mm10_v2_chr17_-_23684019_23684032	2.50586	Rfx3_Rfx1_Rfx4	ENSMUST00000085989.5|Cldn9|ENSMUSG00000066720.5|claudin 9
mm10_v2_chr16_-_3908596_3908623	2.35442	Rfx3_Rfx1_Rfx4	ENSMUST00000123235.2|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene
mm10_v2_chr16_+_17646564_17646620	1.7441	Rfx3_Rfx1_Rfx4	ENSMUST00000182117.1|Ccdc74a|ENSMUSG00000041617.4|coiled-coil domain containing 74A 	ENSMUST00000182671.1|Ccdc74a|ENSMUSG00000041617.4|coiled-coil domain containing 74A 	ENSMUST00000182344.1|Ccdc74a|ENSMUSG00000041617.4|coiled-coil domain containing 74A
mm10_v2_chr2_-_164745916_164745940	1.73653	Rfx3_Rfx1_Rfx4	ENSMUST00000109328.1|Wfdc3|ENSMUSG00000076434.3|WAP four-disulfide core domain 3 	ENSMUST00000043448.1|Wfdc3|ENSMUSG00000039951.1|WAP four-disulfide core domain 3
mm10_v2_chr12_-_84148449_84148499	1.69122	Rfx3_Rfx1_Rfx4	ENSMUST00000061425.2|Pnma1|ENSMUSG00000054383.2|paraneoplastic antigen MA1
mm10_v2_chr12_+_113185877_113185937	1.61895	Rfx3_Rfx1_Rfx4	ENSMUST00000058491.6|Tmem121|ENSMUSG00000049036.6|transmembrane protein 121
mm10_v2_chr9_+_8544196_8544225	1.60189	Rfx3_Rfx1_Rfx4	ENSMUST00000050433.6|Trpc6|ENSMUSG00000031997.8|transient receptor potential cation channel, subfamily C, member 6
mm10_v2_chr16_+_17646464_17646507	1.58814	Rfx3_Rfx1_Rfx4	ENSMUST00000056962.4|Ccdc74a|ENSMUSG00000041617.4|coiled-coil domain containing 74A
mm10_v2_chr18_+_60925612_60925639	1.53132	Rfx3_Rfx1_Rfx4	ENSMUST00000102888.3|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha 	ENSMUST00000025519.4|Camk2a|ENSMUSG00000024617.10|calcium/calmodulin-dependent protein kinase II alpha
mm10_v2_chr11_-_71033462_71033513	1.50065	Rfx3_Rfx1_Rfx4	ENSMUST00000156068.2|6330403K07Rik|ENSMUSG00000018451.6|RIKEN cDNA 6330403K07 gene
mm10_v2_chr7_+_127091426_127091450	1.49989	Rfx3_Rfx1_Rfx4	ENSMUST00000056288.5|AI467606|ENSMUSG00000045165.5|expressed sequence AI467606
mm10_v2_chr12_+_80518990_80519087	1.48114	Rfx3_Rfx1_Rfx4	ENSMUST00000021558.6|Galnt16|ENSMUSG00000021130.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16
mm10_v2_chr9_+_62858085_62858138	1.45498	Rfx3_Rfx1_Rfx4	ENSMUST00000034777.6|Calml4|ENSMUSG00000032246.7|calmodulin-like 4 	ENSMUST00000163820.1|Calml4|ENSMUSG00000032246.7|calmodulin-like 4
mm10_v2_chr1_-_90153396_90153406	1.44466	Rfx3_Rfx1_Rfx4	ENSMUST00000113094.2|Iqca|ENSMUSG00000026301.9|IQ motif containing with AAA domain
mm10_v2_chr17_+_56304313_56304407	1.39698	Rfx3_Rfx1_Rfx4	ENSMUST00000113035.1|Uhrf1|ENSMUSG00000001228.8|ubiquitin-like, containing PHD and RING finger domains, 1 	ENSMUST00000113039.2|Uhrf1|ENSMUSG00000001228.8|ubiquitin-like, containing PHD and RING finger domains, 1 	ENSMUST00000142387.1|Uhrf1|ENSMUSG00000001228.8|ubiquitin-like, containing PHD and RING finger domains, 1
mm10_v2_chr2_+_28700155_28700187	1.39524	Rfx3_Rfx1_Rfx4	ENSMUST00000074156.6|Ak8|ENSMUSG00000026807.8|adenylate kinase 8
mm10_v2_chr7_-_6730412_6730431	1.38813	Rfx3_Rfx1_Rfx4	ENSMUST00000051209.4|Peg3|ENSMUSG00000002265.9|paternally expressed 3
mm10_v2_chr5_+_33983534_33983548	1.38291	Rfx3_Rfx1_Rfx4	ENSMUST00000114382.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673
mm10_v2_chr6_+_29985317_29985344	1.3549	Rfx3_Rfx1_Rfx4	ENSMUST00000124522.1|1700023L04Rik|ENSMUSG00000045709.10|RIKEN cDNA 1700023L04 gene 	ENSMUST00000141679.1|1700023L04Rik|ENSMUSG00000045709.10|RIKEN cDNA 1700023L04 gene
mm10_v2_chr11_-_6606053_6606053	1.33356	Rfx3_Rfx1_Rfx4	ENSMUST00000045713.3|Nacad|ENSMUSG00000041073.4|NAC alpha domain containing
mm10_v2_chr19_+_47178820_47178997	1.31665	Rfx3_Rfx1_Rfx4	ENSMUST00000111808.3|Neurl1a|ENSMUSG00000006435.9|neuralized homolog 1A (Drosophila)
mm10_v2_chr5_+_33983437_33983529	1.27113	Rfx3_Rfx1_Rfx4	ENSMUST00000114384.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673 	ENSMUST00000094869.5|Gm1673|ENSMUSG00000070858.5|predicted gene 1673 	ENSMUST00000114383.1|Gm1673|ENSMUSG00000070858.5|predicted gene 1673
mm10_v2_chr10_-_79874233_79874439	1.26442	Rfx3_Rfx1_Rfx4	ENSMUST00000166023.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764 	ENSMUST00000167707.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764 	ENSMUST00000165601.1|BC005764|ENSMUSG00000035835.8|cDNA sequence BC005764
mm10_v2_chr15_-_84557776_84557875	1.25855	Rfx3_Rfx1_Rfx4	ENSMUST00000069476.4|Ldoc1l|ENSMUSG00000055745.4|leucine zipper, down-regulated in cancer 1-like
mm10_v2_chr8_+_94984399_94984477	1.23012	Rfx3_Rfx1_Rfx4	ENSMUST00000093271.6|Gpr56|ENSMUSG00000031785.9|G protein-coupled receptor 56
mm10_v2_chr19_+_10001669_10001703	1.22745	Rfx3_Rfx1_Rfx4	ENSMUST00000121418.1|Rab3il1|ENSMUSG00000024663.11|RAB3A interacting protein (rabin3)-like 1
mm10_v2_chr2_-_131160006_131160081	1.22608	Rfx3_Rfx1_Rfx4	ENSMUST00000103188.3|1700037H04Rik|ENSMUSG00000027327.10|RIKEN cDNA 1700037H04 gene 	ENSMUST00000133602.1|1700037H04Rik|ENSMUSG00000027327.10|RIKEN cDNA 1700037H04 gene 	ENSMUST00000028800.5|1700037H04Rik|ENSMUSG00000027327.10|RIKEN cDNA 1700037H04 gene
mm10_v2_chr8_+_95055094_95055126	1.2237	Rfx3_Rfx1_Rfx4	ENSMUST00000058479.6|Ccdc135|ENSMUSG00000031786.6|coiled-coil domain containing 135
mm10_v2_chr9_-_61946768_61946799	1.19928	Rfx3_Rfx1_Rfx4	ENSMUST00000034815.7|Kif23|ENSMUSG00000032254.9|kinesin family member 23
mm10_v2_chr2_+_166792525_166792536	1.19619	Rfx3_Rfx1_Rfx4	ENSMUST00000065753.1|Trp53rk|ENSMUSG00000042854.9|transformation related protein 53 regulating kinase
mm10_v2_chr5_-_114823460_114823475	1.13193	Rfx3_Rfx1_Rfx4	ENSMUST00000140374.1|Gm20499|ENSMUSG00000092252.1|predicted gene 20499 	ENSMUST00000100850.4|2610524H06Rik|ENSMUSG00000092486.1|RIKEN cDNA 2610524H06 gene
mm10_v2_chr2_+_121289589_121289606	1.12831	Rfx3_Rfx1_Rfx4	ENSMUST00000094639.3|Map1a|ENSMUSG00000027254.7|microtubule-associated protein 1 A
mm10_v2_chr19_-_46327121_46327156	1.12183	Rfx3_Rfx1_Rfx4	ENSMUST00000041391.4|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing 	ENSMUST00000096029.5|Psd|ENSMUSG00000037126.9|pleckstrin and Sec7 domain containing
mm10_v2_chr17_+_24696234_24696320	1.11957	Rfx3_Rfx1_Rfx4	ENSMUST00000019464.7|Noxo1|ENSMUSG00000019320.7|NADPH oxidase organizer 1
mm10_v2_chr17_+_46254017_46254165	1.0913	Rfx3_Rfx1_Rfx4	ENSMUST00000095262.4|Lrrc73|ENSMUSG00000071073.4|leucine rich repeat containing 73
mm10_v2_chr3_-_108536466_108536536	1.0758	Rfx3_Rfx1_Rfx4	ENSMUST00000048012.6|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene 	ENSMUST00000106626.2|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene 	ENSMUST00000106625.3|5330417C22Rik|ENSMUSG00000040412.10|RIKEN cDNA 5330417C22 gene
mm10_v2_chr13_+_91461050_91461125	1.06965	Rfx3_Rfx1_Rfx4	ENSMUST00000004094.8|Ssbp2|ENSMUSG00000003992.8|single-stranded DNA binding protein 2 	ENSMUST00000042122.8|Ssbp2|ENSMUSG00000003992.8|single-stranded DNA binding protein 2
mm10_v2_chr7_+_99268338_99268388	1.06647	Rfx3_Rfx1_Rfx4	ENSMUST00000107100.2|Map6|ENSMUSG00000055407.7|microtubule-associated protein 6
mm10_v2_chr12_+_85746539_85746551	1.0544	Rfx3_Rfx1_Rfx4	ENSMUST00000040461.3|Mfsd7c|ENSMUSG00000034258.3|major facilitator superfamily domain containing 7C
mm10_v2_chr5_+_108369858_108369858	1.04969	Rfx3_Rfx1_Rfx4	ENSMUST00000100944.2|Gm10419|ENSMUSG00000072769.2|predicted gene 10419
mm10_v2_chr17_-_8101228_8101228	1.04882	Rfx3_Rfx1_Rfx4	ENSMUST00000097422.4|Gm1604A|ENSMUSG00000094083.1|predicted gene 1604A
mm10_v2_chr10_+_80295930_80296003	1.04401	Rfx3_Rfx1_Rfx4	ENSMUST00000105359.1|Apc2|ENSMUSG00000020135.7|adenomatosis polyposis coli 2
mm10_v2_chr17_-_31277327_31277356	1.03184	Rfx3_Rfx1_Rfx4	ENSMUST00000024832.7|Rsph1|ENSMUSG00000024033.9|radial spoke head 1 homolog (Chlamydomonas)
mm10_v2_chr10_+_42860348_42860377	1.03149	Rfx3_Rfx1_Rfx4	ENSMUST00000063063.7|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr13_+_55464237_55464319	1.02571	Rfx3_Rfx1_Rfx4	ENSMUST00000046533.7|Prr7|ENSMUSG00000034686.7|proline rich 7 (synaptic)
mm10_v2_chr4_-_133967296_133967441	1.02507	Rfx3_Rfx1_Rfx4	ENSMUST00000105893.1|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2
mm10_v2_chr14_-_56102458_56102574	0.993252	Rfx3_Rfx1_Rfx4	ENSMUST00000015583.1|Ctsg|ENSMUSG00000040314.1|cathepsin G
mm10_v2_chr16_+_44394771_44394804	0.984198	Rfx3_Rfx1_Rfx4	ENSMUST00000099742.2|Wdr52|ENSMUSG00000071550.7|WD repeat domain 52
mm10_v2_chr7_-_13054665_13054764	0.972569	Rfx3_Rfx1_Rfx4	ENSMUST00000182515.1|Mzf1|ENSMUSG00000030380.10|myeloid zinc finger 1 	ENSMUST00000069289.8|Mzf1|ENSMUSG00000030380.10|myeloid zinc finger 1
mm10_v2_chrX_+_7919816_7919905	0.964117	Rfx3_Rfx1_Rfx4	ENSMUST00000041096.3|Pcsk1n|ENSMUSG00000039278.10|proprotein convertase subtilisin/kexin type 1 inhibitor
mm10_v2_chr4_-_133967235_133967284	0.954058	Rfx3_Rfx1_Rfx4	ENSMUST00000123234.1|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2
mm10_v2_chr7_+_80186835_80186904	0.947647	Rfx3_Rfx1_Rfx4	ENSMUST00000107383.1|Sema4b|ENSMUSG00000030539.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 	ENSMUST00000032754.7|Sema4b|ENSMUSG00000030539.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
mm10_v2_chr4_-_118620763_118620792	0.941798	Rfx3_Rfx1_Rfx4	ENSMUST00000071972.4|Wdr65|ENSMUSG00000028730.8|WD repeat domain 65
mm10_v2_chr8_-_4259257_4259283	0.931011	Rfx3_Rfx1_Rfx4	ENSMUST00000053252.7|Ctxn1|ENSMUSG00000048644.7|cortexin 1
mm10_v2_chr14_+_60378242_60378292	0.92236	Rfx3_Rfx1_Rfx4	ENSMUST00000022561.6|Amer2|ENSMUSG00000021986.7|APC membrane recruitment 2
mm10_v2_chr4_+_137681663_137681719	0.916898	Rfx3_Rfx1_Rfx4	ENSMUST00000047243.5|Rap1gap|ENSMUSG00000041351.10|Rap1 GTPase-activating protein
mm10_v2_chr11_+_102248842_102248888	0.908764	Rfx3_Rfx1_Rfx4	ENSMUST00000100392.4|BC030867|ENSMUSG00000034773.10|cDNA sequence BC030867
mm10_v2_chr8_+_119575235_119575340	0.899997	Rfx3_Rfx1_Rfx4	ENSMUST00000093100.2|Dnaaf1|ENSMUSG00000031831.6|dynein, axonemal assembly factor 1
mm10_v2_chr2_-_73775341_73775378	0.899809	Rfx3_Rfx1_Rfx4	ENSMUST00000112024.3|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1 	ENSMUST00000166199.1|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1 	ENSMUST00000180045.1|Chn1|ENSMUSG00000056486.11|chimerin (chimaerin) 1
mm10_v2_chr15_-_79062866_79062941	0.893016	Rfx3_Rfx1_Rfx4	ENSMUST00000151889.1|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54 	ENSMUST00000040676.4|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54
mm10_v2_chr2_+_110017806_110017873	0.869124	Rfx3_Rfx1_Rfx4	ENSMUST00000028580.5|Ccdc34|ENSMUSG00000027160.10|coiled-coil domain containing 34
mm10_v2_chr9_+_20652107_20652138	0.862807	Rfx3_Rfx1_Rfx4	ENSMUST00000034689.6|Pin1|ENSMUSG00000032171.6|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1
mm10_v2_chr5_-_114813943_114813976	0.862544	Rfx3_Rfx1_Rfx4	ENSMUST00000061251.5|1500011B03Rik|ENSMUSG00000072694.7|RIKEN cDNA 1500011B03 gene 	ENSMUST00000112160.3|1500011B03Rik|ENSMUSG00000072694.7|RIKEN cDNA 1500011B03 gene
mm10_v2_chr11_-_12026732_12026823	0.858118	Rfx3_Rfx1_Rfx4	ENSMUST00000143915.1|Grb10|ENSMUSG00000020176.11|growth factor receptor bound protein 10
mm10_v2_chr5_+_30711564_30711586	0.852174	Rfx3_Rfx1_Rfx4	ENSMUST00000114729.1|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr11_+_61505138_61505210	0.830453	Rfx3_Rfx1_Rfx4	ENSMUST00000102657.3|B9d1|ENSMUSG00000001039.6|B9 protein domain 1
mm10_v2_chr2_-_30048827_30048891	0.824192	Rfx3_Rfx1_Rfx4	ENSMUST00000113711.2|Wdr34|ENSMUSG00000039715.8|WD repeat domain 34
mm10_v2_chr7_-_4546567_4546567	0.822297	Rfx3_Rfx1_Rfx4	ENSMUST00000065957.5|Syt5|ENSMUSG00000004961.6|synaptotagmin V
mm10_v2_chr19_-_4283033_4283142	0.808105	Rfx3_Rfx1_Rfx4	ENSMUST00000167215.1|Ankrd13d|ENSMUSG00000005986.9|ankyrin repeat domain 13 family, member D 	ENSMUST00000056888.6|Ankrd13d|ENSMUSG00000005986.9|ankyrin repeat domain 13 family, member D
mm10_v2_chr9_-_121277160_121277217	0.802842	Rfx3_Rfx1_Rfx4	ENSMUST00000051479.6|Ulk4|ENSMUSG00000040936.8|unc-51-like kinase 4 	ENSMUST00000171923.1|Ulk4|ENSMUSG00000040936.8|unc-51-like kinase 4
mm10_v2_chr11_-_116077927_116077952	0.799047	Rfx3_Rfx1_Rfx4	ENSMUST00000156545.1|Unc13d|ENSMUSG00000057948.6|unc-13 homolog D (C. elegans)
mm10_v2_chr1_+_20951666_20951717	0.79629	Rfx3_Rfx1_Rfx4	ENSMUST00000038447.4|Efhc1|ENSMUSG00000041809.4|EF-hand domain (C-terminal) containing 1
mm10_v2_chr13_-_100775844_100775899	0.789558	Rfx3_Rfx1_Rfx4	ENSMUST00000075550.3|Cenph|ENSMUSG00000045273.8|centromere protein H
mm10_v2_chr17_+_34604262_34604304	0.789532	Rfx3_Rfx1_Rfx4	ENSMUST00000174041.1|Agpat1|ENSMUSG00000034254.11|1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)
mm10_v2_chr5_+_137758133_137758213	0.785811	Rfx3_Rfx1_Rfx4	ENSMUST00000141733.1|Tsc22d4|ENSMUSG00000029723.10|TSC22 domain family, member 4 	ENSMUST00000110985.1|Tsc22d4|ENSMUSG00000029723.10|TSC22 domain family, member 4
mm10_v2_chr2_+_181219998_181220055	0.783419	Rfx3_Rfx1_Rfx4	ENSMUST00000050026.6|BC051628|ENSMUSG00000047841.8|cDNA sequence BC051628 	ENSMUST00000108835.1|BC051628|ENSMUSG00000047841.8|cDNA sequence BC051628
mm10_v2_chr9_-_60687459_60687672	0.765441	Rfx3_Rfx1_Rfx4	ENSMUST00000114032.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000166168.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000132366.1|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr1_-_60043087_60043175	0.762446	Rfx3_Rfx1_Rfx4	ENSMUST00000027172.6|Ica1l|ENSMUSG00000026018.6|islet cell autoantigen 1-like
mm10_v2_chr8_-_84197667_84197680	0.762048	Rfx3_Rfx1_Rfx4	ENSMUST00000181282.1|Gm26887|ENSMUSG00000097120.1|predicted gene, 26887
mm10_v2_chr10_+_42860648_42860676	0.753661	Rfx3_Rfx1_Rfx4	ENSMUST00000105495.1|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr12_-_110840905_110840950	0.750813	Rfx3_Rfx1_Rfx4	ENSMUST00000177224.1|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30 	ENSMUST00000084974.4|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30 	ENSMUST00000070565.8|Stk30|ENSMUSG00000056458.10|serine/threonine kinase 30
mm10_v2_chr4_-_127330799_127330845	0.734587	Rfx3_Rfx1_Rfx4	ENSMUST00000046532.3|Gjb3|ENSMUSG00000042367.6|gap junction protein, beta 3
mm10_v2_chr3_-_89245159_89245199	0.733869	Rfx3_Rfx1_Rfx4	ENSMUST00000090924.6|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr17_+_35049966_35049966	0.73231	Rfx3_Rfx1_Rfx4	ENSMUST00000007257.9|Clic1|ENSMUSG00000007041.9|chloride intracellular channel 1
mm10_v2_chr1_+_172521044_172521181	0.724692	Rfx3_Rfx1_Rfx4	ENSMUST00000085894.5|Ccdc19|ENSMUSG00000026546.10|coiled-coil domain containing 19 	ENSMUST00000161140.1|Ccdc19|ENSMUSG00000026546.10|coiled-coil domain containing 19 	ENSMUST00000162988.1|Ccdc19|ENSMUSG00000026546.10|coiled-coil domain containing 19
mm10_v2_chr5_-_138172383_138172422	0.718972	Rfx3_Rfx1_Rfx4	ENSMUST00000000505.9|Mcm7|ENSMUSG00000029730.10|minichromosome maintenance deficient 7 (S. cerevisiae)
mm10_v2_chr11_-_116077954_116077979	0.714561	Rfx3_Rfx1_Rfx4	ENSMUST00000106451.1|Unc13d|ENSMUSG00000057948.6|unc-13 homolog D (C. elegans) 	ENSMUST00000075036.2|Unc13d|ENSMUSG00000057948.6|unc-13 homolog D (C. elegans)
mm10_v2_chr13_+_21945084_21945140	0.698662	Rfx3_Rfx1_Rfx4	ENSMUST00000176511.1|Zfp184|ENSMUSG00000006720.10|zinc finger protein 184 (Kruppel-like) 	ENSMUST00000102978.1|Zfp184|ENSMUSG00000006720.10|zinc finger protein 184 (Kruppel-like) 	ENSMUST00000152258.2|Zfp184|ENSMUSG00000006720.10|zinc finger protein 184 (Kruppel-like)
mm10_v2_chr1_+_171767123_171767138	0.697489	Rfx3_Rfx1_Rfx4	ENSMUST00000015460.4|Slamf1|ENSMUSG00000015316.10|signaling lymphocytic activation molecule family member 1
mm10_v2_chr11_+_106374820_106374832	0.696409	Rfx3_Rfx1_Rfx4	ENSMUST00000106816.1|2310007L24Rik|ENSMUSG00000009210.4|RIKEN cDNA 2310007L24 gene
mm10_v2_chr2_-_131174653_131174653	0.692628	Rfx3_Rfx1_Rfx4	ENSMUST00000127987.1|Spef1|ENSMUSG00000027329.3|sperm flagellar 1
mm10_v2_chr3_+_67374116_67374154	0.687428	Rfx3_Rfx1_Rfx4	ENSMUST00000061322.8|Mlf1|ENSMUSG00000048416.9|myeloid leukemia factor 1
mm10_v2_chr6_-_102464667_102464667	0.684829	Rfx3_Rfx1_Rfx4	ENSMUST00000032159.6|Cntn3|ENSMUSG00000030075.8|contactin 3
mm10_v2_chr9_-_27155418_27155425	0.684613	Rfx3_Rfx1_Rfx4	ENSMUST00000167074.1|Jam3|ENSMUSG00000031990.8|junction adhesion molecule 3 	ENSMUST00000034472.8|Jam3|ENSMUSG00000031990.8|junction adhesion molecule 3
mm10_v2_chr3_+_124321031_124321113	0.676084	Rfx3_Rfx1_Rfx4	ENSMUST00000058994.4|Tram1l1|ENSMUSG00000044528.4|translocation associated membrane protein 1-like 1
mm10_v2_chr3_+_67374091_67374102	0.674455	Rfx3_Rfx1_Rfx4	ENSMUST00000077916.5|Mlf1|ENSMUSG00000048416.9|myeloid leukemia factor 1
mm10_v2_chr5_+_124598749_124598798	0.673699	Rfx3_Rfx1_Rfx4	ENSMUST00000130912.1|Tctn2|ENSMUSG00000029386.9|tectonic family member 2 	ENSMUST00000100706.3|Tctn2|ENSMUSG00000029386.9|tectonic family member 2
mm10_v2_chr5_-_136170634_136170661	0.672305	Rfx3_Rfx1_Rfx4	ENSMUST00000041048.1|Orai2|ENSMUSG00000039747.7|ORAI calcium release-activated calcium modulator 2
mm10_v2_chr7_-_13054514_13054514	0.671724	Rfx3_Rfx1_Rfx4	ENSMUST00000182087.1|Mzf1|ENSMUSG00000030380.10|myeloid zinc finger 1
mm10_v2_chr11_-_87359011_87359081	0.671621	Rfx3_Rfx1_Rfx4	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr5_+_77016023_77016054	0.671223	Rfx3_Rfx1_Rfx4	ENSMUST00000031161.4|1700023E05Rik|ENSMUSG00000029248.8|RIKEN cDNA 1700023E05 gene 	ENSMUST00000117880.1|1700023E05Rik|ENSMUSG00000029248.8|RIKEN cDNA 1700023E05 gene
mm10_v2_chr7_+_118855735_118855798	0.655394	Rfx3_Rfx1_Rfx4	ENSMUST00000098087.2|Iqck|ENSMUSG00000073856.4|IQ motif containing K 	ENSMUST00000106547.1|Iqck|ENSMUSG00000073856.4|IQ motif containing K
mm10_v2_chr2_+_110017879_110017962	0.655153	Rfx3_Rfx1_Rfx4	ENSMUST00000150183.2|Ccdc34|ENSMUSG00000027160.10|coiled-coil domain containing 34
