mm10_v2_chr1_+_181051232_181051242	8.07897	Pitx3	ENSMUST00000036819.6|9130409I23Rik|ENSMUSG00000038768.8|RIKEN cDNA 9130409I23 gene
mm10_v2_chr9_+_119357381_119357381	7.02184	Pitx3	ENSMUST00000039610.8|Xylb|ENSMUSG00000035769.8|xylulokinase homolog (H. influenzae)
mm10_v2_chr8_-_72212837_72212837	6.66698	Pitx3	ENSMUST00000098630.3|Cib3|ENSMUSG00000074240.3|calcium and integrin binding family member 3
mm10_v2_chr8_+_114133557_114133597	6.48282	Pitx3	ENSMUST00000073521.5|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000066514.6|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr17_-_12675833_12675844	6.35689	Pitx3	ENSMUST00000024596.8|Slc22a1|ENSMUSG00000023829.8|solute carrier family 22 (organic cation transporter), member 1
mm10_v2_chr8_+_114133601_114133630	6.26677	Pitx3	ENSMUST00000109109.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr15_+_9335550_9335623	6.20014	Pitx3	ENSMUST00000072403.6|Ugt3a2|ENSMUSG00000049152.11|UDP glycosyltransferases 3 family, polypeptide A2
mm10_v2_chr8_+_114133635_114133662	6.16934	Pitx3	ENSMUST00000147605.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7 	ENSMUST00000134593.1|Nudt7|ENSMUSG00000031767.7|nudix (nucleoside diphosphate linked moiety X)-type motif 7
mm10_v2_chr7_+_26835305_26835343	5.53682	Pitx3	ENSMUST00000005685.8|Cyp2a5|ENSMUSG00000005547.8|cytochrome P450, family 2, subfamily a, polypeptide 5
mm10_v2_chr10_+_88459569_88459670	5.51723	Pitx3	ENSMUST00000020252.3|Sycp3|ENSMUSG00000020059.3|synaptonemal complex protein 3 	ENSMUST00000125612.1|Sycp3|ENSMUSG00000020059.3|synaptonemal complex protein 3
mm10_v2_chr13_-_12464925_12464949	5.47207	Pitx3	ENSMUST00000124888.1|Lgals8|ENSMUSG00000057554.7|lectin, galactose binding, soluble 8
mm10_v2_chr12_-_104044431_104044447	5.22295	Pitx3	ENSMUST00000043915.3|Serpina12|ENSMUSG00000041567.3|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12
mm10_v2_chr2_-_24048857_24048868	5.06524	Pitx3	ENSMUST00000114497.1|Hnmt|ENSMUSG00000026986.8|histamine N-methyltransferase
mm10_v2_chr8_+_127447669_127447746	4.97175	Pitx3	ENSMUST00000159511.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr8_+_70083509_70083547	4.88376	Pitx3	ENSMUST00000007738.9|Hapln4|ENSMUSG00000007594.9|hyaluronan and proteoglycan link protein 4
mm10_v2_chr7_-_48843663_48843674	4.87753	Pitx3	ENSMUST00000167786.2|Csrp3|ENSMUSG00000030470.8|cysteine and glycine-rich protein 3
mm10_v2_chr7_-_100662414_100662440	4.71854	Pitx3	ENSMUST00000079176.6|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1
mm10_v2_chr7_-_100662315_100662365	4.61372	Pitx3	ENSMUST00000151123.1|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1 	ENSMUST00000107047.2|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1
mm10_v2_chr6_+_71493850_71493918	4.52407	Pitx3	ENSMUST00000064637.4|Rnf103|ENSMUSG00000052656.6|ring finger protein 103 	ENSMUST00000114178.1|Rnf103|ENSMUSG00000052656.6|ring finger protein 103
mm10_v2_chrX_+_59999436_59999495	4.44548	Pitx3	ENSMUST00000033477.4|F9|ENSMUSG00000031138.4|coagulation factor IX
mm10_v2_chrX_+_142226765_142226806	4.38003	Pitx3	ENSMUST00000112916.2|Nxt2|ENSMUSG00000042271.7|nuclear transport factor 2-like export factor 2
mm10_v2_chr8_-_27228581_27228587	4.2563	Pitx3	ENSMUST00000121838.1|Adrb3|ENSMUSG00000031489.8|adrenergic receptor, beta 3
mm10_v2_chr5_-_65428354_65428374	4.16808	Pitx3	ENSMUST00000131263.1|Ugdh|ENSMUSG00000029201.8|UDP-glucose dehydrogenase
mm10_v2_chr6_-_85933379_85933379	4.16514	Pitx3	ENSMUST00000162660.1|Nat8b|ENSMUSG00000089634.1|N-acetyltransferase 8B
mm10_v2_chr11_-_100770926_100770964	4.09602	Pitx3	ENSMUST00000139341.1|Ghdc|ENSMUSG00000017747.7|GH3 domain containing 	ENSMUST00000017891.7|Ghdc|ENSMUSG00000017747.7|GH3 domain containing
mm10_v2_chr7_-_19692596_19692658	4.03261	Pitx3	ENSMUST00000108451.2|Apoc1|ENSMUSG00000040564.7|apolipoprotein C-I 	ENSMUST00000045035.4|Apoc1|ENSMUSG00000040564.7|apolipoprotein C-I
mm10_v2_chr10_-_41709297_41709300	3.88996	Pitx3	ENSMUST00000019955.9|Ccdc162|ENSMUSG00000075225.5|coiled-coil domain containing 162 	ENSMUST00000099932.3|Ccdc162|ENSMUSG00000075225.5|coiled-coil domain containing 162
mm10_v2_chr14_+_66635251_66635349	3.76669	Pitx3	ENSMUST00000159365.1|Adra1a|ENSMUSG00000045875.6|adrenergic receptor, alpha 1a 	ENSMUST00000054661.1|Adra1a|ENSMUSG00000045875.6|adrenergic receptor, alpha 1a 	ENSMUST00000159068.1|Adra1a|ENSMUSG00000045875.6|adrenergic receptor, alpha 1a
mm10_v2_chr7_+_119900099_119900108	3.73805	Pitx3	ENSMUST00000106516.1|Lyrm1|ENSMUSG00000030922.5|LYR motif containing 1
mm10_v2_chr17_-_46763576_46763644	3.65711	Pitx3	ENSMUST00000041012.7|Ptcra|ENSMUSG00000036858.7|pre T cell antigen receptor alpha
mm10_v2_chr10_+_62920630_62920646	3.63623	Pitx3	ENSMUST00000044977.3|Slc25a16|ENSMUSG00000071253.2|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
mm10_v2_chr7_-_68275098_68275120	3.54695	Pitx3	ENSMUST00000135564.1|Gm16157|ENSMUSG00000086628.1|predicted gene 16157
mm10_v2_chr9_-_54068346_54068416	3.32419	Pitx3	ENSMUST00000098760.3|Tnfaip8l3|ENSMUSG00000074345.3|tumor necrosis factor, alpha-induced protein 8-like 3
mm10_v2_chr8_+_46010596_46010635	3.30571	Pitx3	ENSMUST00000110381.2|Lrp2bp|ENSMUSG00000031637.7|Lrp2 binding protein
mm10_v2_chrX_+_140381971_140381971	3.29431	Pitx3	ENSMUST00000044702.6|Frmpd3|ENSMUSG00000042425.11|FERM and PDZ domain containing 3
mm10_v2_chr7_+_27029074_27029090	3.20263	Pitx3	ENSMUST00000075552.5|Cyp2a12|ENSMUSG00000060407.5|cytochrome P450, family 2, subfamily a, polypeptide 12
mm10_v2_chr7_-_12998172_12998210	3.14496	Pitx3	ENSMUST00000120903.1|Slc27a5|ENSMUSG00000030382.8|solute carrier family 27 (fatty acid transporter), member 5
mm10_v2_chr9_-_15306116_15306167	3.01099	Pitx3	ENSMUST00000178977.1|4931406C07Rik|ENSMUSG00000031938.8|RIKEN cDNA 4931406C07 gene
mm10_v2_chr9_+_46269069_46269084	2.92833	Pitx3	ENSMUST00000034584.3|Apoa5|ENSMUSG00000032079.5|apolipoprotein A-V
mm10_v2_chr7_+_131410601_131410726	2.91179	Pitx3	ENSMUST00000015829.7|Acadsb|ENSMUSG00000030861.8|acyl-Coenzyme A dehydrogenase, short/branched chain 	ENSMUST00000117518.1|Acadsb|ENSMUSG00000030861.8|acyl-Coenzyme A dehydrogenase, short/branched chain
mm10_v2_chr7_-_12998140_12998171	2.89493	Pitx3	ENSMUST00000032539.7|Slc27a5|ENSMUSG00000030382.8|solute carrier family 27 (fatty acid transporter), member 5
mm10_v2_chr9_-_103305049_103305084	2.89373	Pitx3	ENSMUST00000142540.1|1300017J02Rik|ENSMUSG00000033688.3|RIKEN cDNA 1300017J02 gene
mm10_v2_chr7_+_26307190_26307197	2.86917	Pitx3	ENSMUST00000098657.3|Cyp2a4|ENSMUSG00000074254.3|cytochrome P450, family 2, subfamily a, polypeptide 4
mm10_v2_chr6_+_90550789_90550849	2.81254	Pitx3	ENSMUST00000130418.1|Aldh1l1|ENSMUSG00000030088.9|aldehyde dehydrogenase 1 family, member L1 	ENSMUST00000032175.8|Aldh1l1|ENSMUSG00000030088.9|aldehyde dehydrogenase 1 family, member L1
mm10_v2_chr8_-_3467617_3467680	2.77867	Pitx3	ENSMUST00000111081.3|Pex11g|ENSMUSG00000069633.6|peroxisomal biogenesis factor 11 gamma 	ENSMUST00000118194.1|Pex11g|ENSMUSG00000069633.6|peroxisomal biogenesis factor 11 gamma 	ENSMUST00000004686.6|Pex11g|ENSMUSG00000069633.6|peroxisomal biogenesis factor 11 gamma
mm10_v2_chrX_+_7909542_7909542	2.75577	Pitx3	ENSMUST00000086274.2|Gm10490|ENSMUSG00000073290.1|predicted gene 10490
mm10_v2_chr7_+_102225812_102225823	2.72715	Pitx3	ENSMUST00000142873.1|Pgap2|ENSMUSG00000030990.11|post-GPI attachment to proteins 2
mm10_v2_chr19_+_7494033_7494068	2.72419	Pitx3	ENSMUST00000170373.1|Atl3|ENSMUSG00000024759.7|atlastin GTPase 3
mm10_v2_chr12_+_36090379_36090379	2.72073	Pitx3	ENSMUST00000071825.5|Gm5434|ENSMUSG00000059301.5|predicted gene 5434
mm10_v2_chr11_+_9048575_9048630	2.69316	Pitx3	ENSMUST00000043285.4|Gm11992|ENSMUSG00000040978.4|predicted gene 11992
mm10_v2_chr8_-_72435043_72435156	2.65788	Pitx3	ENSMUST00000109974.1|Calr3|ENSMUSG00000019732.8|calreticulin 3
mm10_v2_chr14_-_25927672_25927672	2.64439	Pitx3	ENSMUST00000185006.1|Tmem254a|ENSMUSG00000072676.5|transmembrane protein 254a
mm10_v2_chr1_+_88070765_88070800	2.51629	Pitx3	ENSMUST00000073772.4|Ugt1a9|ENSMUSG00000090175.1|UDP glucuronosyltransferase 1 family, polypeptide A9
mm10_v2_chr11_-_120727226_120727292	2.42207	Pitx3	ENSMUST00000106148.3|Dcxr|ENSMUSG00000039450.5|dicarbonyl L-xylulose reductase 	ENSMUST00000026144.4|Dcxr|ENSMUSG00000039450.5|dicarbonyl L-xylulose reductase
mm10_v2_chr11_+_102041509_102041531	2.41353	Pitx3	ENSMUST00000123895.1|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G 	ENSMUST00000017453.5|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G 	ENSMUST00000107163.2|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G 	ENSMUST00000107164.2|Cd300lg|ENSMUSG00000017309.5|CD300 antigen like family member G
mm10_v2_chr1_+_167308649_167308670	2.39041	Pitx3	ENSMUST00000097473.4|Tmco1|ENSMUSG00000052428.5|transmembrane and coiled-coil domains 1
mm10_v2_chr5_+_120513102_120513143	2.38353	Pitx3	ENSMUST00000111889.1|Slc8b1|ENSMUSG00000032754.8|solute carrier family 8 (sodium/lithium/calcium exchanger), member B1
mm10_v2_chr6_-_72617000_72617000	2.36143	Pitx3	ENSMUST00000070524.4|Tgoln1|ENSMUSG00000056429.4|trans-golgi network protein
mm10_v2_chr18_+_51117754_51117898	2.33002	Pitx3	ENSMUST00000116639.2|Prr16|ENSMUSG00000073565.4|proline rich 16
mm10_v2_chr10_+_62920648_62920682	2.31195	Pitx3	ENSMUST00000144459.1|Slc25a16|ENSMUSG00000071253.2|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
mm10_v2_chr9_+_77941274_77941303	2.3028	Pitx3	ENSMUST00000134072.1|Elovl5|ENSMUSG00000032349.7|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm10_v2_chr4_-_109202217_109202272	2.28331	Pitx3	ENSMUST00000160774.1|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9 	ENSMUST00000030288.7|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9 	ENSMUST00000162787.2|Osbpl9|ENSMUSG00000028559.11|oxysterol binding protein-like 9
