	0.302036	Rorc_Nr1d1	ENSMUST00000141380.1|Gm4969|ENSMUSG00000085601.1|predicted gene 4969
mm10_v2_chr13_-_22219820_22219820	0.263163	Rorc_Nr1d1	ENSMUST00000057516.1|Vmn1r193|ENSMUSG00000046932.1|vomeronasal 1 receptor 193
mm10_v2_chr10_+_130322845_130322856	0.263053	Rorc_Nr1d1	ENSMUST00000042586.8|Tespa1|ENSMUSG00000034833.9|thymocyte expressed, positive selection associated 1
mm10_v2_chr3_+_79884496_79884571	0.242093	Rorc_Nr1d1	ENSMUST00000118853.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr5_+_144190284_144190334	0.239249	Rorc_Nr1d1	ENSMUST00000060747.7|Bhlha15|ENSMUSG00000052271.7|basic helix-loop-helix family, member a15
mm10_v2_chr9_-_45204083_45204106	0.236266	Rorc_Nr1d1	ENSMUST00000034599.8|Tmprss4|ENSMUSG00000032091.8|transmembrane protease, serine 4
mm10_v2_chr3_+_79884576_79884597	0.231788	Rorc_Nr1d1	ENSMUST00000145992.1|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr11_+_94327984_94328029	0.227723	Rorc_Nr1d1	ENSMUST00000107818.2|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40 	ENSMUST00000051221.6|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chrX_-_102252154_102252181	0.226717	Rorc_Nr1d1	ENSMUST00000050551.3|Cited1|ENSMUSG00000051159.10|Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
mm10_v2_chr7_+_114768736_114768763	0.198937	Rorc_Nr1d1	ENSMUST00000117543.1|Insc|ENSMUSG00000048782.9|inscuteable homolog (Drosophila)
mm10_v2_chr2_+_4389614_4389639	0.195126	Rorc_Nr1d1	ENSMUST00000115037.2|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr17_+_24886643_24886765	0.192733	Rorc_Nr1d1	ENSMUST00000117890.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000168265.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000120943.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000068508.6|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3 	ENSMUST00000119829.1|Spsb3|ENSMUSG00000024160.10|splA/ryanodine receptor domain and SOCS box containing 3
mm10_v2_chr10_-_128401218_128401234	0.190931	Rorc_Nr1d1	ENSMUST00000042666.5|Slc39a5|ENSMUSG00000039878.6|solute carrier family 39 (metal ion transporter), member 5
mm10_v2_chrX_+_7607099_7607129	0.183694	Rorc_Nr1d1	ENSMUST00000115726.2|Cacna1f|ENSMUSG00000031142.11|calcium channel, voltage-dependent, alpha 1F subunit 	ENSMUST00000133637.1|Cacna1f|ENSMUSG00000031142.11|calcium channel, voltage-dependent, alpha 1F subunit 	ENSMUST00000115725.2|Cacna1f|ENSMUSG00000031142.11|calcium channel, voltage-dependent, alpha 1F subunit
mm10_v2_chr11_-_98329641_98329654	0.176702	Rorc_Nr1d1	ENSMUST00000041685.6|Neurod2|ENSMUSG00000038255.6|neurogenic differentiation 2
mm10_v2_chr12_-_34528844_34528904	0.174801	Rorc_Nr1d1	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr11_+_94328242_94328261	0.17273	Rorc_Nr1d1	ENSMUST00000021227.5|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr2_-_164473714_164473730	0.166814	Rorc_Nr1d1	ENSMUST00000017864.2|Trp53tg5|ENSMUSG00000017720.2|transformation related protein 53 target 5
mm10_v2_chr4_+_11579647_11579674	0.164015	Rorc_Nr1d1	ENSMUST00000180239.1|Fsbp|ENSMUSG00000094595.1|fibrinogen silencer binding protein