mm10_v2_chr5_-_140702241_140702378	0.64972	Rfx3_Rfx1_Rfx4	ENSMUST00000077890.5|Iqce|ENSMUSG00000036555.8|IQ motif containing E 	ENSMUST00000041783.7|Iqce|ENSMUSG00000036555.8|IQ motif containing E 	ENSMUST00000142081.1|Iqce|ENSMUSG00000036555.8|IQ motif containing E
mm10_v2_chr17_+_12119274_12119348	0.646707	Rfx3_Rfx1_Rfx4	ENSMUST00000024594.2|Agpat4|ENSMUSG00000023827.2|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
mm10_v2_chr1_-_156674290_156674356	0.638824	Rfx3_Rfx1_Rfx4	ENSMUST00000079625.4|Tor3a|ENSMUSG00000060519.5|torsin family 3, member A
mm10_v2_chr14_-_49245389_49245441	0.637344	Rfx3_Rfx1_Rfx4	ENSMUST00000130853.1|1700011H14Rik|ENSMUSG00000021850.7|RIKEN cDNA 1700011H14 gene 	ENSMUST00000022398.7|1700011H14Rik|ENSMUSG00000021850.7|RIKEN cDNA 1700011H14 gene
mm10_v2_chrX_+_73123068_73123068	0.634501	Rfx3_Rfx1_Rfx4	ENSMUST00000179117.1|Gm14685|ENSMUSG00000067771.3|predicted gene 14685
mm10_v2_chr11_+_87760533_87760587	0.62857	Rfx3_Rfx1_Rfx4	ENSMUST00000039627.5|Bzrap1|ENSMUSG00000034156.10|benzodiazepine receptor associated protein 1 	ENSMUST00000100644.3|Bzrap1|ENSMUSG00000034156.10|benzodiazepine receptor associated protein 1
mm10_v2_chr17_-_46247968_46248054	0.618676	Rfx3_Rfx1_Rfx4	ENSMUST00000142706.2|Polr1c|ENSMUSG00000067148.9|polymerase (RNA) I polypeptide C 	ENSMUST00000173349.1|Polr1c|ENSMUSG00000067148.9|polymerase (RNA) I polypeptide C 	ENSMUST00000087026.6|Polr1c|ENSMUSG00000067148.9|polymerase (RNA) I polypeptide C
mm10_v2_chr11_-_116077562_116077596	0.612155	Rfx3_Rfx1_Rfx4	ENSMUST00000174822.1|Unc13d|ENSMUSG00000057948.6|unc-13 homolog D (C. elegans)
mm10_v2_chr3_-_55055038_55055055	0.607842	Rfx3_Rfx1_Rfx4	ENSMUST00000029368.2|Ccna1|ENSMUSG00000027793.2|cyclin A1
mm10_v2_chr18_-_77047243_77047279	0.607427	Rfx3_Rfx1_Rfx4	ENSMUST00000137354.1|Katnal2|ENSMUSG00000025420.7|katanin p60 subunit A-like 2 	ENSMUST00000137498.1|Katnal2|ENSMUSG00000025420.7|katanin p60 subunit A-like 2
mm10_v2_chr6_-_122339627_122339708	0.605096	Rfx3_Rfx1_Rfx4	ENSMUST00000161210.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila) 	ENSMUST00000161054.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila) 	ENSMUST00000159252.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila) 	ENSMUST00000161739.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila) 	ENSMUST00000161149.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr11_+_49794157_49794187	0.604241	Rfx3_Rfx1_Rfx4	ENSMUST00000020629.4|Gfpt2|ENSMUSG00000020363.6|glutamine fructose-6-phosphate transaminase 2
mm10_v2_chr11_-_67965631_67965663	0.602512	Rfx3_Rfx1_Rfx4	ENSMUST00000021287.5|Wdr16|ENSMUSG00000020904.5|WD repeat domain 16 	ENSMUST00000126766.1|Wdr16|ENSMUSG00000020904.5|WD repeat domain 16
mm10_v2_chr11_+_43474276_43474340	0.598139	Rfx3_Rfx1_Rfx4	ENSMUST00000173002.1|C1qtnf2|ENSMUSG00000046491.4|C1q and tumor necrosis factor related protein 2 	ENSMUST00000057679.3|C1qtnf2|ENSMUSG00000046491.4|C1q and tumor necrosis factor related protein 2
mm10_v2_chr4_+_126058557_126058613	0.595912	Rfx3_Rfx1_Rfx4	ENSMUST00000035497.4|Oscp1|ENSMUSG00000042616.7|organic solute carrier partner 1
mm10_v2_chr17_-_31855782_31855802	0.59334	Rfx3_Rfx1_Rfx4	ENSMUST00000024839.4|Sik1|ENSMUSG00000024042.6|salt inducible kinase 1
mm10_v2_chr9_+_107547288_107547379	0.58867	Rfx3_Rfx1_Rfx4	ENSMUST00000010188.7|Zmynd10|ENSMUSG00000010044.7|zinc finger, MYND domain containing 10
mm10_v2_chr8_+_69832633_69832712	0.582637	Rfx3_Rfx1_Rfx4	ENSMUST00000131637.2|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4 	ENSMUST00000081503.6|Pbx4|ENSMUSG00000031860.11|pre B cell leukemia homeobox 4
mm10_v2_chr5_-_115300912_115300944	0.581249	Rfx3_Rfx1_Rfx4	ENSMUST00000112090.1|Dynll1|ENSMUSG00000009013.4|dynein light chain LC8-type 1
mm10_v2_chr8_-_84104773_84104793	0.580654	Rfx3_Rfx1_Rfx4	ENSMUST00000041367.7|Dcaf15|ENSMUSG00000037103.7|DDB1 and CUL4 associated factor 15
mm10_v2_chr7_+_126950837_126950966	0.578663	Rfx3_Rfx1_Rfx4	ENSMUST00000106332.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2
mm10_v2_chr8_-_22125030_22125073	0.578535	Rfx3_Rfx1_Rfx4	ENSMUST00000169834.1|Nek5|ENSMUSG00000037738.9|NIMA (never in mitosis gene a)-related expressed kinase 5
mm10_v2_chr7_-_127588595_127588595	0.571216	Rfx3_Rfx1_Rfx4	ENSMUST00000072155.3|Gm166|ENSMUSG00000057176.3|predicted gene 166
mm10_v2_chr11_+_69070790_69070856	0.570601	Rfx3_Rfx1_Rfx4	ENSMUST00000075980.5|Tmem107|ENSMUSG00000020895.8|transmembrane protein 107 	ENSMUST00000094081.4|Tmem107|ENSMUSG00000020895.8|transmembrane protein 107
mm10_v2_chr7_-_140082246_140082301	0.569726	Rfx3_Rfx1_Rfx4	ENSMUST00000166758.2|Caly|ENSMUSG00000025468.8|calcyon neuron-specific vesicular protein
mm10_v2_chr17_+_84626458_84626512	0.569407	Rfx3_Rfx1_Rfx4	ENSMUST00000025101.8|Dync2li1|ENSMUSG00000024253.8|dynein cytoplasmic 2 light intermediate chain 1
mm10_v2_chr6_-_146954399_146954431	0.567163	Rfx3_Rfx1_Rfx4	ENSMUST00000111622.1|1700034J05Rik|ENSMUSG00000040163.8|RIKEN cDNA 1700034J05 gene 	ENSMUST00000036592.8|1700034J05Rik|ENSMUSG00000040163.8|RIKEN cDNA 1700034J05 gene
mm10_v2_chr5_-_115300957_115300999	0.563286	Rfx3_Rfx1_Rfx4	ENSMUST00000009157.3|Dynll1|ENSMUSG00000009013.4|dynein light chain LC8-type 1
mm10_v2_chr15_+_54745702_54745702	0.562433	Rfx3_Rfx1_Rfx4	ENSMUST00000050027.8|Nov|ENSMUSG00000037362.8|nephroblastoma overexpressed gene
mm10_v2_chr7_+_4740111_4740120	0.562116	Rfx3_Rfx1_Rfx4	ENSMUST00000098853.2|Suv420h2|ENSMUSG00000059851.9|suppressor of variegation 4-20 homolog 2 (Drosophila)
mm10_v2_chr7_+_4740178_4740206	0.559315	Rfx3_Rfx1_Rfx4	ENSMUST00000108583.2|Suv420h2|ENSMUSG00000059851.9|suppressor of variegation 4-20 homolog 2 (Drosophila)
mm10_v2_chr11_+_75999912_75999946	0.558385	Rfx3_Rfx1_Rfx4	ENSMUST00000066408.5|1700016K19Rik|ENSMUSG00000053783.5|RIKEN cDNA 1700016K19 gene
mm10_v2_chr9_-_98563580_98563620	0.557459	Rfx3_Rfx1_Rfx4	ENSMUST00000058992.2|4930579K19Rik|ENSMUSG00000051074.2|RIKEN cDNA 4930579K19 gene
mm10_v2_chrX_+_136993147_136993216	0.557301	Rfx3_Rfx1_Rfx4	ENSMUST00000113067.1|Zcchc18|ENSMUSG00000031428.5|zinc finger, CCHC domain containing 18 	ENSMUST00000101227.2|Zcchc18|ENSMUSG00000031428.5|zinc finger, CCHC domain containing 18
mm10_v2_chr7_+_16816299_16816361	0.553963	Rfx3_Rfx1_Rfx4	ENSMUST00000108495.2|Strn4|ENSMUSG00000030374.9|striatin, calmodulin binding protein 4
mm10_v2_chr11_-_3895085_3895104	0.551778	Rfx3_Rfx1_Rfx4	ENSMUST00000020712.4|4921536K21Rik|ENSMUSG00000020434.4|RIKEN cDNA 4921536K21 gene
mm10_v2_chr9_-_8042785_8042882	0.549475	Rfx3_Rfx1_Rfx4	ENSMUST00000065291.1|9230110C19Rik|ENSMUSG00000053070.4|RIKEN cDNA 9230110C19 gene
mm10_v2_chr5_-_115652974_115652992	0.54675	Rfx3_Rfx1_Rfx4	ENSMUST00000121746.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64 	ENSMUST00000118576.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64
mm10_v2_chr8_-_111933761_111933816	0.546412	Rfx3_Rfx1_Rfx4	ENSMUST00000034429.7|Tmem231|ENSMUSG00000031951.7|transmembrane protein 231
mm10_v2_chr7_-_31051431_31051488	0.542442	Rfx3_Rfx1_Rfx4	ENSMUST00000073892.4|Fxyd7|ENSMUSG00000036578.6|FXYD domain-containing ion transport regulator 7
mm10_v2_chr15_-_68258787_68258880	0.54007	Rfx3_Rfx1_Rfx4	ENSMUST00000162173.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing 	ENSMUST00000160248.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing 	ENSMUST00000159430.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing 	ENSMUST00000162054.1|Zfat|ENSMUSG00000022335.10|zinc finger and AT hook domain containing
mm10_v2_chr14_+_77156733_77156823	0.539681	Rfx3_Rfx1_Rfx4	ENSMUST00000022589.7|Enox1|ENSMUSG00000022012.8|ecto-NOX disulfide-thiol exchanger 1
mm10_v2_chr10_+_122678764_122678811	0.538079	Rfx3_Rfx1_Rfx4	ENSMUST00000161487.1|Ppm1h|ENSMUSG00000034613.6|protein phosphatase 1H (PP2C domain containing) 	ENSMUST00000067918.5|Ppm1h|ENSMUSG00000034613.6|protein phosphatase 1H (PP2C domain containing)
mm10_v2_chr4_+_111720187_111720205	0.537624	Rfx3_Rfx1_Rfx4	ENSMUST00000084354.3|Spata6|ENSMUSG00000034401.10|spermatogenesis associated 6
mm10_v2_chr7_+_126950518_126950584	0.537137	Rfx3_Rfx1_Rfx4	ENSMUST00000106335.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2 	ENSMUST00000146017.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2
mm10_v2_chr16_-_16829276_16829349	0.53702	Rfx3_Rfx1_Rfx4	ENSMUST00000023468.5|Spag6|ENSMUSG00000022783.5|sperm associated antigen 6
mm10_v2_chr17_-_80207299_80207308	0.533514	Rfx3_Rfx1_Rfx4	ENSMUST00000063417.9|Srsf7|ENSMUSG00000024097.10|serine/arginine-rich splicing factor 7
mm10_v2_chr8_-_92355764_92355891	0.527496	Rfx3_Rfx1_Rfx4	ENSMUST00000180102.1|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene 	ENSMUST00000179421.1|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene 	ENSMUST00000179222.1|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene 	ENSMUST00000179029.1|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene
mm10_v2_chr3_-_89245005_89245031	0.526738	Rfx3_Rfx1_Rfx4	ENSMUST00000107464.1|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr15_+_79141324_79141358	0.522689	Rfx3_Rfx1_Rfx4	ENSMUST00000040077.6|Polr2f|ENSMUSG00000033020.6|polymerase (RNA) II (DNA directed) polypeptide F
mm10_v2_chr7_-_44748306_44748391	0.522593	Rfx3_Rfx1_Rfx4	ENSMUST00000118162.1|Zfp473|ENSMUSG00000048012.12|zinc finger protein 473 	ENSMUST00000140599.2|Zfp473|ENSMUSG00000048012.12|zinc finger protein 473 	ENSMUST00000120798.1|Zfp473|ENSMUSG00000048012.12|zinc finger protein 473
mm10_v2_chr4_+_111719975_111720047	0.522558	Rfx3_Rfx1_Rfx4	ENSMUST00000038868.7|Spata6|ENSMUSG00000034401.10|spermatogenesis associated 6 	ENSMUST00000070513.6|Spata6|ENSMUSG00000034401.10|spermatogenesis associated 6 	ENSMUST00000153746.1|Spata6|ENSMUSG00000034401.10|spermatogenesis associated 6
mm10_v2_chr15_+_75704280_75704394	0.522148	Rfx3_Rfx1_Rfx4	ENSMUST00000121137.1|Rhpn1|ENSMUSG00000022580.6|rhophilin, Rho GTPase binding protein 1 	ENSMUST00000023244.5|Rhpn1|ENSMUSG00000022580.6|rhophilin, Rho GTPase binding protein 1
mm10_v2_chr9_-_60688118_60688184	0.522033	Rfx3_Rfx1_Rfx4	ENSMUST00000114034.2|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49 	ENSMUST00000065603.5|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr1_-_152766281_152766319	0.520762	Rfx3_Rfx1_Rfx4	ENSMUST00000111859.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1 	ENSMUST00000148865.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr4_-_128962420_128962449	0.520519	Rfx3_Rfx1_Rfx4	ENSMUST00000119354.1|Adc|ENSMUSG00000028789.10|arginine decarboxylase 	ENSMUST00000106068.1|Adc|ENSMUSG00000028789.10|arginine decarboxylase 	ENSMUST00000030581.3|Adc|ENSMUSG00000028789.10|arginine decarboxylase
mm10_v2_chr10_-_68541842_68541908	0.515783	Rfx3_Rfx1_Rfx4	ENSMUST00000020103.2|1700040L02Rik|ENSMUSG00000019945.3|RIKEN cDNA 1700040L02 gene
mm10_v2_chr4_-_138725262_138725267	0.515331	Rfx3_Rfx1_Rfx4	ENSMUST00000105811.2|Ubxn10|ENSMUSG00000043621.7|UBX domain protein 10
mm10_v2_chr8_-_119575143_119575205	0.515327	Rfx3_Rfx1_Rfx4	ENSMUST00000036049.4|Hsdl1|ENSMUSG00000034189.4|hydroxysteroid dehydrogenase like 1
mm10_v2_chr14_-_60197173_60197185	0.515123	Rfx3_Rfx1_Rfx4	ENSMUST00000131670.1|Atp8a2|ENSMUSG00000021983.9|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm10_v2_chr3_-_101287897_101287957	0.513326	Rfx3_Rfx1_Rfx4	ENSMUST00000029456.4|Cd2|ENSMUSG00000027863.8|CD2 antigen
mm10_v2_chr17_-_6655939_6655939	0.510785	Rfx3_Rfx1_Rfx4	ENSMUST00000179554.1|Dynlt1f|ENSMUSG00000095677.1|dynein light chain Tctex-type 1F
mm10_v2_chr6_+_128375456_128375456	0.509243	Rfx3_Rfx1_Rfx4	ENSMUST00000100926.2|4933413G19Rik|ENSMUSG00000079304.3|RIKEN cDNA 4933413G19 gene
mm10_v2_chr18_+_31609512_31609512	0.508246	Rfx3_Rfx1_Rfx4	ENSMUST00000164667.1|B930094E09Rik|ENSMUSG00000092124.1|RIKEN cDNA B930094E09 gene
mm10_v2_chr5_+_30711849_30711905	0.507386	Rfx3_Rfx1_Rfx4	ENSMUST00000088081.4|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5 	ENSMUST00000101442.3|Dpysl5|ENSMUSG00000029168.8|dihydropyrimidinase-like 5
mm10_v2_chr7_+_126950687_126950729	0.506628	Rfx3_Rfx1_Rfx4	ENSMUST00000106333.1|Sez6l2|ENSMUSG00000030683.5|seizure related 6 homolog like 2
mm10_v2_chr4_+_107830958_107830985	0.503705	Rfx3_Rfx1_Rfx4	ENSMUST00000106731.2|Lrp8|ENSMUSG00000028613.8|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
mm10_v2_chrX_+_74837196_74837196	0.503361	Rfx3_Rfx1_Rfx4	ENSMUST00000114116.1|Gm5936|ENSMUSG00000079531.1|predicted gene 5936
mm10_v2_chr12_+_52699297_52699411	0.49929	Rfx3_Rfx1_Rfx4	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr11_-_101551837_101551893	0.495915	Rfx3_Rfx1_Rfx4	ENSMUST00000017290.4|Brca1|ENSMUSG00000017146.6|breast cancer 1
mm10_v2_chr11_-_114795888_114795903	0.491897	Rfx3_Rfx1_Rfx4	ENSMUST00000000206.3|Btbd17|ENSMUSG00000000202.3|BTB (POZ) domain containing 17
mm10_v2_chr4_-_154042660_154042714	0.491385	Rfx3_Rfx1_Rfx4	ENSMUST00000047207.6|Ccdc27|ENSMUSG00000039492.7|coiled-coil domain containing 27
mm10_v2_chr6_+_119175247_119175292	0.491047	Rfx3_Rfx1_Rfx4	ENSMUST00000112777.2|Dcp1b|ENSMUSG00000041477.8|DCP1 decapping enzyme homolog B (S. cerevisiae) 	ENSMUST00000073909.5|Dcp1b|ENSMUSG00000041477.8|DCP1 decapping enzyme homolog B (S. cerevisiae)
mm10_v2_chr17_+_6430112_6430204	0.490018	Rfx3_Rfx1_Rfx4	ENSMUST00000179569.1|Dynlt1b|ENSMUSG00000096255.1|dynein light chain Tctex-type 1B
mm10_v2_chr11_-_118342500_118342569	0.489372	Rfx3_Rfx1_Rfx4	ENSMUST00000103024.3|BC100451|ENSMUSG00000076433.4|cDNA sequence BC100451
mm10_v2_chr10_+_20952547_20952593	0.488651	Rfx3_Rfx1_Rfx4	ENSMUST00000105525.4|Ahi1|ENSMUSG00000019986.10|Abelson helper integration site 1
mm10_v2_chr2_+_153492790_153492790	0.487093	Rfx3_Rfx1_Rfx4	ENSMUST00000109783.1|4930404H24Rik|ENSMUSG00000079001.1|RIKEN cDNA 4930404H24 gene
mm10_v2_chr7_+_4740137_4740175	0.484909	Rfx3_Rfx1_Rfx4	ENSMUST00000130215.1|Suv420h2|ENSMUSG00000059851.9|suppressor of variegation 4-20 homolog 2 (Drosophila) 	ENSMUST00000108582.3|Suv420h2|ENSMUSG00000059851.9|suppressor of variegation 4-20 homolog 2 (Drosophila)
mm10_v2_chr10_+_119992962_119993070	0.4839	Rfx3_Rfx1_Rfx4	ENSMUST00000154238.1|Grip1|ENSMUSG00000034813.10|glutamate receptor interacting protein 1
mm10_v2_chr10_-_39133914_39133927	0.483261	Rfx3_Rfx1_Rfx4	ENSMUST00000135785.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chr19_-_7241216_7241226	0.48125	Rfx3_Rfx1_Rfx4	ENSMUST00000025675.9|Naa40|ENSMUSG00000024764.9|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
mm10_v2_chr16_+_20696175_20696211	0.480756	Rfx3_Rfx1_Rfx4	ENSMUST00000128273.1|Fam131a|ENSMUSG00000050821.7|family with sequence similarity 131, member A
mm10_v2_chr7_+_139212974_139212993	0.479565	Rfx3_Rfx1_Rfx4	ENSMUST00000016124.8|Lrrc27|ENSMUSG00000015980.8|leucine rich repeat containing 27
mm10_v2_chr2_-_21205342_21205371	0.479475	Rfx3_Rfx1_Rfx4	ENSMUST00000027992.2|Enkur|ENSMUSG00000026679.3|enkurin, TRPC channel interacting protein
mm10_v2_chr10_+_119992916_119992958	0.478767	Rfx3_Rfx1_Rfx4	ENSMUST00000105261.2|Grip1|ENSMUSG00000034813.10|glutamate receptor interacting protein 1
mm10_v2_chr3_-_101287879_101287893	0.477568	Rfx3_Rfx1_Rfx4	ENSMUST00000152321.1|Cd2|ENSMUSG00000027863.8|CD2 antigen
mm10_v2_chr11_-_119300070_119300089	0.476444	Rfx3_Rfx1_Rfx4	ENSMUST00000026667.8|Eif4a3|ENSMUSG00000025580.9|eukaryotic translation initiation factor 4A3
mm10_v2_chr7_+_19149722_19149844	0.473278	Rfx3_Rfx1_Rfx4	ENSMUST00000049294.2|Snrpd2|ENSMUSG00000040824.2|small nuclear ribonucleoprotein D2
mm10_v2_chr19_-_10457447_10457557	0.471448	Rfx3_Rfx1_Rfx4	ENSMUST00000171400.2|Lrrc10b|ENSMUSG00000090291.2|leucine rich repeat containing 10B
mm10_v2_chr15_-_79141197_79141268	0.469629	Rfx3_Rfx1_Rfx4	ENSMUST00000169604.1|1700088E04Rik|ENSMUSG00000033029.6|RIKEN cDNA 1700088E04 gene
mm10_v2_chr4_-_152477433_152477549	0.46932	Rfx3_Rfx1_Rfx4	ENSMUST00000159186.1|Kcnab2|ENSMUSG00000028931.5|potassium voltage-gated channel, shaker-related subfamily, beta member 2 	ENSMUST00000162017.1|Kcnab2|ENSMUSG00000028931.5|potassium voltage-gated channel, shaker-related subfamily, beta member 2 	ENSMUST00000030768.2|Kcnab2|ENSMUSG00000028931.5|potassium voltage-gated channel, shaker-related subfamily, beta member 2
mm10_v2_chrX_-_136993027_136993089	0.468715	Rfx3_Rfx1_Rfx4	ENSMUST00000171738.1|Slc25a53|ENSMUSG00000044348.8|solute carrier family 25, member 53 	ENSMUST00000056674.5|Slc25a53|ENSMUSG00000044348.8|solute carrier family 25, member 53 	ENSMUST00000129807.1|Slc25a53|ENSMUSG00000044348.8|solute carrier family 25, member 53
mm10_v2_chr5_+_103425181_103425197	0.467178	Rfx3_Rfx1_Rfx4	ENSMUST00000048957.9|Ptpn13|ENSMUSG00000034573.10|protein tyrosine phosphatase, non-receptor type 13
mm10_v2_chr17_+_6007580_6007624	0.466785	Rfx3_Rfx1_Rfx4	ENSMUST00000115784.1|Synj2|ENSMUSG00000023805.10|synaptojanin 2 	ENSMUST00000115785.1|Synj2|ENSMUSG00000023805.10|synaptojanin 2
mm10_v2_chr17_-_34836869_34836959	0.466165	Rfx3_Rfx1_Rfx4	ENSMUST00000077477.5|Stk19|ENSMUSG00000061207.5|serine/threonine kinase 19
mm10_v2_chr12_-_69790660_69790735	0.465435	Rfx3_Rfx1_Rfx4	ENSMUST00000021377.4|Cdkl1|ENSMUSG00000020990.4|cyclin-dependent kinase-like 1 (CDC2-related kinase)
mm10_v2_chr5_+_111581422_111581422	0.458577	Rfx3_Rfx1_Rfx4	ENSMUST00000064930.3|C130026L21Rik|ENSMUSG00000052848.3|RIKEN cDNA C130026L21 gene
mm10_v2_chr6_-_39557830_39557867	0.458512	Rfx3_Rfx1_Rfx4	ENSMUST00000036877.3|Dennd2a|ENSMUSG00000038456.3|DENN/MADD domain containing 2A 	ENSMUST00000154149.1|Dennd2a|ENSMUSG00000038456.3|DENN/MADD domain containing 2A
mm10_v2_chr15_-_58324161_58324178	0.456654	Rfx3_Rfx1_Rfx4	ENSMUST00000022985.1|Klhl38|ENSMUSG00000022357.2|kelch-like 38
mm10_v2_chr5_+_118027743_118027800	0.454886	Rfx3_Rfx1_Rfx4	ENSMUST00000031304.7|Tesc|ENSMUSG00000029359.7|tescalcin