mm10_v2_chr4_+_155582476_155582495	2.27553	Pitx3	ENSMUST00000105612.1|Nadk|ENSMUSG00000029063.10|NAD kinase
mm10_v2_chr6_-_128526703_128526720	2.26301	Pitx3	ENSMUST00000143664.1|Pzp|ENSMUSG00000030359.8|pregnancy zone protein 	ENSMUST00000112132.1|Pzp|ENSMUSG00000030359.8|pregnancy zone protein 	ENSMUST00000032510.7|Pzp|ENSMUSG00000030359.8|pregnancy zone protein
mm10_v2_chr1_-_184883218_184883218	2.24535	Pitx3	ENSMUST00000048308.5|C130074G19Rik|ENSMUSG00000039349.5|RIKEN cDNA C130074G19 gene
mm10_v2_chr16_-_91618986_91619026	2.23925	Pitx3	ENSMUST00000143058.1|Dnajc28|ENSMUSG00000039763.9|DnaJ (Hsp40) homolog, subfamily C, member 28 	ENSMUST00000049244.8|Dnajc28|ENSMUSG00000039763.9|DnaJ (Hsp40) homolog, subfamily C, member 28 	ENSMUST00000169982.1|Dnajc28|ENSMUSG00000039763.9|DnaJ (Hsp40) homolog, subfamily C, member 28 	ENSMUST00000133731.1|Dnajc28|ENSMUSG00000039763.9|DnaJ (Hsp40) homolog, subfamily C, member 28
mm10_v2_chr9_+_114731177_114731234	2.22386	Pitx3	ENSMUST00000035007.8|Cmtm6|ENSMUSG00000032434.8|CKLF-like MARVEL transmembrane domain containing 6
mm10_v2_chr6_+_149582012_149582012	2.16394	Pitx3	ENSMUST00000144085.2|Gm21814|ENSMUSG00000096299.1|predicted gene, 21814
mm10_v2_chr3_+_95318782_95318793	2.14556	Pitx3	ENSMUST00000139866.1|Cers2|ENSMUSG00000015714.5|ceramide synthase 2
mm10_v2_chr7_-_126922887_126922926	2.13097	Pitx3	ENSMUST00000134134.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000119781.1|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219 	ENSMUST00000121612.2|Tmem219|ENSMUSG00000060538.8|transmembrane protein 219
mm10_v2_chr15_+_99392882_99392903	2.12324	Pitx3	ENSMUST00000023749.8|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr9_-_73039697_73039725	2.11185	Pitx3	ENSMUST00000184035.1|Pigb|ENSMUSG00000079469.4|phosphatidylinositol glycan anchor biosynthesis, class B 	ENSMUST00000098566.4|Pigb|ENSMUSG00000079469.4|phosphatidylinositol glycan anchor biosynthesis, class B
mm10_v2_chr1_-_175979114_175979114	2.1114	Pitx3	ENSMUST00000104983.1|B020018G12Rik|ENSMUSG00000078184.1|RIKEN cDNA B020018G12 gene
mm10_v2_chr11_-_79296906_79296906	2.10517	Pitx3	ENSMUST00000068448.2|Gm9964|ENSMUSG00000055072.2|predicted gene 9964
mm10_v2_chr2_-_32704123_32704139	2.10413	Pitx3	ENSMUST00000127812.1|Fpgs|ENSMUSG00000009566.6|folylpolyglutamyl synthetase
mm10_v2_chr11_+_67025144_67025179	2.1029	Pitx3	ENSMUST00000079077.5|Tmem220|ENSMUSG00000050270.6|transmembrane protein 220 	ENSMUST00000061786.5|Tmem220|ENSMUSG00000050270.6|transmembrane protein 220
mm10_v2_chr10_+_58497918_58497970	2.07184	Pitx3	ENSMUST00000036576.8|Ccdc138|ENSMUSG00000038010.8|coiled-coil domain containing 138
mm10_v2_chr4_-_19922599_19922614	2.06776	Pitx3	ENSMUST00000029900.5|Atp6v0d2|ENSMUSG00000028238.6|ATPase, H+ transporting, lysosomal V0 subunit D2
mm10_v2_chr14_-_26207041_26207041	2.04634	Pitx3	ENSMUST00000022418.8|Tmem254b|ENSMUSG00000021867.10|transmembrane protein 254b
mm10_v2_chr14_+_26082245_26082297	2.04578	Pitx3	ENSMUST00000168149.2|Cphx2|ENSMUSG00000098463.1|cytoplasmic polyadenylated homeobox 2 	ENSMUST00000163305.1|Cphx3|ENSMUSG00000094817.2|cytoplasmic polyadenylated homeobox 3
mm10_v2_chr9_-_73039644_73039674	2.02303	Pitx3	ENSMUST00000184389.1|Pigb|ENSMUSG00000079469.4|phosphatidylinositol glycan anchor biosynthesis, class B
mm10_v2_chrX_-_162888426_162888473	1.99472	Pitx3	ENSMUST00000033723.3|Syap1|ENSMUSG00000031357.3|synapse associated protein 1
mm10_v2_chr9_-_64341145_64341257	1.9633	Pitx3	ENSMUST00000120760.1|Dis3l|ENSMUSG00000032396.11|DIS3 mitotic control homolog (S. cerevisiae)-like 	ENSMUST00000168844.2|Dis3l|ENSMUSG00000032396.11|DIS3 mitotic control homolog (S. cerevisiae)-like
mm10_v2_chr7_+_68275970_68276025	1.93753	Pitx3	ENSMUST00000153805.1|Fam169b|ENSMUSG00000074071.3|family with sequence similarity 169, member B
mm10_v2_chr14_+_26221856_26221856	1.89692	Pitx3	ENSMUST00000184577.1|Cphx3|ENSMUSG00000094817.2|cytoplasmic polyadenylated homeobox 3
mm10_v2_chr14_+_25942492_25942492	1.89589	Pitx3	ENSMUST00000184016.1|Cphx1|ENSMUSG00000095975.2|cytoplasmic polyadenylated homeobox 1
mm10_v2_chr11_-_106580594_106580609	1.88422	Pitx3	ENSMUST00000153870.1|Tex2|ENSMUSG00000040548.9|testis expressed gene 2
mm10_v2_chr1_+_128244122_128244181	1.87528	Pitx3	ENSMUST00000027592.3|Ubxn4|ENSMUSG00000026353.3|UBX domain protein 4
mm10_v2_chr2_+_163122605_163122620	1.87008	Pitx3	ENSMUST00000144092.1|Gm11454|ENSMUSG00000086152.1|predicted gene 11454
mm10_v2_chr19_+_43782181_43782193	1.84572	Pitx3	ENSMUST00000026208.4|Abcc2|ENSMUSG00000025194.4|ATP-binding cassette, sub-family C (CFTR/MRP), member 2
mm10_v2_chr7_+_25619404_25619493	1.84033	Pitx3	ENSMUST00000077338.5|Atp5sl|ENSMUSG00000057229.5|ATP5S-like 	ENSMUST00000085953.3|Atp5sl|ENSMUSG00000057229.5|ATP5S-like
mm10_v2_chr6_+_56017489_56017517	1.8395	Pitx3	ENSMUST00000052827.4|Ppp1r17|ENSMUSG00000002930.5|protein phosphatase 1, regulatory subunit 17
mm10_v2_chr17_-_32189457_32189549	1.82485	Pitx3	ENSMUST00000087721.3|Ephx3|ENSMUSG00000037577.6|epoxide hydrolase 3 	ENSMUST00000162117.1|Ephx3|ENSMUSG00000037577.6|epoxide hydrolase 3
mm10_v2_chr2_-_132578244_132578255	1.82164	Pitx3	ENSMUST00000110142.1|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
mm10_v2_chr5_+_92376954_92376975	1.81543	Pitx3	ENSMUST00000120781.1|Art3|ENSMUSG00000034842.10|ADP-ribosyltransferase 3
mm10_v2_chr10_-_68278713_68278735	1.81202	Pitx3	ENSMUST00000020106.7|Arid5b|ENSMUSG00000019947.9|AT rich interactive domain 5B (MRF1-like)
mm10_v2_chr4_+_141368116_141368220	1.79411	Pitx3	ENSMUST00000006380.4|Fam131c|ENSMUSG00000006218.4|family with sequence similarity 131, member C
mm10_v2_chr9_-_64341288_64341311	1.77003	Pitx3	ENSMUST00000068367.7|Dis3l|ENSMUSG00000032396.11|DIS3 mitotic control homolog (S. cerevisiae)-like
mm10_v2_chr13_-_74482943_74482943	1.74381	Pitx3	ENSMUST00000074369.6|Zfp825|ENSMUSG00000069208.5|zinc finger protein 825
mm10_v2_chr9_-_20815048_20815069	1.73357	Pitx3	ENSMUST00000004201.7|Col5a3|ENSMUSG00000004098.7|collagen, type V, alpha 3
mm10_v2_chr10_-_20548361_20548470	1.71297	Pitx3	ENSMUST00000164195.1|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr7_-_7299492_7299540	1.71043	Pitx3	ENSMUST00000000619.6|Clcn4-2|ENSMUSG00000000605.8|chloride channel 4-2
mm10_v2_chr10_+_80702649_80702761	1.70926	Pitx3	ENSMUST00000095426.3|Izumo4|ENSMUSG00000055862.6|IZUMO family member 4
mm10_v2_chr10_+_128499364_128499445	1.6926	Pitx3	ENSMUST00000180477.1|A430046D13Rik|ENSMUSG00000097353.1|Riken cDNA A430046D13 gene
mm10_v2_chr1_-_59161594_59161636	1.66137	Pitx3	ENSMUST00000078874.7|Mpp4|ENSMUSG00000079550.3|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) 	ENSMUST00000066374.7|Mpp4|ENSMUSG00000079550.3|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
mm10_v2_chr1_-_134361933_134361999	1.64558	Pitx3	ENSMUST00000049470.4|Tmem183a|ENSMUSG00000042305.6|transmembrane protein 183A
mm10_v2_chr13_+_67779754_67779754	1.64293	Pitx3	ENSMUST00000164936.2|Zfp493|ENSMUSG00000090659.2|zinc finger protein 493 	ENSMUST00000181319.1|Zfp493|ENSMUSG00000090659.2|zinc finger protein 493
mm10_v2_chr19_-_37330613_37330613	1.6405	Pitx3	ENSMUST00000131070.1|Ide|ENSMUSG00000056999.8|insulin degrading enzyme
mm10_v2_chr2_+_144594054_144594083	1.63423	Pitx3	ENSMUST00000136628.1|Gm561|ENSMUSG00000074754.4|predicted gene 561
mm10_v2_chr10_-_12861735_12861735	1.6329	Pitx3	ENSMUST00000076817.4|Utrn|ENSMUSG00000019820.9|utrophin
mm10_v2_chr10_-_20548320_20548333	1.62556	Pitx3	ENSMUST00000169404.1|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr17_-_32420965_32420986	1.62262	Pitx3	ENSMUST00000170392.1|Pglyrp2|ENSMUSG00000079563.3|peptidoglycan recognition protein 2
mm10_v2_chr5_+_30853796_30853801	1.60867	Pitx3	ENSMUST00000126284.1|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
mm10_v2_chrX_-_166479633_166479707	1.60054	Pitx3	ENSMUST00000049435.8|Rab9|ENSMUSG00000079316.4|RAB9, member RAS oncogene family
mm10_v2_chr4_+_41755210_41755267	1.59681	Pitx3	ENSMUST00000108038.1|Galt|ENSMUSG00000036073.11|galactose-1-phosphate uridyl transferase 	ENSMUST00000084695.4|Galt|ENSMUSG00000036073.11|galactose-1-phosphate uridyl transferase
mm10_v2_chr8_+_105708270_105708302	1.59556	Pitx3	ENSMUST00000013302.5|4933405L10Rik|ENSMUSG00000013158.5|RIKEN cDNA 4933405L10 gene
mm10_v2_chr11_-_120617887_120617941	1.58827	Pitx3	ENSMUST00000106188.3|Pcyt2|ENSMUSG00000025137.9|phosphate cytidylyltransferase 2, ethanolamine 	ENSMUST00000026129.9|Pcyt2|ENSMUSG00000025137.9|phosphate cytidylyltransferase 2, ethanolamine
mm10_v2_chr10_-_77089428_77089477	1.58794	Pitx3	ENSMUST00000156009.1|Col18a1|ENSMUSG00000001435.8|collagen, type XVIII, alpha 1
mm10_v2_chr7_+_97720839_97720839	1.57632	Pitx3	ENSMUST00000070021.1|Gm9990|ENSMUSG00000056106.1|predicted gene 9990
mm10_v2_chr6_-_85762480_85762480	1.5724	Pitx3	ENSMUST00000168531.1|Cml3|ENSMUSG00000051262.8|camello-like 3
mm10_v2_chr8_-_105758570_105758664	1.56468	Pitx3	ENSMUST00000155038.2|Gfod2|ENSMUSG00000013150.9|glucose-fructose oxidoreductase domain containing 2 	ENSMUST00000013294.9|Gfod2|ENSMUSG00000013150.9|glucose-fructose oxidoreductase domain containing 2
mm10_v2_chr4_-_133529326_133529326	1.56145	Pitx3	ENSMUST00000163919.1|Gm17688|ENSMUSG00000090282.1|predicted gene, 17688
mm10_v2_chr1_+_185332143_185332216	1.55265	Pitx3	ENSMUST00000027916.6|Bpnt1|ENSMUSG00000026617.9|bisphosphate 3'-nucleotidase 1 	ENSMUST00000151769.1|Bpnt1|ENSMUSG00000026617.9|bisphosphate 3'-nucleotidase 1 	ENSMUST00000110965.1|Bpnt1|ENSMUSG00000026617.9|bisphosphate 3'-nucleotidase 1
mm10_v2_chr8_+_36489191_36489191	1.55167	Pitx3	ENSMUST00000171777.1|6430573F11Rik|ENSMUSG00000039620.10|RIKEN cDNA 6430573F11 gene
mm10_v2_chr15_+_31572179_31572197	1.54915	Pitx3	ENSMUST00000161088.1|Cmbl|ENSMUSG00000022235.8|carboxymethylenebutenolidase-like (Pseudomonas)