mm10_v2_chr5_+_64970069_64970089	0.163072	Rorc_Nr1d1	ENSMUST00000031080.8|Fam114a1|ENSMUSG00000029185.8|family with sequence similarity 114, member A1
mm10_v2_chr7_-_45211877_45211887	0.157696	Rorc_Nr1d1	ENSMUST00000033057.7|Dkkl1|ENSMUSG00000030792.7|dickkopf-like 1
mm10_v2_chr17_+_45686322_45686402	0.156723	Rorc_Nr1d1	ENSMUST00000024734.7|Mrpl14|ENSMUSG00000023939.7|mitochondrial ribosomal protein L14
mm10_v2_chr11_-_4095344_4095445	0.156507	Rorc_Nr1d1	ENSMUST00000004868.5|Mtfp1|ENSMUSG00000004748.5|mitochondrial fission process 1
mm10_v2_chr1_-_172590463_172590568	0.156117	Rorc_Nr1d1	ENSMUST00000065679.6|Slamf8|ENSMUSG00000053318.6|SLAM family member 8
mm10_v2_chr2_+_57997884_57997884	0.155026	Rorc_Nr1d1	ENSMUST00000112616.1|Galnt5|ENSMUSG00000026828.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 	ENSMUST00000166729.1|Galnt5|ENSMUSG00000026828.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5
mm10_v2_chr17_-_36867187_36867253	0.153889	Rorc_Nr1d1	ENSMUST00000025329.6|Trim15|ENSMUSG00000050747.8|tripartite motif-containing 15 	ENSMUST00000174195.1|Trim15|ENSMUSG00000050747.8|tripartite motif-containing 15
mm10_v2_chr17_+_24896488_24896530	0.152508	Rorc_Nr1d1	ENSMUST00000024978.6|Nme3|ENSMUSG00000073435.4|NME/NM23 nucleoside diphosphate kinase 3
mm10_v2_chr8_-_107065632_107065650	0.152066	Rorc_Nr1d1	ENSMUST00000034393.5|Tmed6|ENSMUSG00000031919.5|transmembrane emp24 protein transport domain containing 6
mm10_v2_chr14_-_60197173_60197185	0.151903	Rorc_Nr1d1	ENSMUST00000131670.1|Atp8a2|ENSMUSG00000021983.9|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm10_v2_chr11_+_66956620_66956667	0.140665	Rorc_Nr1d1	ENSMUST00000150220.1|9130409J20Rik|ENSMUSG00000085683.1|RIKEN cDNA 9130409J20 gene
mm10_v2_chr8_+_3665747_3665763	0.139371	Rorc_Nr1d1	ENSMUST00000014118.2|1810033B17Rik|ENSMUSG00000013974.2|RIKEN cDNA 1810033B17 gene
mm10_v2_chr7_+_114768767_114768781	0.139362	Rorc_Nr1d1	ENSMUST00000151464.1|Insc|ENSMUSG00000048782.9|inscuteable homolog (Drosophila)
mm10_v2_chr6_-_88874045_88874070	0.132652	Rorc_Nr1d1	ENSMUST00000038409.5|Podxl2|ENSMUSG00000033152.7|podocalyxin-like 2
mm10_v2_chr14_+_73142490_73142564	0.128978	Rorc_Nr1d1	ENSMUST00000170370.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 	ENSMUST00000164822.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 	ENSMUST00000165429.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm10_v2_chr15_-_11995998_11996058	0.127505	Rorc_Nr1d1	ENSMUST00000022816.8|Sub1|ENSMUSG00000022205.9|SUB1 homolog (S. cerevisiae)
mm10_v2_chr4_+_94739276_94739300	0.127497	Rorc_Nr1d1	ENSMUST00000073939.6|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase 	ENSMUST00000102798.1|Tek|ENSMUSG00000006386.9|endothelial-specific receptor tyrosine kinase
mm10_v2_chr8_-_85080679_85080746	0.127044	Rorc_Nr1d1	ENSMUST00000093357.5|Wdr83|ENSMUSG00000005150.10|WD repeat domain containing 83
mm10_v2_chr6_+_61180313_61180400	0.123828	Rorc_Nr1d1	ENSMUST00000126214.1|Ccser1|ENSMUSG00000039578.10|coiled-coil serine rich 1
mm10_v2_chr3_+_90600203_90600219	0.122381	Rorc_Nr1d1	ENSMUST00000001047.7|S100a3|ENSMUSG00000001021.8|S100 calcium binding protein A3