mm10_v2_chr6_-_72520538_72520650	0.454848	Rfx3_Rfx1_Rfx4	ENSMUST00000089687.4|Sh2d6|ENSMUSG00000052631.8|SH2 domain containing 6 	ENSMUST00000163451.1|Sh2d6|ENSMUSG00000052631.8|SH2 domain containing 6 	ENSMUST00000162561.1|Sh2d6|ENSMUSG00000052631.8|SH2 domain containing 6 	ENSMUST00000159877.1|Sh2d6|ENSMUSG00000052631.8|SH2 domain containing 6
mm10_v2_chr11_+_114668524_114668626	0.451044	Rfx3_Rfx1_Rfx4	ENSMUST00000106602.3|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000077915.3|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000106599.1|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000082092.4|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38
mm10_v2_chr10_-_29699379_29699382	0.449487	Rfx3_Rfx1_Rfx4	ENSMUST00000092620.4|Gm10275|ENSMUSG00000069682.4|predicted pseudogene 10275
mm10_v2_chr2_-_28583189_28583230	0.445371	Rfx3_Rfx1_Rfx4	ENSMUST00000113889.2|Gtf3c5|ENSMUSG00000026816.8|general transcription factor IIIC, polypeptide 5
mm10_v2_chr15_-_98953541_98953560	0.444979	Rfx3_Rfx1_Rfx4	ENSMUST00000097014.5|Tuba1a|ENSMUSG00000072235.5|tubulin, alpha 1A
mm10_v2_chrX_+_136993281_136993308	0.434914	Rfx3_Rfx1_Rfx4	ENSMUST00000033804.4|Zcchc18|ENSMUSG00000031428.5|zinc finger, CCHC domain containing 18
mm10_v2_chr2_+_167932327_167932379	0.43434	Rfx3_Rfx1_Rfx4	ENSMUST00000029053.7|Ptpn1|ENSMUSG00000027540.7|protein tyrosine phosphatase, non-receptor type 1
mm10_v2_chr4_+_128654686_128654738	0.434271	Rfx3_Rfx1_Rfx4	ENSMUST00000030588.6|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila) 	ENSMUST00000136377.1|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila)
mm10_v2_chr1_+_136017967_136018042	0.430863	Rfx3_Rfx1_Rfx4	ENSMUST00000063719.8|Tmem9|ENSMUSG00000026411.11|transmembrane protein 9 	ENSMUST00000118832.1|Tmem9|ENSMUSG00000026411.11|transmembrane protein 9
mm10_v2_chr10_-_39133848_39133912	0.429125	Rfx3_Rfx1_Rfx4	ENSMUST00000134279.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000139743.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000149949.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000124941.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000125042.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000063204.2|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chrX_-_51205773_51205839	0.42328	Rfx3_Rfx1_Rfx4	ENSMUST00000114875.1|Mbnl3|ENSMUSG00000036109.11|muscleblind-like 3 (Drosophila)
mm10_v2_chr4_-_117872520_117872560	0.421072	Rfx3_Rfx1_Rfx4	ENSMUST00000171052.1|Ccdc24|ENSMUSG00000078588.4|coiled-coil domain containing 24 	ENSMUST00000166325.1|Ccdc24|ENSMUSG00000078588.4|coiled-coil domain containing 24 	ENSMUST00000106422.2|Ccdc24|ENSMUSG00000078588.4|coiled-coil domain containing 24
mm10_v2_chr15_+_100761741_100761797	0.418267	Rfx3_Rfx1_Rfx4	ENSMUST00000023776.6|Slc4a8|ENSMUSG00000023032.6|solute carrier family 4 (anion exchanger), member 8
mm10_v2_chr7_+_100495987_100496079	0.416916	Rfx3_Rfx1_Rfx4	ENSMUST00000133044.1|Ucp2|ENSMUSG00000033685.6|uncoupling protein 2 (mitochondrial, proton carrier)
mm10_v2_chr12_-_69198419_69198429	0.413048	Rfx3_Rfx1_Rfx4	ENSMUST00000021356.5|Dnaaf2|ENSMUSG00000020973.7|dynein, axonemal assembly factor 2
mm10_v2_chr11_+_70029742_70029837	0.409338	Rfx3_Rfx1_Rfx4	ENSMUST00000132597.2|Dlg4|ENSMUSG00000020886.10|discs, large homolog 4 (Drosophila)
mm10_v2_chr17_+_46248069_46248139	0.408651	Rfx3_Rfx1_Rfx4	ENSMUST00000095263.3|Yipf3|ENSMUSG00000071074.3|Yip1 domain family, member 3 	ENSMUST00000123311.1|Yipf3|ENSMUSG00000071074.3|Yip1 domain family, member 3
mm10_v2_chr1_+_172482199_172482314	0.408481	Rfx3_Rfx1_Rfx4	ENSMUST00000135267.1|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9 	ENSMUST00000052629.6|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9 	ENSMUST00000111235.2|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9
mm10_v2_chr5_-_129008546_129008596	0.408446	Rfx3_Rfx1_Rfx4	ENSMUST00000031378.7|Stx2|ENSMUSG00000029428.7|syntaxin 2
mm10_v2_chr1_-_133753681_133753857	0.408313	Rfx3_Rfx1_Rfx4	ENSMUST00000125659.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000165602.2|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000048953.7|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr7_+_3290553_3290586	0.40464	Rfx3_Rfx1_Rfx4	ENSMUST00000096744.5|Myadm|ENSMUSG00000068566.6|myeloid-associated differentiation marker
mm10_v2_chr4_+_134102581_134102618	0.403509	Rfx3_Rfx1_Rfx4	ENSMUST00000074690.4|Ubxn11|ENSMUSG00000012126.10|UBX domain protein 11 	ENSMUST00000070246.2|Ubxn11|ENSMUSG00000012126.10|UBX domain protein 11 	ENSMUST00000156750.1|Ubxn11|ENSMUSG00000012126.10|UBX domain protein 11
mm10_v2_chr2_-_118703963_118703963	0.401849	Rfx3_Rfx1_Rfx4	ENSMUST00000104937.1|Ankrd63|ENSMUSG00000078137.1|ankyrin repeat domain 63
mm10_v2_chr8_+_110266960_110266982	0.399636	Rfx3_Rfx1_Rfx4	ENSMUST00000043141.6|Hydin|ENSMUSG00000059854.7|HYDIN, axonemal central pair apparatus protein
mm10_v2_chr7_-_45830776_45830944	0.397926	Rfx3_Rfx1_Rfx4	ENSMUST00000107723.2|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1 	ENSMUST00000131384.1|Grwd1|ENSMUSG00000053801.10|glutamate-rich WD repeat containing 1
mm10_v2_chr16_-_93603803_93603815	0.397107	Rfx3_Rfx1_Rfx4	ENSMUST00000023669.5|Setd4|ENSMUSG00000022948.8|SET domain containing 4 	ENSMUST00000113951.2|Setd4|ENSMUSG00000022948.8|SET domain containing 4
mm10_v2_chr7_+_16738410_16738476	0.396779	Rfx3_Rfx1_Rfx4	ENSMUST00000086112.6|Ap2s1|ENSMUSG00000008036.10|adaptor-related protein complex 2, sigma 1 subunit
mm10_v2_chr2_+_118926496_118926554	0.394532	Rfx3_Rfx1_Rfx4	ENSMUST00000099546.4|Chst14|ENSMUSG00000074916.4|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 	ENSMUST00000110837.1|Chst14|ENSMUSG00000074916.4|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
mm10_v2_chr2_+_164460945_164461018	0.394483	Rfx3_Rfx1_Rfx4	ENSMUST00000072452.4|Sys1|ENSMUSG00000045503.10|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm10_v2_chr12_-_32061221_32061301	0.393028	Rfx3_Rfx1_Rfx4	ENSMUST00000003079.5|Prkar2b|ENSMUSG00000002997.9|protein kinase, cAMP dependent regulatory, type II beta 	ENSMUST00000036497.9|Prkar2b|ENSMUSG00000002997.9|protein kinase, cAMP dependent regulatory, type II beta
mm10_v2_chr12_+_29528382_29528468	0.391734	Rfx3_Rfx1_Rfx4	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr3_-_127225847_127225915	0.38934	Rfx3_Rfx1_Rfx4	ENSMUST00000182726.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182779.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr1_+_136018062_136018068	0.388487	Rfx3_Rfx1_Rfx4	ENSMUST00000117950.1|Tmem9|ENSMUSG00000026411.11|transmembrane protein 9
mm10_v2_chr7_-_67803489_67803532	0.387359	Rfx3_Rfx1_Rfx4	ENSMUST00000181235.1|4833412C05Rik|ENSMUSG00000097697.1|RIKEN cDNA 4833412C05 gene
mm10_v2_chr3_-_126998408_126998463	0.386495	Rfx3_Rfx1_Rfx4	ENSMUST00000182764.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000044443.8|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr18_-_35662180_35662195	0.386307	Rfx3_Rfx1_Rfx4	ENSMUST00000025209.4|Spata24|ENSMUSG00000024352.5|spermatogenesis associated 24 	ENSMUST00000096573.2|Spata24|ENSMUSG00000024352.5|spermatogenesis associated 24
mm10_v2_chr19_+_6061176_6061235	0.385383	Rfx3_Rfx1_Rfx4	ENSMUST00000162726.3|Znhit2|ENSMUSG00000075227.5|zinc finger, HIT domain containing 2
mm10_v2_chr19_-_10577362_10577407	0.38413	Rfx3_Rfx1_Rfx4	ENSMUST00000025568.2|Tmem138|ENSMUSG00000024666.5|transmembrane protein 138
mm10_v2_chr12_+_84361968_84362018	0.384101	Rfx3_Rfx1_Rfx4	ENSMUST00000021661.6|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr6_-_113740675_113740743	0.382367	Rfx3_Rfx1_Rfx4	ENSMUST00000032440.4|Sec13|ENSMUSG00000030298.4|SEC13 homolog (S. cerevisiae)
mm10_v2_chr11_-_72361837_72361899	0.374352	Rfx3_Rfx1_Rfx4	ENSMUST00000108503.2|Tekt1|ENSMUSG00000020799.10|tektin 1
mm10_v2_chr18_-_78206408_78206440	0.373995	Rfx3_Rfx1_Rfx4	ENSMUST00000163367.1|Slc14a2|ENSMUSG00000024552.9|solute carrier family 14 (urea transporter), member 2
mm10_v2_chr19_-_10304867_10304954	0.36941	Rfx3_Rfx1_Rfx4	ENSMUST00000039327.4|Dagla|ENSMUSG00000035735.4|diacylglycerol lipase, alpha
mm10_v2_chr3_+_105870858_105870895	0.36935	Rfx3_Rfx1_Rfx4	ENSMUST00000164730.1|Adora3|ENSMUSG00000000562.4|adenosine A3 receptor
mm10_v2_chr10_-_13868932_13869004	0.367161	Rfx3_Rfx1_Rfx4	ENSMUST00000019942.5|Aig1|ENSMUSG00000019806.7|androgen-induced 1 	ENSMUST00000162610.1|Aig1|ENSMUSG00000019806.7|androgen-induced 1
mm10_v2_chr8_-_105827190_105827350	0.366527	Rfx3_Rfx1_Rfx4	ENSMUST00000041400.5|Ranbp10|ENSMUSG00000037415.5|RAN binding protein 10
mm10_v2_chr2_+_163658370_163658510	0.364327	Rfx3_Rfx1_Rfx4	ENSMUST00000164399.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000064703.6|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000099105.2|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000152418.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000126182.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma 	ENSMUST00000131228.1|Pkig|ENSMUSG00000035268.8|protein kinase inhibitor, gamma
mm10_v2_chr8_-_123212742_123212779	0.363588	Rfx3_Rfx1_Rfx4	ENSMUST00000000759.8|Chmp1a|ENSMUSG00000000743.8|charged multivesicular body protein 1A
mm10_v2_chr2_+_109280738_109280798	0.36333	Rfx3_Rfx1_Rfx4	ENSMUST00000028527.7|Kif18a|ENSMUSG00000027115.8|kinesin family member 18A
mm10_v2_chr1_+_66386968_66386999	0.360091	Rfx3_Rfx1_Rfx4	ENSMUST00000145419.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr5_-_142550965_142551110	0.358949	Rfx3_Rfx1_Rfx4	ENSMUST00000129212.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000110785.1|Radil|ENSMUSG00000029576.11|Ras association and DIL domains 	ENSMUST00000063635.8|Radil|ENSMUSG00000029576.11|Ras association and DIL domains
mm10_v2_chr4_+_135495979_135496016	0.358747	Rfx3_Rfx1_Rfx4	ENSMUST00000063707.2|Stpg1|ENSMUSG00000028801.8|sperm tail PG rich repeat containing 1
mm10_v2_chr16_+_49699198_49699304	0.357207	Rfx3_Rfx1_Rfx4	ENSMUST00000046777.4|Ift57|ENSMUSG00000032965.4|intraflagellar transport 57 	ENSMUST00000142682.1|Ift57|ENSMUSG00000032965.4|intraflagellar transport 57
mm10_v2_chr7_+_16944645_16944720	0.355468	Rfx3_Rfx1_Rfx4	ENSMUST00000094807.5|Pnmal2|ENSMUSG00000070802.5|PNMA-like 2
mm10_v2_chr1_+_191821444_191821489	0.355279	Rfx3_Rfx1_Rfx4	ENSMUST00000027931.7|Nek2|ENSMUSG00000026622.9|NIMA (never in mitosis gene a)-related expressed kinase 2
mm10_v2_chr11_+_46235460_46235531	0.353023	Rfx3_Rfx1_Rfx4	ENSMUST00000060185.2|Fndc9|ENSMUSG00000048721.2|fibronectin type III domain containing 9
mm10_v2_chr1_-_128592284_128592307	0.352966	Rfx3_Rfx1_Rfx4	ENSMUST00000052172.6|Cxcr4|ENSMUSG00000045382.6|chemokine (C-X-C motif) receptor 4 	ENSMUST00000142893.1|Cxcr4|ENSMUSG00000045382.6|chemokine (C-X-C motif) receptor 4
mm10_v2_chr8_+_105827721_105827751	0.35095	Rfx3_Rfx1_Rfx4	ENSMUST00000034365.4|Tsnaxip1|ENSMUSG00000031893.6|translin-associated factor X (Tsnax) interacting protein 1
mm10_v2_chr15_+_78428650_78428671	0.350185	Rfx3_Rfx1_Rfx4	ENSMUST00000159771.1|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17
mm10_v2_chr7_+_127588698_127588725	0.349717	Rfx3_Rfx1_Rfx4	ENSMUST00000033088.6|Rnf40|ENSMUSG00000030816.7|ring finger protein 40
mm10_v2_chr8_+_120488416_120488490	0.348532	Rfx3_Rfx1_Rfx4	ENSMUST00000034279.9|Gse1|ENSMUSG00000031822.12|genetic suppressor element 1
mm10_v2_chr4_+_117550326_117550409	0.347385	Rfx3_Rfx1_Rfx4	ENSMUST00000037127.8|Eri3|ENSMUSG00000033423.10|exoribonuclease 3
mm10_v2_chr16_+_96235801_96235801	0.347173	Rfx3_Rfx1_Rfx4	ENSMUST00000113800.2|B3galt5|ENSMUSG00000074892.3|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
mm10_v2_chr13_-_97747373_97747384	0.346668	Rfx3_Rfx1_Rfx4	ENSMUST00000123535.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr10_+_77259280_77259348	0.34466	Rfx3_Rfx1_Rfx4	ENSMUST00000020493.7|Pofut2|ENSMUSG00000020260.8|protein O-fucosyltransferase 2
mm10_v2_chr17_+_33555719_33555796	0.341294	Rfx3_Rfx1_Rfx4	ENSMUST00000087605.5|Myo1f|ENSMUSG00000024300.10|myosin IF 	ENSMUST00000174695.1|Myo1f|ENSMUSG00000024300.10|myosin IF
mm10_v2_chr9_-_124424154_124424154	0.340038	Rfx3_Rfx1_Rfx4	ENSMUST00000180270.1|Ppp2r3d|ENSMUSG00000093803.1|protein phosphatase 2 (formerly 2A), regulatory subunit B'', delta
mm10_v2_chr2_+_163017354_163017513	0.339221	Rfx3_Rfx1_Rfx4	ENSMUST00000018002.6|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52 	ENSMUST00000150396.1|Ift52|ENSMUSG00000017858.6|intraflagellar transport 52
mm10_v2_chr14_-_54253907_54253920	0.338676	Rfx3_Rfx1_Rfx4	ENSMUST00000128231.1|Dad1|ENSMUSG00000022174.8|defender against cell death 1
mm10_v2_chr18_+_74283090_74283131	0.338186	Rfx3_Rfx1_Rfx4	ENSMUST00000114895.3|Ccdc11|ENSMUSG00000035394.5|coiled-coil domain containing 11
mm10_v2_chr7_+_25681158_25681158	0.33641	Rfx3_Rfx1_Rfx4	ENSMUST00000108403.3|B9d2|ENSMUSG00000063439.6|B9 protein domain 2
mm10_v2_chr2_-_168601620_168601657	0.334818	Rfx3_Rfx1_Rfx4	ENSMUST00000171689.1|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 	ENSMUST00000137451.1|Nfatc2|ENSMUSG00000027544.10|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2
mm10_v2_chr10_-_75764265_75764359	0.332793	Rfx3_Rfx1_Rfx4	ENSMUST00000001712.6|Cabin1|ENSMUSG00000020196.9|calcineurin binding protein 1
mm10_v2_chr4_+_138725282_138725325	0.331691	Rfx3_Rfx1_Rfx4	ENSMUST00000030530.4|Pla2g2c|ENSMUSG00000028750.6|phospholipase A2, group IIC 	ENSMUST00000124660.1|Pla2g2c|ENSMUSG00000028750.6|phospholipase A2, group IIC
mm10_v2_chrX_-_74645635_74645635	0.329087	Rfx3_Rfx1_Rfx4	ENSMUST00000114119.1|Gm5640|ENSMUSG00000079534.1|predicted gene 5640
mm10_v2_chr10_+_60399726_60399772	0.328256	Rfx3_Rfx1_Rfx4	ENSMUST00000164428.1|Gm17455|ENSMUSG00000090439.1|predicted gene, 17455
mm10_v2_chr10_-_13868779_13868874	0.326715	Rfx3_Rfx1_Rfx4	ENSMUST00000105534.3|Aig1|ENSMUSG00000019806.7|androgen-induced 1
mm10_v2_chr3_-_127225917_127225959	0.326683	Rfx3_Rfx1_Rfx4	ENSMUST00000182064.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182662.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr9_+_108508005_108508076	0.322494	Rfx3_Rfx1_Rfx4	ENSMUST00000006838.8|Qars|ENSMUSG00000032604.8|glutaminyl-tRNA synthetase 	ENSMUST00000134939.1|Qars|ENSMUSG00000032604.8|glutaminyl-tRNA synthetase
mm10_v2_chr7_+_3390629_3390707	0.321487	Rfx3_Rfx1_Rfx4	ENSMUST00000182222.1|Cacng8|ENSMUSG00000053395.9|calcium channel, voltage-dependent, gamma subunit 8
mm10_v2_chr12_+_84361636_84361657	0.318317	Rfx3_Rfx1_Rfx4	ENSMUST00000110276.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr19_-_42086338_42086375	0.317858	Rfx3_Rfx1_Rfx4	ENSMUST00000051772.8|Morn4|ENSMUSG00000049670.8|MORN repeat containing 4
mm10_v2_chr12_-_83439910_83439934	0.316645	Rfx3_Rfx1_Rfx4	ENSMUST00000177801.1|Dpf3|ENSMUSG00000021221.9|D4, zinc and double PHD fingers, family 3
mm10_v2_chr4_-_141874879_141874953	0.315555	Rfx3_Rfx1_Rfx4	ENSMUST00000036854.3|Efhd2|ENSMUSG00000040659.3|EF hand domain containing 2
mm10_v2_chr5_-_137530990_137531049	0.315274	Rfx3_Rfx1_Rfx4	ENSMUST00000132525.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr7_+_139213239_139213304	0.315236	Rfx3_Rfx1_Rfx4	ENSMUST00000106104.1|Lrrc27|ENSMUSG00000015980.8|leucine rich repeat containing 27
mm10_v2_chr1_+_161142706_161142767	0.31307	Rfx3_Rfx1_Rfx4	ENSMUST00000111608.1|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45 	ENSMUST00000052245.8|Ankrd45|ENSMUSG00000044835.9|ankyrin repeat domain 45
mm10_v2_chr11_-_14179040_14179081	0.311278	Rfx3_Rfx1_Rfx4	ENSMUST00000126260.1|4930554G24Rik|ENSMUSG00000085452.1|RIKEN cDNA 4930554G24 gene
mm10_v2_chr7_-_140082489_140082556	0.307594	Rfx3_Rfx1_Rfx4	ENSMUST00000026541.7|Caly|ENSMUSG00000025468.8|calcyon neuron-specific vesicular protein
mm10_v2_chr11_-_119300004_119300034	0.306736	Rfx3_Rfx1_Rfx4	ENSMUST00000106253.1|Eif4a3|ENSMUSG00000025580.9|eukaryotic translation initiation factor 4A3
mm10_v2_chr2_-_167492826_167492891	0.305551	Rfx3_Rfx1_Rfx4	ENSMUST00000109211.2|Spata2|ENSMUSG00000047030.9|spermatogenesis associated 2 	ENSMUST00000057627.9|Spata2|ENSMUSG00000047030.9|spermatogenesis associated 2
mm10_v2_chr4_+_105790534_105790534	0.305164	Rfx3_Rfx1_Rfx4	ENSMUST00000185012.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr6_+_38433913_38433965	0.30307	Rfx3_Rfx1_Rfx4	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr19_-_10556198_10556275	0.299738	Rfx3_Rfx1_Rfx4	ENSMUST00000025569.2|Tmem216|ENSMUSG00000024667.5|transmembrane protein 216
mm10_v2_chr2_-_131175201_131175201	0.299007	Rfx3_Rfx1_Rfx4	ENSMUST00000110218.2|Spef1|ENSMUSG00000027329.3|sperm flagellar 1
mm10_v2_chr10_+_83722865_83722947	0.298242	Rfx3_Rfx1_Rfx4	ENSMUST00000150459.1|1500009L16Rik|ENSMUSG00000087651.2|RIKEN cDNA 1500009L16 gene
mm10_v2_chr9_+_122951051_122951106	0.297087	Rfx3_Rfx1_Rfx4	ENSMUST00000040717.5|Kif15|ENSMUSG00000036768.5|kinesin family member 15
mm10_v2_chr7_-_44748617_44748617	0.296898	Rfx3_Rfx1_Rfx4	ENSMUST00000060270.6|Zfp473|ENSMUSG00000048012.12|zinc finger protein 473
mm10_v2_chr19_+_6276725_6276792	0.296891	Rfx3_Rfx1_Rfx4	ENSMUST00000025684.3|Ehd1|ENSMUSG00000024772.9|EH-domain containing 1
mm10_v2_chr3_+_105870898_105870912	0.295299	Rfx3_Rfx1_Rfx4	ENSMUST00000010279.5|Adora3|ENSMUSG00000074344.2|adenosine A3 receptor
mm10_v2_chr3_+_130068390_130068412	0.291551	Rfx3_Rfx1_Rfx4	ENSMUST00000076703.6|Gm9396|ENSMUSG00000063328.6|predicted gene 9396
mm10_v2_chr1_+_59119822_59119861	0.291165	Rfx3_Rfx1_Rfx4	ENSMUST00000180570.1|G730003C15Rik|ENSMUSG00000097573.1|RIKEN cDNA G730003C15 gene
mm10_v2_chr14_-_118735143_118735160	0.289525	Rfx3_Rfx1_Rfx4	ENSMUST00000184172.1|RP24-241I19.1|ENSMUSG00000098630.1|RP24-241I19.1
mm10_v2_chr6_-_126921804_126921839	0.286907	Rfx3_Rfx1_Rfx4	ENSMUST00000078521.5|Dyrk4|ENSMUSG00000030345.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