mm10_v2_chr3_-_88455735_88455788	1.5443	Pitx3	ENSMUST00000029700.5|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr9_+_90054529_90054545	1.54311	Pitx3	ENSMUST00000143172.1|Ctsh|ENSMUSG00000032359.8|cathepsin H
mm10_v2_chrX_-_36874111_36874111	1.54037	Pitx3	ENSMUST00000047486.5|C330007P06Rik|ENSMUSG00000006423.9|RIKEN cDNA C330007P06 gene
mm10_v2_chr11_-_40695203_40695223	1.52839	Pitx3	ENSMUST00000101347.3|Mat2b|ENSMUSG00000042032.7|methionine adenosyltransferase II, beta
mm10_v2_chr4_-_44066960_44067061	1.5132	Pitx3	ENSMUST00000173234.1|Gne|ENSMUSG00000028479.12|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase 	ENSMUST00000173274.1|Gne|ENSMUSG00000028479.12|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
mm10_v2_chr18_-_3309858_3309916	1.51024	Pitx3	ENSMUST00000144496.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000154715.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator
mm10_v2_chr11_-_98775333_98775354	1.5094	Pitx3	ENSMUST00000064941.6|Nr1d1|ENSMUSG00000020889.11|nuclear receptor subfamily 1, group D, member 1
mm10_v2_chr11_-_121388186_121388267	1.50008	Pitx3	ENSMUST00000106107.2|Rab40b|ENSMUSG00000025170.7|Rab40b, member RAS oncogene family
mm10_v2_chr2_-_132578155_132578233	1.49778	Pitx3	ENSMUST00000110136.1|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 	ENSMUST00000124107.1|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 	ENSMUST00000060955.5|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
mm10_v2_chr1_-_39651165_39651196	1.49539	Pitx3	ENSMUST00000053355.4|Creg2|ENSMUSG00000050967.4|cellular repressor of E1A-stimulated genes 2
mm10_v2_chr17_-_35121990_35122053	1.47333	Pitx3	ENSMUST00000173915.1|Csnk2b|ENSMUSG00000024387.7|casein kinase 2, beta polypeptide 	ENSMUST00000172765.2|Csnk2b|ENSMUSG00000024387.7|casein kinase 2, beta polypeptide
mm10_v2_chr11_-_60811228_60811265	1.46536	Pitx3	ENSMUST00000018744.8|Shmt1|ENSMUSG00000020534.8|serine hydroxymethyltransferase 1 (soluble)
mm10_v2_chr11_-_4160286_4160305	1.45782	Pitx3	ENSMUST00000093381.4|Ccdc157|ENSMUSG00000051427.8|coiled-coil domain containing 157 	ENSMUST00000101626.2|Ccdc157|ENSMUSG00000051427.8|coiled-coil domain containing 157
mm10_v2_chr3_-_153912966_153912990	1.44762	Pitx3	ENSMUST00000089950.4|Rabggtb|ENSMUSG00000038975.8|RAB geranylgeranyl transferase, b subunit
mm10_v2_chr11_-_73324616_73324641	1.44248	Pitx3	ENSMUST00000021119.2|Aspa|ENSMUSG00000020774.3|aspartoacylase
mm10_v2_chr11_-_116131073_116131126	1.43975	Pitx3	ENSMUST00000106440.2|Trim65|ENSMUSG00000054517.3|tripartite motif-containing 65 	ENSMUST00000067632.3|Trim65|ENSMUSG00000054517.3|tripartite motif-containing 65
mm10_v2_chr18_-_3309723_3309789	1.43739	Pitx3	ENSMUST00000136961.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000152108.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator
mm10_v2_chr1_-_36244245_36244320	1.43401	Pitx3	ENSMUST00000046875.7|Uggt1|ENSMUSG00000037470.8|UDP-glucose glycoprotein glucosyltransferase 1
mm10_v2_chr10_+_80151154_80151375	1.42972	Pitx3	ENSMUST00000146516.1|Midn|ENSMUSG00000035621.7|midnolin 	ENSMUST00000144526.1|Midn|ENSMUSG00000035621.7|midnolin
mm10_v2_chr8_+_70131327_70131392	1.42698	Pitx3	ENSMUST00000095273.5|Nr2c2ap|ENSMUSG00000071078.5|nuclear receptor 2C2-associated protein
mm10_v2_chr5_+_107830244_107830259	1.42576	Pitx3	ENSMUST00000072578.6|Ube2d2b|ENSMUSG00000063447.6|ubiquitin-conjugating enzyme E2D 2B
mm10_v2_chr11_-_96916448_96916531	1.41407	Pitx3	ENSMUST00000103152.4|Cdk5rap3|ENSMUSG00000018669.8|CDK5 regulatory subunit associated protein 3
mm10_v2_chr7_+_30169861_30169912	1.41339	Pitx3	ENSMUST00000085668.4|Gm5113|ENSMUSG00000066647.5|predicted gene 5113
mm10_v2_chr5_-_134456702_134456785	1.40593	Pitx3	ENSMUST00000073161.5|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1 	ENSMUST00000171794.2|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1 	ENSMUST00000111245.2|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1 	ENSMUST00000100654.3|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1 	ENSMUST00000167084.2|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1 	ENSMUST00000100652.3|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1 	ENSMUST00000100650.3|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1 	ENSMUST00000074114.5|Gtf2ird1|ENSMUSG00000023079.8|general transcription factor II I repeat domain-containing 1
mm10_v2_chrY_+_818646_818713	1.40486	Pitx3	ENSMUST00000115894.1|Uba1y|ENSMUSG00000069053.5|ubiquitin-activating enzyme, Chr Y
mm10_v2_chr5_+_106609098_106609098	1.40222	Pitx3	ENSMUST00000167618.1|Gm17304|ENSMUSG00000091096.1|predicted gene, 17304
mm10_v2_chr7_-_141475131_141475168	1.39746	Pitx3	ENSMUST00000043870.8|Polr2l|ENSMUSG00000038489.8|polymerase (RNA) II (DNA directed) polypeptide L
mm10_v2_chr7_-_118584669_118584741	1.38534	Pitx3	ENSMUST00000044195.4|Tmc7|ENSMUSG00000042246.4|transmembrane channel-like gene family 7
mm10_v2_chr4_-_12087912_12088011	1.37688	Pitx3	ENSMUST00000050686.3|Tmem67|ENSMUSG00000049488.8|transmembrane protein 67
mm10_v2_chr9_-_108567336_108567359	1.37364	Pitx3	ENSMUST00000074208.4|Ndufaf3|ENSMUSG00000070283.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3
mm10_v2_chr19_-_29648355_29648425	1.34567	Pitx3	ENSMUST00000159692.1|Ermp1|ENSMUSG00000046324.6|endoplasmic reticulum metallopeptidase 1
mm10_v2_chr14_-_20702991_20703034	1.34301	Pitx3	ENSMUST00000180987.1|6230400D17Rik|ENSMUSG00000097577.1|RIKEN cDNA 6230400D17 gene
mm10_v2_chr1_-_59237093_59237256	1.34079	Pitx3	ENSMUST00000163058.1|Als2|ENSMUSG00000026024.8|amyotrophic lateral sclerosis 2 (juvenile) 	ENSMUST00000027178.6|Als2|ENSMUSG00000026024.8|amyotrophic lateral sclerosis 2 (juvenile)
mm10_v2_chr6_-_83656082_83656187	1.33482	Pitx3	ENSMUST00000014686.2|Clec4f|ENSMUSG00000014542.2|C-type lectin domain family 4, member f
mm10_v2_chrX_+_36874351_36874368	1.32333	Pitx3	ENSMUST00000016452.7|Ube2a|ENSMUSG00000016308.9|ubiquitin-conjugating enzyme E2A
mm10_v2_chr13_-_41220395_41220412	1.32087	Pitx3	ENSMUST00000021793.7|Elovl2|ENSMUSG00000021364.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
mm10_v2_chr1_-_90967667_90967667	1.31612	Pitx3	ENSMUST00000131428.1|Rab17|ENSMUSG00000026304.7|RAB17, member RAS oncogene family
mm10_v2_chr14_+_79397772_79397772	1.30617	Pitx3	ENSMUST00000022600.2|Mtrf1|ENSMUSG00000022022.2|mitochondrial translational release factor 1
mm10_v2_chr8_-_71511762_71511778	1.30563	Pitx3	ENSMUST00000048452.4|Plvap|ENSMUSG00000034845.5|plasmalemma vesicle associated protein
mm10_v2_chr7_+_24257644_24257644	1.30299	Pitx3	ENSMUST00000072713.6|Zfp108|ENSMUSG00000030486.8|zinc finger protein 108
mm10_v2_chr4_-_142015056_142015069	1.30178	Pitx3	ENSMUST00000105780.1|Fhad1|ENSMUSG00000051435.5|forkhead-associated (FHA) phosphopeptide binding domain 1
mm10_v2_chr11_+_51261719_51261731	1.29598	Pitx3	ENSMUST00000130641.1|Clk4|ENSMUSG00000020385.10|CDC like kinase 4
mm10_v2_chr8_+_33653238_33653238	1.28895	Pitx3	ENSMUST00000033992.8|Gsr|ENSMUSG00000031584.10|glutathione reductase
mm10_v2_chr11_-_78080360_78080387	1.2795	Pitx3	ENSMUST00000021183.3|Eral1|ENSMUSG00000020832.8|Era (G-protein)-like 1 (E. coli)
mm10_v2_chr7_+_6252710_6252755	1.27299	Pitx3	ENSMUST00000121024.1|Gm6792|ENSMUSG00000053367.9|predicted gene 6792
mm10_v2_chr7_+_19489045_19489067	1.2729	Pitx3	ENSMUST00000011407.7|Exoc3l2|ENSMUSG00000011263.9|exocyst complex component 3-like 2 	ENSMUST00000137613.1|Exoc3l2|ENSMUSG00000011263.9|exocyst complex component 3-like 2
mm10_v2_chr2_+_69670100_69670134	1.27191	Pitx3	ENSMUST00000100050.3|Klhl41|ENSMUSG00000075307.3|kelch-like 41
mm10_v2_chr5_-_121618865_121618938	1.27094	Pitx3	ENSMUST00000041252.6|Acad12|ENSMUSG00000042647.7|acyl-Coenzyme A dehydrogenase family, member 12 	ENSMUST00000111776.1|Acad12|ENSMUSG00000042647.7|acyl-Coenzyme A dehydrogenase family, member 12
mm10_v2_chr5_+_117976761_117976803	1.26949	Pitx3	ENSMUST00000035579.6|Fbxo21|ENSMUSG00000032898.6|F-box protein 21
mm10_v2_chr10_-_43540945_43541024	1.26303	Pitx3	ENSMUST00000147196.1|1700021F05Rik|ENSMUSG00000019797.4|RIKEN cDNA 1700021F05 gene 	ENSMUST00000019932.3|1700021F05Rik|ENSMUSG00000019797.4|RIKEN cDNA 1700021F05 gene
mm10_v2_chr2_+_140152043_140152043	1.26152	Pitx3	ENSMUST00000104994.2|Gm17374|ENSMUSG00000078197.2|predicted gene, 17374
mm10_v2_chr10_+_39612934_39612934	1.25879	Pitx3	ENSMUST00000019987.6|Traf3ip2|ENSMUSG00000019842.6|TRAF3 interacting protein 2
mm10_v2_chr11_+_22971991_22972070	1.2575	Pitx3	ENSMUST00000049506.5|Zrsr1|ENSMUSG00000044068.5|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1
mm10_v2_chr8_+_71951038_71951130	1.25316	Pitx3	ENSMUST00000131237.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000136516.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000109997.2|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961 	ENSMUST00000132848.1|Zfp961|ENSMUSG00000052446.10|zinc finger protein 961
mm10_v2_chr17_+_46711459_46711497	1.24872	Pitx3	ENSMUST00000002840.8|Pex6|ENSMUSG00000002763.10|peroxisomal biogenesis factor 6
mm10_v2_chr9_-_62070606_62070606	1.24379	Pitx3	ENSMUST00000034785.7|Glce|ENSMUSG00000032252.8|glucuronyl C5-epimerase
mm10_v2_chr3_-_88455692_88455707	1.24329	Pitx3	ENSMUST00000107531.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr2_-_25236787_25236787	1.23602	Pitx3	ENSMUST00000091318.4|Gm757|ENSMUSG00000089953.2|predicted gene 757
mm10_v2_chr11_-_29247208_29247409	1.22973	Pitx3	ENSMUST00000020754.3|Ccdc104|ENSMUSG00000020462.8|coiled-coil domain containing 104
mm10_v2_chr8_-_72213636_72213636	1.22785	Pitx3	ENSMUST00000109987.1|Gm11034|ENSMUSG00000079016.1|predicted gene 11034
mm10_v2_chr2_-_121380940_121380947	1.21635	Pitx3	ENSMUST00000038389.8|Strc|ENSMUSG00000033498.8|stereocilin
mm10_v2_chr11_+_101448403_101448487	1.21326	Pitx3	ENSMUST00000010502.6|Ifi35|ENSMUSG00000010358.7|interferon-induced protein 35