mm10_v2_chr4_+_115784799_115784837	0.117572	Rorc_Nr1d1	ENSMUST00000177280.1|Atpaf1|ENSMUSG00000028710.10|ATP synthase mitochondrial F1 complex assembly factor 1 	ENSMUST00000176047.1|Atpaf1|ENSMUSG00000028710.10|ATP synthase mitochondrial F1 complex assembly factor 1 	ENSMUST00000030478.6|Atpaf1|ENSMUSG00000028710.10|ATP synthase mitochondrial F1 complex assembly factor 1
mm10_v2_chr4_+_3940747_3940854	0.111426	Rorc_Nr1d1	ENSMUST00000119403.1|Chchd7|ENSMUSG00000042198.6|coiled-coil-helix-coiled-coil-helix domain containing 7
mm10_v2_chr6_-_42520325_42520325	0.108466	Rorc_Nr1d1	ENSMUST00000104977.2|Gm4877|ENSMUSG00000078177.2|predicted gene 4877
mm10_v2_chr9_-_30922452_30922567	0.10816	Rorc_Nr1d1	ENSMUST00000065112.6|Adamts15|ENSMUSG00000033453.7|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15
mm10_v2_chr15_+_102270540_102270580	0.10717	Rorc_Nr1d1	ENSMUST00000181801.1|Gm9918|ENSMUSG00000097050.1|predicted gene 9918
mm10_v2_chrX_+_103422010_103422010	0.0947681	Rorc_Nr1d1	ENSMUST00000182089.1|Gm26992|ENSMUSG00000098078.1|predicted gene, 26992
mm10_v2_chr10_+_57784859_57784903	0.094306	Rorc_Nr1d1	ENSMUST00000020024.5|Fabp7|ENSMUSG00000019874.5|fatty acid binding protein 7, brain
mm10_v2_chr3_+_90603767_90603771	0.0938558	Rorc_Nr1d1	ENSMUST00000001046.5|S100a4|ENSMUSG00000001020.7|S100 calcium binding protein A4 	ENSMUST00000107330.1|S100a4|ENSMUSG00000001020.7|S100 calcium binding protein A4
mm10_v2_chr2_-_167833642_167833648	0.0932465	Rorc_Nr1d1	ENSMUST00000143649.1|1200007C13Rik|ENSMUSG00000087684.1|RIKEN cDNA 1200007C13 gene
mm10_v2_chr11_+_114890041_114890041	0.0924055	Rorc_Nr1d1	ENSMUST00000106582.2|Cd300a|ENSMUSG00000034652.6|CD300A antigen 	ENSMUST00000045151.5|Cd300a|ENSMUSG00000034652.6|CD300A antigen
mm10_v2_chr18_+_84935158_84935158	0.0912233	Rorc_Nr1d1	ENSMUST00000037718.9|Fbxo15|ENSMUSG00000034391.10|F-box protein 15
mm10_v2_chr2_+_155751117_155751284	0.0904057	Rorc_Nr1d1	ENSMUST00000029140.5|Procr|ENSMUSG00000027611.6|protein C receptor, endothelial 	ENSMUST00000132608.1|Procr|ENSMUSG00000027611.6|protein C receptor, endothelial
mm10_v2_chr16_+_22009471_22009543	0.0893481	Rorc_Nr1d1	ENSMUST00000023561.7|Senp2|ENSMUSG00000022855.8|SUMO/sentrin specific peptidase 2
mm10_v2_chr12_-_72408934_72409054	0.0893278	Rorc_Nr1d1	ENSMUST00000078505.7|Rtn1|ENSMUSG00000021087.11|reticulon 1
mm10_v2_chr11_-_94653964_94653964	0.088671	Rorc_Nr1d1	ENSMUST00000039949.4|Eme1|ENSMUSG00000039055.4|essential meiotic endonuclease 1 homolog 1 (S. pombe)
mm10_v2_chr11_+_96931387_96931516	0.0866703	Rorc_Nr1d1	ENSMUST00000107633.1|Prr15l|ENSMUSG00000047040.9|proline rich 15-like
mm10_v2_chr7_-_105600103_105600123	0.0861845	Rorc_Nr1d1	ENSMUST00000033185.8|Hpx|ENSMUSG00000030895.8|hemopexin
mm10_v2_chr11_+_88718442_88718645	0.0861837	Rorc_Nr1d1	ENSMUST00000138007.1|C030037D09Rik|ENSMUSG00000087574.1|RIKEN cDNA C030037D09 gene