mm10_v2_chr1_-_152766323_152766352	0.286624	Rfx3_Rfx1_Rfx4	ENSMUST00000111857.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr17_-_57011271_57011326	0.284408	Rfx3_Rfx1_Rfx4	ENSMUST00000002733.6|Gtf2f1|ENSMUSG00000002658.9|general transcription factor IIF, polypeptide 1
mm10_v2_chr7_-_80901220_80901269	0.283818	Rfx3_Rfx1_Rfx4	ENSMUST00000146402.1|Wdr73|ENSMUSG00000025722.10|WD repeat domain 73 	ENSMUST00000026816.8|Wdr73|ENSMUSG00000025722.10|WD repeat domain 73
mm10_v2_chr18_-_77047282_77047313	0.282862	Rfx3_Rfx1_Rfx4	ENSMUST00000154665.1|Katnal2|ENSMUSG00000025420.7|katanin p60 subunit A-like 2 	ENSMUST00000026486.6|Katnal2|ENSMUSG00000025420.7|katanin p60 subunit A-like 2 	ENSMUST00000123650.1|Katnal2|ENSMUSG00000025420.7|katanin p60 subunit A-like 2 	ENSMUST00000126153.1|Katnal2|ENSMUSG00000025420.7|katanin p60 subunit A-like 2
mm10_v2_chr17_+_70929006_70929058	0.282374	Rfx3_Rfx1_Rfx4	ENSMUST00000092011.6|Gm16519|ENSMUSG00000066983.6|predicted gene, 16519
mm10_v2_chr13_+_55369732_55369766	0.28027	Rfx3_Rfx1_Rfx4	ENSMUST00000063771.7|Rgs14|ENSMUSG00000052087.7|regulator of G-protein signaling 14
mm10_v2_chr4_-_135573623_135573643	0.280068	Rfx3_Rfx1_Rfx4	ENSMUST00000105855.1|Grhl3|ENSMUSG00000037188.7|grainyhead-like 3 (Drosophila)
mm10_v2_chr7_+_139213003_139213016	0.277811	Rfx3_Rfx1_Rfx4	ENSMUST00000156768.1|Lrrc27|ENSMUSG00000015980.8|leucine rich repeat containing 27
mm10_v2_chr17_-_35704000_35704139	0.27738	Rfx3_Rfx1_Rfx4	ENSMUST00000097333.3|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1 	ENSMUST00000003628.6|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1
mm10_v2_chr9_-_109059711_109059771	0.277006	Rfx3_Rfx1_Rfx4	ENSMUST00000061973.4|Trex1|ENSMUSG00000049734.8|three prime repair exonuclease 1
mm10_v2_chr1_-_87510306_87510373	0.275523	Rfx3_Rfx1_Rfx4	ENSMUST00000027477.8|Ngef|ENSMUSG00000026259.8|neuronal guanine nucleotide exchange factor
mm10_v2_chr5_+_136987019_136987019	0.275356	Rfx3_Rfx1_Rfx4	ENSMUST00000004968.4|Plod3|ENSMUSG00000004846.4|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
mm10_v2_chr5_-_129008494_129008537	0.275132	Rfx3_Rfx1_Rfx4	ENSMUST00000100680.3|Stx2|ENSMUSG00000029428.7|syntaxin 2
mm10_v2_chr1_-_133801031_133801041	0.274388	Rfx3_Rfx1_Rfx4	ENSMUST00000143567.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr9_+_65460926_65460983	0.26986	Rfx3_Rfx1_Rfx4	ENSMUST00000034955.6|Spg21|ENSMUSG00000032388.6|spastic paraplegia 21 homolog (human)
mm10_v2_chr4_-_43429071_43429089	0.268595	Rfx3_Rfx1_Rfx4	ENSMUST00000107929.3|Fam166b|ENSMUSG00000042788.6|family with sequence similarity 166, member B 	ENSMUST00000107928.2|Fam166b|ENSMUSG00000042788.6|family with sequence similarity 166, member B
mm10_v2_chr7_-_4532419_4532470	0.267299	Rfx3_Rfx1_Rfx4	ENSMUST00000094897.4|Dnaaf3|ENSMUSG00000055809.7|dynein, axonemal assembly factor 3
mm10_v2_chr17_+_28142267_28142321	0.266172	Rfx3_Rfx1_Rfx4	ENSMUST00000043503.3|Scube3|ENSMUSG00000038677.7|signal peptide, CUB domain, EGF-like 3
mm10_v2_chr19_+_10577439_10577461	0.265784	Rfx3_Rfx1_Rfx4	ENSMUST00000168445.1|Cyb561a3|ENSMUSG00000034445.7|cytochrome b561 family, member A3
mm10_v2_chrX_-_102071188_102071204	0.265468	Rfx3_Rfx1_Rfx4	ENSMUST00000113631.1|Rgag4|ENSMUSG00000049191.6|retrotransposon gag domain containing 4
mm10_v2_chr8_+_123332676_123332740	0.264664	Rfx3_Rfx1_Rfx4	ENSMUST00000010298.6|Spire2|ENSMUSG00000010154.6|spire homolog 2 (Drosophila)
mm10_v2_chr2_-_79428891_79428990	0.264099	Rfx3_Rfx1_Rfx4	ENSMUST00000143974.1|Cerkl|ENSMUSG00000075256.3|ceramide kinase-like
mm10_v2_chr11_+_119229092_119229131	0.262819	Rfx3_Rfx1_Rfx4	ENSMUST00000053440.7|Ccdc40|ENSMUSG00000039963.12|coiled-coil domain containing 40
mm10_v2_chr1_-_93160870_93160955	0.262024	Rfx3_Rfx1_Rfx4	ENSMUST00000143419.1|2310007B03Rik|ENSMUSG00000034159.6|RIKEN cDNA 2310007B03 gene 	ENSMUST00000043718.5|2310007B03Rik|ENSMUSG00000034159.6|RIKEN cDNA 2310007B03 gene
mm10_v2_chr11_-_69413675_69413675	0.261139	Rfx3_Rfx1_Rfx4	ENSMUST00000094077.4|Kdm6b|ENSMUSG00000018476.7|KDM1 lysine (K)-specific demethylase 6B
mm10_v2_chr7_+_6172482_6172531	0.260953	Rfx3_Rfx1_Rfx4	ENSMUST00000108567.1|Zfp444|ENSMUSG00000044876.8|zinc finger protein 444 	ENSMUST00000054680.5|Zfp444|ENSMUSG00000044876.8|zinc finger protein 444 	ENSMUST00000108566.1|Zfp444|ENSMUSG00000044876.8|zinc finger protein 444
mm10_v2_chr17_+_35979851_35979924	0.260941	Rfx3_Rfx1_Rfx4	ENSMUST00000087200.3|Gnl1|ENSMUSG00000024429.9|guanine nucleotide binding protein-like 1
mm10_v2_chr12_+_21417872_21417911	0.25937	Rfx3_Rfx1_Rfx4	ENSMUST00000180671.1|Gm4419|ENSMUSG00000097055.1|predicted gene 4419
mm10_v2_chr2_+_36049453_36049507	0.258975	Rfx3_Rfx1_Rfx4	ENSMUST00000028256.4|Morn5|ENSMUSG00000026894.4|MORN repeat containing 5
mm10_v2_chr7_-_44553901_44553955	0.257855	Rfx3_Rfx1_Rfx4	ENSMUST00000107910.1|Nr1h2|ENSMUSG00000060601.6|nuclear receptor subfamily 1, group H, member 2 	ENSMUST00000167197.1|Nr1h2|ENSMUSG00000060601.6|nuclear receptor subfamily 1, group H, member 2 	ENSMUST00000107911.1|Nr1h2|ENSMUSG00000060601.6|nuclear receptor subfamily 1, group H, member 2 	ENSMUST00000073488.5|Nr1h2|ENSMUSG00000060601.6|nuclear receptor subfamily 1, group H, member 2
mm10_v2_chr4_+_110397661_110397708	0.256851	Rfx3_Rfx1_Rfx4	ENSMUST00000106589.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106587.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106591.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000106592.1|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr9_+_22003035_22003046	0.256295	Rfx3_Rfx1_Rfx4	ENSMUST00000115331.2|Prkcsh|ENSMUSG00000003402.7|protein kinase C substrate 80K-H 	ENSMUST00000003493.7|Prkcsh|ENSMUSG00000003402.7|protein kinase C substrate 80K-H
mm10_v2_chr19_-_41802028_41802084	0.2557	Rfx3_Rfx1_Rfx4	ENSMUST00000026150.8|Arhgap19|ENSMUSG00000025154.8|Rho GTPase activating protein 19 	ENSMUST00000177495.1|Arhgap19|ENSMUSG00000025154.8|Rho GTPase activating protein 19 	ENSMUST00000163265.1|Arhgap19|ENSMUSG00000025154.8|Rho GTPase activating protein 19
mm10_v2_chr6_+_119479668_119479795	0.255447	Rfx3_Rfx1_Rfx4	ENSMUST00000032094.5|Fbxl14|ENSMUSG00000030019.5|F-box and leucine-rich repeat protein 14
mm10_v2_chr15_+_102331700_102331777	0.254164	Rfx3_Rfx1_Rfx4	ENSMUST00000113682.2|Myg1|ENSMUSG00000001285.6|melanocyte proliferating gene 1 	ENSMUST00000001331.6|Myg1|ENSMUSG00000001285.6|melanocyte proliferating gene 1 	ENSMUST00000171244.1|Myg1|ENSMUSG00000001285.6|melanocyte proliferating gene 1
mm10_v2_chr5_+_135725713_135725740	0.252687	Rfx3_Rfx1_Rfx4	ENSMUST00000127096.1|Por|ENSMUSG00000005514.8|P450 (cytochrome) oxidoreductase
mm10_v2_chr7_-_28598140_28598185	0.25124	Rfx3_Rfx1_Rfx4	ENSMUST00000040531.8|Samd4b|ENSMUSG00000037513.9|sterile alpha motif domain containing 4B 	ENSMUST00000108283.1|Pak4|ENSMUSG00000030602.6|p21 protein (Cdc42/Rac)-activated kinase 4
mm10_v2_chr2_+_164745979_164746025	0.247418	Rfx3_Rfx1_Rfx4	ENSMUST00000017443.7|Dnttip1|ENSMUSG00000017299.7|deoxynucleotidyltransferase, terminal, interacting protein 1 	ENSMUST00000109326.3|Dnttip1|ENSMUSG00000017299.7|deoxynucleotidyltransferase, terminal, interacting protein 1
mm10_v2_chr6_+_115853470_115853598	0.24682	Rfx3_Rfx1_Rfx4	ENSMUST00000112925.1|Ift122|ENSMUSG00000030323.7|intraflagellar transport 122 	ENSMUST00000112923.1|Ift122|ENSMUSG00000030323.7|intraflagellar transport 122 	ENSMUST00000038234.6|Ift122|ENSMUSG00000030323.7|intraflagellar transport 122
mm10_v2_chrX_-_49788204_49788243	0.24585	Rfx3_Rfx1_Rfx4	ENSMUST00000114893.1|Igsf1|ENSMUSG00000031111.10|immunoglobulin superfamily, member 1
mm10_v2_chr7_-_98145472_98145502	0.245018	Rfx3_Rfx1_Rfx4	ENSMUST00000098281.2|Omp|ENSMUSG00000074006.2|olfactory marker protein
mm10_v2_chr10_+_81070035_81070121	0.244943	Rfx3_Rfx1_Rfx4	ENSMUST00000005057.6|Thop1|ENSMUSG00000004929.6|thimet oligopeptidase 1
mm10_v2_chr2_-_91444622_91444726	0.244821	Rfx3_Rfx1_Rfx4	ENSMUST00000064652.7|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene 	ENSMUST00000102594.4|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene 	ENSMUST00000094835.2|1110051M20Rik|ENSMUSG00000040591.12|RIKEN cDNA 1110051M20 gene
mm10_v2_chr19_-_10001625_10001633	0.244669	Rfx3_Rfx1_Rfx4	ENSMUST00000117346.1|Best1|ENSMUSG00000037418.5|bestrophin 1
mm10_v2_chr14_+_11227511_11227552	0.244153	Rfx3_Rfx1_Rfx4	ENSMUST00000080237.3|Rpl21-ps4|ENSMUSG00000072714.1|ribosomal protein L21, pseudogene 4
mm10_v2_chr18_+_56707725_56707940	0.242022	Rfx3_Rfx1_Rfx4	ENSMUST00000025486.8|Lmnb1|ENSMUSG00000024590.8|lamin B1
mm10_v2_chr19_-_10555724_10555761	0.240971	Rfx3_Rfx1_Rfx4	ENSMUST00000145210.1|Tmem216|ENSMUSG00000024667.5|transmembrane protein 216 	ENSMUST00000123788.1|Tmem216|ENSMUSG00000024667.5|transmembrane protein 216 	ENSMUST00000059582.2|Tmem216|ENSMUSG00000024667.5|transmembrane protein 216 	ENSMUST00000154383.1|Tmem216|ENSMUSG00000024667.5|transmembrane protein 216
mm10_v2_chr7_-_44748049_44748049	0.237632	Rfx3_Rfx1_Rfx4	ENSMUST00000120074.1|Zfp473|ENSMUSG00000048012.12|zinc finger protein 473
mm10_v2_chr2_-_5895319_5895432	0.236164	Rfx3_Rfx1_Rfx4	ENSMUST00000026926.4|Sec61a2|ENSMUSG00000025816.9|Sec61, alpha subunit 2 (S. cerevisiae) 	ENSMUST00000102981.3|Sec61a2|ENSMUSG00000025816.9|Sec61, alpha subunit 2 (S. cerevisiae)
mm10_v2_chr10_+_80299084_80299126	0.236144	Rfx3_Rfx1_Rfx4	ENSMUST00000154212.1|Apc2|ENSMUSG00000020135.7|adenomatosis polyposis coli 2
mm10_v2_chr16_-_96192222_96192262	0.236006	Rfx3_Rfx1_Rfx4	ENSMUST00000113804.1|Lca5l|ENSMUSG00000045275.9|Leber congenital amaurosis 5-like 	ENSMUST00000054855.7|Lca5l|ENSMUSG00000045275.9|Leber congenital amaurosis 5-like
mm10_v2_chrX_-_133898399_133898429	0.235436	Rfx3_Rfx1_Rfx4	ENSMUST00000087557.5|Tspan6|ENSMUSG00000067377.6|tetraspanin 6
mm10_v2_chr7_-_45694369_45694406	0.233734	Rfx3_Rfx1_Rfx4	ENSMUST00000040636.6|Sec1|ENSMUSG00000040364.6|secretory blood group 1
mm10_v2_chr16_-_32099697_32099752	0.233136	Rfx3_Rfx1_Rfx4	ENSMUST00000155966.1|Pigx|ENSMUSG00000023791.8|phosphatidylinositol glycan anchor biosynthesis, class X 	ENSMUST00000096109.4|Pigx|ENSMUSG00000023791.8|phosphatidylinositol glycan anchor biosynthesis, class X
mm10_v2_chr12_+_84362029_84362064	0.232382	Rfx3_Rfx1_Rfx4	ENSMUST00000110278.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast) 	ENSMUST00000145522.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr2_+_152962485_152962510	0.232058	Rfx3_Rfx1_Rfx4	ENSMUST00000099197.2|Ttll9|ENSMUSG00000074673.9|tubulin tyrosine ligase-like family, member 9 	ENSMUST00000103155.3|Ttll9|ENSMUSG00000074673.9|tubulin tyrosine ligase-like family, member 9
mm10_v2_chr3_-_57847478_57847610	0.229901	Rfx3_Rfx1_Rfx4	ENSMUST00000120289.1|Pfn2|ENSMUSG00000027805.10|profilin 2 	ENSMUST00000066882.8|Pfn2|ENSMUSG00000027805.10|profilin 2
mm10_v2_chr8_+_22808275_22808275	0.228929	Rfx3_Rfx1_Rfx4	ENSMUST00000068068.4|1700041G16Rik|ENSMUSG00000054822.4|RIKEN cDNA 1700041G16 gene
mm10_v2_chr5_+_136908130_136908174	0.228238	Rfx3_Rfx1_Rfx4	ENSMUST00000008131.8|Rabl5|ENSMUSG00000007987.8|RAB, member of RAS oncogene family-like 5
mm10_v2_chr2_+_29890096_29890156	0.225084	Rfx3_Rfx1_Rfx4	ENSMUST00000113762.1|Odf2|ENSMUSG00000026790.13|outer dense fiber of sperm tails 2 	ENSMUST00000113765.1|Odf2|ENSMUSG00000026790.13|outer dense fiber of sperm tails 2
mm10_v2_chr9_-_72491939_72492212	0.225029	Rfx3_Rfx1_Rfx4	ENSMUST00000185151.1|Tex9|ENSMUSG00000090626.3|testis expressed gene 9 	ENSMUST00000085358.5|Tex9|ENSMUSG00000090626.3|testis expressed gene 9 	ENSMUST00000184125.1|Tex9|ENSMUSG00000090626.3|testis expressed gene 9 	ENSMUST00000183574.1|Tex9|ENSMUSG00000090626.3|testis expressed gene 9 	ENSMUST00000184831.1|Tex9|ENSMUSG00000090626.3|testis expressed gene 9
mm10_v2_chr6_+_38381469_38381528	0.224476	Rfx3_Rfx1_Rfx4	ENSMUST00000162554.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26 	ENSMUST00000161751.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26
mm10_v2_chr10_+_127063599_127063655	0.223301	Rfx3_Rfx1_Rfx4	ENSMUST00000120226.1|Cdk4|ENSMUSG00000006728.6|cyclin-dependent kinase 4 	ENSMUST00000133115.1|Cdk4|ENSMUSG00000006728.6|cyclin-dependent kinase 4
mm10_v2_chr1_+_165461037_165461037	0.221245	Rfx3_Rfx1_Rfx4	ENSMUST00000027853.5|Mpc2|ENSMUSG00000026568.5|mitochondrial pyruvate carrier 2
mm10_v2_chr13_+_43615710_43615788	0.22118	Rfx3_Rfx1_Rfx4	ENSMUST00000059986.2|Rnf182|ENSMUSG00000044164.2|ring finger protein 182
mm10_v2_chr6_-_145434079_145434090	0.220546	Rfx3_Rfx1_Rfx4	ENSMUST00000149666.1|Ifltd1|ENSMUSG00000054966.7|intermediate filament tail domain containing 1
mm10_v2_chr5_-_137531204_137531297	0.218319	Rfx3_Rfx1_Rfx4	ENSMUST00000150063.2|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr9_-_121839460_121839465	0.218176	Rfx3_Rfx1_Rfx4	ENSMUST00000135986.2|Ccdc13|ENSMUSG00000079235.4|coiled-coil domain containing 13
mm10_v2_chr2_+_164746028_164746039	0.218172	Rfx3_Rfx1_Rfx4	ENSMUST00000109327.3|Dnttip1|ENSMUSG00000017299.7|deoxynucleotidyltransferase, terminal, interacting protein 1
mm10_v2_chr10_+_74967164_74967203	0.217198	Rfx3_Rfx1_Rfx4	ENSMUST00000037813.4|Gnaz|ENSMUSG00000040009.5|guanine nucleotide binding protein, alpha z subunit
mm10_v2_chr11_+_72689997_72690015	0.216577	Rfx3_Rfx1_Rfx4	ENSMUST00000155998.1|Ankfy1|ENSMUSG00000020790.8|ankyrin repeat and FYVE domain containing 1
mm10_v2_chr2_-_118549668_118549687	0.215426	Rfx3_Rfx1_Rfx4	ENSMUST00000090219.6|Bmf|ENSMUSG00000040093.9|BCL2 modifying factor
mm10_v2_chr2_+_31152316_31152360	0.214819	Rfx3_Rfx1_Rfx4	ENSMUST00000056433.6|Gpr107|ENSMUSG00000000194.7|G protein-coupled receptor 107
mm10_v2_chr16_-_3907651_3907707	0.214489	Rfx3_Rfx1_Rfx4	ENSMUST00000177221.1|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene 	ENSMUST00000177323.1|1700037C18Rik|ENSMUSG00000005983.9|RIKEN cDNA 1700037C18 gene
mm10_v2_chr5_+_123749696_123749735	0.213998	Rfx3_Rfx1_Rfx4	ENSMUST00000031366.7|Kntc1|ENSMUSG00000029414.7|kinetochore associated 1
mm10_v2_chr17_+_56584973_56585059	0.213612	Rfx3_Rfx1_Rfx4	ENSMUST00000182533.1|Safb|ENSMUSG00000071054.6|scaffold attachment factor B 	ENSMUST00000182800.1|Safb|ENSMUSG00000071054.6|scaffold attachment factor B 	ENSMUST00000095224.4|Safb|ENSMUSG00000071054.6|scaffold attachment factor B
mm10_v2_chr2_-_121271403_121271410	0.21227	Rfx3_Rfx1_Rfx4	ENSMUST00000110648.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr4_-_47010781_47010807	0.211697	Rfx3_Rfx1_Rfx4	ENSMUST00000135777.1|Gm568|ENSMUSG00000048824.7|predicted gene 568
mm10_v2_chr11_+_4160348_4160404	0.209408	Rfx3_Rfx1_Rfx4	ENSMUST00000002198.3|Sf3a1|ENSMUSG00000002129.5|splicing factor 3a, subunit 1
mm10_v2_chr2_-_118256929_118256973	0.209132	Rfx3_Rfx1_Rfx4	ENSMUST00000028820.6|Fsip1|ENSMUSG00000027344.7|fibrous sheath-interacting protein 1 	ENSMUST00000028821.3|Fsip1|ENSMUSG00000027344.7|fibrous sheath-interacting protein 1
mm10_v2_chr3_+_95134088_95134088	0.20885	Rfx3_Rfx1_Rfx4	ENSMUST00000066386.5|Lysmd1|ENSMUSG00000053769.5|LysM, putative peptidoglycan-binding, domain containing 1
mm10_v2_chr14_-_8666236_8666279	0.207865	Rfx3_Rfx1_Rfx4	ENSMUST00000102996.3|4930452B06Rik|ENSMUSG00000021747.11|RIKEN cDNA 4930452B06 gene
mm10_v2_chr4_+_130107556_130107606	0.206573	Rfx3_Rfx1_Rfx4	ENSMUST00000030563.5|Pef1|ENSMUSG00000028779.10|penta-EF hand domain containing 1
mm10_v2_chr11_-_59839745_59839763	0.206024	Rfx3_Rfx1_Rfx4	ENSMUST00000141415.1|Cops3|ENSMUSG00000019373.5|COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)
mm10_v2_chr3_+_57425314_57425452	0.20491	Rfx3_Rfx1_Rfx4	ENSMUST00000029377.7|Tm4sf4|ENSMUSG00000027801.7|transmembrane 4 superfamily member 4
mm10_v2_chr10_+_75037066_75037100	0.202825	Rfx3_Rfx1_Rfx4	ENSMUST00000147802.1|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family 	ENSMUST00000020391.5|Rab36|ENSMUSG00000020175.7|RAB36, member RAS oncogene family
mm10_v2_chr6_-_115853346_115853389	0.202624	Rfx3_Rfx1_Rfx4	ENSMUST00000032469.6|Mbd4|ENSMUSG00000030322.6|methyl-CpG binding domain protein 4
mm10_v2_chr13_+_112987802_112987838	0.201837	Rfx3_Rfx1_Rfx4	ENSMUST00000038404.4|Ccno|ENSMUSG00000042417.4|cyclin O
mm10_v2_chr13_-_34002784_34002812	0.201489	Rfx3_Rfx1_Rfx4	ENSMUST00000166354.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a 	ENSMUST00000076532.7|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a 	ENSMUST00000171034.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a
mm10_v2_chr5_-_136986829_136986901	0.198451	Rfx3_Rfx1_Rfx4	ENSMUST00000034953.7|Znhit1|ENSMUSG00000059518.8|zinc finger, HIT domain containing 1 	ENSMUST00000085941.5|Znhit1|ENSMUSG00000059518.8|zinc finger, HIT domain containing 1
mm10_v2_chr17_-_46144156_46144218	0.198451	Rfx3_Rfx1_Rfx4	ENSMUST00000024762.2|Rsph9|ENSMUSG00000023966.2|radial spoke head 9 homolog (Chlamydomonas)
mm10_v2_chr11_-_116335384_116335399	0.198065	Rfx3_Rfx1_Rfx4	ENSMUST00000036215.7|Foxj1|ENSMUSG00000034227.7|forkhead box J1
mm10_v2_chr10_-_128547722_128547774	0.197479	Rfx3_Rfx1_Rfx4	ENSMUST00000040572.3|Zc3h10|ENSMUSG00000039810.5|zinc finger CCCH type containing 10
mm10_v2_chr11_-_45955465_45955494	0.196261	Rfx3_Rfx1_Rfx4	ENSMUST00000011398.6|Thg1l|ENSMUSG00000011254.10|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm10_v2_chr19_+_5041337_5041416	0.196118	Rfx3_Rfx1_Rfx4	ENSMUST00000116567.2|Brms1|ENSMUSG00000080268.3|breast cancer metastasis-suppressor 1
mm10_v2_chr13_-_34002740_34002783	0.195693	Rfx3_Rfx1_Rfx4	ENSMUST00000167237.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a 	ENSMUST00000168400.1|Serpinb6a|ENSMUSG00000060147.9|serine (or cysteine) peptidase inhibitor, clade B, member 6a