mm10_v2_chr15_+_76701455_76701542	1.2101	Pitx3	ENSMUST00000019224.7|Mfsd3|ENSMUSG00000019080.7|major facilitator superfamily domain containing 3
mm10_v2_chr10_+_61417972_61417972	1.20167	Pitx3	ENSMUST00000049339.6|Nodal|ENSMUSG00000037171.6|nodal
mm10_v2_chr8_+_47824459_47824482	1.19578	Pitx3	ENSMUST00000038693.6|Cldn22|ENSMUSG00000038064.6|claudin 22
mm10_v2_chr9_+_22454290_22454290	1.19252	Pitx3	ENSMUST00000168332.1|Gm17545|ENSMUSG00000091159.1|predicted gene, 17545
mm10_v2_chr6_+_114643106_114643169	1.19011	Pitx3	ENSMUST00000169310.3|Atg7|ENSMUSG00000030314.10|autophagy related 7 	ENSMUST00000182169.1|Atg7|ENSMUSG00000030314.10|autophagy related 7 	ENSMUST00000183165.1|Atg7|ENSMUSG00000030314.10|autophagy related 7 	ENSMUST00000182098.1|Atg7|ENSMUSG00000030314.10|autophagy related 7 	ENSMUST00000182793.1|Atg7|ENSMUSG00000030314.10|autophagy related 7 	ENSMUST00000182902.1|Atg7|ENSMUSG00000030314.10|autophagy related 7 	ENSMUST00000182428.1|Atg7|ENSMUSG00000030314.10|autophagy related 7 	ENSMUST00000182035.1|Atg7|ENSMUSG00000030314.10|autophagy related 7
mm10_v2_chr7_-_144738520_144738597	1.18631	Pitx3	ENSMUST00000118556.2|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel 	ENSMUST00000033393.8|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel
mm10_v2_chr2_-_132578128_132578153	1.18601	Pitx3	ENSMUST00000028822.7|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
mm10_v2_chr2_+_158502633_158502698	1.18599	Pitx3	ENSMUST00000109484.1|Adig|ENSMUSG00000044405.4|adipogenin
mm10_v2_chr1_+_171225054_171225100	1.1847	Pitx3	ENSMUST00000111321.1|Apoa2|ENSMUSG00000005681.6|apolipoprotein A-II 	ENSMUST00000005824.5|Apoa2|ENSMUSG00000005681.6|apolipoprotein A-II 	ENSMUST00000111320.1|Apoa2|ENSMUSG00000005681.6|apolipoprotein A-II 	ENSMUST00000111319.1|Apoa2|ENSMUSG00000005681.6|apolipoprotein A-II
mm10_v2_chr11_+_97029925_97029997	1.18247	Pitx3	ENSMUST00000021249.4|Scrn2|ENSMUSG00000020877.5|secernin 2
mm10_v2_chr1_-_5070281_5070288	1.17497	Pitx3	ENSMUST00000147158.1|Rgs20|ENSMUSG00000002459.11|regulator of G-protein signaling 20 	ENSMUST00000118000.1|Rgs20|ENSMUSG00000002459.11|regulator of G-protein signaling 20
mm10_v2_chr17_+_94873986_94873986	1.17474	Pitx3	ENSMUST00000108007.4|Gm20939|ENSMUSG00000095193.1|predicted gene, 20939
mm10_v2_chr3_-_88334428_88334466	1.17255	Pitx3	ENSMUST00000107552.1|Tmem79|ENSMUSG00000001420.7|transmembrane protein 79
mm10_v2_chr6_-_86733268_86733394	1.16662	Pitx3	ENSMUST00000001185.7|Gmcl1|ENSMUSG00000001157.7|germ cell-less homolog 1 (Drosophila)
mm10_v2_chrX_-_36645359_36645414	1.15607	Pitx3	ENSMUST00000051906.6|Akap17b|ENSMUSG00000059708.6|A kinase (PRKA) anchor protein 17B
mm10_v2_chr17_+_49428359_49428445	1.15114	Pitx3	ENSMUST00000165390.2|Mocs1|ENSMUSG00000064120.7|molybdenum cofactor synthesis 1 	ENSMUST00000024797.9|Mocs1|ENSMUSG00000064120.7|molybdenum cofactor synthesis 1 	ENSMUST00000173033.1|Mocs1|ENSMUSG00000064120.7|molybdenum cofactor synthesis 1
mm10_v2_chr15_-_76660108_76660142	1.15112	Pitx3	ENSMUST00000066677.8|Cyhr1|ENSMUSG00000053929.10|cysteine and histidine rich 1 	ENSMUST00000177359.1|Cyhr1|ENSMUSG00000053929.10|cysteine and histidine rich 1
mm10_v2_chr4_+_80910646_80910685	1.13879	Pitx3	ENSMUST00000055922.3|Lurap1l|ENSMUSG00000048706.3|leucine rich adaptor protein 1-like
mm10_v2_chr14_-_8309770_8309795	1.13661	Pitx3	ENSMUST00000121887.1|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A 	ENSMUST00000036070.8|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A 	ENSMUST00000137133.1|Fam107a|ENSMUSG00000021750.9|family with sequence similarity 107, member A
mm10_v2_chr5_+_34525797_34525869	1.12989	Pitx3	ENSMUST00000125817.1|Sh3bp2|ENSMUSG00000054520.9|SH3-domain binding protein 2 	ENSMUST00000067638.7|Sh3bp2|ENSMUSG00000054520.9|SH3-domain binding protein 2
mm10_v2_chr2_+_76675265_76675287	1.12906	Pitx3	ENSMUST00000111920.1|Plekha3|ENSMUSG00000002733.8|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
mm10_v2_chr3_+_86070915_86070915	1.12862	Pitx3	ENSMUST00000182666.1|Sh3d19|ENSMUSG00000028082.7|SH3 domain protein D19
mm10_v2_chr5_-_90223923_90224020	1.12733	Pitx3	ENSMUST00000118816.1|Cox18|ENSMUSG00000035505.8|cytochrome c oxidase assembly protein 18 	ENSMUST00000048363.7|Cox18|ENSMUSG00000035505.8|cytochrome c oxidase assembly protein 18
mm10_v2_chr14_+_73173825_73173884	1.12495	Pitx3	ENSMUST00000166875.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm10_v2_chr9_-_45955226_45955250	1.12376	Pitx3	ENSMUST00000038488.9|Sidt2|ENSMUSG00000034908.9|SID1 transmembrane family, member 2
mm10_v2_chr17_-_12909912_12910000	1.12084	Pitx3	ENSMUST00000163394.1|Pnldc1|ENSMUSG00000073460.4|poly(A)-specific ribonuclease (PARN)-like domain containing 1
mm10_v2_chr11_+_70054334_70054360	1.11718	Pitx3	ENSMUST00000018699.6|Asgr1|ENSMUSG00000020884.9|asialoglycoprotein receptor 1 	ENSMUST00000108585.2|Asgr1|ENSMUSG00000020884.9|asialoglycoprotein receptor 1
mm10_v2_chr8_+_126422478_126422514	1.11569	Pitx3	ENSMUST00000059093.5|Coa6|ENSMUSG00000051671.6|cytochrome c oxidase assembly factor 6
mm10_v2_chr13_-_51203065_51203065	1.11515	Pitx3	ENSMUST00000091708.4|Hist1h2al|ENSMUSG00000091383.1|histone cluster 1, H2al
mm10_v2_chr4_+_12140263_12140317	1.11022	Pitx3	ENSMUST00000050069.2|Rbm12b1|ENSMUSG00000046667.8|RNA binding motif protein 12 B1 	ENSMUST00000069128.7|Rbm12b1|ENSMUSG00000046667.8|RNA binding motif protein 12 B1
mm10_v2_chr2_-_136891131_136891186	1.09933	Pitx3	ENSMUST00000144275.1|Mkks|ENSMUSG00000027274.10|McKusick-Kaufman syndrome
mm10_v2_chr4_+_155451570_155451570	1.09183	Pitx3	ENSMUST00000135407.1|C030017K20Rik|ENSMUSG00000078490.3|RIKEN cDNA C030017K20 gene 	ENSMUST00000105619.1|C030017K20Rik|ENSMUSG00000078490.3|RIKEN cDNA C030017K20 gene
mm10_v2_chr8_-_40634776_40634806	1.09121	Pitx3	ENSMUST00000048898.10|Mtmr7|ENSMUSG00000039431.10|myotubularin related protein 7 	ENSMUST00000174205.1|Mtmr7|ENSMUSG00000039431.10|myotubularin related protein 7
mm10_v2_chr16_+_18836573_18836583	1.08635	Pitx3	ENSMUST00000055413.6|2510002D24Rik|ENSMUSG00000071632.4|RIKEN cDNA 2510002D24 gene
mm10_v2_chr9_-_45955170_45955186	1.08444	Pitx3	ENSMUST00000162072.1|Sidt2|ENSMUSG00000034908.9|SID1 transmembrane family, member 2
mm10_v2_chr8_+_71542911_71542973	1.082	Pitx3	ENSMUST00000034272.7|Mvb12a|ENSMUSG00000031813.7|multivesicular body subunit 12A
mm10_v2_chr9_+_107542209_107542258	1.08173	Pitx3	ENSMUST00000010201.3|Nprl2|ENSMUSG00000010057.3|nitrogen permease regulator-like 2
mm10_v2_chr6_+_29859374_29859381	1.07749	Pitx3	ENSMUST00000115238.3|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr11_-_46690306_46690357	1.06091	Pitx3	ENSMUST00000169584.1|Timd2|ENSMUSG00000040413.9|T cell immunoglobulin and mucin domain containing 2
mm10_v2_chr13_-_67609667_67609707	1.05956	Pitx3	ENSMUST00000012873.8|AA987161|ENSMUSG00000058093.6|expressed sequence AA987161
mm10_v2_chr16_-_56037728_56037819	1.05871	Pitx3	ENSMUST00000059052.8|Trmt10c|ENSMUSG00000044763.8|tRNA methyltransferase 10C
mm10_v2_chr4_+_89137122_89137122	1.05759	Pitx3	ENSMUST00000058030.7|Mtap|ENSMUSG00000062937.5|methylthioadenosine phosphorylase
mm10_v2_chr11_-_120796369_120796405	1.05162	Pitx3	ENSMUST00000143139.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000129955.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000026151.4|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000167023.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000106133.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae) 	ENSMUST00000106135.1|Dus1l|ENSMUSG00000025155.9|dihydrouridine synthase 1-like (S. cerevisiae)
mm10_v2_chr5_+_24985840_24985862	1.05127	Pitx3	ENSMUST00000075081.6|1500035N22Rik|ENSMUSG00000059631.6|RIKEN cDNA 1500035N22 gene
mm10_v2_chr13_-_67609617_67609664	1.04129	Pitx3	ENSMUST00000138725.1|AA987161|ENSMUSG00000058093.6|expressed sequence AA987161
mm10_v2_chr8_+_109565892_109566031	1.04004	Pitx3	ENSMUST00000034159.1|Txnl4b|ENSMUSG00000031723.2|thioredoxin-like 4B
mm10_v2_chr8_-_67818284_67818320	1.03686	Pitx3	ENSMUST00000120071.1|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr6_+_114643094_114643105	1.03658	Pitx3	ENSMUST00000032457.10|Atg7|ENSMUSG00000030314.10|autophagy related 7
mm10_v2_chr8_-_70506710_70506766	1.03151	Pitx3	ENSMUST00000136913.1|2810428I15Rik|ENSMUSG00000058833.5|RIKEN cDNA 2810428I15 gene 	ENSMUST00000075175.5|2810428I15Rik|ENSMUSG00000058833.5|RIKEN cDNA 2810428I15 gene
mm10_v2_chr10_-_128180265_128180307	1.03135	Pitx3	ENSMUST00000099139.1|Rbms2|ENSMUSG00000040043.9|RNA binding motif, single stranded interacting protein 2
mm10_v2_chr15_-_103565069_103565088	1.03072	Pitx3	ENSMUST00000023134.3|Glycam1|ENSMUSG00000022491.4|glycosylation dependent cell adhesion molecule 1
mm10_v2_chr10_-_86011833_86011896	1.02931	Pitx3	ENSMUST00000105304.1|Bpifc|ENSMUSG00000050108.6|BPI fold containing family C 	ENSMUST00000061699.5|Bpifc|ENSMUSG00000050108.6|BPI fold containing family C
mm10_v2_chr16_-_38341812_38341859	1.02676	Pitx3	ENSMUST00000114740.2|Maats1|ENSMUSG00000022805.10|MYCBP-associated, testis expressed 1 	ENSMUST00000023501.8|Maats1|ENSMUSG00000022805.10|MYCBP-associated, testis expressed 1
mm10_v2_chr18_-_24530203_24530245	1.01783	Pitx3	ENSMUST00000046206.3|Rprd1a|ENSMUSG00000040446.3|regulation of nuclear pre-mRNA domain containing 1A
mm10_v2_chr5_-_125294107_125294136	1.0172	Pitx3	ENSMUST00000127148.1|Scarb1|ENSMUSG00000037936.9|scavenger receptor class B, member 1
mm10_v2_chr7_-_144738478_144738508	1.01248	Pitx3	ENSMUST00000121758.1|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel
mm10_v2_chr17_+_21423227_21423258	1.00767	Pitx3	ENSMUST00000165230.1|Zfp54|ENSMUSG00000023882.9|zinc finger protein 54 	ENSMUST00000007884.8|Zfp54|ENSMUSG00000023882.9|zinc finger protein 54 	ENSMUST00000167749.1|Zfp54|ENSMUSG00000023882.9|zinc finger protein 54