mm10_v2_chr10_+_73821857_73821883	0.0842288	Rorc_Nr1d1	ENSMUST00000177128.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000064562.7|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000129404.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105426.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131321.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000126920.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000147189.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105424.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000092420.6|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105429.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131724.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152655.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000151116.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000155701.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152819.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000125517.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000124046.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000149977.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000146682.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000177107.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15
mm10_v2_chr11_+_40733936_40733947	0.0836478	Rorc_Nr1d1	ENSMUST00000127382.1|Nudcd2|ENSMUSG00000020328.4|NudC domain containing 2
mm10_v2_chr14_+_34053466_34053473	0.081605	Rorc_Nr1d1	ENSMUST00000058725.3|Antxrl|ENSMUSG00000047441.3|anthrax toxin receptor-like
mm10_v2_chr7_-_79386943_79387027	0.0784934	Rorc_Nr1d1	ENSMUST00000053718.8|Rlbp1|ENSMUSG00000039194.9|retinaldehyde binding protein 1 	ENSMUST00000179243.1|Rlbp1|ENSMUSG00000039194.9|retinaldehyde binding protein 1
mm10_v2_chr14_+_27622433_27622543	0.0782346	Rorc_Nr1d1	ENSMUST00000090302.5|Erc2|ENSMUSG00000040640.9|ELKS/RAB6-interacting/CAST family member 2
mm10_v2_chr9_+_75441518_75441575	0.0760892	Rorc_Nr1d1	ENSMUST00000048937.4|Leo1|ENSMUSG00000042487.5|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm10_v2_chr8_-_85080652_85080673	0.0758595	Rorc_Nr1d1	ENSMUST00000152785.1|Wdr83|ENSMUSG00000005150.10|WD repeat domain containing 83
mm10_v2_chr7_-_45615484_45615490	0.0739991	Rorc_Nr1d1	ENSMUST00000033099.4|Fgf21|ENSMUSG00000030827.4|fibroblast growth factor 21
mm10_v2_chr12_+_112489448_112489479	0.072375	Rorc_Nr1d1	ENSMUST00000057465.6|A530016L24Rik|ENSMUSG00000043122.6|RIKEN cDNA A530016L24 gene
mm10_v2_chr10_-_61476937_61476937	0.0711719	Rorc_Nr1d1	ENSMUST00000051330.4|D830039M14Rik|ENSMUSG00000043126.4|RIKEN cDNA D830039M14 gene
mm10_v2_chr6_-_128275577_128275577	0.0704098	Rorc_Nr1d1	ENSMUST00000130454.1|Tead4|ENSMUSG00000030353.9|TEA domain family member 4
mm10_v2_chr4_-_83052147_83052185	0.0697518	Rorc_Nr1d1	ENSMUST00000170248.2|Frem1|ENSMUSG00000059049.8|Fras1 related extracellular matrix protein 1
mm10_v2_chr17_-_45686214_45686265	0.0671231	Rorc_Nr1d1	ENSMUST00000113523.2|Tmem63b|ENSMUSG00000036026.9|transmembrane protein 63b
mm10_v2_chr1_-_162478004_162478034	0.0666557	Rorc_Nr1d1	ENSMUST00000086074.5|Dnm3|ENSMUSG00000040265.10|dynamin 3 	ENSMUST00000070330.7|Dnm3|ENSMUSG00000040265.10|dynamin 3
mm10_v2_chr6_-_29380426_29380435	0.0665941	Rorc_Nr1d1	ENSMUST00000147483.2|Opn1sw|ENSMUSG00000058831.7|opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