mm10_v2_chr2_-_28699636_28699659	0.195461	Rfx3_Rfx1_Rfx4	ENSMUST00000102877.1|1700026L06Rik|ENSMUSG00000026809.9|RIKEN cDNA 1700026L06 gene
mm10_v2_chrX_+_152781986_152782029	0.19446	Rfx3_Rfx1_Rfx4	ENSMUST00000026383.3|Gpr143|ENSMUSG00000025333.4|G protein-coupled receptor 143
mm10_v2_chr11_-_121039400_121039463	0.193943	Rfx3_Rfx1_Rfx4	ENSMUST00000026159.5|Cd7|ENSMUSG00000025163.6|CD7 antigen
mm10_v2_chr10_+_79821006_79821029	0.192058	Rfx3_Rfx1_Rfx4	ENSMUST00000169041.1|Misp|ENSMUSG00000035852.4|mitotic spindle positioning
mm10_v2_chr2_-_121271341_121271397	0.191582	Rfx3_Rfx1_Rfx4	ENSMUST00000110647.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr3_-_32491969_32491969	0.189812	Rfx3_Rfx1_Rfx4	ENSMUST00000164954.1|Kcnmb3|ENSMUSG00000091091.1|potassium large conductance calcium-activated channel, subfamily M, beta member 3
mm10_v2_chr12_+_69963452_69963474	0.188693	Rfx3_Rfx1_Rfx4	ENSMUST00000110560.1|Gm3086|ENSMUSG00000079076.1|predicted gene 3086
mm10_v2_chr4_+_99829437_99829500	0.18667	Rfx3_Rfx1_Rfx4	ENSMUST00000124547.1|Efcab7|ENSMUSG00000073791.5|EF-hand calcium binding domain 7 	ENSMUST00000106994.1|Efcab7|ENSMUSG00000073791.5|EF-hand calcium binding domain 7
mm10_v2_chr2_+_112239468_112239508	0.186457	Rfx3_Rfx1_Rfx4	ENSMUST00000028554.3|Lpcat4|ENSMUSG00000027134.4|lysophosphatidylcholine acyltransferase 4
mm10_v2_chr8_+_85299632_85299667	0.183263	Rfx3_Rfx1_Rfx4	ENSMUST00000034132.5|Orc6|ENSMUSG00000031697.5|origin recognition complex, subunit 6 	ENSMUST00000170141.1|Orc6|ENSMUSG00000031697.5|origin recognition complex, subunit 6
mm10_v2_chr2_-_36049365_36049406	0.182898	Rfx3_Rfx1_Rfx4	ENSMUST00000070112.5|Ndufa8|ENSMUSG00000026895.7|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8
mm10_v2_chr14_-_118923070_118923167	0.182163	Rfx3_Rfx1_Rfx4	ENSMUST00000047208.5|Dzip1|ENSMUSG00000042156.9|DAZ interacting protein 1
mm10_v2_chr9_+_95637601_95637632	0.18204	Rfx3_Rfx1_Rfx4	ENSMUST00000015498.8|Pcolce2|ENSMUSG00000015354.8|procollagen C-endopeptidase enhancer 2
mm10_v2_chr8_+_71592158_71592291	0.181512	Rfx3_Rfx1_Rfx4	ENSMUST00000034264.4|Pgls|ENSMUSG00000031807.4|6-phosphogluconolactonase 	ENSMUST00000138742.1|Pgls|ENSMUSG00000031807.4|6-phosphogluconolactonase 	ENSMUST00000143441.1|Pgls|ENSMUSG00000031807.4|6-phosphogluconolactonase
mm10_v2_chr17_-_33955658_33955717	0.180884	Rfx3_Rfx1_Rfx4	ENSMUST00000174609.2|Rps18|ENSMUSG00000008668.8|ribosomal protein S18 	ENSMUST00000008812.7|Rps18|ENSMUSG00000008668.8|ribosomal protein S18
mm10_v2_chr4_-_41723129_41723179	0.180677	Rfx3_Rfx1_Rfx4	ENSMUST00000171641.1|Dctn3|ENSMUSG00000028447.5|dynactin 3 	ENSMUST00000030158.4|Dctn3|ENSMUSG00000028447.5|dynactin 3
mm10_v2_chr11_+_53567361_53567526	0.179118	Rfx3_Rfx1_Rfx4	ENSMUST00000057330.8|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000120613.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000173744.1|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000118353.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A
mm10_v2_chr17_-_55915870_55915870	0.178795	Rfx3_Rfx1_Rfx4	ENSMUST00000074828.4|Rpl21-ps6|ENSMUSG00000059912.4|ribosomal protein L21, pseudogene 6
mm10_v2_chrX_-_133898292_133898377	0.17848	Rfx3_Rfx1_Rfx4	ENSMUST00000176718.1|Tspan6|ENSMUSG00000067377.6|tetraspanin 6 	ENSMUST00000176641.1|Tspan6|ENSMUSG00000067377.6|tetraspanin 6
mm10_v2_chr7_+_140881898_140881968	0.178016	Rfx3_Rfx1_Rfx4	ENSMUST00000026560.7|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm10_v2_chr16_+_33056453_33056495	0.177807	Rfx3_Rfx1_Rfx4	ENSMUST00000078804.5|Rpl35a|ENSMUSG00000060636.7|ribosomal protein L35A 	ENSMUST00000115079.1|Rpl35a|ENSMUSG00000060636.7|ribosomal protein L35A
mm10_v2_chr6_+_83185946_83186151	0.177785	Rfx3_Rfx1_Rfx4	ENSMUST00000113907.1|Dctn1|ENSMUSG00000031865.9|dynactin 1
mm10_v2_chr2_+_152427639_152427699	0.17658	Rfx3_Rfx1_Rfx4	ENSMUST00000128737.1|6820408C15Rik|ENSMUSG00000032680.5|RIKEN cDNA 6820408C15 gene
mm10_v2_chr4_-_41314877_41314889	0.176034	Rfx3_Rfx1_Rfx4	ENSMUST00000030145.8|Dcaf12|ENSMUSG00000028436.8|DDB1 and CUL4 associated factor 12
mm10_v2_chr15_-_98763195_98763220	0.174901	Rfx3_Rfx1_Rfx4	ENSMUST00000053183.9|Arf3|ENSMUSG00000051853.8|ADP-ribosylation factor 3
mm10_v2_chr11_+_70130329_70130424	0.174063	Rfx3_Rfx1_Rfx4	ENSMUST00000041550.5|Mgl2|ENSMUSG00000040950.7|macrophage galactose N-acetyl-galactosamine specific lectin 2 	ENSMUST00000165951.1|Mgl2|ENSMUSG00000040950.7|macrophage galactose N-acetyl-galactosamine specific lectin 2
mm10_v2_chr11_-_97766508_97766574	0.173568	Rfx3_Rfx1_Rfx4	ENSMUST00000107579.1|Cwc25|ENSMUSG00000018541.4|CWC25 spliceosome-associated protein homolog (S. cerevisiae) 	ENSMUST00000018685.2|Cwc25|ENSMUSG00000018541.4|CWC25 spliceosome-associated protein homolog (S. cerevisiae)
mm10_v2_chr16_+_94570010_94570052	0.172116	Rfx3_Rfx1_Rfx4	ENSMUST00000119878.1|Dyrk1a|ENSMUSG00000022897.8|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
mm10_v2_chr6_-_77979652_77979708	0.171734	Rfx3_Rfx1_Rfx4	ENSMUST00000161846.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2 	ENSMUST00000160894.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2
mm10_v2_chr7_-_68749170_68749241	0.170549	Rfx3_Rfx1_Rfx4	ENSMUST00000118110.1|Arrdc4|ENSMUSG00000042659.8|arrestin domain containing 4 	ENSMUST00000048068.7|Arrdc4|ENSMUSG00000042659.8|arrestin domain containing 4
mm10_v2_chr14_+_50955992_50956169	0.16982	Rfx3_Rfx1_Rfx4	ENSMUST00000095925.4|Pnp2|ENSMUSG00000068417.7|purine-nucleoside phosphorylase 2
mm10_v2_chr16_+_35770382_35770396	0.168336	Rfx3_Rfx1_Rfx4	ENSMUST00000023555.4|Hspbap1|ENSMUSG00000022849.4|Hspb associated protein 1
mm10_v2_chr17_-_56609689_56609771	0.168041	Rfx3_Rfx1_Rfx4	ENSMUST00000052832.5|2410015M20Rik|ENSMUSG00000049760.5|RIKEN cDNA 2410015M20 gene
mm10_v2_chr6_-_145434925_145434953	0.165854	Rfx3_Rfx1_Rfx4	ENSMUST00000111708.2|Ifltd1|ENSMUSG00000054966.7|intermediate filament tail domain containing 1
mm10_v2_chr17_-_35703971_35703994	0.165311	Rfx3_Rfx1_Rfx4	ENSMUST00000148065.1|Ddr1|ENSMUSG00000003534.11|discoidin domain receptor family, member 1
mm10_v2_chr4_+_86930691_86930713	0.164817	Rfx3_Rfx1_Rfx4	ENSMUST00000164590.1|Acer2|ENSMUSG00000091609.1|alkaline ceramidase 2
mm10_v2_chr9_+_53405280_53405323	0.164747	Rfx3_Rfx1_Rfx4	ENSMUST00000005262.1|4930550C14Rik|ENSMUSG00000005131.3|RIKEN cDNA 4930550C14 gene
mm10_v2_chr3_+_108085976_108085976	0.164403	Rfx3_Rfx1_Rfx4	ENSMUST00000070502.1|Gm12500|ENSMUSG00000056411.1|predicted gene 12500
mm10_v2_chr4_-_41464816_41464892	0.164075	Rfx3_Rfx1_Rfx4	ENSMUST00000108055.2|Kif24|ENSMUSG00000028438.10|kinesin family member 24 	ENSMUST00000154535.1|Kif24|ENSMUSG00000028438.10|kinesin family member 24 	ENSMUST00000030148.5|Kif24|ENSMUSG00000028438.10|kinesin family member 24
mm10_v2_chr5_-_148928619_148928659	0.16359	Rfx3_Rfx1_Rfx4	ENSMUST00000149169.1|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1 	ENSMUST00000047257.8|Katnal1|ENSMUSG00000041298.9|katanin p60 subunit A-like 1
mm10_v2_chr7_+_19076242_19076273	0.163379	Rfx3_Rfx1_Rfx4	ENSMUST00000032570.7|Dmwd|ENSMUSG00000030410.10|dystrophia myotonica-containing WD repeat motif 	ENSMUST00000108479.1|Dmwd|ENSMUSG00000030410.10|dystrophia myotonica-containing WD repeat motif
mm10_v2_chr15_-_66500857_66500910	0.161995	Rfx3_Rfx1_Rfx4	ENSMUST00000023006.6|Lrrc6|ENSMUSG00000022375.6|leucine rich repeat containing 6 (testis)
mm10_v2_chr4_+_152478142_152478183	0.160719	Rfx3_Rfx1_Rfx4	ENSMUST00000081393.3|Nphp4|ENSMUSG00000039577.11|nephronophthisis 4 (juvenile) homolog (human)
mm10_v2_chr2_+_91922178_91922194	0.160495	Rfx3_Rfx1_Rfx4	ENSMUST00000170432.1|Chrm4|ENSMUSG00000040495.3|cholinergic receptor, muscarinic 4
mm10_v2_chr16_+_33056499_33056527	0.159379	Rfx3_Rfx1_Rfx4	ENSMUST00000115078.1|Rpl35a|ENSMUSG00000060636.7|ribosomal protein L35A
mm10_v2_chr11_+_101330605_101330605	0.159253	Rfx3_Rfx1_Rfx4	ENSMUST00000103105.3|Aoc3|ENSMUSG00000019326.8|amine oxidase, copper containing 3
mm10_v2_chr16_+_36041184_36041197	0.157859	Rfx3_Rfx1_Rfx4	ENSMUST00000042203.8|Wdr5b|ENSMUSG00000034379.8|WD repeat domain 5B
mm10_v2_chr3_-_95133989_95134017	0.157658	Rfx3_Rfx1_Rfx4	ENSMUST00000172572.2|Scnm1|ENSMUSG00000092607.3|sodium channel modifier 1 	ENSMUST00000173462.2|Scnm1|ENSMUSG00000092607.3|sodium channel modifier 1
mm10_v2_chr15_+_9436028_9436083	0.156579	Rfx3_Rfx1_Rfx4	ENSMUST00000042360.3|Capsl|ENSMUSG00000039676.3|calcyphosine-like
mm10_v2_chr14_+_31001383_31001407	0.155912	Rfx3_Rfx1_Rfx4	ENSMUST00000168584.1|Glt8d1|ENSMUSG00000021916.9|glycosyltransferase 8 domain containing 1
mm10_v2_chrX_+_166170449_166170512	0.154267	Rfx3_Rfx1_Rfx4	ENSMUST00000130880.2|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000056410.4|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000096252.3|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8 	ENSMUST00000087169.4|Gemin8|ENSMUSG00000040621.8|gem (nuclear organelle) associated protein 8
mm10_v2_chr1_+_74362108_74362156	0.153994	Rfx3_Rfx1_Rfx4	ENSMUST00000097697.1|Gm216|ENSMUSG00000073650.2|predicted gene 216
mm10_v2_chr16_-_91069142_91069159	0.153913	Rfx3_Rfx1_Rfx4	ENSMUST00000035689.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene 	ENSMUST00000114076.1|4932438H23Rik|ENSMUSG00000039851.5|RIKEN cDNA 4932438H23 gene
mm10_v2_chr4_-_153482768_153482811	0.153709	Rfx3_Rfx1_Rfx4	ENSMUST00000105646.2|Ajap1|ENSMUSG00000039546.9|adherens junction associated protein 1
mm10_v2_chr2_+_29890063_29890081	0.153333	Rfx3_Rfx1_Rfx4	ENSMUST00000028128.6|Odf2|ENSMUSG00000026790.13|outer dense fiber of sperm tails 2
mm10_v2_chr1_+_156366037_156366044	0.152567	Rfx3_Rfx1_Rfx4	ENSMUST00000102782.3|Gm2000|ENSMUSG00000078193.2|predicted gene 2000
mm10_v2_chr11_+_53519725_53519800	0.151461	Rfx3_Rfx1_Rfx4	ENSMUST00000108987.1|Sept8|ENSMUSG00000018398.12|septin 8 	ENSMUST00000121334.1|Sept8|ENSMUSG00000018398.12|septin 8 	ENSMUST00000117061.1|Sept8|ENSMUSG00000018398.12|septin 8
mm10_v2_chr4_+_32983008_32983155	0.149562	Rfx3_Rfx1_Rfx4	ENSMUST00000098190.3|Rragd|ENSMUSG00000028278.8|Ras-related GTP binding D 	ENSMUST00000029946.7|Rragd|ENSMUSG00000028278.8|Ras-related GTP binding D
mm10_v2_chr4_-_56802265_56802331	0.149477	Rfx3_Rfx1_Rfx4	ENSMUST00000030140.2|Ikbkap|ENSMUSG00000028431.5|inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein
mm10_v2_chr13_-_97137877_97137926	0.148809	Rfx3_Rfx1_Rfx4	ENSMUST00000073456.7|Nsa2|ENSMUSG00000060739.7|NSA2 ribosome biogenesis homolog (S. cerevisiae)
mm10_v2_chr11_+_3895223_3895310	0.147743	Rfx3_Rfx1_Rfx4	ENSMUST00000055931.4|Dusp18|ENSMUSG00000047205.6|dual specificity phosphatase 18 	ENSMUST00000109996.1|Dusp18|ENSMUSG00000047205.6|dual specificity phosphatase 18
mm10_v2_chr17_-_35979237_35979526	0.147407	Rfx3_Rfx1_Rfx4	ENSMUST00000165613.2|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3 	ENSMUST00000173872.1|Prr3|ENSMUSG00000038500.9|proline-rich polypeptide 3
mm10_v2_chr7_-_126976092_126976105	0.147199	Rfx3_Rfx1_Rfx4	ENSMUST00000181859.1|D830044I16Rik|ENSMUSG00000097075.1|RIKEN cDNA D830044I16 gene
mm10_v2_chr13_-_49320219_49320311	0.144204	Rfx3_Rfx1_Rfx4	ENSMUST00000110086.1|Fgd3|ENSMUSG00000037946.5|FYVE, RhoGEF and PH domain containing 3
mm10_v2_chr19_-_4906598_4906632	0.14399	Rfx3_Rfx1_Rfx4	ENSMUST00000053506.6|Bbs1|ENSMUSG00000006464.8|Bardet-Biedl syndrome 1 (human)
mm10_v2_chr4_-_117125618_117125683	0.143987	Rfx3_Rfx1_Rfx4	ENSMUST00000183310.1|Btbd19|ENSMUSG00000073771.5|BTB (POZ) domain containing 19
mm10_v2_chr7_-_25250720_25250761	0.143781	Rfx3_Rfx1_Rfx4	ENSMUST00000116343.2|Erf|ENSMUSG00000040857.9|Ets2 repressor factor 	ENSMUST00000045847.8|Erf|ENSMUSG00000040857.9|Ets2 repressor factor
mm10_v2_chr5_-_103211251_103211334	0.14243	Rfx3_Rfx1_Rfx4	ENSMUST00000060871.5|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112846.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000170792.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10 	ENSMUST00000112847.2|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr10_+_13008442_13008519	0.141848	Rfx3_Rfx1_Rfx4	ENSMUST00000105139.3|Sf3b5|ENSMUSG00000078348.3|splicing factor 3b, subunit 5
mm10_v2_chr1_-_171287931_171287991	0.140166	Rfx3_Rfx1_Rfx4	ENSMUST00000111306.3|Usp21|ENSMUSG00000053483.7|ubiquitin specific peptidase 21 	ENSMUST00000065941.5|Usp21|ENSMUSG00000053483.7|ubiquitin specific peptidase 21
mm10_v2_chr17_+_35241838_35241870	0.139786	Rfx3_Rfx1_Rfx4	ENSMUST00000173731.1|Ddx39b|ENSMUSG00000019432.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm10_v2_chr17_+_80290206_80290279	0.139266	Rfx3_Rfx1_Rfx4	ENSMUST00000061703.9|Morn2|ENSMUSG00000045257.9|MORN repeat containing 2
mm10_v2_chr17_+_49615104_49615172	0.138821	Rfx3_Rfx1_Rfx4	ENSMUST00000162854.1|Kif6|ENSMUSG00000023999.8|kinesin family member 6
mm10_v2_chr2_-_3332566_3332650	0.138652	Rfx3_Rfx1_Rfx4	ENSMUST00000062672.6|Rpp38|ENSMUSG00000049950.6|ribonuclease P/MRP 38 subunit
mm10_v2_chr4_+_152338619_152338709	0.138434	Rfx3_Rfx1_Rfx4	ENSMUST00000030775.5|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5 	ENSMUST00000164662.1|Chd5|ENSMUSG00000005045.10|chromodomain helicase DNA binding protein 5
mm10_v2_chr4_+_138972885_138972920	0.137508	Rfx3_Rfx1_Rfx4	ENSMUST00000123636.1|Tmco4|ENSMUSG00000041143.10|transmembrane and coiled-coil domains 4 	ENSMUST00000043042.3|Tmco4|ENSMUSG00000041143.10|transmembrane and coiled-coil domains 4 	ENSMUST00000050949.2|Tmco4|ENSMUSG00000041143.10|transmembrane and coiled-coil domains 4
mm10_v2_chr3_-_89214329_89214372	0.137242	Rfx3_Rfx1_Rfx4	ENSMUST00000118964.2|Mtx1|ENSMUSG00000064068.7|metaxin 1
mm10_v2_chr12_+_5411641_5411641	0.136808	Rfx3_Rfx1_Rfx4	ENSMUST00000163627.1|2810032G03Rik|ENSMUSG00000037735.6|RIKEN cDNA 2810032G03 gene
mm10_v2_chr13_-_97747399_97747414	0.136375	Rfx3_Rfx1_Rfx4	ENSMUST00000144993.1|5330416C01Rik|ENSMUSG00000054944.7|RIKEN cDNA 5330416C01 gene
mm10_v2_chr7_-_140881811_140881869	0.135075	Rfx3_Rfx1_Rfx4	ENSMUST00000106048.3|Sirt3|ENSMUSG00000025486.10|sirtuin 3 	ENSMUST00000147331.2|Sirt3|ENSMUSG00000025486.10|sirtuin 3 	ENSMUST00000137710.1|Sirt3|ENSMUSG00000025486.10|sirtuin 3
mm10_v2_chr7_-_125491397_125491413	0.134518	Rfx3_Rfx1_Rfx4	ENSMUST00000138616.1|Nsmce1|ENSMUSG00000030750.7|non-SMC element 1 homolog (S. cerevisiae)
mm10_v2_chr5_+_135632618_135632647	0.134215	Rfx3_Rfx1_Rfx4	ENSMUST00000043707.6|Rhbdd2|ENSMUSG00000039917.6|rhomboid domain containing 2
mm10_v2_chr10_-_82690608_82690650	0.133629	Rfx3_Rfx1_Rfx4	ENSMUST00000065815.6|Glt8d2|ENSMUSG00000020251.7|glycosyltransferase 8 domain containing 2 	ENSMUST00000020485.3|Glt8d2|ENSMUSG00000020251.7|glycosyltransferase 8 domain containing 2
mm10_v2_chr8_-_94918012_94918098	0.133489	Rfx3_Rfx1_Rfx4	ENSMUST00000077955.5|Ccdc102a|ENSMUSG00000063605.5|coiled-coil domain containing 102A
mm10_v2_chr9_+_82829806_82829834	0.132897	Rfx3_Rfx1_Rfx4	ENSMUST00000113245.2|Irak1bp1|ENSMUSG00000032251.6|interleukin-1 receptor-associated kinase 1 binding protein 1 	ENSMUST00000034783.4|Irak1bp1|ENSMUSG00000032251.6|interleukin-1 receptor-associated kinase 1 binding protein 1
mm10_v2_chr7_+_44748413_44748560	0.132851	Rfx3_Rfx1_Rfx4	ENSMUST00000002275.8|Vrk3|ENSMUSG00000002205.9|vaccinia related kinase 3
mm10_v2_chr3_+_98382438_98382520	0.132811	Rfx3_Rfx1_Rfx4	ENSMUST00000056096.8|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chr2_+_85050439_85050500	0.132087	Rfx3_Rfx1_Rfx4	ENSMUST00000111605.2|Tnks1bp1|ENSMUSG00000033955.6|tankyrase 1 binding protein 1
mm10_v2_chr7_-_44929410_44929521	0.131697	Rfx3_Rfx1_Rfx4	ENSMUST00000107857.3|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit 	ENSMUST00000085399.6|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit 	ENSMUST00000167930.1|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit 	ENSMUST00000166972.1|Ap2a1|ENSMUSG00000060279.7|adaptor-related protein complex 2, alpha 1 subunit
mm10_v2_chr15_-_75841907_75841932	0.129616	Rfx3_Rfx1_Rfx4	ENSMUST00000100538.2|Zc3h3|ENSMUSG00000075600.2|zinc finger CCCH type containing 3
mm10_v2_chr1_-_171287916_171287929	0.129584	Rfx3_Rfx1_Rfx4	ENSMUST00000111305.1|Usp21|ENSMUSG00000053483.7|ubiquitin specific peptidase 21
mm10_v2_chr5_-_124478330_124478384	0.129374	Rfx3_Rfx1_Rfx4	ENSMUST00000031347.7|Rilpl2|ENSMUSG00000029401.7|Rab interacting lysosomal protein-like 2
mm10_v2_chr7_-_125491586_125491596	0.129222	Rfx3_Rfx1_Rfx4	ENSMUST00000033006.7|Nsmce1|ENSMUSG00000030750.7|non-SMC element 1 homolog (S. cerevisiae)
mm10_v2_chr1_+_90603425_90603511	0.128843	Rfx3_Rfx1_Rfx4	ENSMUST00000036153.5|Cops8|ENSMUSG00000034432.5|COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)
mm10_v2_chr5_-_124187150_124187225	0.127911	Rfx3_Rfx1_Rfx4	ENSMUST00000161938.1|Pitpnm2|ENSMUSG00000029406.9|phosphatidylinositol transfer protein, membrane-associated 2
mm10_v2_chr9_+_44066993_44067024	0.127897	Rfx3_Rfx1_Rfx4	ENSMUST00000034508.7|Usp2|ENSMUSG00000032010.8|ubiquitin specific peptidase 2
mm10_v2_chr19_+_6942501_6942584	0.127241	Rfx3_Rfx1_Rfx4	ENSMUST00000113423.3|Bad|ENSMUSG00000024959.7|BCL2-associated agonist of cell death
mm10_v2_chr2_+_129129700_129129791	0.127235	Rfx3_Rfx1_Rfx4	ENSMUST00000035481.4|Chchd5|ENSMUSG00000037938.4|coiled-coil-helix-coiled-coil-helix domain containing 5
mm10_v2_chr15_+_79659196_79659267	0.127002	Rfx3_Rfx1_Rfx4	ENSMUST00000023064.7|Cby1|ENSMUSG00000022428.7|chibby homolog 1 (Drosophila)
mm10_v2_chr17_-_6961156_6961156	0.124427	Rfx3_Rfx1_Rfx4	ENSMUST00000063683.6|Tagap1|ENSMUSG00000052031.7|T cell activation GTPase activating protein 1
mm10_v2_chr19_+_4839366_4839482	0.122489	Rfx3_Rfx1_Rfx4	ENSMUST00000088653.2|Ccdc87|ENSMUSG00000067872.2|coiled-coil domain containing 87
mm10_v2_chr10_+_39899304_39899352	0.122488	Rfx3_Rfx1_Rfx4	ENSMUST00000181590.1|4930547M16Rik|ENSMUSG00000097890.1|RIKEN cDNA 4930547M16 gene