mm10_v2_chr11_-_59809774_59810016	0.994678	Pitx3	ENSMUST00000047706.2|Flcn|ENSMUSG00000032633.6|folliculin 	ENSMUST00000102697.3|Flcn|ENSMUSG00000032633.6|folliculin
mm10_v2_chr1_-_135167606_135167681	0.976337	Pitx3	ENSMUST00000027682.8|Gpr37l1|ENSMUSG00000026424.8|G protein-coupled receptor 37-like 1
mm10_v2_chr14_-_50795689_50795728	0.969192	Pitx3	ENSMUST00000095932.3|Ccnb1ip1|ENSMUSG00000071470.3|cyclin B1 interacting protein 1
mm10_v2_chr11_+_73047783_73047902	0.963086	Pitx3	ENSMUST00000021135.3|1200014J11Rik|ENSMUSG00000020783.8|RIKEN cDNA 1200014J11 gene
mm10_v2_chr4_-_141618238_141618238	0.961073	Pitx3	ENSMUST00000053263.8|Tmem82|ENSMUSG00000043085.8|transmembrane protein 82
mm10_v2_chr12_+_76072016_76072079	0.959924	Pitx3	ENSMUST00000131480.1|Syne2|ENSMUSG00000063450.8|spectrin repeat containing, nuclear envelope 2
mm10_v2_chr7_+_142303502_142303536	0.949934	Pitx3	ENSMUST00000061403.4|Krtap5-4|ENSMUSG00000045236.4|keratin associated protein 5-4
mm10_v2_chr10_+_128267997_128267997	0.945894	Pitx3	ENSMUST00000050901.2|Apof|ENSMUSG00000047631.2|apolipoprotein F
mm10_v2_chr2_+_79707780_79707927	0.941621	Pitx3	ENSMUST00000090760.2|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENSMUST00000040863.4|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENSMUST00000111780.2|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm10_v2_chrX_+_136707976_136708040	0.941329	Pitx3	ENSMUST00000055104.5|Tceal1|ENSMUSG00000049536.5|transcription elongation factor A (SII)-like 1
mm10_v2_chr14_+_20703027_20703077	0.940962	Pitx3	ENSMUST00000071215.3|Chchd1|ENSMUSG00000063787.3|coiled-coil-helix-coiled-coil-helix domain containing 1
mm10_v2_chr4_-_130279205_130279231	0.937714	Pitx3	ENSMUST00000120126.2|Serinc2|ENSMUSG00000023232.11|serine incorporator 2
mm10_v2_chr5_-_146963742_146963805	0.937496	Pitx3	ENSMUST00000125217.1|Mtif3|ENSMUSG00000016510.5|mitochondrial translational initiation factor 3 	ENSMUST00000110564.1|Mtif3|ENSMUSG00000016510.5|mitochondrial translational initiation factor 3 	ENSMUST00000066675.3|Mtif3|ENSMUSG00000016510.5|mitochondrial translational initiation factor 3 	ENSMUST00000016654.2|Mtif3|ENSMUSG00000016510.5|mitochondrial translational initiation factor 3 	ENSMUST00000110566.1|Mtif3|ENSMUSG00000016510.5|mitochondrial translational initiation factor 3 	ENSMUST00000140526.1|Mtif3|ENSMUSG00000016510.5|mitochondrial translational initiation factor 3
mm10_v2_chr10_+_18407658_18407715	0.935412	Pitx3	ENSMUST00000037341.7|Nhsl1|ENSMUSG00000039835.9|NHS-like 1
mm10_v2_chr13_-_99412816_99412864	0.931181	Pitx3	ENSMUST00000180808.1|6430562O15Rik|ENSMUSG00000097828.1|RIKEN cDNA 6430562O15 gene
mm10_v2_chr8_+_123062942_123062988	0.92767	Pitx3	ENSMUST00000142541.1|Spg7|ENSMUSG00000000738.11|spastic paraplegia 7 homolog (human) 	ENSMUST00000125975.1|Spg7|ENSMUSG00000000738.11|spastic paraplegia 7 homolog (human)
mm10_v2_chr7_+_110018301_110018425	0.925195	Pitx3	ENSMUST00000084731.3|Ipo7|ENSMUSG00000066232.3|importin 7
mm10_v2_chr7_-_122101735_122101886	0.925188	Pitx3	ENSMUST00000139456.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000106471.2|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000123296.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000033157.3|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm10_v2_chr5_+_124483458_124483491	0.922376	Pitx3	ENSMUST00000111453.1|Snrnp35|ENSMUSG00000029402.8|small nuclear ribonucleoprotein 35 (U11/U12)
mm10_v2_chr17_-_6079693_6079760	0.910508	Pitx3	ENSMUST00000024570.5|Serac1|ENSMUSG00000015659.6|serine active site containing 1 	ENSMUST00000097432.3|Serac1|ENSMUSG00000015659.6|serine active site containing 1
mm10_v2_chr11_+_78261717_78261803	0.90657	Pitx3	ENSMUST00000010421.6|2610507B11Rik|ENSMUSG00000010277.7|RIKEN cDNA 2610507B11 gene
mm10_v2_chr5_+_137778849_137778935	0.902026	Pitx3	ENSMUST00000126126.1|Ppp1r35|ENSMUSG00000029725.4|protein phosphatase 1, regulatory subunit 35 	ENSMUST00000031739.4|Ppp1r35|ENSMUSG00000029725.4|protein phosphatase 1, regulatory subunit 35
mm10_v2_chr2_-_119541513_119541513	0.889917	Pitx3	ENSMUST00000171024.1|Exd1|ENSMUSG00000048647.3|exonuclease 3'-5' domain containing 1
mm10_v2_chr2_+_113441064_113441079	0.889452	Pitx3	ENSMUST00000081349.6|Fmn1|ENSMUSG00000044042.12|formin 1
mm10_v2_chr9_+_54950782_54950797	0.889399	Pitx3	ENSMUST00000034848.7|Psma4|ENSMUSG00000032301.7|proteasome (prosome, macropain) subunit, alpha type 4
mm10_v2_chr17_+_74395607_74395639	0.887808	Pitx3	ENSMUST00000179074.1|Slc30a6|ENSMUSG00000024069.6|solute carrier family 30 (zinc transporter), member 6 	ENSMUST00000024870.6|Slc30a6|ENSMUSG00000024069.6|solute carrier family 30 (zinc transporter), member 6
mm10_v2_chr2_+_104886318_104886344	0.883513	Pitx3	ENSMUST00000111114.1|Ccdc73|ENSMUSG00000045106.6|coiled-coil domain containing 73
mm10_v2_chr6_+_149130170_149130170	0.880605	Pitx3	ENSMUST00000087348.3|Gm10203|ENSMUSG00000067292.3|predicted gene 10203
mm10_v2_chr1_-_153408429_153408429	0.880137	Pitx3	ENSMUST00000097535.4|E330020D12Rik|ENSMUSG00000073538.4|Riken cDNA E330020D12 gene
mm10_v2_chr10_+_81718919_81718919	0.879886	Pitx3	ENSMUST00000085664.5|Zfp433|ENSMUSG00000096795.1|RIKEN cDNA 1700123A16 gene
mm10_v2_chr1_+_16665189_16665264	0.876691	Pitx3	ENSMUST00000177501.1|Tmem70|ENSMUSG00000025940.6|transmembrane protein 70 	ENSMUST00000065373.5|Tmem70|ENSMUSG00000025940.6|transmembrane protein 70
mm10_v2_chr1_+_87190624_87190652	0.87455	Pitx3	ENSMUST00000073252.2|Chrnd|ENSMUSG00000026251.7|cholinergic receptor, nicotinic, delta polypeptide
mm10_v2_chr11_-_84068766_84068801	0.874146	Pitx3	ENSMUST00000018792.5|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr2_-_30093642_30093679	0.866407	Pitx3	ENSMUST00000102865.4|Zdhhc12|ENSMUSG00000015335.10|zinc finger, DHHC domain containing 12
mm10_v2_chr13_-_21501418_21501418	0.864434	Pitx3	ENSMUST00000044043.2|Gm11273|ENSMUSG00000079941.1|predicted gene 11273
mm10_v2_chr3_-_88334482_88334504	0.862696	Pitx3	ENSMUST00000001456.4|Tmem79|ENSMUSG00000001420.7|transmembrane protein 79
mm10_v2_chr12_+_87026286_87026297	0.861662	Pitx3	ENSMUST00000146292.1|Tmem63c|ENSMUSG00000034145.8|transmembrane protein 63c
mm10_v2_chr9_+_107580117_107580117	0.861542	Pitx3	ENSMUST00000093785.4|Nat6|ENSMUSG00000079334.2|N-acetyltransferase 6
mm10_v2_chr2_-_127208274_127208289	0.86116	Pitx3	ENSMUST00000056146.1|1810024B03Rik|ENSMUSG00000044145.2|RIKEN cDNA 1810024B03 gene
mm10_v2_chr16_+_11406618_11406675	0.860732	Pitx3	ENSMUST00000122168.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr2_-_155930190_155930310	0.85935	Pitx3	ENSMUST00000109636.4|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000109631.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1
mm10_v2_chr7_+_45155865_45155943	0.859268	Pitx3	ENSMUST00000107811.1|Pih1d1|ENSMUSG00000003423.8|PIH1 domain containing 1
mm10_v2_chr13_+_41655697_41655697	0.848767	Pitx3	ENSMUST00000067176.8|Gm5082|ENSMUSG00000054258.8|predicted gene 5082
mm10_v2_chr14_-_59395381_59395381	0.843525	Pitx3	ENSMUST00000166912.2|Phf11c|ENSMUSG00000091144.2|PHD finger protein 11C
mm10_v2_chr5_-_138155694_138155744	0.842817	Pitx3	ENSMUST00000132318.1|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113 	ENSMUST00000049393.8|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113
mm10_v2_chr7_+_6995443_6995443	0.834353	Pitx3	ENSMUST00000086248.5|Aurkc|ENSMUSG00000070837.4|aurora kinase C
mm10_v2_chr14_-_50897456_50897507	0.834054	Pitx3	ENSMUST00000170855.1|A930018M24Rik|ENSMUSG00000091089.1|RIKEN cDNA A930018M24 gene
mm10_v2_chr9_-_22208546_22208546	0.833828	Pitx3	ENSMUST00000167359.1|1810064F22Rik|ENSMUSG00000090925.1|RIKEN cDNA 1810064F22 gene
mm10_v2_chrX_-_51801078_51801233	0.830942	Pitx3	ENSMUST00000069509.3|Usp26|ENSMUSG00000055780.4|ubiquitin specific peptidase 26 	ENSMUST00000114869.1|Usp26|ENSMUSG00000055780.4|ubiquitin specific peptidase 26
mm10_v2_chr10_+_24447468_24447490	0.829239	Pitx3	ENSMUST00000134627.1|Gm15271|ENSMUSG00000086148.1|predicted gene 15271
mm10_v2_chrX_-_61185558_61185558	0.826678	Pitx3	ENSMUST00000166381.1|Cdr1|ENSMUSG00000090546.1|cerebellar degeneration related antigen 1
mm10_v2_chr3_+_85915722_85915722	0.826308	Pitx3	ENSMUST00000054148.7|Gm9790|ENSMUSG00000044330.7|predicted gene 9790
mm10_v2_chrY_+_66123648_66123648	0.823474	Pitx3	ENSMUST00000180028.1|Gm21837|ENSMUSG00000096739.1|predicted gene, 21837
mm10_v2_chrY_-_53486001_53486001	0.823474	Pitx3	ENSMUST00000178580.1|Gm21906|ENSMUSG00000095177.1|predicted gene, 21906
mm10_v2_chr4_-_138624001_138624021	0.823302	Pitx3	ENSMUST00000030533.5|Vwa5b1|ENSMUSG00000028753.6|von Willebrand factor A domain containing 5B1
mm10_v2_chr3_-_10351313_10351342	0.822892	Pitx3	ENSMUST00000108377.1|Zfand1|ENSMUSG00000039795.8|zinc finger, AN1-type domain 1 	ENSMUST00000037839.5|Zfand1|ENSMUSG00000039795.8|zinc finger, AN1-type domain 1
mm10_v2_chr11_+_120673018_120673083	0.820841	Pitx3	ENSMUST00000106158.2|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human) 	ENSMUST00000103016.1|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human) 	ENSMUST00000168714.1|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm10_v2_chr11_+_87405049_87405113	0.819023	Pitx3	ENSMUST00000060835.5|Tex14|ENSMUSG00000010342.10|testis expressed gene 14
mm10_v2_chr12_-_88274500_88274500	0.815203	Pitx3	ENSMUST00000101168.3|Gm5662|ENSMUSG00000079029.2|predicted gene 5662
mm10_v2_chr10_+_81606883_81607025	0.806138	Pitx3	ENSMUST00000119753.1|BC025920|ENSMUSG00000074862.5|cDNA sequence BC025920 	ENSMUST00000121138.1|BC025920|ENSMUSG00000074862.5|cDNA sequence BC025920 	ENSMUST00000099442.3|BC025920|ENSMUSG00000074862.5|cDNA sequence BC025920
mm10_v2_chr1_-_16093286_16093341	0.804822	Pitx3	ENSMUST00000145070.1|4930444P10Rik|ENSMUSG00000067795.7|RIKEN cDNA 4930444P10 gene 	ENSMUST00000151004.1|4930444P10Rik|ENSMUSG00000067795.7|RIKEN cDNA 4930444P10 gene