mm10_v2_chr3_+_108364882_108364911	0.066449	Rorc_Nr1d1	ENSMUST00000090563.5|Mybphl|ENSMUSG00000068745.5|myosin binding protein H-like
mm10_v2_chr7_-_67803489_67803532	0.0658879	Rorc_Nr1d1	ENSMUST00000181235.1|4833412C05Rik|ENSMUSG00000097697.1|RIKEN cDNA 4833412C05 gene
mm10_v2_chr16_-_21995478_21995542	0.0657733	Rorc_Nr1d1	ENSMUST00000074230.4|Liph|ENSMUSG00000044626.6|lipase, member H 	ENSMUST00000060673.6|Liph|ENSMUSG00000044626.6|lipase, member H
mm10_v2_chr6_-_97205549_97205642	0.0651726	Rorc_Nr1d1	ENSMUST00000164744.1|Uba3|ENSMUSG00000030061.10|ubiquitin-like modifier activating enzyme 3 	ENSMUST00000089287.5|Uba3|ENSMUSG00000030061.10|ubiquitin-like modifier activating enzyme 3
mm10_v2_chr14_-_50893255_50893255	0.0649983	Rorc_Nr1d1	ENSMUST00000164415.1|Klhl33|ENSMUSG00000090799.1|kelch-like 33
mm10_v2_chr3_+_133338936_133339109	0.0644881	Rorc_Nr1d1	ENSMUST00000150386.1|Ppa2|ENSMUSG00000028013.10|pyrophosphatase (inorganic) 2 	ENSMUST00000125858.1|Ppa2|ENSMUSG00000028013.10|pyrophosphatase (inorganic) 2
mm10_v2_chr17_-_62606679_62606707	0.0639286	Rorc_Nr1d1	ENSMUST00000163332.1|Efna5|ENSMUSG00000090425.1|ephrin A5
mm10_v2_chr16_-_20730544_20730627	0.0634553	Rorc_Nr1d1	ENSMUST00000076422.5|Thpo|ENSMUSG00000022847.8|thrombopoietin
mm10_v2_chr12_-_24493656_24493656	0.0617466	Rorc_Nr1d1	ENSMUST00000073088.2|Gm16372|ENSMUSG00000057160.2|predicted pseudogene 16372
mm10_v2_chr1_+_160195215_160195303	0.0614623	Rorc_Nr1d1	ENSMUST00000135680.1|Mrps14|ENSMUSG00000058267.7|mitochondrial ribosomal protein S14 	ENSMUST00000097193.2|Mrps14|ENSMUSG00000058267.7|mitochondrial ribosomal protein S14
mm10_v2_chr4_-_33189410_33189455	0.0577346	Rorc_Nr1d1	ENSMUST00000098181.2|Pm20d2|ENSMUSG00000054659.7|peptidase M20 domain containing 2
mm10_v2_chr1_+_49244616_49244616	0.0565214	Rorc_Nr1d1	ENSMUST00000056879.8|C230029F24Rik|ENSMUSG00000051616.8|RIKEN cDNA C230029F24 gene
mm10_v2_chr10_-_81291227_81291282	0.0557615	Rorc_Nr1d1	ENSMUST00000045744.6|Tjp3|ENSMUSG00000034917.7|tight junction protein 3
mm10_v2_chr15_-_10485385_10485422	0.053887	Rorc_Nr1d1	ENSMUST00000168690.1|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
mm10_v2_chr17_+_37046555_37046600	0.0528635	Rorc_Nr1d1	ENSMUST00000172789.1|Gabbr1|ENSMUSG00000024462.11|gamma-aminobutyric acid (GABA) B receptor, 1
mm10_v2_chr14_+_118787894_118787942	0.0520153	Rorc_Nr1d1	ENSMUST00000047761.6|Cldn10|ENSMUSG00000022132.9|claudin 10 	ENSMUST00000071546.7|Cldn10|ENSMUSG00000022132.9|claudin 10
mm10_v2_chr3_-_84304762_84304809	0.0500189	Rorc_Nr1d1	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr4_-_63605126_63605261	0.0475121	Rorc_Nr1d1	ENSMUST00000136620.1|Gm11213|ENSMUSG00000084782.1|predicted gene 11213
mm10_v2_chr7_+_13398115_13398132	0.0472584	Rorc_Nr1d1	ENSMUST00000005791.7|Cabp5|ENSMUSG00000005649.11|calcium binding protein 5
mm10_v2_chr7_+_45627482_45627493	0.0471809	Rorc_Nr1d1	ENSMUST00000057927.7|Rasip1|ENSMUSG00000044562.10|Ras interacting protein 1
mm10_v2_chrX_+_70385870_70385944	0.045585	Rorc_Nr1d1	ENSMUST00000053981.5|1110012L19Rik|ENSMUSG00000045237.5|RIKEN cDNA 1110012L19 gene