mm10_v2_chr7_+_27473761_27473773	0.122304	Rfx3_Rfx1_Rfx4	ENSMUST00000068641.6|Sertad3|ENSMUSG00000055200.6|SERTA domain containing 3
mm10_v2_chr3_-_89213840_89213923	0.122101	Rfx3_Rfx1_Rfx4	ENSMUST00000173477.1|Mtx1|ENSMUSG00000064068.7|metaxin 1 	ENSMUST00000119222.1|Mtx1|ENSMUSG00000064068.7|metaxin 1
mm10_v2_chr4_-_95052188_95052222	0.121713	Rfx3_Rfx1_Rfx4	ENSMUST00000107094.1|Jun|ENSMUSG00000052684.3|Jun oncogene
mm10_v2_chr16_-_43979050_43979093	0.120336	Rfx3_Rfx1_Rfx4	ENSMUST00000165648.1|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23 	ENSMUST00000036321.7|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23
mm10_v2_chr10_-_80900749_80900969	0.119359	Rfx3_Rfx1_Rfx4	ENSMUST00000020440.6|Timm13|ENSMUSG00000020219.6|translocase of inner mitochondrial membrane 13
mm10_v2_chr5_-_122264378_122264460	0.118874	Rfx3_Rfx1_Rfx4	ENSMUST00000111738.3|Tctn1|ENSMUSG00000038593.12|tectonic family member 1
mm10_v2_chr7_+_16959714_16959800	0.118314	Rfx3_Rfx1_Rfx4	ENSMUST00000038163.6|Pnmal1|ENSMUSG00000041141.6|PNMA-like 1
mm10_v2_chr9_+_46282997_46283024	0.117907	Rfx3_Rfx1_Rfx4	ENSMUST00000074957.3|Bud13|ENSMUSG00000032077.4|BUD13 homolog (yeast)
mm10_v2_chr1_+_83159733_83159781	0.117893	Rfx3_Rfx1_Rfx4	ENSMUST00000113436.1|Daw1|ENSMUSG00000053161.10|dynein assembly factor with WDR repeat domains 1 	ENSMUST00000065436.3|Daw1|ENSMUSG00000053161.10|dynein assembly factor with WDR repeat domains 1 	ENSMUST00000065403.6|Daw1|ENSMUSG00000053161.10|dynein assembly factor with WDR repeat domains 1
mm10_v2_chr16_-_91728599_91728637	0.117253	Rfx3_Rfx1_Rfx4	ENSMUST00000122254.1|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr8_+_83666827_83666882	0.116537	Rfx3_Rfx1_Rfx4	ENSMUST00000019608.5|Ptger1|ENSMUSG00000019464.5|prostaglandin E receptor 1 (subtype EP1)
mm10_v2_chr12_-_110889119_110889145	0.116528	Rfx3_Rfx1_Rfx4	ENSMUST00000043716.8|Cinp|ENSMUSG00000021276.9|cyclin-dependent kinase 2 interacting protein
mm10_v2_chr4_-_141790891_141790931	0.116276	Rfx3_Rfx1_Rfx4	ENSMUST00000038014.4|Dnajc16|ENSMUSG00000040697.4|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENSMUST00000153880.1|Dnajc16|ENSMUSG00000040697.4|DnaJ (Hsp40) homolog, subfamily C, member 16
mm10_v2_chr12_+_69790288_69790288	0.116051	Rfx3_Rfx1_Rfx4	ENSMUST00000021378.3|4930512B01Rik|ENSMUSG00000020992.3|RIKEN cDNA 4930512B01 gene
mm10_v2_chr15_-_34443508_34443640	0.116007	Rfx3_Rfx1_Rfx4	ENSMUST00000079735.5|Rpl30|ENSMUSG00000058600.7|ribosomal protein L30
mm10_v2_chr8_-_22805596_22805654	0.11558	Rfx3_Rfx1_Rfx4	ENSMUST00000163739.1|Ap3m2|ENSMUSG00000031539.5|adaptor-related protein complex 3, mu 2 subunit
mm10_v2_chr2_+_118663235_118663309	0.115242	Rfx3_Rfx1_Rfx4	ENSMUST00000099557.3|Pak6|ENSMUSG00000074923.4|p21 protein (Cdc42/Rac)-activated kinase 6
mm10_v2_chr8_+_94772009_94772009	0.115155	Rfx3_Rfx1_Rfx4	ENSMUST00000034230.5|Cx3cl1|ENSMUSG00000031778.6|chemokine (C-X3-C motif) ligand 1
mm10_v2_chr6_-_87496279_87496332	0.114483	Rfx3_Rfx1_Rfx4	ENSMUST00000101197.2|Arhgap25|ENSMUSG00000030047.8|Rho GTPase activating protein 25
mm10_v2_chr11_-_120932832_120932876	0.114429	Rfx3_Rfx1_Rfx4	ENSMUST00000056781.4|Ccdc57|ENSMUSG00000048445.6|coiled-coil domain containing 57
mm10_v2_chr11_+_98863610_98863646	0.113042	Rfx3_Rfx1_Rfx4	ENSMUST00000142414.1|Wipf2|ENSMUSG00000038013.8|WAS/WASL interacting protein family, member 2 	ENSMUST00000037480.8|Wipf2|ENSMUSG00000038013.8|WAS/WASL interacting protein family, member 2
mm10_v2_chr8_+_94666722_94666769	0.112621	Rfx3_Rfx1_Rfx4	ENSMUST00000034228.8|Arl2bp|ENSMUSG00000031776.10|ADP-ribosylation factor-like 2 binding protein
mm10_v2_chr5_-_122372230_122372390	0.11214	Rfx3_Rfx1_Rfx4	ENSMUST00000031419.5|Fam216a|ENSMUSG00000029463.5|family with sequence similarity 216, member A
mm10_v2_chr4_-_126753372_126753440	0.1112	Rfx3_Rfx1_Rfx4	ENSMUST00000030637.7|Ncdn|ENSMUSG00000028833.7|neurochondrin 	ENSMUST00000106116.1|Ncdn|ENSMUSG00000028833.7|neurochondrin
mm10_v2_chr3_-_106001474_106001513	0.110872	Rfx3_Rfx1_Rfx4	ENSMUST00000066319.6|Pifo|ENSMUSG00000010136.8|primary cilia formation
mm10_v2_chr17_+_47785720_47785739	0.110285	Rfx3_Rfx1_Rfx4	ENSMUST00000024786.7|Tfeb|ENSMUSG00000023990.12|transcription factor EB
mm10_v2_chr11_-_61453992_61454106	0.110016	Rfx3_Rfx1_Rfx4	ENSMUST00000060255.7|Rnf112|ENSMUSG00000010086.11|ring finger protein 112 	ENSMUST00000054927.7|Rnf112|ENSMUSG00000010086.11|ring finger protein 112 	ENSMUST00000102661.3|Rnf112|ENSMUSG00000010086.11|ring finger protein 112
mm10_v2_chr9_-_14771004_14771044	0.108741	Rfx3_Rfx1_Rfx4	ENSMUST00000060330.3|1700012B09Rik|ENSMUSG00000031927.3|RIKEN cDNA 1700012B09 gene
mm10_v2_chr11_+_78245743_78245821	0.10852	Rfx3_Rfx1_Rfx4	ENSMUST00000002133.8|Sdf2|ENSMUSG00000002064.10|stromal cell derived factor 2
mm10_v2_chr11_-_76468396_76468473	0.10821	Rfx3_Rfx1_Rfx4	ENSMUST00000065028.7|Abr|ENSMUSG00000017631.12|active BCR-related gene
mm10_v2_chr13_+_46273700_46273721	0.108008	Rfx3_Rfx1_Rfx4	ENSMUST00000076622.3|Stmnd1|ENSMUSG00000063529.3|stathmin domain containing 1
mm10_v2_chr10_+_42860543_42860627	0.107564	Rfx3_Rfx1_Rfx4	ENSMUST00000157071.1|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr9_+_108569885_108569943	0.107381	Rfx3_Rfx1_Rfx4	ENSMUST00000019183.8|Dalrd3|ENSMUSG00000019039.8|DALR anticodon binding domain containing 3
mm10_v2_chr11_+_70562980_70563070	0.106787	Rfx3_Rfx1_Rfx4	ENSMUST00000079244.5|Mink1|ENSMUSG00000020827.12|misshapen-like kinase 1 (zebrafish) 	ENSMUST00000102558.4|Mink1|ENSMUSG00000020827.12|misshapen-like kinase 1 (zebrafish)
mm10_v2_chr11_-_34208085_34208092	0.104899	Rfx3_Rfx1_Rfx4	ENSMUST00000060271.2|Foxi1|ENSMUSG00000047861.2|forkhead box I1
mm10_v2_chr9_-_26806384_26806468	0.104887	Rfx3_Rfx1_Rfx4	ENSMUST00000162702.1|Glb1l2|ENSMUSG00000036395.8|galactosidase, beta 1-like 2 	ENSMUST00000040398.7|Glb1l2|ENSMUSG00000036395.8|galactosidase, beta 1-like 2 	ENSMUST00000066560.6|Glb1l2|ENSMUSG00000036395.8|galactosidase, beta 1-like 2
mm10_v2_chr11_-_5878207_5878292	0.102723	Rfx3_Rfx1_Rfx4	ENSMUST00000102922.3|Pold2|ENSMUSG00000020471.5|polymerase (DNA directed), delta 2, regulatory subunit
mm10_v2_chr7_-_126975400_126975510	0.102171	Rfx3_Rfx1_Rfx4	ENSMUST00000180704.1|D830044I16Rik|ENSMUSG00000097075.1|RIKEN cDNA D830044I16 gene
mm10_v2_chr8_+_110217948_110218004	0.10209	Rfx3_Rfx1_Rfx4	ENSMUST00000056972.4|Cmtr2|ENSMUSG00000046441.4|cap methyltransferase 2
mm10_v2_chr1_+_152766540_152766551	0.10208	Rfx3_Rfx1_Rfx4	ENSMUST00000077755.5|Arpc5|ENSMUSG00000008475.7|actin related protein 2/3 complex, subunit 5 	ENSMUST00000097536.4|Arpc5|ENSMUSG00000008475.7|actin related protein 2/3 complex, subunit 5
mm10_v2_chr8_+_122611618_122611663	0.101199	Rfx3_Rfx1_Rfx4	ENSMUST00000015157.8|Trappc2l|ENSMUSG00000015013.8|trafficking protein particle complex 2-like
mm10_v2_chr8_+_123212857_123212911	0.100682	Rfx3_Rfx1_Rfx4	ENSMUST00000060133.6|Spata33|ENSMUSG00000048478.6|spermatogenesis associated 33
mm10_v2_chr11_+_70562898_70562922	0.100654	Rfx3_Rfx1_Rfx4	ENSMUST00000102559.4|Mink1|ENSMUSG00000020827.12|misshapen-like kinase 1 (zebrafish)
mm10_v2_chr4_+_56802337_56802359	0.0996759	Rfx3_Rfx1_Rfx4	ENSMUST00000045368.5|BC026590|ENSMUSG00000038827.5|cDNA sequence BC026590
mm10_v2_chr11_+_48800357_48800369	0.0989048	Rfx3_Rfx1_Rfx4	ENSMUST00000020640.7|Gnb2l1|ENSMUSG00000020372.9|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1
mm10_v2_chr4_-_153975038_153975126	0.0986701	Rfx3_Rfx1_Rfx4	ENSMUST00000030893.2|Dffb|ENSMUSG00000029027.2|DNA fragmentation factor, beta subunit
mm10_v2_chr8_-_92356103_92356120	0.0980743	Rfx3_Rfx1_Rfx4	ENSMUST00000034183.3|4933436C20Rik|ENSMUSG00000031736.4|RIKEN cDNA 4933436C20 gene
mm10_v2_chr8_-_122611419_122611487	0.0980273	Rfx3_Rfx1_Rfx4	ENSMUST00000015171.9|Galns|ENSMUSG00000015027.10|galactosamine (N-acetyl)-6-sulfate sulfatase
mm10_v2_chr8_-_27202542_27202557	0.0978805	Rfx3_Rfx1_Rfx4	ENSMUST00000038174.6|Got1l1|ENSMUSG00000039720.6|glutamic-oxaloacetic transaminase 1-like 1
mm10_v2_chr2_-_169405435_169405473	0.0978432	Rfx3_Rfx1_Rfx4	ENSMUST00000131509.1|4930529I22Rik|ENSMUSG00000085350.1|RIKEN cDNA 4930529I22 gene
mm10_v2_chr5_+_147430407_147430545	0.0973252	Rfx3_Rfx1_Rfx4	ENSMUST00000176600.1|Pan3|ENSMUSG00000029647.9|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm10_v2_chr12_-_118198917_118199043	0.0969549	Rfx3_Rfx1_Rfx4	ENSMUST00000084806.6|Dnah11|ENSMUSG00000018581.9|dynein, axonemal, heavy chain 11
mm10_v2_chr15_-_34443209_34443227	0.096777	Rfx3_Rfx1_Rfx4	ENSMUST00000009039.5|Rpl30|ENSMUSG00000058600.7|ribosomal protein L30
mm10_v2_chr11_-_69878018_69878058	0.096065	Rfx3_Rfx1_Rfx4	ENSMUST00000178597.1|Tmem95|ENSMUSG00000094845.1|transmembrane protein 95
mm10_v2_chr17_+_78937124_78937183	0.0959871	Rfx3_Rfx1_Rfx4	ENSMUST00000024887.4|Ndufaf7|ENSMUSG00000024082.4|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 7
mm10_v2_chr11_+_87853207_87853249	0.0959743	Rfx3_Rfx1_Rfx4	ENSMUST00000038196.6|Mks1|ENSMUSG00000034121.6|Meckel syndrome, type 1
mm10_v2_chr3_+_105959369_105959427	0.0950612	Rfx3_Rfx1_Rfx4	ENSMUST00000010278.5|Wdr77|ENSMUSG00000000561.8|WD repeat domain 77
mm10_v2_chr17_-_24650270_24650311	0.0949866	Rfx3_Rfx1_Rfx4	ENSMUST00000002572.4|Slc9a3r2|ENSMUSG00000002504.8|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2
mm10_v2_chr15_+_78428564_78428636	0.0939373	Rfx3_Rfx1_Rfx4	ENSMUST00000166142.2|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17 	ENSMUST00000162517.1|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17 	ENSMUST00000089414.4|Kctd17|ENSMUSG00000033287.9|potassium channel tetramerisation domain containing 17
mm10_v2_chr16_-_91728975_91729092	0.0923545	Rfx3_Rfx1_Rfx4	ENSMUST00000073466.6|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr7_-_140882274_140882330	0.0923466	Rfx3_Rfx1_Rfx4	ENSMUST00000026559.7|Sirt3|ENSMUSG00000025486.10|sirtuin 3
mm10_v2_chr1_-_119997161_119997190	0.0918043	Rfx3_Rfx1_Rfx4	ENSMUST00000174370.1|Gm101|ENSMUSG00000036962.6|predicted gene 101
mm10_v2_chr4_+_155086577_155086610	0.0913586	Rfx3_Rfx1_Rfx4	ENSMUST00000030915.4|Morn1|ENSMUSG00000029049.8|MORN repeat containing 1 	ENSMUST00000155775.1|Morn1|ENSMUSG00000029049.8|MORN repeat containing 1 	ENSMUST00000127457.1|Morn1|ENSMUSG00000029049.8|MORN repeat containing 1
mm10_v2_chr7_+_140882430_140882472	0.0911768	Rfx3_Rfx1_Rfx4	ENSMUST00000164681.1|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 	ENSMUST00000163610.1|Psmd13|ENSMUSG00000025487.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
mm10_v2_chr12_+_85219475_85219546	0.0908858	Rfx3_Rfx1_Rfx4	ENSMUST00000004910.5|Eif2b2|ENSMUSG00000004788.5|eukaryotic translation initiation factor 2B, subunit 2 beta 	ENSMUST00000140900.1|Eif2b2|ENSMUSG00000004788.5|eukaryotic translation initiation factor 2B, subunit 2 beta 	ENSMUST00000136495.1|Eif2b2|ENSMUSG00000004788.5|eukaryotic translation initiation factor 2B, subunit 2 beta
mm10_v2_chr7_+_60155538_60155538	0.0908605	Rfx3_Rfx1_Rfx4	ENSMUST00000057611.4|Gm7367|ENSMUSG00000047370.4|predicted pseudogene 7367
mm10_v2_chr7_+_126847908_126847962	0.0902744	Rfx3_Rfx1_Rfx4	ENSMUST00000147257.1|Doc2a|ENSMUSG00000052301.8|double C2, alpha 	ENSMUST00000139174.1|Doc2a|ENSMUSG00000052301.8|double C2, alpha
mm10_v2_chr9_+_108002501_108002680	0.0902346	Rfx3_Rfx1_Rfx4	ENSMUST00000035214.4|Ip6k1|ENSMUSG00000032594.5|inositol hexaphosphate kinase 1 	ENSMUST00000175874.1|Ip6k1|ENSMUSG00000032594.5|inositol hexaphosphate kinase 1
mm10_v2_chr11_-_115322025_115322064	0.0899608	Rfx3_Rfx1_Rfx4	ENSMUST00000103037.4|Ush1g|ENSMUSG00000045288.10|Usher syndrome 1G
mm10_v2_chr4_-_55532453_55532485	0.0896606	Rfx3_Rfx1_Rfx4	ENSMUST00000132746.1|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut) 	ENSMUST00000107619.2|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut)
mm10_v2_chr1_+_86154752_86154821	0.0894927	Rfx3_Rfx1_Rfx4	ENSMUST00000113309.2|Armc9|ENSMUSG00000062590.7|armadillo repeat containing 9 	ENSMUST00000027434.8|Armc9|ENSMUSG00000062590.7|armadillo repeat containing 9 	ENSMUST00000131412.1|Armc9|ENSMUSG00000062590.7|armadillo repeat containing 9
mm10_v2_chr17_+_85090647_85090726	0.0891252	Rfx3_Rfx1_Rfx4	ENSMUST00000095188.5|Camkmt|ENSMUSG00000071037.5|calmodulin-lysine N-methyltransferase
mm10_v2_chr18_-_61176994_61177057	0.0891048	Rfx3_Rfx1_Rfx4	ENSMUST00000091884.4|Hmgxb3|ENSMUSG00000024622.7|HMG box domain containing 3
mm10_v2_chr7_-_4684963_4684997	0.0882556	Rfx3_Rfx1_Rfx4	ENSMUST00000079970.4|Hspbp1|ENSMUSG00000063802.4|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
mm10_v2_chr16_-_4964168_4964237	0.0881304	Rfx3_Rfx1_Rfx4	ENSMUST00000023157.4|Anks3|ENSMUSG00000022515.5|ankyrin repeat and sterile alpha motif domain containing 3
mm10_v2_chr10_-_81060134_81060204	0.0874309	Rfx3_Rfx1_Rfx4	ENSMUST00000005067.5|Sgta|ENSMUSG00000004937.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
mm10_v2_chr11_+_101425068_101425114	0.0871723	Rfx3_Rfx1_Rfx4	ENSMUST00000040561.5|Rundc1|ENSMUSG00000035007.5|RUN domain containing 1
mm10_v2_chr6_-_83125029_83125135	0.0870078	Rfx3_Rfx1_Rfx4	ENSMUST00000032109.4|Ino80b|ENSMUSG00000030034.5|INO80 complex subunit B
mm10_v2_chr1_+_179668202_179668268	0.0868913	Rfx3_Rfx1_Rfx4	ENSMUST00000040538.3|Sccpdh|ENSMUSG00000038936.7|saccharopine dehydrogenase (putative)
mm10_v2_chr4_-_43429117_43429139	0.0863483	Rfx3_Rfx1_Rfx4	ENSMUST00000171134.2|Fam166b|ENSMUSG00000042788.6|family with sequence similarity 166, member B 	ENSMUST00000052829.3|Fam166b|ENSMUSG00000042788.6|family with sequence similarity 166, member B
mm10_v2_chrX_+_151198078_151198140	0.0854411	Rfx3_Rfx1_Rfx4	ENSMUST00000184730.1|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3 	ENSMUST00000184392.1|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3 	ENSMUST00000096285.4|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3
mm10_v2_chr1_+_42697146_42697146	0.0852363	Rfx3_Rfx1_Rfx4	ENSMUST00000054883.2|Pou3f3|ENSMUSG00000045515.2|POU domain, class 3, transcription factor 3
mm10_v2_chr7_+_3303643_3303654	0.0851504	Rfx3_Rfx1_Rfx4	ENSMUST00000172109.1|Prkcg|ENSMUSG00000078816.3|protein kinase C, gamma
mm10_v2_chr1_-_163085643_163085674	0.0849926	Rfx3_Rfx1_Rfx4	ENSMUST00000096608.4|Mroh9|ENSMUSG00000071890.4|maestro heat-like repeat family member 9
mm10_v2_chr9_-_41004599_41004632	0.0839957	Rfx3_Rfx1_Rfx4	ENSMUST00000180384.1|Crtam|ENSMUSG00000032021.7|cytotoxic and regulatory T cell molecule
mm10_v2_chr9_+_44398176_44398176	0.0837455	Rfx3_Rfx1_Rfx4	ENSMUST00000165839.1|Slc37a4|ENSMUSG00000032114.8|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm10_v2_chr6_-_128424883_128424935	0.0837153	Rfx3_Rfx1_Rfx4	ENSMUST00000001559.8|Itfg2|ENSMUSG00000001518.10|integrin alpha FG-GAP repeat containing 2
mm10_v2_chr17_+_33955812_33955901	0.0830748	Rfx3_Rfx1_Rfx4	ENSMUST00000025178.9|Vps52|ENSMUSG00000024319.11|vacuolar protein sorting 52 (yeast) 	ENSMUST00000114330.2|Vps52|ENSMUSG00000024319.11|vacuolar protein sorting 52 (yeast)
mm10_v2_chr4_+_110397764_110397808	0.0826526	Rfx3_Rfx1_Rfx4	ENSMUST00000097920.2|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4 	ENSMUST00000080744.6|Agbl4|ENSMUSG00000061298.8|ATP/GTP binding protein-like 4
mm10_v2_chr4_+_53631506_53631574	0.0824731	Rfx3_Rfx1_Rfx4	ENSMUST00000159415.2|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like 	ENSMUST00000163067.2|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like
mm10_v2_chr14_+_31001414_31001464	0.0824028	Rfx3_Rfx1_Rfx4	ENSMUST00000022476.7|Glt8d1|ENSMUSG00000021916.9|glycosyltransferase 8 domain containing 1
mm10_v2_chr17_+_33955902_33955926	0.0819338	Rfx3_Rfx1_Rfx4	ENSMUST00000173196.2|Vps52|ENSMUSG00000024319.11|vacuolar protein sorting 52 (yeast)
mm10_v2_chr2_-_151744142_151744205	0.0805665	Rfx3_Rfx1_Rfx4	ENSMUST00000109869.1|Psmf1|ENSMUSG00000032869.9|proteasome (prosome, macropain) inhibitor subunit 1
mm10_v2_chr16_-_33056174_33056218	0.0803321	Rfx3_Rfx1_Rfx4	ENSMUST00000115100.1|Iqcg|ENSMUSG00000035578.9|IQ motif containing G 	ENSMUST00000040309.8|Iqcg|ENSMUSG00000035578.9|IQ motif containing G
mm10_v2_chr2_+_27009926_27009935	0.0802264	Rfx3_Rfx1_Rfx4	ENSMUST00000114005.2|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1 	ENSMUST00000114004.1|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1 	ENSMUST00000114006.1|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1 	ENSMUST00000114007.1|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1
mm10_v2_chr4_-_129600586_129600599	0.0795269	Rfx3_Rfx1_Rfx4	ENSMUST00000135055.1|Eif3i|ENSMUSG00000028798.10|eukaryotic translation initiation factor 3, subunit I
mm10_v2_chr15_+_79229140_79229173	0.0794875	Rfx3_Rfx1_Rfx4	ENSMUST00000163571.1|Pick1|ENSMUSG00000068206.6|protein interacting with C kinase 1
mm10_v2_chr11_+_45980309_45980337	0.0790188	Rfx3_Rfx1_Rfx4	ENSMUST00000049038.3|Sox30|ENSMUSG00000040489.5|SRY-box containing gene 30
mm10_v2_chr4_-_129600642_129600653	0.078434	Rfx3_Rfx1_Rfx4	ENSMUST00000102593.4|Eif3i|ENSMUSG00000028798.10|eukaryotic translation initiation factor 3, subunit I
mm10_v2_chr1_+_75521521_75521602	0.0771227	Rfx3_Rfx1_Rfx4	ENSMUST00000027414.9|Stk11ip|ENSMUSG00000026213.9|serine/threonine kinase 11 interacting protein 	ENSMUST00000113553.1|Stk11ip|ENSMUSG00000026213.9|serine/threonine kinase 11 interacting protein
mm10_v2_chr7_+_24547150_24547244	0.076804	Rfx3_Rfx1_Rfx4	ENSMUST00000063249.8|Xrcc1|ENSMUSG00000051768.8|X-ray repair complementing defective repair in Chinese hamster cells 1
mm10_v2_chr4_-_141664063_141664170	0.0756757	Rfx3_Rfx1_Rfx4	ENSMUST00000084203.4|Plekhm2|ENSMUSG00000028917.8|pleckstrin homology domain containing, family M (with RUN domain) member 2
mm10_v2_chr10_+_62449489_62449489	0.0755323	Rfx3_Rfx1_Rfx4	ENSMUST00000181110.1|4930507D05Rik|ENSMUSG00000097129.1|RIKEN cDNA 4930507D05 gene