mm10_v2_chr1_-_157256682_157256701	0.80438	Pitx3	ENSMUST00000134543.1|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2
mm10_v2_chr2_+_153161303_153161339	0.801958	Pitx3	ENSMUST00000089027.2|Tm9sf4|ENSMUSG00000068040.4|transmembrane 9 superfamily protein member 4
mm10_v2_chr2_-_30359278_30359341	0.798562	Pitx3	ENSMUST00000163668.2|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2 	ENSMUST00000028214.8|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2 	ENSMUST00000113621.3|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2
mm10_v2_chr4_+_141746672_141746759	0.797563	Pitx3	ENSMUST00000038161.4|Agmat|ENSMUSG00000040706.4|agmatine ureohydrolase (agmatinase)
mm10_v2_chr17_+_24669730_24669752	0.796446	Pitx3	ENSMUST00000047179.5|Zfp598|ENSMUSG00000041130.9|zinc finger protein 598
mm10_v2_chr14_-_63049891_63049960	0.79608	Pitx3	ENSMUST00000111209.1|Defb30|ENSMUSG00000075571.2|defensin beta 30 	ENSMUST00000111208.1|Defb30|ENSMUSG00000075571.2|defensin beta 30
mm10_v2_chr8_+_70527724_70527766	0.794844	Pitx3	ENSMUST00000119353.2|Fkbp8|ENSMUSG00000019428.10|FK506 binding protein 8 	ENSMUST00000075491.7|Fkbp8|ENSMUSG00000019428.10|FK506 binding protein 8
mm10_v2_chr9_+_88839164_88839164	0.792167	Pitx3	ENSMUST00000163255.2|Trim43c|ENSMUSG00000067399.4|tripartite motif-containing 43C
mm10_v2_chr6_-_149188648_149188725	0.783974	Pitx3	ENSMUST00000095319.3|Amn1|ENSMUSG00000068250.7|antagonist of mitotic exit network 1 	ENSMUST00000141346.1|Amn1|ENSMUSG00000068250.7|antagonist of mitotic exit network 1 	ENSMUST00000111535.1|Amn1|ENSMUSG00000068250.7|antagonist of mitotic exit network 1
mm10_v2_chr7_-_30671571_30671594	0.782022	Pitx3	ENSMUST00000051495.5|Pmis2|ENSMUSG00000049761.5|Pmis2, sperm specific protein
mm10_v2_chr13_+_8952863_8952863	0.780368	Pitx3	ENSMUST00000038598.1|Idi2|ENSMUSG00000033520.1|isopentenyl-diphosphate delta isomerase 2
mm10_v2_chr5_+_121749196_121749196	0.777357	Pitx3	ENSMUST00000161064.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr18_-_9726670_9726670	0.777352	Pitx3	ENSMUST00000171339.1|Gm17430|ENSMUSG00000091285.1|predicted gene, 17430
mm10_v2_chr12_-_54862783_54862921	0.776052	Pitx3	ENSMUST00000078124.7|Cfl2|ENSMUSG00000062929.7|cofilin 2, muscle
mm10_v2_chr4_-_45489794_45489794	0.774606	Pitx3	ENSMUST00000146236.1|Shb|ENSMUSG00000044813.9|src homology 2 domain-containing transforming protein B
mm10_v2_chr10_-_71238274_71238288	0.77419	Pitx3	ENSMUST00000092430.4|Tfam|ENSMUSG00000003923.8|transcription factor A, mitochondrial 	ENSMUST00000105432.3|Tfam|ENSMUSG00000003923.8|transcription factor A, mitochondrial
mm10_v2_chr11_-_99521258_99521295	0.773677	Pitx3	ENSMUST00000076948.1|Krt39|ENSMUSG00000064165.2|keratin 39
mm10_v2_chr8_-_67818218_67818269	0.773472	Pitx3	ENSMUST00000059374.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr15_+_99295087_99295279	0.773224	Pitx3	ENSMUST00000128352.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast) 	ENSMUST00000145482.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast)
mm10_v2_chr4_-_149099802_149099876	0.773163	Pitx3	ENSMUST00000103217.4|Pex14|ENSMUSG00000028975.10|peroxisomal biogenesis factor 14
mm10_v2_chr12_+_24498570_24498587	0.77264	Pitx3	ENSMUST00000075954.7|Taf1b|ENSMUSG00000059669.7|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B
mm10_v2_chr4_+_41135743_41135898	0.770048	Pitx3	ENSMUST00000040008.3|Ube2r2|ENSMUSG00000036241.3|ubiquitin-conjugating enzyme E2R 2
mm10_v2_chr16_+_59471775_59471861	0.766773	Pitx3	ENSMUST00000023407.5|Mina|ENSMUSG00000022724.9|myc induced nuclear antigen 	ENSMUST00000120667.1|Mina|ENSMUSG00000022724.9|myc induced nuclear antigen 	ENSMUST00000120674.1|Mina|ENSMUSG00000022724.9|myc induced nuclear antigen
mm10_v2_chrY_+_13495642_13495642	0.764556	Pitx3	ENSMUST00000178940.1|Gm20773|ENSMUSG00000095900.1|predicted gene, 20773
mm10_v2_chr11_+_120672992_120673009	0.76452	Pitx3	ENSMUST00000026135.8|Aspscr1|ENSMUSG00000025142.11|alveolar soft part sarcoma chromosome region, candidate 1 (human)
mm10_v2_chr9_+_54950808_54950820	0.760597	Pitx3	ENSMUST00000172407.1|Psma4|ENSMUSG00000032301.7|proteasome (prosome, macropain) subunit, alpha type 4
mm10_v2_chr2_-_168734236_168734339	0.757967	Pitx3	ENSMUST00000109175.2|Atp9a|ENSMUSG00000027546.9|ATPase, class II, type 9A
mm10_v2_chr1_+_15805639_15805675	0.756089	Pitx3	ENSMUST00000027057.6|Terf1|ENSMUSG00000025925.8|telomeric repeat binding factor 1
mm10_v2_chr2_-_30359190_30359272	0.754844	Pitx3	ENSMUST00000100215.4|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2 	ENSMUST00000113620.3|Sh3glb2|ENSMUSG00000026860.10|SH3-domain GRB2-like endophilin B2
mm10_v2_chr7_-_15627876_15627876	0.75394	Pitx3	ENSMUST00000086122.3|Obox3|ENSMUSG00000066772.6|oocyte specific homeobox 3 	ENSMUST00000174443.1|Obox3|ENSMUSG00000066772.6|oocyte specific homeobox 3
mm10_v2_chr14_-_77036081_77036081	0.753694	Pitx3	ENSMUST00000142300.1|Lacc1|ENSMUSG00000044350.8|laccase (multicopper oxidoreductase) domain containing 1
mm10_v2_chr2_-_4652086_4652140	0.753568	Pitx3	ENSMUST00000035721.7|Prpf18|ENSMUSG00000039449.8|PRP18 pre-mRNA processing factor 18 homolog (yeast) 	ENSMUST00000152362.1|Prpf18|ENSMUSG00000039449.8|PRP18 pre-mRNA processing factor 18 homolog (yeast)
mm10_v2_chr7_+_127983079_127983079	0.749454	Pitx3	ENSMUST00000079045.2|B230325K18Rik|ENSMUSG00000063254.2|RIKEN cDNA B230325K18 gene
mm10_v2_chr15_-_76660061_76660098	0.749429	Pitx3	ENSMUST00000081291.6|Cyhr1|ENSMUSG00000053929.10|cysteine and histidine rich 1
mm10_v2_chr2_+_58470116_58470116	0.747479	Pitx3	ENSMUST00000167423.1|Gm17409|ENSMUSG00000091922.1|predicted gene, 17409
mm10_v2_chr7_+_120635176_120635251	0.744434	Pitx3	ENSMUST00000033176.5|Uqcrc2|ENSMUSG00000030884.5|ubiquinol cytochrome c reductase core protein 2
mm10_v2_chr17_+_36547075_36547075	0.743961	Pitx3	ENSMUST00000041964.6|H2-M11|ENSMUSG00000037537.6|histocompatibility 2, M region locus 11
mm10_v2_chr13_-_23488840_23488857	0.738735	Pitx3	ENSMUST00000041541.4|Btn2a2|ENSMUSG00000053216.8|butyrophilin, subfamily 2, member A2 	ENSMUST00000110432.1|Btn2a2|ENSMUSG00000053216.8|butyrophilin, subfamily 2, member A2 	ENSMUST00000110433.3|Btn2a2|ENSMUSG00000053216.8|butyrophilin, subfamily 2, member A2
mm10_v2_chr7_-_126583177_126583255	0.738485	Pitx3	ENSMUST00000098036.2|Cln3|ENSMUSG00000030720.10|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) 	ENSMUST00000032962.4|Cln3|ENSMUSG00000030720.10|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm10_v2_chr16_-_38713235_38713304	0.73782	Pitx3	ENSMUST00000023487.4|Arhgap31|ENSMUSG00000022799.4|Rho GTPase activating protein 31
mm10_v2_chr15_+_82069996_82069996	0.73683	Pitx3	ENSMUST00000089178.3|Mei1|ENSMUSG00000068117.3|meiosis defective 1
mm10_v2_chr14_+_74735641_74735663	0.734809	Pitx3	ENSMUST00000177283.1|Esd|ENSMUSG00000021996.10|esterase D/formylglutathione hydrolase
mm10_v2_chr2_-_152464612_152464640	0.73466	Pitx3	ENSMUST00000099206.2|Defb23|ENSMUSG00000074681.2|defensin beta 23
mm10_v2_chr5_-_24555428_24555469	0.734586	Pitx3	ENSMUST00000088302.5|4931409K22Rik|ENSMUSG00000038199.8|RIKEN cDNA 4931409K22 gene
mm10_v2_chr4_+_144059126_144059139	0.733837	Pitx3	ENSMUST00000091676.5|Pramel4|ENSMUSG00000073724.6|preferentially expressed antigen in melanoma like 4 	ENSMUST00000133626.1|Pramel4|ENSMUSG00000073724.6|preferentially expressed antigen in melanoma like 4
mm10_v2_chr16_-_38550173_38550258	0.732451	Pitx3	ENSMUST00000036210.6|Poglut1|ENSMUSG00000034064.8|protein O-glucosyltransferase 1
mm10_v2_chr17_+_47769191_47769238	0.731388	Pitx3	ENSMUST00000160373.1|Tfeb|ENSMUSG00000023990.12|transcription factor EB 	ENSMUST00000159641.1|Tfeb|ENSMUSG00000023990.12|transcription factor EB
mm10_v2_chr5_-_127617372_127617426	0.730483	Pitx3	ENSMUST00000031367.8|Slc15a4|ENSMUSG00000029416.11|solute carrier family 15, member 4
mm10_v2_chr19_+_44992127_44992136	0.729785	Pitx3	ENSMUST00000179305.1|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chr10_-_127620960_127621031	0.724448	Pitx3	ENSMUST00000121829.1|Lrp1|ENSMUSG00000040249.9|low density lipoprotein receptor-related protein 1
mm10_v2_chr10_-_80657071_80657098	0.722388	Pitx3	ENSMUST00000003434.7|Btbd2|ENSMUSG00000003344.8|BTB (POZ) domain containing 2
mm10_v2_chr7_-_34196608_34196675	0.721455	Pitx3	ENSMUST00000148381.1|Pdcd2l|ENSMUSG00000002635.5|programmed cell death 2-like 	ENSMUST00000002710.3|Pdcd2l|ENSMUSG00000002635.5|programmed cell death 2-like
mm10_v2_chr3_+_55112080_55112171	0.720414	Pitx3	ENSMUST00000044116.7|Spg20|ENSMUSG00000036580.9|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) 	ENSMUST00000107971.2|Spg20|ENSMUSG00000036580.9|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) 	ENSMUST00000118118.1|Spg20|ENSMUSG00000036580.9|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
mm10_v2_chr9_+_37208291_37208360	0.718858	Pitx3	ENSMUST00000034632.8|Tmem218|ENSMUSG00000032121.8|transmembrane protein 218
mm10_v2_chr17_-_56609689_56609771	0.717395	Pitx3	ENSMUST00000052832.5|2410015M20Rik|ENSMUSG00000049760.5|RIKEN cDNA 2410015M20 gene
mm10_v2_chr16_-_15594507_15594531	0.717147	Pitx3	ENSMUST00000115776.1|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2 	ENSMUST00000115777.3|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2
mm10_v2_chr4_+_144065698_144065732	0.708086	Pitx3	ENSMUST00000084191.2|Pramel4|ENSMUSG00000073724.6|preferentially expressed antigen in melanoma like 4 	ENSMUST00000094520.4|Pramel4|ENSMUSG00000073724.6|preferentially expressed antigen in melanoma like 4
mm10_v2_chr4_-_59138983_59138983	0.702357	Pitx3	ENSMUST00000107547.1|AI481877|ENSMUSG00000038598.9|expressed sequence AI481877
mm10_v2_chr12_+_87874070_87874075	0.700753	Pitx3	ENSMUST00000110147.2|Gm2016|ENSMUSG00000072905.5|predicted gene 2016
mm10_v2_chr7_-_7209998_7209998	0.700563	Pitx3	ENSMUST00000074455.7|Zfp772|ENSMUSG00000066838.6|zinc finger protein 772
mm10_v2_chr11_-_99521336_99521340	0.694401	Pitx3	ENSMUST00000107445.1|Krt39|ENSMUSG00000064165.2|keratin 39