mm10_v2_chr11_-_59290746_59290758	0.04473	Rorc_Nr1d1	ENSMUST00000010044.7|Wnt3a|ENSMUSG00000009900.7|wingless-related MMTV integration site 3A
mm10_v2_chrX_-_16911774_16911774	0.044674	Rorc_Nr1d1	ENSMUST00000040134.7|Ndp|ENSMUSG00000040138.7|Norrie disease (pseudoglioma) (human)
mm10_v2_chr2_+_127909058_127909058	0.0444662	Rorc_Nr1d1	ENSMUST00000110344.1|Acoxl|ENSMUSG00000027380.4|acyl-Coenzyme A oxidase-like
mm10_v2_chr3_-_10208569_10208586	0.0439507	Rorc_Nr1d1	ENSMUST00000029041.4|Fabp4|ENSMUSG00000062515.2|fatty acid binding protein 4, adipocyte
mm10_v2_chr10_+_106470281_106470367	0.0436336	Rorc_Nr1d1	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr15_-_81871883_81871916	0.0432865	Rorc_Nr1d1	ENSMUST00000023117.8|Phf5a|ENSMUSG00000061360.7|PHD finger protein 5A
mm10_v2_chr1_+_143739551_143739566	0.0429679	Rorc_Nr1d1	ENSMUST00000050491.9|Glrx2|ENSMUSG00000018196.12|glutaredoxin 2 (thioltransferase)
mm10_v2_chr15_-_10485890_10485951	0.0402132	Rorc_Nr1d1	ENSMUST00000169050.1|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) 	ENSMUST00000022855.5|Brix1|ENSMUSG00000022247.6|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
mm10_v2_chrX_-_143933089_143933142	0.0397532	Rorc_Nr1d1	ENSMUST00000087313.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr11_+_87581041_87581067	0.0395268	Rorc_Nr1d1	ENSMUST00000018544.5|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000063156.4|Sept4|ENSMUSG00000020486.12|septin 4 	ENSMUST00000107960.1|Sept4|ENSMUSG00000020486.12|septin 4
mm10_v2_chrX_-_143933204_143933311	0.0392154	Rorc_Nr1d1	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr5_-_115484297_115484387	0.0390465	Rorc_Nr1d1	ENSMUST00000112067.1|Sirt4|ENSMUSG00000029524.10|sirtuin 4
mm10_v2_chr5_+_145083830_145083887	0.0387392	Rorc_Nr1d1	ENSMUST00000031625.8|Arpc1a|ENSMUSG00000029621.8|actin related protein 2/3 complex, subunit 1A
mm10_v2_chr6_-_124712131_124712178	0.0380018	Rorc_Nr1d1	ENSMUST00000004379.5|Emg1|ENSMUSG00000004268.5|EMG1 nucleolar protein homolog (S. cerevisiae)
mm10_v2_chr16_-_37384915_37384931	0.0375223	Rorc_Nr1d1	ENSMUST00000114787.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114782.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000023526.2|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114775.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like
mm10_v2_chr4_+_54945038_54945082	0.0366015	Rorc_Nr1d1	ENSMUST00000133895.1|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chr4_+_98546919_98546973	0.0355133	Rorc_Nr1d1	ENSMUST00000030290.7|Inadl|ENSMUSG00000061859.10|InaD-like (Drosophila)
mm10_v2_chr10_-_120899067_120899101	0.0354219	Rorc_Nr1d1	ENSMUST00000092143.5|Msrb3|ENSMUSG00000051236.7|methionine sulfoxide reductase B3
mm10_v2_chr15_+_10486008_10486080	0.0321976	Rorc_Nr1d1	ENSMUST00000022856.8|Rad1|ENSMUSG00000022248.8|RAD1 homolog (S. pombe) 	ENSMUST00000100775.3|Rad1|ENSMUSG00000022248.8|RAD1 homolog (S. pombe) 	ENSMUST00000169519.1|Rad1|ENSMUSG00000022248.8|RAD1 homolog (S. pombe)
mm10_v2_chr14_-_54577578_54577661	0.0304293	Rorc_Nr1d1	ENSMUST00000054487.8|Ajuba|ENSMUSG00000022178.10|ajuba LIM protein