mm10_v2_chr8_+_66511732_66511743	0.0755262	Rfx3_Rfx1_Rfx4	ENSMUST00000002025.3|Tktl2|ENSMUSG00000025519.4|transketolase-like 2
mm10_v2_chr8_+_85060055_85060135	0.0755059	Rfx3_Rfx1_Rfx4	ENSMUST00000095220.3|Fbxw9|ENSMUSG00000008167.8|F-box and WD-40 domain protein 9
mm10_v2_chr9_-_41004562_41004586	0.075176	Rfx3_Rfx1_Rfx4	ENSMUST00000034519.6|Crtam|ENSMUSG00000032021.7|cytotoxic and regulatory T cell molecule
mm10_v2_chr8_-_45975224_45975281	0.0748419	Rfx3_Rfx1_Rfx4	ENSMUST00000095323.1|1700029J07Rik|ENSMUSG00000071103.3|RIKEN cDNA 1700029J07 gene 	ENSMUST00000098786.2|1700029J07Rik|ENSMUSG00000071103.3|RIKEN cDNA 1700029J07 gene
mm10_v2_chr4_-_133545906_133546011	0.07411	Rfx3_Rfx1_Rfx4	ENSMUST00000030665.6|Nudc|ENSMUSG00000028851.6|nuclear distribution gene C homolog (Aspergillus)
mm10_v2_chr2_-_163645125_163645136	0.0739619	Rfx3_Rfx1_Rfx4	ENSMUST00000017851.3|Serinc3|ENSMUSG00000017707.9|serine incorporator 3
mm10_v2_chr18_-_23041641_23041671	0.0736565	Rfx3_Rfx1_Rfx4	ENSMUST00000097651.3|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr2_-_92024502_92024529	0.0734035	Rfx3_Rfx1_Rfx4	ENSMUST00000028663.4|Creb3l1|ENSMUSG00000027230.9|cAMP responsive element binding protein 3-like 1
mm10_v2_chrX_-_134600976_134601125	0.0723472	Rfx3_Rfx1_Rfx4	ENSMUST00000033621.6|Gla|ENSMUSG00000031266.6|galactosidase, alpha
mm10_v2_chr9_-_21760275_21760294	0.0713034	Rfx3_Rfx1_Rfx4	ENSMUST00000098942.4|Spc24|ENSMUSG00000074476.5|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm10_v2_chr9_+_98563704_98563737	0.0708668	Rfx3_Rfx1_Rfx4	ENSMUST00000035033.5|Copb2|ENSMUSG00000032458.5|coatomer protein complex, subunit beta 2 (beta prime)
mm10_v2_chr1_+_92906959_92907036	0.0706097	Rfx3_Rfx1_Rfx4	ENSMUST00000060913.6|Dusp28|ENSMUSG00000047067.6|dual specificity phosphatase 28
mm10_v2_chr2_+_32629467_32629514	0.0705281	Rfx3_Rfx1_Rfx4	ENSMUST00000068271.4|Ak1|ENSMUSG00000026817.8|adenylate kinase 1
mm10_v2_chr14_+_50944499_50944514	0.0701376	Rfx3_Rfx1_Rfx4	ENSMUST00000178092.1|Pnp|ENSMUSG00000021871.11|purine-nucleoside phosphorylase
mm10_v2_chr15_-_78174090_78174109	0.0701076	Rfx3_Rfx1_Rfx4	ENSMUST00000016781.6|Ift27|ENSMUSG00000016637.6|intraflagellar transport 27
mm10_v2_chr2_-_18998126_18998202	0.0699039	Rfx3_Rfx1_Rfx4	ENSMUST00000006912.5|Pip4k2a|ENSMUSG00000026737.6|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
mm10_v2_chr17_+_34629533_34629620	0.0694814	Rfx3_Rfx1_Rfx4	ENSMUST00000015620.6|Prrt1|ENSMUSG00000015476.6|proline-rich transmembrane protein 1
mm10_v2_chr7_+_12978238_12978285	0.0686113	Rfx3_Rfx1_Rfx4	ENSMUST00000108536.1|Zfp446|ENSMUSG00000033961.9|zinc finger protein 446
mm10_v2_chr19_-_8929323_8929356	0.0684126	Rfx3_Rfx1_Rfx4	ENSMUST00000096242.3|Rom1|ENSMUSG00000071648.3|rod outer segment membrane protein 1
mm10_v2_chr4_-_121017201_121017261	0.0680975	Rfx3_Rfx1_Rfx4	ENSMUST00000043200.7|Smap2|ENSMUSG00000032870.8|small ArfGAP 2
mm10_v2_chr12_+_105032638_105032705	0.0680186	Rfx3_Rfx1_Rfx4	ENSMUST00000021522.3|Glrx5|ENSMUSG00000021102.3|glutaredoxin 5 homolog (S. cerevisiae)
mm10_v2_chr9_+_78051938_78051958	0.0677566	Rfx3_Rfx1_Rfx4	ENSMUST00000024104.7|Gcm1|ENSMUSG00000023333.7|glial cells missing homolog 1 (Drosophila)
mm10_v2_chr15_-_79658749_79658798	0.0672875	Rfx3_Rfx1_Rfx4	ENSMUST00000109646.2|Fam227a|ENSMUSG00000042564.6|family with sequence similarity 227, member A
mm10_v2_chr11_-_60777241_60777365	0.0672221	Rfx3_Rfx1_Rfx4	ENSMUST00000120417.1|Top3a|ENSMUSG00000002814.9|topoisomerase (DNA) III alpha 	ENSMUST00000102668.3|Top3a|ENSMUSG00000002814.9|topoisomerase (DNA) III alpha 	ENSMUST00000117743.1|Top3a|ENSMUSG00000002814.9|topoisomerase (DNA) III alpha 	ENSMUST00000130068.1|Top3a|ENSMUSG00000002814.9|topoisomerase (DNA) III alpha 	ENSMUST00000002891.4|Top3a|ENSMUSG00000002814.9|topoisomerase (DNA) III alpha
mm10_v2_chr2_-_134644019_134644042	0.0669804	Rfx3_Rfx1_Rfx4	ENSMUST00000110120.1|Tmx4|ENSMUSG00000034723.5|thioredoxin-related transmembrane protein 4
mm10_v2_chr13_+_108158723_108158754	0.0668087	Rfx3_Rfx1_Rfx4	ENSMUST00000054835.8|Ercc8|ENSMUSG00000021694.12|excision repaiross-complementing rodent repair deficiency, complementation group 8 	ENSMUST00000120672.1|Ercc8|ENSMUSG00000021694.12|excision repaiross-complementing rodent repair deficiency, complementation group 8
mm10_v2_chr14_-_70153811_70153846	0.0665851	Rfx3_Rfx1_Rfx4	ENSMUST00000035612.5|Ccar2|ENSMUSG00000033712.5|cell cycle activator and apoptosis regulator 2
mm10_v2_chr2_-_30178422_30178473	0.0663041	Rfx3_Rfx1_Rfx4	ENSMUST00000100220.4|D2Wsu81e|ENSMUSG00000039660.10|DNA segment, Chr 2, Wayne State University 81, expressed 	ENSMUST00000179795.1|D2Wsu81e|ENSMUSG00000039660.10|DNA segment, Chr 2, Wayne State University 81, expressed
mm10_v2_chr4_-_149774238_149774279	0.0661784	Rfx3_Rfx1_Rfx4	ENSMUST00000105686.2|Slc25a33|ENSMUSG00000028982.9|solute carrier family 25, member 33
mm10_v2_chr1_+_139454747_139454825	0.0660693	Rfx3_Rfx1_Rfx4	ENSMUST00000053364.8|Aspm|ENSMUSG00000033952.8|asp (abnormal spindle)-like, microcephaly associated (Drosophila) 	ENSMUST00000097554.3|Aspm|ENSMUSG00000033952.8|asp (abnormal spindle)-like, microcephaly associated (Drosophila)
mm10_v2_chr3_+_90079540_90079715	0.0658685	Rfx3_Rfx1_Rfx4	ENSMUST00000029549.9|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000118566.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000119158.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma
mm10_v2_chr6_+_91473695_91473787	0.0650087	Rfx3_Rfx1_Rfx4	ENSMUST00000032183.4|Tmem43|ENSMUSG00000030095.4|transmembrane protein 43
mm10_v2_chr8_+_33731867_33731946	0.0647729	Rfx3_Rfx1_Rfx4	ENSMUST00000170705.1|Gtf2e2|ENSMUSG00000031585.7|general transcription factor II E, polypeptide 2 (beta subunit)
mm10_v2_chr8_-_89187560_89187560	0.0634306	Rfx3_Rfx1_Rfx4	ENSMUST00000093326.2|Gm5356|ENSMUSG00000069962.2|predicted pseudogene 5356
mm10_v2_chr16_-_36874806_36874862	0.0632968	Rfx3_Rfx1_Rfx4	ENSMUST00000075946.5|Eaf2|ENSMUSG00000022838.7|ELL associated factor 2
mm10_v2_chr2_+_90904740_90904778	0.0625469	Rfx3_Rfx1_Rfx4	ENSMUST00000111464.1|Kbtbd4|ENSMUSG00000005505.6|kelch repeat and BTB (POZ) domain containing 4 	ENSMUST00000090682.3|Kbtbd4|ENSMUSG00000005505.6|kelch repeat and BTB (POZ) domain containing 4
mm10_v2_chr10_-_42018363_42018436	0.0622214	Rfx3_Rfx1_Rfx4	ENSMUST00000162405.1|Armc2|ENSMUSG00000071324.5|armadillo repeat containing 2 	ENSMUST00000095729.4|Armc2|ENSMUSG00000071324.5|armadillo repeat containing 2 	ENSMUST00000161081.1|Armc2|ENSMUSG00000071324.5|armadillo repeat containing 2 	ENSMUST00000160262.2|Armc2|ENSMUSG00000071324.5|armadillo repeat containing 2
mm10_v2_chr16_-_91728701_91728802	0.062207	Rfx3_Rfx1_Rfx4	ENSMUST00000114023.2|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1 	ENSMUST00000117644.1|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr17_-_45474839_45474938	0.061768	Rfx3_Rfx1_Rfx4	ENSMUST00000024731.8|Spats1|ENSMUSG00000023935.9|spermatogenesis associated, serine-rich 1
mm10_v2_chr8_+_33732237_33732339	0.0616255	Rfx3_Rfx1_Rfx4	ENSMUST00000171010.1|Gtf2e2|ENSMUSG00000031585.7|general transcription factor II E, polypeptide 2 (beta subunit)
mm10_v2_chr10_+_33905015_33905111	0.0615862	Rfx3_Rfx1_Rfx4	ENSMUST00000169670.1|Rsph4a|ENSMUSG00000039552.7|radial spoke head 4 homolog A (Chlamydomonas)
mm10_v2_chr5_-_139460501_139460549	0.0613151	Rfx3_Rfx1_Rfx4	ENSMUST00000066052.7|3110082I17Rik|ENSMUSG00000053553.7|RIKEN cDNA 3110082I17 gene
mm10_v2_chr5_-_30545836_30545852	0.0608052	Rfx3_Rfx1_Rfx4	ENSMUST00000065486.2|Cib4|ENSMUSG00000053194.2|calcium and integrin binding family member 4
mm10_v2_chr2_+_29788237_29788302	0.0604443	Rfx3_Rfx1_Rfx4	ENSMUST00000028137.3|Coq4|ENSMUSG00000026798.4|coenzyme Q4 homolog (yeast) 	ENSMUST00000148791.1|Coq4|ENSMUSG00000026798.4|coenzyme Q4 homolog (yeast)
mm10_v2_chr3_+_37312514_37312575	0.0599745	Rfx3_Rfx1_Rfx4	ENSMUST00000057975.7|Bbs12|ENSMUSG00000051444.9|Bardet-Biedl syndrome 12 (human) 	ENSMUST00000108121.3|Bbs12|ENSMUSG00000051444.9|Bardet-Biedl syndrome 12 (human)
mm10_v2_chr17_+_27685197_27685233	0.0599043	Rfx3_Rfx1_Rfx4	ENSMUST00000097360.2|Pacsin1|ENSMUSG00000040276.8|protein kinase C and casein kinase substrate in neurons 1
mm10_v2_chr1_+_21349598_21349641	0.0594826	Rfx3_Rfx1_Rfx4	ENSMUST00000088407.3|Khdc1a|ENSMUSG00000067750.3|KH domain containing 1A
mm10_v2_chr6_-_83156393_83156400	0.0589067	Rfx3_Rfx1_Rfx4	ENSMUST00000153148.1|Wdr54|ENSMUSG00000030032.6|WD repeat domain 54 	ENSMUST00000125894.1|Wdr54|ENSMUSG00000030032.6|WD repeat domain 54
mm10_v2_chr2_-_121271315_121271322	0.0587943	Rfx3_Rfx1_Rfx4	ENSMUST00000131245.1|Trp53bp1|ENSMUSG00000043909.10|transformation related protein 53 binding protein 1
mm10_v2_chr2_+_153161303_153161339	0.0585197	Rfx3_Rfx1_Rfx4	ENSMUST00000089027.2|Tm9sf4|ENSMUSG00000068040.4|transmembrane 9 superfamily protein member 4
mm10_v2_chr13_+_41148796_41148796	0.0578944	Rfx3_Rfx1_Rfx4	ENSMUST00000141292.1|Sycp2l|ENSMUSG00000038651.8|synaptonemal complex protein 2-like
mm10_v2_chr2_+_3336159_3336174	0.0570034	Rfx3_Rfx1_Rfx4	ENSMUST00000115089.1|Acbd7|ENSMUSG00000026644.6|acyl-Coenzyme A binding domain containing 7
mm10_v2_chr12_+_17544873_17544951	0.056749	Rfx3_Rfx1_Rfx4	ENSMUST00000171737.1|Odc1|ENSMUSG00000011179.7|ornithine decarboxylase, structural 1
mm10_v2_chr7_+_67222544_67222635	0.0566897	Rfx3_Rfx1_Rfx4	ENSMUST00000058771.5|Lysmd4|ENSMUSG00000043831.5|LysM, putative peptidoglycan-binding, domain containing 4 	ENSMUST00000179106.1|Lysmd4|ENSMUSG00000043831.5|LysM, putative peptidoglycan-binding, domain containing 4
mm10_v2_chr8_+_66511751_66511764	0.0562841	Rfx3_Rfx1_Rfx4	ENSMUST00000183187.1|Tktl2|ENSMUSG00000025519.4|transketolase-like 2
mm10_v2_chr4_-_95052170_95052181	0.0561004	Rfx3_Rfx1_Rfx4	ENSMUST00000058555.2|Jun|ENSMUSG00000052684.3|Jun oncogene
mm10_v2_chr5_+_24586721_24586794	0.0548814	Rfx3_Rfx1_Rfx4	ENSMUST00000121863.1|Chpf2|ENSMUSG00000038181.10|chondroitin polymerizing factor 2 	ENSMUST00000088295.4|Chpf2|ENSMUSG00000038181.10|chondroitin polymerizing factor 2
mm10_v2_chr11_-_78245942_78245987	0.0547251	Rfx3_Rfx1_Rfx4	ENSMUST00000002121.4|Supt6|ENSMUSG00000002052.6|suppressor of Ty 6
mm10_v2_chr11_+_76407143_76407201	0.0544632	Rfx3_Rfx1_Rfx4	ENSMUST00000021203.6|Timm22|ENSMUSG00000020843.9|translocase of inner mitochondrial membrane 22 	ENSMUST00000152183.1|Timm22|ENSMUSG00000020843.9|translocase of inner mitochondrial membrane 22
mm10_v2_chr2_-_75981967_75981967	0.0540934	Rfx3_Rfx1_Rfx4	ENSMUST00000099994.3|Ttc30a1|ENSMUSG00000075271.3|tetratricopeptide repeat domain 30A1
mm10_v2_chr8_+_33732049_33732137	0.0536924	Rfx3_Rfx1_Rfx4	ENSMUST00000167264.1|Gtf2e2|ENSMUSG00000031585.7|general transcription factor II E, polypeptide 2 (beta subunit)
mm10_v2_chr17_+_24896488_24896530	0.0530626	Rfx3_Rfx1_Rfx4	ENSMUST00000024978.6|Nme3|ENSMUSG00000073435.4|NME/NM23 nucleoside diphosphate kinase 3
mm10_v2_chr13_-_49309217_49309257	0.0530197	Rfx3_Rfx1_Rfx4	ENSMUST00000110087.2|Fgd3|ENSMUSG00000037946.5|FYVE, RhoGEF and PH domain containing 3
mm10_v2_chr17_-_84466186_84466245	0.0529614	Rfx3_Rfx1_Rfx4	ENSMUST00000047524.8|Thada|ENSMUSG00000024251.9|thyroid adenoma associated
mm10_v2_chr7_+_122067164_122067216	0.0522584	Rfx3_Rfx1_Rfx4	ENSMUST00000033158.4|Ubfd1|ENSMUSG00000030870.6|ubiquitin family domain containing 1
mm10_v2_chr7_-_67222412_67222458	0.0522149	Rfx3_Rfx1_Rfx4	ENSMUST00000181631.1|1700112J16Rik|ENSMUSG00000097527.1|RIKEN cDNA 1700112J16 gene
mm10_v2_chr3_+_68468162_68468209	0.0518396	Rfx3_Rfx1_Rfx4	ENSMUST00000182532.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr10_-_62726086_62726128	0.0517465	Rfx3_Rfx1_Rfx4	ENSMUST00000133371.1|Stox1|ENSMUSG00000036923.6|storkhead box 1
mm10_v2_chr1_+_172481788_172481819	0.0512557	Rfx3_Rfx1_Rfx4	ENSMUST00000127052.1|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9
mm10_v2_chr1_-_31222644_31222677	0.050727	Rfx3_Rfx1_Rfx4	ENSMUST00000135245.1|4931428L18Rik|ENSMUSG00000086727.1|RIKEN cDNA 4931428L18 gene
mm10_v2_chrX_+_7884244_7884313	0.0504755	Rfx3_Rfx1_Rfx4	ENSMUST00000115663.3|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2
mm10_v2_chr19_+_45560569_45560644	0.0499437	Rfx3_Rfx1_Rfx4	ENSMUST00000047057.7|Dpcd|ENSMUSG00000041035.7|deleted in primary ciliary dyskinesia
mm10_v2_chr17_-_34627148_34627191	0.0496355	Rfx3_Rfx1_Rfx4	ENSMUST00000171376.1|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000169287.1|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2
mm10_v2_chr3_-_116508071_116508208	0.0496053	Rfx3_Rfx1_Rfx4	ENSMUST00000000348.8|Rtca|ENSMUSG00000000339.8|RNA 3'-terminal phosphate cyclase
mm10_v2_chr14_+_58893465_58893506	0.0495553	Rfx3_Rfx1_Rfx4	ENSMUST00000079960.1|Rpl13-ps3|ENSMUSG00000059835.1|ribosomal protein L13, pseudogene 3
mm10_v2_chr10_+_110745433_110745572	0.0492686	Rfx3_Rfx1_Rfx4	ENSMUST00000174857.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000073781.5|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000173471.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000173634.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7
mm10_v2_chr9_-_105395237_105395289	0.0487481	Rfx3_Rfx1_Rfx4	ENSMUST00000140851.1|Nek11|ENSMUSG00000035032.5|NIMA (never in mitosis gene a)-related expressed kinase 11
mm10_v2_chr2_+_164497518_164497560	0.0452745	Rfx3_Rfx1_Rfx4	ENSMUST00000103101.4|Pigt|ENSMUSG00000017721.9|phosphatidylinositol glycan anchor biosynthesis, class T 	ENSMUST00000117066.1|Pigt|ENSMUSG00000017721.9|phosphatidylinositol glycan anchor biosynthesis, class T
mm10_v2_chr2_+_36136384_36136428	0.0447077	Rfx3_Rfx1_Rfx4	ENSMUST00000028250.2|Mrrf|ENSMUSG00000026887.3|mitochondrial ribosome recycling factor
mm10_v2_chr14_-_56778301_56778352	0.0435742	Rfx3_Rfx1_Rfx4	ENSMUST00000022507.5|Pspc1|ENSMUSG00000021938.5|paraspeckle protein 1 	ENSMUST00000163924.1|Pspc1|ENSMUSG00000021938.5|paraspeckle protein 1
mm10_v2_chr2_+_32757234_32757319	0.0434736	Rfx3_Rfx1_Rfx4	ENSMUST00000009707.7|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A 	ENSMUST00000177382.1|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A 	ENSMUST00000140999.1|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A
mm10_v2_chr2_+_136532266_136532287	0.0428236	Rfx3_Rfx1_Rfx4	ENSMUST00000121717.1|Ankef1|ENSMUSG00000074771.4|ankyrin repeat and EF-hand domain containing 1
mm10_v2_chr4_+_129600670_129600715	0.0427682	Rfx3_Rfx1_Rfx4	ENSMUST00000102591.3|Tmem234|ENSMUSG00000028797.14|transmembrane protein 234 	ENSMUST00000181579.1|Tmem234|ENSMUSG00000028797.14|transmembrane protein 234 	ENSMUST00000173758.1|Tmem234|ENSMUSG00000028797.14|transmembrane protein 234
mm10_v2_chr4_-_62408618_62408643	0.0419655	Rfx3_Rfx1_Rfx4	ENSMUST00000107459.1|Cdc26|ENSMUSG00000066149.5|cell division cycle 26 	ENSMUST00000084525.5|Cdc26|ENSMUSG00000066149.5|cell division cycle 26
mm10_v2_chr11_+_120467635_120467719	0.0417561	Rfx3_Rfx1_Rfx4	ENSMUST00000140862.1|Hgs|ENSMUSG00000025793.9|HGF-regulated tyrosine kinase substrate 	ENSMUST00000106205.1|Hgs|ENSMUSG00000025793.9|HGF-regulated tyrosine kinase substrate 	ENSMUST00000106203.1|Hgs|ENSMUSG00000025793.9|HGF-regulated tyrosine kinase substrate 	ENSMUST00000026900.7|Hgs|ENSMUSG00000025793.9|HGF-regulated tyrosine kinase substrate
mm10_v2_chr14_-_31001588_31001672	0.0409889	Rfx3_Rfx1_Rfx4	ENSMUST00000162092.1|Spcs1|ENSMUSG00000021917.8|signal peptidase complex subunit 1 homolog (S. cerevisiae) 	ENSMUST00000160342.1|Spcs1|ENSMUSG00000021917.8|signal peptidase complex subunit 1 homolog (S. cerevisiae)
mm10_v2_chr17_+_56717759_56717819	0.0408881	Rfx3_Rfx1_Rfx4	ENSMUST00000002452.6|Ndufa11|ENSMUSG00000002379.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11
mm10_v2_chr4_+_152096719_152096782	0.0407667	Rfx3_Rfx1_Rfx4	ENSMUST00000105661.3|Plekhg5|ENSMUSG00000039713.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 5 	ENSMUST00000084115.3|Plekhg5|ENSMUSG00000039713.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 5
mm10_v2_chr8_+_66386292_66386308	0.0407348	Rfx3_Rfx1_Rfx4	ENSMUST00000039540.5|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110253.2|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr13_-_38635036_38635119	0.040693	Rfx3_Rfx1_Rfx4	ENSMUST00000035899.6|Bloc1s5|ENSMUSG00000038982.9|biogenesis of organelles complex-1, subunit 5, muted
mm10_v2_chr8_+_47713266_47713266	0.0393248	Rfx3_Rfx1_Rfx4	ENSMUST00000180928.1|E030037K01Rik|ENSMUSG00000097706.1|RIKEN cDNA E030037K01 gene
mm10_v2_chr8_-_33747724_33747781	0.0390579	Rfx3_Rfx1_Rfx4	ENSMUST00000179364.1|Smim18|ENSMUSG00000094500.1|small integral membrane protein 18
mm10_v2_chr7_+_126487344_126487390	0.0387027	Rfx3_Rfx1_Rfx4	ENSMUST00000098048.4|Tufm|ENSMUSG00000073838.4|Tu translation elongation factor, mitochondrial 	ENSMUST00000106392.3|Tufm|ENSMUSG00000073838.4|Tu translation elongation factor, mitochondrial
mm10_v2_chr11_-_69549108_69549108	0.0386681	Rfx3_Rfx1_Rfx4	ENSMUST00000108659.1|Dnah2|ENSMUSG00000005237.7|dynein, axonemal, heavy chain 2
mm10_v2_chr7_+_44857309_44857354	0.0384782	Rfx3_Rfx1_Rfx4	ENSMUST00000098478.3|Pnkp|ENSMUSG00000002963.10|polynucleotide kinase 3'- phosphatase
mm10_v2_chr4_+_126096623_126096708	0.0382907	Rfx3_Rfx1_Rfx4	ENSMUST00000055575.7|Lsm10|ENSMUSG00000050188.8|U7 snRNP-specific Sm-like protein LSM10 	ENSMUST00000179323.1|Lsm10|ENSMUSG00000050188.8|U7 snRNP-specific Sm-like protein LSM10 	ENSMUST00000151831.1|Lsm10|ENSMUSG00000050188.8|U7 snRNP-specific Sm-like protein LSM10
mm10_v2_chr3_-_116508035_116508070	0.0376552	Rfx3_Rfx1_Rfx4	ENSMUST00000153005.1|Rtca|ENSMUSG00000000339.8|RNA 3'-terminal phosphate cyclase
mm10_v2_chr15_-_83122756_83122801	0.037327	Rfx3_Rfx1_Rfx4	ENSMUST00000018184.3|Rrp7a|ENSMUSG00000018040.3|ribosomal RNA processing 7 homolog A (S. cerevisiae)