mm10_v2_chr7_+_15882617_15882653	0.693119	Pitx3	ENSMUST00000125993.1|Crxos1|ENSMUSG00000074365.7|Crx opposite strand transcript 1 	ENSMUST00000130566.1|Crxos1|ENSMUSG00000074365.7|Crx opposite strand transcript 1
mm10_v2_chr7_-_3169145_3169203	0.691631	Pitx3	ENSMUST00000171749.1|AU018091|ENSMUSG00000054753.8|expressed sequence AU018091
mm10_v2_chr7_-_25398697_25398719	0.689767	Pitx3	ENSMUST00000105177.2|Lipe|ENSMUSG00000003123.9|lipase, hormone sensitive 	ENSMUST00000149349.1|Lipe|ENSMUSG00000003123.9|lipase, hormone sensitive
mm10_v2_chr5_+_110230975_110231099	0.688419	Pitx3	ENSMUST00000031474.7|Ankle2|ENSMUSG00000029501.8|ankyrin repeat and LEM domain containing 2 	ENSMUST00000086674.5|Ankle2|ENSMUSG00000029501.8|ankyrin repeat and LEM domain containing 2
mm10_v2_chr9_+_69397897_69397928	0.685173	Pitx3	ENSMUST00000034761.8|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2 	ENSMUST00000125938.1|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2
mm10_v2_chr14_-_56159579_56159597	0.683106	Pitx3	ENSMUST00000015578.4|Gzmg|ENSMUSG00000040284.4|granzyme G
mm10_v2_chr7_-_81855794_81855794	0.682446	Pitx3	ENSMUST00000085094.3|Gm10160|ENSMUSG00000066378.3|predicted gene 10160
mm10_v2_chr2_-_73312701_73312724	0.682208	Pitx3	ENSMUST00000058615.9|Cir1|ENSMUSG00000041777.11|corepressor interacting with RBPJ, 1
mm10_v2_chr9_+_37401897_37401980	0.678911	Pitx3	ENSMUST00000115048.1|Robo4|ENSMUSG00000032125.13|roundabout homolog 4 (Drosophila)
mm10_v2_chr12_+_4843303_4843419	0.678816	Pitx3	ENSMUST00000053034.4|BC068281|ENSMUSG00000051721.4|cDNA sequence BC068281
mm10_v2_chr6_-_90224438_90224438	0.677689	Pitx3	ENSMUST00000076086.2|Vmn1r53|ENSMUSG00000057697.2|vomeronasal 1 receptor 53
mm10_v2_chr17_-_8566869_8566869	0.676746	Pitx3	ENSMUST00000184183.1|Gm17087|ENSMUSG00000099104.1|predicted gene 17087
mm10_v2_chr3_+_107090874_107090905	0.676092	Pitx3	ENSMUST00000060946.3|A930002I21Rik|ENSMUSG00000050179.3|RIKEN cDNA A930002I21 gene 	ENSMUST00000182132.1|A930002I21Rik|ENSMUSG00000050179.3|RIKEN cDNA A930002I21 gene
mm10_v2_chr4_+_155812489_155812529	0.675427	Pitx3	ENSMUST00000030944.4|Ccnl2|ENSMUSG00000029068.10|cyclin L2
mm10_v2_chr6_+_58833689_58833734	0.673744	Pitx3	ENSMUST00000041401.8|Herc3|ENSMUSG00000029804.10|hect domain and RLD 3
mm10_v2_chr16_+_48283735_48283735	0.670854	Pitx3	ENSMUST00000096045.1|Dppa4|ENSMUSG00000058550.8|developmental pluripotency associated 4 	ENSMUST00000050705.2|Dppa4|ENSMUSG00000058550.8|developmental pluripotency associated 4
mm10_v2_chr5_-_76331102_76331142	0.668176	Pitx3	ENSMUST00000122213.1|Pdcl2|ENSMUSG00000029235.8|phosducin-like 2
mm10_v2_chr5_-_62766153_62766246	0.667471	Pitx3	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr10_-_127620922_127620943	0.665385	Pitx3	ENSMUST00000118455.1|Lrp1|ENSMUSG00000040249.9|low density lipoprotein receptor-related protein 1
mm10_v2_chr7_-_141100526_141100551	0.661867	Pitx3	ENSMUST00000097958.2|Sigirr|ENSMUSG00000025494.7|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
mm10_v2_chr1_-_156032948_156032978	0.653366	Pitx3	ENSMUST00000136397.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chr10_-_53379816_53379858	0.652925	Pitx3	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr9_-_29963112_29963141	0.652182	Pitx3	ENSMUST00000075069.4|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr3_-_103732553_103732553	0.651832	Pitx3	ENSMUST00000169286.1|BC027582|ENSMUSG00000091115.1|cDNA sequence BC027582
mm10_v2_chr3_-_88456397_88456441	0.649916	Pitx3	ENSMUST00000141471.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENSMUST00000123753.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr6_+_134035691_134035717	0.64943	Pitx3	ENSMUST00000081028.6|Etv6|ENSMUSG00000030199.10|ets variant gene 6 (TEL oncogene) 	ENSMUST00000111963.1|Etv6|ENSMUSG00000030199.10|ets variant gene 6 (TEL oncogene)
mm10_v2_chr4_+_144106474_144106531	0.648483	Pitx3	ENSMUST00000097800.2|Gm13102|ENSMUSG00000073723.4|predicted gene 13102 	ENSMUST00000097799.2|Gm13102|ENSMUSG00000073723.4|predicted gene 13102 	ENSMUST00000105761.3|Gm13102|ENSMUSG00000073723.4|predicted gene 13102
mm10_v2_chrX_+_103630575_103630597	0.648258	Pitx3	ENSMUST00000033692.7|Zcchc13|ENSMUSG00000031330.7|zinc finger, CCHC domain containing 13
mm10_v2_chrY_-_87447885_87447885	0.646608	Pitx3	ENSMUST00000178784.1|Gm21813|ENSMUSG00000095083.1|predicted gene, 21813
mm10_v2_chrX_-_167102059_167102090	0.646504	Pitx3	ENSMUST00000146929.1|Gm15232|ENSMUSG00000084806.1|predicted gene 15232
mm10_v2_chr2_-_30093607_30093641	0.645282	Pitx3	ENSMUST00000081838.6|Zdhhc12|ENSMUSG00000015335.10|zinc finger, DHHC domain containing 12
mm10_v2_chr9_+_109931458_109931488	0.64474	Pitx3	ENSMUST00000072772.5|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4 	ENSMUST00000035055.8|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4
mm10_v2_chr6_-_43309554_43309554	0.642054	Pitx3	ENSMUST00000031749.9|Nobox|ENSMUSG00000029736.9|NOBOX oogenesis homeobox
mm10_v2_chr17_+_23605505_23605515	0.638187	Pitx3	ENSMUST00000117606.1|Zscan10|ENSMUSG00000023902.12|zinc finger and SCAN domain containing 10 	ENSMUST00000118369.1|Zscan10|ENSMUSG00000023902.12|zinc finger and SCAN domain containing 10 	ENSMUST00000138487.1|Zscan10|ENSMUSG00000023902.12|zinc finger and SCAN domain containing 10
mm10_v2_chr6_-_71144338_71144356	0.638065	Pitx3	ENSMUST00000074241.7|Thnsl2|ENSMUSG00000054474.9|threonine synthase-like 2 (bacterial) 	ENSMUST00000160918.1|Thnsl2|ENSMUSG00000054474.9|threonine synthase-like 2 (bacterial)
mm10_v2_chr7_-_4524229_4524355	0.636776	Pitx3	ENSMUST00000154913.1|Tnni3|ENSMUSG00000035458.8|troponin I, cardiac 3
mm10_v2_chr4_+_146157690_146157690	0.636298	Pitx3	ENSMUST00000092750.5|Zfp600|ENSMUSG00000066007.9|zinc finger protein 600
mm10_v2_chr8_+_122376676_122376701	0.634281	Pitx3	ENSMUST00000176629.1|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18
mm10_v2_chr5_-_76331150_76331161	0.633866	Pitx3	ENSMUST00000031145.6|Pdcl2|ENSMUSG00000029235.8|phosducin-like 2
mm10_v2_chr17_+_13234871_13234871	0.633561	Pitx3	ENSMUST00000059824.6|Smok2b|ENSMUSG00000073457.3|sperm motility kinase 2B
mm10_v2_chr14_-_50681645_50681645	0.630325	Pitx3	ENSMUST00000078075.4|Olfr747|ENSMUSG00000057179.4|olfactory receptor 747
mm10_v2_chr11_-_84068554_84068604	0.629428	Pitx3	ENSMUST00000164891.1|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr11_-_58534825_58534825	0.628783	Pitx3	ENSMUST00000170009.1|Olfr330|ENSMUSG00000050818.3|olfactory receptor 330
mm10_v2_chr7_-_7337493_7337531	0.627805	Pitx3	ENSMUST00000072475.6|Vmn2r30|ENSMUSG00000070847.5|vomeronasal 2, receptor 30 	ENSMUST00000174368.1|Vmn2r30|ENSMUSG00000070847.5|vomeronasal 2, receptor 30
mm10_v2_chr8_-_79399513_79399532	0.626555	Pitx3	ENSMUST00000066091.7|Smad1|ENSMUSG00000031681.8|SMAD family member 1 	ENSMUST00000109885.1|Smad1|ENSMUSG00000031681.8|SMAD family member 1 	ENSMUST00000066081.3|Smad1|ENSMUSG00000031681.8|SMAD family member 1
mm10_v2_chr11_+_54866413_54866481	0.626071	Pitx3	ENSMUST00000117710.1|Hint1|ENSMUSG00000020267.6|histidine triad nucleotide binding protein 1
mm10_v2_chr11_+_60454587_60454657	0.624716	Pitx3	ENSMUST00000018568.3|Drg2|ENSMUSG00000020537.3|developmentally regulated GTP binding protein 2
mm10_v2_chr17_-_12851893_12851916	0.624704	Pitx3	ENSMUST00000162389.1|Mas1|ENSMUSG00000068037.4|MAS1 oncogene 	ENSMUST00000162119.1|Mas1|ENSMUSG00000068037.4|MAS1 oncogene 	ENSMUST00000159223.1|Mas1|ENSMUSG00000068037.4|MAS1 oncogene
mm10_v2_chr11_-_93965957_93966043	0.624642	Pitx3	ENSMUST00000021220.3|Nme1|ENSMUSG00000037601.5|NME/NM23 nucleoside diphosphate kinase 1
mm10_v2_chr17_+_24896488_24896530	0.624559	Pitx3	ENSMUST00000024978.6|Nme3|ENSMUSG00000073435.4|NME/NM23 nucleoside diphosphate kinase 3
mm10_v2_chr18_+_31804057_31804120	0.622765	Pitx3	ENSMUST00000025264.6|Wdr33|ENSMUSG00000024400.9|WD repeat domain 33 	ENSMUST00000082319.7|Wdr33|ENSMUSG00000024400.9|WD repeat domain 33
mm10_v2_chr9_+_75347755_75347763	0.622562	Pitx3	ENSMUST00000034709.5|Bcl2l10|ENSMUSG00000032191.5|Bcl2-like 10
mm10_v2_chr7_+_45513701_45513710	0.616682	Pitx3	ENSMUST00000107762.1|Tulp2|ENSMUSG00000023467.10|tubby-like protein 2
mm10_v2_chr4_+_47386216_47386265	0.616049	Pitx3	ENSMUST00000107725.2|Tgfbr1|ENSMUSG00000007613.9|transforming growth factor, beta receptor I
mm10_v2_chr12_+_87514315_87514319	0.61312	Pitx3	ENSMUST00000110152.2|Gm8300|ENSMUSG00000079034.2|predicted gene 8300
mm10_v2_chr2_+_156008045_156008085	0.611338	Pitx3	ENSMUST00000006035.6|Ergic3|ENSMUSG00000005881.7|ERGIC and golgi 3
mm10_v2_chr4_-_138913915_138913983	0.607774	Pitx3	ENSMUST00000097830.3|Otud3|ENSMUSG00000041161.8|OTU domain containing 3
mm10_v2_chr11_-_62457772_62457835	0.603912	Pitx3	ENSMUST00000127471.2|Ncor1|ENSMUSG00000018501.11|nuclear receptor co-repressor 1
mm10_v2_chr3_+_135348029_135348085	0.601907	Pitx3	ENSMUST00000159658.1|Slc9b1|ENSMUSG00000050150.10|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 	ENSMUST00000078568.5|Slc9b1|ENSMUSG00000050150.10|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 	ENSMUST00000160460.1|Slc9b1|ENSMUSG00000050150.10|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
mm10_v2_chr15_+_54952939_54952975	0.601409	Pitx3	ENSMUST00000181704.1|Gm26684|ENSMUSG00000097286.1|predicted gene, 26684
mm10_v2_chr12_-_85097080_85097091	0.601199	Pitx3	ENSMUST00000177289.2|Prox2|ENSMUSG00000042320.10|prospero homeobox 2
mm10_v2_chr16_-_15594472_15594503	0.598795	Pitx3	ENSMUST00000118236.1|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2 	ENSMUST00000096234.3|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2
mm10_v2_chr1_+_171331414_171331426	0.597093	Pitx3	ENSMUST00000097467.1|Dedd|ENSMUSG00000013973.6|death effector domain-containing
mm10_v2_chr16_+_4741543_4741592	0.59531	Pitx3	ENSMUST00000120232.1|Hmox2|ENSMUSG00000004070.9|heme oxygenase (decycling) 2