mm10_v2_chr1_+_86703788_86703843	0.0292732	Rorc_Nr1d1	ENSMUST00000168237.1|Dis3l2|ENSMUSG00000053333.9|DIS3 mitotic control homolog (S. cerevisiae)-like 2 	ENSMUST00000065694.6|Dis3l2|ENSMUSG00000053333.9|DIS3 mitotic control homolog (S. cerevisiae)-like 2
mm10_v2_chr17_-_34628005_34628039	0.0281502	Rorc_Nr1d1	ENSMUST00000166040.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2
mm10_v2_chr13_-_8871696_8871749	0.0280289	Rorc_Nr1d1	ENSMUST00000054251.6|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37 	ENSMUST00000176813.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr14_+_105258712_105258758	0.0273417	Rorc_Nr1d1	ENSMUST00000138283.1|Ndfip2|ENSMUSG00000053253.10|Nedd4 family interacting protein 2
mm10_v2_chr7_-_126922887_126922926	0.0269995	Rorc_Nr1d1	ENSMUST00000134134.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000119781.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000121612.2|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chr15_-_25149072_25149159	0.0258238	Rorc_Nr1d1	ENSMUST00000056401.4|9230109A22Rik|ENSMUSG00000051237.6|RIKEN cDNA 9230109A22 gene
mm10_v2_chr8_-_3624989_3625014	0.0244593	Rorc_Nr1d1	ENSMUST00000142431.1|Pcp2|ENSMUSG00000004630.12|Purkinje cell protein 2 (L7)
mm10_v2_chr6_-_67491849_67491862	0.0235997	Rorc_Nr1d1	ENSMUST00000118364.1|Il23r|ENSMUSG00000049093.9|interleukin 23 receptor
mm10_v2_chr18_-_43477764_43477836	0.0234111	Rorc_Nr1d1	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chr9_-_106447584_106447689	0.0230338	Rorc_Nr1d1	ENSMUST00000171678.1|Abhd14a|ENSMUSG00000042210.10|abhydrolase domain containing 14A 	ENSMUST00000048685.6|Abhd14a|ENSMUSG00000042210.10|abhydrolase domain containing 14A 	ENSMUST00000171925.1|Abhd14a|ENSMUSG00000042210.10|abhydrolase domain containing 14A
mm10_v2_chr17_+_25369267_25369289	0.022563	Rorc_Nr1d1	ENSMUST00000160377.1|Tpsg1|ENSMUSG00000033200.10|tryptase gamma 1 	ENSMUST00000160485.1|Tpsg1|ENSMUSG00000033200.10|tryptase gamma 1
mm10_v2_chr13_+_52596847_52596858	0.0203499	Rorc_Nr1d1	ENSMUST00000055087.6|Syk|ENSMUSG00000021457.8|spleen tyrosine kinase
mm10_v2_chr14_-_55524938_55524967	0.0199989	Rorc_Nr1d1	ENSMUST00000178694.1|Nrl|ENSMUSG00000040632.9|neural retina leucine zipper gene
mm10_v2_chr8_-_24596960_24597009	0.0194584	Rorc_Nr1d1	ENSMUST00000033956.6|Ido1|ENSMUSG00000031551.6|indoleamine 2,3-dioxygenase 1
mm10_v2_chr3_-_101307079_101307079	0.018788	Rorc_Nr1d1	ENSMUST00000097146.2|Gm10355|ENSMUSG00000072381.2|predicted gene 10355
mm10_v2_chr17_-_34628380_34628510	0.0180089	Rorc_Nr1d1	ENSMUST00000167097.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2
mm10_v2_chr12_-_54695829_54695884	0.0166766	Rorc_Nr1d1	ENSMUST00000162106.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000160085.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000161592.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein 	ENSMUST00000163433.1|Eapp|ENSMUSG00000054302.9|E2F-associated phosphoprotein
mm10_v2_chr7_-_142176001_142176007	0.0160356	Rorc_Nr1d1	ENSMUST00000067978.5|Krtap5-2|ENSMUSG00000054759.5|keratin associated protein 5-2