mm10_v2_chr8_+_94667082_94667226	0.036761	Rfx3_Rfx1_Rfx4	ENSMUST00000109527.4|Arl2bp|ENSMUSG00000031776.10|ADP-ribosylation factor-like 2 binding protein
mm10_v2_chr1_+_69826986_69827003	0.0367257	Rfx3_Rfx1_Rfx4	ENSMUST00000065425.5|Spag16|ENSMUSG00000053153.8|sperm associated antigen 16 	ENSMUST00000113940.2|Spag16|ENSMUSG00000053153.8|sperm associated antigen 16
mm10_v2_chr8_+_36993551_36993611	0.0365699	Rfx3_Rfx1_Rfx4	ENSMUST00000098825.3|AI429214|ENSMUSG00000074384.3|expressed sequence AI429214
mm10_v2_chr17_-_34627365_34627525	0.0363399	Rfx3_Rfx1_Rfx4	ENSMUST00000064953.8|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000170345.1|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000171121.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000168391.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000169067.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2
mm10_v2_chr6_-_91473361_91473470	0.0362162	Rfx3_Rfx1_Rfx4	ENSMUST00000040835.7|Chchd4|ENSMUSG00000034203.7|coiled-coil-helix-coiled-coil-helix domain containing 4
mm10_v2_chr3_+_156561792_156561869	0.0360665	Rfx3_Rfx1_Rfx4	ENSMUST00000074015.4|Negr1|ENSMUSG00000040037.7|neuronal growth regulator 1
mm10_v2_chr14_+_8666369_8666413	0.0357245	Rfx3_Rfx1_Rfx4	ENSMUST00000181914.1|4930455B14Rik|ENSMUSG00000097898.1|RIKEN cDNA 4930455B14 gene 	ENSMUST00000180444.1|4930455B14Rik|ENSMUSG00000097898.1|RIKEN cDNA 4930455B14 gene
mm10_v2_chr3_-_30647793_30647876	0.0354973	Rfx3_Rfx1_Rfx4	ENSMUST00000029252.7|Lrrc34|ENSMUSG00000027702.7|leucine rich repeat containing 34
mm10_v2_chr11_+_70562840_70562897	0.0351702	Rfx3_Rfx1_Rfx4	ENSMUST00000072237.6|Mink1|ENSMUSG00000020827.12|misshapen-like kinase 1 (zebrafish) 	ENSMUST00000072873.7|Mink1|ENSMUSG00000020827.12|misshapen-like kinase 1 (zebrafish)
mm10_v2_chr11_-_85850333_85850333	0.0351086	Rfx3_Rfx1_Rfx4	ENSMUST00000146433.1|Gm11444|ENSMUSG00000069785.4|predicted gene 11444
mm10_v2_chr16_+_4741543_4741592	0.0347583	Rfx3_Rfx1_Rfx4	ENSMUST00000120232.1|Hmox2|ENSMUSG00000004070.9|heme oxygenase (decycling) 2
mm10_v2_chr12_+_72441933_72441970	0.0340677	Rfx3_Rfx1_Rfx4	ENSMUST00000161284.1|Lrrc9|ENSMUSG00000021090.9|leucine rich repeat containing 9
mm10_v2_chr7_+_19176416_19176440	0.0340021	Rfx3_Rfx1_Rfx4	ENSMUST00000117338.1|Eml2|ENSMUSG00000040811.9|echinoderm microtubule associated protein like 2
mm10_v2_chr14_-_31001311_31001389	0.0322678	Rfx3_Rfx1_Rfx4	ENSMUST00000161219.1|Spcs1|ENSMUSG00000021917.8|signal peptidase complex subunit 1 homolog (S. cerevisiae) 	ENSMUST00000182501.1|Spcs1|ENSMUSG00000021917.8|signal peptidase complex subunit 1 homolog (S. cerevisiae)
mm10_v2_chr7_+_44857137_44857190	0.0320768	Rfx3_Rfx1_Rfx4	ENSMUST00000107876.1|Pnkp|ENSMUSG00000002963.10|polynucleotide kinase 3'- phosphatase 	ENSMUST00000003044.7|Pnkp|ENSMUSG00000002963.10|polynucleotide kinase 3'- phosphatase 	ENSMUST00000154968.1|Pnkp|ENSMUSG00000002963.10|polynucleotide kinase 3'- phosphatase
mm10_v2_chr16_+_32419696_32419753	0.0318395	Rfx3_Rfx1_Rfx4	ENSMUST00000014220.8|Tctex1d2|ENSMUSG00000014075.9|Tctex1 domain containing 2 	ENSMUST00000080316.7|Tctex1d2|ENSMUSG00000014075.9|Tctex1 domain containing 2
mm10_v2_chr5_+_66259890_66259912	0.0314156	Rfx3_Rfx1_Rfx4	ENSMUST00000065530.6|Nsun7|ENSMUSG00000029206.7|NOL1/NOP2/Sun domain family, member 7
mm10_v2_chr5_+_134099704_134099760	0.029965	Rfx3_Rfx1_Rfx4	ENSMUST00000016088.8|Gatsl2|ENSMUSG00000015944.8|GATS protein-like 2
mm10_v2_chr11_+_90638127_90638207	0.0299196	Rfx3_Rfx1_Rfx4	ENSMUST00000020851.8|Cox11|ENSMUSG00000020544.8|cytochrome c oxidase assembly protein 11
mm10_v2_chr13_+_49504774_49504816	0.0298936	Rfx3_Rfx1_Rfx4	ENSMUST00000051504.7|Ecm2|ENSMUSG00000043631.7|extracellular matrix protein 2, female organ and adipocyte specific
mm10_v2_chr7_+_44748640_44748651	0.0289975	Rfx3_Rfx1_Rfx4	ENSMUST00000165957.1|Vrk3|ENSMUSG00000002205.9|vaccinia related kinase 3 	ENSMUST00000144515.2|Vrk3|ENSMUSG00000002205.9|vaccinia related kinase 3
mm10_v2_chr4_+_138434647_138434748	0.0284132	Rfx3_Rfx1_Rfx4	ENSMUST00000044058.4|Mul1|ENSMUSG00000041241.6|mitochondrial ubiquitin ligase activator of NFKB 1 	ENSMUST00000105813.1|Mul1|ENSMUSG00000041241.6|mitochondrial ubiquitin ligase activator of NFKB 1 	ENSMUST00000105815.1|Mul1|ENSMUSG00000041241.6|mitochondrial ubiquitin ligase activator of NFKB 1
mm10_v2_chr9_-_51328898_51328923	0.0276079	Rfx3_Rfx1_Rfx4	ENSMUST00000039959.4|1810046K07Rik|ENSMUSG00000036027.5|RIKEN cDNA 1810046K07 gene
mm10_v2_chr8_+_95534078_95534123	0.0275706	Rfx3_Rfx1_Rfx4	ENSMUST00000041569.3|Ccdc113|ENSMUSG00000036598.3|coiled-coil domain containing 113
mm10_v2_chr11_+_58171648_58171688	0.0273978	Rfx3_Rfx1_Rfx4	ENSMUST00000020820.1|Mrpl22|ENSMUSG00000020514.2|mitochondrial ribosomal protein L22
mm10_v2_chr9_+_108479849_108479916	0.0270702	Rfx3_Rfx1_Rfx4	ENSMUST00000065014.4|Lamb2|ENSMUSG00000052911.4|laminin, beta 2
mm10_v2_chr15_+_102445367_102445403	0.0268258	Rfx3_Rfx1_Rfx4	ENSMUST00000023809.4|Amhr2|ENSMUSG00000023047.4|anti-Mullerian hormone type 2 receptor
mm10_v2_chr2_-_26380600_26380654	0.0264233	Rfx3_Rfx1_Rfx4	ENSMUST00000114115.2|Snapc4|ENSMUSG00000036281.7|small nuclear RNA activating complex, polypeptide 4 	ENSMUST00000035427.4|Snapc4|ENSMUSG00000036281.7|small nuclear RNA activating complex, polypeptide 4
mm10_v2_chr7_-_134364859_134364884	0.0262525	Rfx3_Rfx1_Rfx4	ENSMUST00000172947.1|D7Ertd443e|ENSMUSG00000030994.9|DNA segment, Chr 7, ERATO Doi 443, expressed
mm10_v2_chr6_+_55203381_55203459	0.0254213	Rfx3_Rfx1_Rfx4	ENSMUST00000053094.7|Fam188b|ENSMUSG00000038022.9|family with sequence similarity 188, member B
mm10_v2_chr2_-_25580099_25580099	0.0253284	Rfx3_Rfx1_Rfx4	ENSMUST00000114217.1|Gm996|ENSMUSG00000029419.7|predicted gene 996
mm10_v2_chr5_-_97392330_97392352	0.0251963	Rfx3_Rfx1_Rfx4	ENSMUST00000060265.4|Naa11|ENSMUSG00000046000.4|N(alpha)-acetyltransferase 11, NatA catalytic subunit
mm10_v2_chr15_+_80948484_80948549	0.0236324	Rfx3_Rfx1_Rfx4	ENSMUST00000023043.2|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase 	ENSMUST00000168756.1|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase 	ENSMUST00000164806.1|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase
mm10_v2_chr17_-_53463315_53463340	0.0234258	Rfx3_Rfx1_Rfx4	ENSMUST00000024725.4|Efhb|ENSMUSG00000023931.4|EF hand domain family, member B
mm10_v2_chr1_+_88211956_88211985	0.0224844	Rfx3_Rfx1_Rfx4	ENSMUST00000073049.6|Ugt1a1|ENSMUSG00000089960.1|UDP glucuronosyltransferase 1 family, polypeptide A1
mm10_v2_chr11_+_70166623_70166667	0.0224499	Rfx3_Rfx1_Rfx4	ENSMUST00000102571.3|Clec10a|ENSMUSG00000000318.10|C-type lectin domain family 10, member A 	ENSMUST00000178945.1|Clec10a|ENSMUSG00000000318.10|C-type lectin domain family 10, member A 	ENSMUST00000000327.6|Clec10a|ENSMUSG00000000318.10|C-type lectin domain family 10, member A
mm10_v2_chr12_-_85374696_85374719	0.0218674	Rfx3_Rfx1_Rfx4	ENSMUST00000040766.7|Tmed10|ENSMUSG00000021248.8|transmembrane emp24-like trafficking protein 10 (yeast)
mm10_v2_chr11_+_108587077_108587110	0.0216137	Rfx3_Rfx1_Rfx4	ENSMUST00000146912.2|Cep112|ENSMUSG00000020728.11|centrosomal protein 112
mm10_v2_chr14_-_41006882_41006976	0.0213356	Rfx3_Rfx1_Rfx4	ENSMUST00000152837.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A 	ENSMUST00000134715.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A
mm10_v2_chr15_+_30172570_30172600	0.0207894	Rfx3_Rfx1_Rfx4	ENSMUST00000081728.5|Ctnnd2|ENSMUSG00000022240.9|catenin (cadherin associated protein), delta 2
mm10_v2_chr5_+_73651376_73651394	0.020392	Rfx3_Rfx1_Rfx4	ENSMUST00000071077.7|Spata18|ENSMUSG00000029155.10|spermatogenesis associated 18 	ENSMUST00000178631.1|Spata18|ENSMUSG00000029155.10|spermatogenesis associated 18 	ENSMUST00000041422.8|Spata18|ENSMUSG00000029155.10|spermatogenesis associated 18
mm10_v2_chr8_-_71566641_71566652	0.0202374	Rfx3_Rfx1_Rfx4	ENSMUST00000163659.1|Nxnl1|ENSMUSG00000034829.7|nucleoredoxin-like 1
mm10_v2_chr15_+_98167806_98167873	0.0190985	Rfx3_Rfx1_Rfx4	ENSMUST00000031914.4|AI836003|ENSMUSG00000029875.4|expressed sequence AI836003
mm10_v2_chr11_-_66168505_66168533	0.018194	Rfx3_Rfx1_Rfx4	ENSMUST00000080665.3|Dnah9|ENSMUSG00000056752.10|dynein, axonemal, heavy chain 9
mm10_v2_chr15_-_75678732_75678805	0.0179896	Rfx3_Rfx1_Rfx4	ENSMUST00000000958.8|Top1mt|ENSMUSG00000000934.8|DNA topoisomerase 1, mitochondrial
mm10_v2_chr6_+_83109071_83109114	0.0177609	Rfx3_Rfx1_Rfx4	ENSMUST00000113938.3|Mrpl53|ENSMUSG00000030037.8|mitochondrial ribosomal protein L53
mm10_v2_chrX_+_7884022_7884055	0.0173304	Rfx3_Rfx1_Rfx4	ENSMUST00000115660.4|Slc35a2|ENSMUSG00000031156.11|solute carrier family 35 (UDP-galactose transporter), member A2
mm10_v2_chr18_+_23803962_23804054	0.0169909	Rfx3_Rfx1_Rfx4	ENSMUST00000025127.3|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
mm10_v2_chr3_-_89214378_89214430	0.0165621	Rfx3_Rfx1_Rfx4	ENSMUST00000073572.4|Mtx1|ENSMUSG00000064068.7|metaxin 1
mm10_v2_chr17_+_34837172_34837248	0.0164176	Rfx3_Rfx1_Rfx4	ENSMUST00000173995.1|Dxo|ENSMUSG00000040482.9|decapping exoribonuclease
mm10_v2_chr14_-_20452217_20452241	0.0163318	Rfx3_Rfx1_Rfx4	ENSMUST00000144797.1|Ttc18|ENSMUSG00000039543.9|tetratricopeptide repeat domain 18 	ENSMUST00000151077.1|Ttc18|ENSMUSG00000039543.9|tetratricopeptide repeat domain 18 	ENSMUST00000022348.7|Ttc18|ENSMUSG00000039543.9|tetratricopeptide repeat domain 18 	ENSMUST00000056073.6|Ttc18|ENSMUSG00000039543.9|tetratricopeptide repeat domain 18 	ENSMUST00000022349.6|Ttc18|ENSMUSG00000039543.9|tetratricopeptide repeat domain 18
mm10_v2_chr8_-_95281590_95281610	0.0157147	Rfx3_Rfx1_Rfx4	ENSMUST00000120044.2|Cngb1|ENSMUSG00000031789.10|cyclic nucleotide gated channel beta 1 	ENSMUST00000121162.2|Cngb1|ENSMUSG00000031789.10|cyclic nucleotide gated channel beta 1
mm10_v2_chr16_-_90810365_90810429	0.0150398	Rfx3_Rfx1_Rfx4	ENSMUST00000140920.1|Urb1|ENSMUSG00000039929.8|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
mm10_v2_chr4_-_43653542_43653557	0.0148598	Rfx3_Rfx1_Rfx4	ENSMUST00000084646.4|Spag8|ENSMUSG00000066196.5|sperm associated antigen 8
mm10_v2_chrX_+_153359613_153359613	0.0144642	Rfx3_Rfx1_Rfx4	ENSMUST00000039545.4|Klf8|ENSMUSG00000041649.7|Kruppel-like factor 8
mm10_v2_chr5_-_135778238_135778328	0.0142175	Rfx3_Rfx1_Rfx4	ENSMUST00000053906.4|Styxl1|ENSMUSG00000019178.11|serine/threonine/tyrosine interacting-like 1 	ENSMUST00000177559.1|Styxl1|ENSMUSG00000019178.11|serine/threonine/tyrosine interacting-like 1 	ENSMUST00000111161.2|Styxl1|ENSMUSG00000019178.11|serine/threonine/tyrosine interacting-like 1 	ENSMUST00000111162.1|Styxl1|ENSMUSG00000019178.11|serine/threonine/tyrosine interacting-like 1 	ENSMUST00000111163.2|Styxl1|ENSMUSG00000019178.11|serine/threonine/tyrosine interacting-like 1
mm10_v2_chr8_-_71381907_71381977	0.0139022	Rfx3_Rfx1_Rfx4	ENSMUST00000002466.8|Nr2f6|ENSMUSG00000002393.8|nuclear receptor subfamily 2, group F, member 6
mm10_v2_chr8_+_105701624_105701693	0.0138238	Rfx3_Rfx1_Rfx4	ENSMUST00000093195.6|Pard6a|ENSMUSG00000005699.9|par-6 (partitioning defective 6,) homolog alpha (C. elegans)
mm10_v2_chr19_-_6942406_6942450	0.0137221	Rfx3_Rfx1_Rfx4	ENSMUST00000099782.3|Gpr137|ENSMUSG00000024958.6|G protein-coupled receptor 137
mm10_v2_chr3_+_146450467_146450503	0.0127523	Rfx3_Rfx1_Rfx4	ENSMUST00000061937.6|Ctbs|ENSMUSG00000028189.6|chitobiase, di-N-acetyl- 	ENSMUST00000029840.3|Ctbs|ENSMUSG00000028189.6|chitobiase, di-N-acetyl-
mm10_v2_chr1_+_93685574_93685694	0.0127436	Rfx3_Rfx1_Rfx4	ENSMUST00000027499.6|Bok|ENSMUSG00000026278.8|BCL2-related ovarian killer protein
mm10_v2_chr19_+_6363896_6363941	0.0125884	Rfx3_Rfx1_Rfx4	ENSMUST00000113487.1|Sf1|ENSMUSG00000024949.11|splicing factor 1
mm10_v2_chr5_-_137046026_137046135	0.0123328	Rfx3_Rfx1_Rfx4	ENSMUST00000144303.1|Ap1s1|ENSMUSG00000004849.8|adaptor protein complex AP-1, sigma 1 	ENSMUST00000111080.1|Ap1s1|ENSMUSG00000004849.8|adaptor protein complex AP-1, sigma 1
mm10_v2_chr16_+_32673144_32673199	0.0123207	Rfx3_Rfx1_Rfx4	ENSMUST00000115122.2|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000115120.1|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000131238.1|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000115121.2|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2 	ENSMUST00000152361.1|Tnk2|ENSMUSG00000022791.10|tyrosine kinase, non-receptor, 2
mm10_v2_chr17_+_35879770_35879824	0.0120278	Rfx3_Rfx1_Rfx4	ENSMUST00000025292.8|Dhx16|ENSMUSG00000024422.8|DEAH (Asp-Glu-Ala-His) box polypeptide 16
mm10_v2_chr9_-_67559703_67559703	0.0119587	Rfx3_Rfx1_Rfx4	ENSMUST00000040025.7|Tln2|ENSMUSG00000052698.8|talin 2
mm10_v2_chr6_-_136875794_136875811	0.0111616	Rfx3_Rfx1_Rfx4	ENSMUST00000032342.1|Mgp|ENSMUSG00000030218.1|matrix Gla protein
mm10_v2_chr7_+_28179469_28179535	0.0111458	Rfx3_Rfx1_Rfx4	ENSMUST00000085901.6|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b 	ENSMUST00000172761.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr7_-_126583177_126583255	0.0110822	Rfx3_Rfx1_Rfx4	ENSMUST00000098036.2|Cln3|ENSMUSG00000030720.10|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) 	ENSMUST00000032962.4|Cln3|ENSMUSG00000030720.10|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm10_v2_chr10_+_23949516_23949516	0.0107014	Rfx3_Rfx1_Rfx4	ENSMUST00000045152.4|Taar3|ENSMUSG00000069708.2|trace amine-associated receptor 3
mm10_v2_chr2_+_21205719_21205787	0.0105356	Rfx3_Rfx1_Rfx4	ENSMUST00000054591.3|Thnsl1|ENSMUSG00000048550.11|threonine synthase-like 1 (bacterial) 	ENSMUST00000102952.1|Thnsl1|ENSMUSG00000048550.11|threonine synthase-like 1 (bacterial) 	ENSMUST00000138965.1|Thnsl1|ENSMUSG00000048550.11|threonine synthase-like 1 (bacterial) 	ENSMUST00000138914.1|Thnsl1|ENSMUSG00000048550.11|threonine synthase-like 1 (bacterial) 	ENSMUST00000102951.1|Thnsl1|ENSMUSG00000048550.11|threonine synthase-like 1 (bacterial)
mm10_v2_chr8_-_85555261_85555315	0.0104215	Rfx3_Rfx1_Rfx4	ENSMUST00000034138.5|Dnaja2|ENSMUSG00000031701.5|DnaJ (Hsp40) homolog, subfamily A, member 2
mm10_v2_chr11_+_70166696_70166731	0.0103191	Rfx3_Rfx1_Rfx4	ENSMUST00000178567.1|Clec10a|ENSMUSG00000000318.10|C-type lectin domain family 10, member A
mm10_v2_chr3_+_30647886_30647934	0.0100824	Rfx3_Rfx1_Rfx4	ENSMUST00000108265.2|Lrriq4|ENSMUSG00000027703.10|leucine-rich repeats and IQ motif containing 4
mm10_v2_chr6_-_100671126_100671178	0.00995614	Rfx3_Rfx1_Rfx4	ENSMUST00000089245.6|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae) 	ENSMUST00000113312.2|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae) 	ENSMUST00000170667.1|Shq1|ENSMUSG00000035378.11|SHQ1 homolog (S. cerevisiae)
mm10_v2_chr5_+_120431770_120431905	0.00959485	Rfx3_Rfx1_Rfx4	ENSMUST00000031591.7|Lhx5|ENSMUSG00000029595.7|LIM homeobox protein 5
mm10_v2_chr12_-_21417526_21417588	0.00957176	Rfx3_Rfx1_Rfx4	ENSMUST00000049531.9|Ywhaq|ENSMUSG00000076432.6|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 	ENSMUST00000155480.1|Ywhaq|ENSMUSG00000076432.6|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm10_v2_chr8_+_124231359_124231450	0.00935206	Rfx3_Rfx1_Rfx4	ENSMUST00000034458.8|Galnt2|ENSMUSG00000089704.3|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2
mm10_v2_chr17_-_34850162_34850210	0.00886893	Rfx3_Rfx1_Rfx4	ENSMUST00000046022.9|Skiv2l|ENSMUSG00000040356.10|superkiller viralicidic activity 2-like (S. cerevisiae)
mm10_v2_chr11_+_22512088_22512088	0.00799804	Rfx3_Rfx1_Rfx4	ENSMUST00000059319.7|Tmem17|ENSMUSG00000049904.7|transmembrane protein 17
mm10_v2_chr2_+_125136692_125136769	0.00713186	Rfx3_Rfx1_Rfx4	ENSMUST00000099452.2|Ctxn2|ENSMUSG00000074872.2|cortexin 2
mm10_v2_chr15_+_31276491_31276491	0.005331	Rfx3_Rfx1_Rfx4	ENSMUST00000068987.5|Fam136b-ps|ENSMUSG00000055416.5|family with sequence similarity 136, member B, pseudogene
mm10_v2_chr2_+_18998332_18998378	0.00483063	Rfx3_Rfx1_Rfx4	ENSMUST00000028069.1|4930426L09Rik|ENSMUSG00000026736.1|RIKEN cDNA 4930426L09 gene
mm10_v2_chr3_-_75451818_75451818	0.00481285	Rfx3_Rfx1_Rfx4	ENSMUST00000178270.1|Wdr49|ENSMUSG00000095162.1|WD repeat domain 49
mm10_v2_chr5_+_124725085_124725137	0.00440505	Rfx3_Rfx1_Rfx4	ENSMUST00000058440.8|Dnah10|ENSMUSG00000038011.9|dynein, axonemal, heavy chain 10
mm10_v2_chr19_+_43689672_43689695	0.00318269	Rfx3_Rfx1_Rfx4	ENSMUST00000081079.5|Entpd7|ENSMUSG00000025192.7|ectonucleoside triphosphate diphosphohydrolase 7
mm10_v2_chr11_-_103267405_103267472	0.00240497	Rfx3_Rfx1_Rfx4	ENSMUST00000021324.2|Map3k14|ENSMUSG00000020941.7|mitogen-activated protein kinase kinase kinase 14
mm10_v2_chr4_-_155086271_155086379	0.00182913	Rfx3_Rfx1_Rfx4	ENSMUST00000030914.3|Rer1|ENSMUSG00000029048.3|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)
mm10_v2_chr9_+_107563246_107563285	0.00161179	Rfx3_Rfx1_Rfx4	ENSMUST00000010198.3|Tusc2|ENSMUSG00000010054.3|tumor suppressor candidate 2
mm10_v2_chrX_+_74740927_74740927	0.00134572	Rfx3_Rfx1_Rfx4	ENSMUST00000114117.1|Gm6890|ENSMUSG00000079532.1|predicted gene 6890
mm10_v2_chr5_-_135778340_135778391	0.000703308	Rfx3_Rfx1_Rfx4	ENSMUST00000178796.1|Styxl1|ENSMUSG00000019178.11|serine/threonine/tyrosine interacting-like 1 	ENSMUST00000178515.1|Styxl1|ENSMUSG00000019178.11|serine/threonine/tyrosine interacting-like 1 	ENSMUST00000111164.2|Styxl1|ENSMUSG00000019178.11|serine/threonine/tyrosine interacting-like 1
mm10_v2_chr9_-_59036387_59036460	0.000343714	Rfx3_Rfx1_Rfx4	ENSMUST00000068664.5|Neo1|ENSMUSG00000032340.7|neogenin
mm10_v2_chr6_-_90428401_90428480	5.67906e-05	Rfx3_Rfx1_Rfx4	ENSMUST00000062750.5|Ccdc37|ENSMUSG00000048794.8|coiled-coil domain containing 37 	ENSMUST00000165673.1|Ccdc37|ENSMUSG00000048794.8|coiled-coil domain containing 37