mm10_v2_chr6_-_30896735_30896794	0.0154052	Rorc_Nr1d1	ENSMUST00000048774.6|Copg2|ENSMUSG00000025607.9|coatomer protein complex, subunit gamma 2 	ENSMUST00000166192.1|Copg2|ENSMUSG00000025607.9|coatomer protein complex, subunit gamma 2 	ENSMUST00000135230.1|Copg2|ENSMUSG00000025607.9|coatomer protein complex, subunit gamma 2
mm10_v2_chr7_-_30559600_30559659	0.0140321	Rorc_Nr1d1	ENSMUST00000043975.4|Lin37|ENSMUSG00000036845.6|lin-37 homolog (C. elegans) 	ENSMUST00000156241.1|Lin37|ENSMUSG00000036845.6|lin-37 homolog (C. elegans)
mm10_v2_chr11_-_14179040_14179081	0.0122907	Rorc_Nr1d1	ENSMUST00000126260.1|4930554G24Rik|ENSMUSG00000085452.1|RIKEN cDNA 4930554G24 gene
mm10_v2_chr11_-_51688614_51688669	0.00958377	Rorc_Nr1d1	ENSMUST00000007921.2|0610009B22Rik|ENSMUSG00000007777.3|RIKEN cDNA 0610009B22 gene
mm10_v2_chr3_-_103809278_103809444	0.00946819	Rorc_Nr1d1	ENSMUST00000063502.6|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000106832.1|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000106834.1|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) 	ENSMUST00000029435.8|Dclre1b|ENSMUSG00000027845.9|DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae)
mm10_v2_chr6_+_134830145_134830179	0.00906403	Rorc_Nr1d1	ENSMUST00000046303.5|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chr8_-_3694167_3694183	0.00855255	Rorc_Nr1d1	ENSMUST00000005678.4|Fcer2a|ENSMUSG00000005540.9|Fc receptor, IgE, low affinity II, alpha polypeptide
mm10_v2_chr16_-_37384940_37384978	0.00843242	Rorc_Nr1d1	ENSMUST00000114781.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114780.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like
mm10_v2_chr13_+_21495218_21495260	0.00804029	Rorc_Nr1d1	ENSMUST00000104942.1|AK157302|ENSMUSG00000078139.3|cDNA sequence AK157302
mm10_v2_chr3_-_53463234_53463306	0.00786177	Rorc_Nr1d1	ENSMUST00000056749.7|Nhlrc3|ENSMUSG00000042997.7|NHL repeat containing 3
mm10_v2_chr11_+_68901538_68901635	0.00739653	Rorc_Nr1d1	ENSMUST00000073471.6|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000101014.2|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000128952.1|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000167436.1|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26
mm10_v2_chr12_+_100110148_100110193	0.00614239	Rorc_Nr1d1	ENSMUST00000021595.8|Psmc1|ENSMUSG00000021178.8|protease (prosome, macropain) 26S subunit, ATPase 1
mm10_v2_chr5_-_122779278_122779434	0.00552333	Rorc_Nr1d1	ENSMUST00000111668.3|Camkk2|ENSMUSG00000029471.9|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm10_v2_chr2_-_153015331_153015427	0.00510689	Rorc_Nr1d1	ENSMUST00000028972.8|Pdrg1|ENSMUSG00000027472.8|p53 and DNA damage regulated 1
mm10_v2_chr11_+_3650253_3650253	0.00382117	Rorc_Nr1d1	ENSMUST00000096441.3|Morc2a|ENSMUSG00000034543.8|microrchidia 2A
mm10_v2_chr9_+_65460926_65460983	0.00200055	Rorc_Nr1d1	ENSMUST00000034955.6|Spg21|ENSMUSG00000032388.6|spastic paraplegia 21 homolog (human)
mm10_v2_chr13_+_6548154_6548174	0.000668665	Rorc_Nr1d1	ENSMUST00000021611.8|Pitrm1|ENSMUSG00000021193.9|pitrilysin metallepetidase 1