mm10_v2_chrY_-_86366423_86366423	0.594851	Pitx3	ENSMUST00000178478.1|Gm20861|ENSMUSG00000095838.1|predicted gene, 20861
mm10_v2_chrY_-_10750826_10750826	0.593555	Pitx3	ENSMUST00000177818.1|Gm20777|ENSMUSG00000094813.1|predicted gene, 20777
mm10_v2_chr6_+_86438360_86438405	0.593048	Pitx3	ENSMUST00000050497.7|C87436|ENSMUSG00000046679.10|expressed sequence C87436
mm10_v2_chr19_-_61176309_61176309	0.592294	Pitx3	ENSMUST00000180168.1|Gm7102|ENSMUSG00000094649.1|predicted gene 7102
mm10_v2_chr8_+_85060055_85060135	0.591005	Pitx3	ENSMUST00000095220.3|Fbxw9|ENSMUSG00000008167.8|F-box and WD-40 domain protein 9
mm10_v2_chr16_+_35938470_35938489	0.5899	Pitx3	ENSMUST00000114878.1|Parp9|ENSMUSG00000022906.9|poly (ADP-ribose) polymerase family, member 9
mm10_v2_chr6_+_115544664_115544712	0.588247	Pitx3	ENSMUST00000040234.7|Tsen2|ENSMUSG00000042389.7|tRNA splicing endonuclease 2 homolog (S. cerevisiae)
mm10_v2_chrY_-_82163360_82163360	0.586678	Pitx3	ENSMUST00000179406.1|Gm21825|ENSMUSG00000094209.1|predicted gene, 21825
mm10_v2_chr14_-_56132590_56132608	0.585716	Pitx3	ENSMUST00000082093.6|Gzmd|ENSMUSG00000059256.6|granzyme D
mm10_v2_chrY_+_38605676_38605676	0.583409	Pitx3	ENSMUST00000180228.1|Gm21765|ENSMUSG00000095875.1|predicted gene, 21765
mm10_v2_chr2_+_156008088_156008138	0.58102	Pitx3	ENSMUST00000088650.4|Ergic3|ENSMUSG00000005881.7|ERGIC and golgi 3
mm10_v2_chr2_-_121473993_121474067	0.57954	Pitx3	ENSMUST00000056732.3|Mfap1b|ENSMUSG00000048222.3|microfibrillar-associated protein 1B
mm10_v2_chr12_+_70974621_70974686	0.578756	Pitx3	ENSMUST00000160027.1|Psma3|ENSMUSG00000060073.3|proteasome (prosome, macropain) subunit, alpha type 3 	ENSMUST00000160864.1|Psma3|ENSMUSG00000060073.3|proteasome (prosome, macropain) subunit, alpha type 3
mm10_v2_chr8_+_11477921_11477953	0.573872	Pitx3	ENSMUST00000180408.1|E230013L22Rik|ENSMUSG00000096957.1|RIKEN cDNA E230013L22 gene
mm10_v2_chr11_+_53720790_53720795	0.572136	Pitx3	ENSMUST00000048605.2|Il5|ENSMUSG00000036117.2|interleukin 5
mm10_v2_chr17_+_34647128_34647180	0.570942	Pitx3	ENSMUST00000015605.8|Atf6b|ENSMUSG00000015461.9|activating transcription factor 6 beta 	ENSMUST00000182587.1|Atf6b|ENSMUSG00000015461.9|activating transcription factor 6 beta
mm10_v2_chr7_-_121981669_121981711	0.570685	Pitx3	ENSMUST00000057576.7|Cog7|ENSMUSG00000034951.9|component of oligomeric golgi complex 7
mm10_v2_chr13_-_53377355_53377373	0.569909	Pitx3	ENSMUST00000021920.6|Sptlc1|ENSMUSG00000021468.7|serine palmitoyltransferase, long chain base subunit 1
mm10_v2_chr1_+_60908993_60909033	0.56979	Pitx3	ENSMUST00000027164.2|Ctla4|ENSMUSG00000026011.7|cytotoxic T-lymphocyte-associated protein 4
mm10_v2_chr1_-_74305607_74305622	0.569517	Pitx3	ENSMUST00000130763.1|Tmbim1|ENSMUSG00000006301.11|transmembrane BAX inhibitor motif containing 1
mm10_v2_chr1_-_119648903_119649000	0.56121	Pitx3	ENSMUST00000163147.1|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5 	ENSMUST00000052404.6|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5 	ENSMUST00000027632.7|Epb4.1l5|ENSMUSG00000026383.8|erythrocyte protein band 4.1-like 5
mm10_v2_chrY_-_84629416_84629416	0.558271	Pitx3	ENSMUST00000179495.1|Gm21824|ENSMUSG00000096671.1|predicted gene, 21824
mm10_v2_chr7_-_127014585_127014621	0.55534	Pitx3	ENSMUST00000165096.2|Mvp|ENSMUSG00000030681.12|major vault protein
mm10_v2_chr1_+_58802492_58802517	0.554826	Pitx3	ENSMUST00000165549.1|Casp8|ENSMUSG00000026029.8|caspase 8
mm10_v2_chr6_+_86438666_86438713	0.553536	Pitx3	ENSMUST00000113700.1|C87436|ENSMUSG00000046679.10|expressed sequence C87436
mm10_v2_chr1_-_134549663_134549687	0.553382	Pitx3	ENSMUST00000172898.1|4931440L10Rik|ENSMUSG00000046367.9|RIKEN cDNA 4931440L10 gene
mm10_v2_chrY_-_81869220_81869220	0.551716	Pitx3	ENSMUST00000179012.1|Gm21919|ENSMUSG00000094047.1|predicted gene, 21919
mm10_v2_chrY_+_37818134_37818134	0.551145	Pitx3	ENSMUST00000179746.1|Gm21878|ENSMUSG00000094835.1|predicted gene, 21878
mm10_v2_chrY_-_71364937_71364937	0.551145	Pitx3	ENSMUST00000177885.1|Gm21841|ENSMUSG00000094961.1|predicted gene, 21841
mm10_v2_chrY_-_83994275_83994275	0.551144	Pitx3	ENSMUST00000177980.1|Gm21717|ENSMUSG00000095109.1|predicted gene, 21717
mm10_v2_chrY_+_35503137_35503137	0.551144	Pitx3	ENSMUST00000180125.1|Gm21795|ENSMUSG00000096315.1|predicted gene, 21795
mm10_v2_chrY_+_36025254_36025254	0.550055	Pitx3	ENSMUST00000178190.1|Gm21898|ENSMUSG00000093845.1|predicted gene, 21898
mm10_v2_chrY_+_23802239_23802239	0.550055	Pitx3	ENSMUST00000180287.1|Gm21768|ENSMUSG00000094617.1|predicted gene, 21768
mm10_v2_chrY_-_73383907_73383907	0.550055	Pitx3	ENSMUST00000180192.1|Gm21855|ENSMUSG00000096643.1|predicted gene, 21855
mm10_v2_chrY_-_72450406_72450406	0.550055	Pitx3	ENSMUST00000179653.1|Gm21757|ENSMUSG00000095904.1|predicted gene, 21757
mm10_v2_chrY_-_86500240_86500240	0.550055	Pitx3	ENSMUST00000179810.1|Gm21796|ENSMUSG00000095303.1|predicted gene, 21796
mm10_v2_chrY_+_23240330_23240330	0.550054	Pitx3	ENSMUST00000178468.1|Gm21907|ENSMUSG00000096443.1|predicted gene, 21907
mm10_v2_chr13_+_97482701_97482759	0.549975	Pitx3	ENSMUST00000179324.1|Gm2373|ENSMUSG00000078952.3|predicted gene 2373
mm10_v2_chrY_-_52675541_52675541	0.549415	Pitx3	ENSMUST00000178917.1|Gm21840|ENSMUSG00000096060.1|predicted gene, 21840
mm10_v2_chrY_-_65273203_65273203	0.549415	Pitx3	ENSMUST00000177863.1|Gm21848|ENSMUSG00000096783.1|predicted gene, 21848
mm10_v2_chr19_-_45591820_45591878	0.54778	Pitx3	ENSMUST00000160003.1|Fbxw4|ENSMUSG00000040913.4|F-box and WD-40 domain protein 4 	ENSMUST00000162879.1|Fbxw4|ENSMUSG00000040913.4|F-box and WD-40 domain protein 4
mm10_v2_chr7_-_30169701_30169766	0.547589	Pitx3	ENSMUST00000062181.7|Zfp146|ENSMUSG00000037029.7|zinc finger protein 146
mm10_v2_chr2_+_32757234_32757319	0.547358	Pitx3	ENSMUST00000009707.7|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A 	ENSMUST00000177382.1|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A 	ENSMUST00000140999.1|Tor2a|ENSMUSG00000009563.10|torsin family 2, member A
mm10_v2_chr10_-_81600857_81600900	0.547227	Pitx3	ENSMUST00000151858.1|Tle6|ENSMUSG00000034758.6|transducin-like enhancer of split 6, homolog of Drosophila E(spl) 	ENSMUST00000142948.1|Tle6|ENSMUSG00000034758.6|transducin-like enhancer of split 6, homolog of Drosophila E(spl) 	ENSMUST00000072020.2|Tle6|ENSMUSG00000034758.6|transducin-like enhancer of split 6, homolog of Drosophila E(spl)
mm10_v2_chrY_-_10534428_10534428	0.546782	Pitx3	ENSMUST00000179665.1|Gm20737|ENSMUSG00000095950.1|predicted gene, 20737
mm10_v2_chrY_+_18090734_18090734	0.546773	Pitx3	ENSMUST00000180056.1|Ssty1|ENSMUSG00000095267.1|spermiogenesis specific transcript on the Y 1
mm10_v2_chrY_+_21096898_21096898	0.546773	Pitx3	ENSMUST00000180223.1|Gm20910|ENSMUSG00000095775.1|predicted gene, 20910
mm10_v2_chrY_-_41376429_41376429	0.546754	Pitx3	ENSMUST00000178470.1|Gm20827|ENSMUSG00000094100.1|predicted gene, 20827
mm10_v2_chrY_+_18208481_18208481	0.546658	Pitx3	ENSMUST00000177902.1|Gm20851|ENSMUSG00000095050.1|predicted gene, 20851
mm10_v2_chrY_-_73035139_73035139	0.544368	Pitx3	ENSMUST00000178334.1|Gm21766|ENSMUSG00000095173.1|predicted gene, 21766
mm10_v2_chrY_-_8069993_8069993	0.543967	Pitx3	ENSMUST00000178396.1|Gm20825|ENSMUSG00000095324.1|predicted gene, 20825
mm10_v2_chr5_+_25516061_25516102	0.543393	Pitx3	ENSMUST00000045016.7|Cct8l1|ENSMUSG00000038044.7|chaperonin containing TCP1, subunit 8 (theta)-like 1
mm10_v2_chr9_-_22307638_22307694	0.541589	Pitx3	ENSMUST00000086278.6|Zfp810|ENSMUSG00000066829.6|zinc finger protein 810
mm10_v2_chr14_+_52279132_52279188	0.540713	Pitx3	ENSMUST00000022766.6|Tox4|ENSMUSG00000016831.11|TOX high mobility group box family member 4
mm10_v2_chr4_+_19575139_19575216	0.532574	Pitx3	ENSMUST00000108253.1|Rmdn1|ENSMUSG00000028229.5|regulator of microtubule dynamics 1 	ENSMUST00000029888.3|Rmdn1|ENSMUSG00000028229.5|regulator of microtubule dynamics 1
mm10_v2_chr7_-_127122226_127122226	0.527963	Pitx3	ENSMUST00000032912.5|Qprt|ENSMUSG00000030674.5|quinolinate phosphoribosyltransferase
mm10_v2_chr11_+_4902212_4902247	0.527853	Pitx3	ENSMUST00000142543.1|Thoc5|ENSMUSG00000034274.5|THO complex 5
mm10_v2_chr18_+_40256960_40257018	0.525764	Pitx3	ENSMUST00000096572.1|2900055J20Rik|ENSMUSG00000071860.1|RIKEN cDNA 2900055J20 gene
mm10_v2_chr6_+_86438714_86438727	0.522346	Pitx3	ENSMUST00000113698.1|C87436|ENSMUSG00000046679.10|expressed sequence C87436
mm10_v2_chr14_+_54360826_54360851	0.520149	Pitx3	ENSMUST00000000985.5|Oxa1l|ENSMUSG00000000959.5|oxidase assembly 1-like
mm10_v2_chr17_-_53539411_53539459	0.517928	Pitx3	ENSMUST00000056198.3|Pp2d1|ENSMUSG00000044957.3|protein phosphatase 2C-like domain containing 1
mm10_v2_chr5_-_143138200_143138200	0.511144	Pitx3	ENSMUST00000164536.2|Olfr718-ps1|ENSMUSG00000090981.2|olfactory receptor 718, pseudogene 1
mm10_v2_chrY_-_85168797_85168797	0.51068	Pitx3	ENSMUST00000177830.1|Gm20856|ENSMUSG00000093832.1|predicted gene, 20856
mm10_v2_chrY_+_2830680_2830699	0.509324	Pitx3	ENSMUST00000100360.3|Rbmy|ENSMUSG00000094658.1|RNA binding motif protein, Y chromosome 	ENSMUST00000171534.1|Rbmy|ENSMUSG00000094658.1|RNA binding motif protein, Y chromosome 	ENSMUST00000179404.1|Gm10256|ENSMUSG00000095852.1|predicted gene 10256
mm10_v2_chr5_-_138994935_138995037	0.506878	Pitx3	ENSMUST00000046901.7|Pdgfa|ENSMUSG00000025856.9|platelet derived growth factor, alpha 	ENSMUST00000076095.7|Pdgfa|ENSMUSG00000025856.9|platelet derived growth factor, alpha
mm10_v2_chr4_+_49632046_49632110	0.505631	Pitx3	ENSMUST00000156314.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000167496.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000029989.4|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000146547.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20
mm10_v2_chr4_-_140323302_140323302	0.504329	Pitx3	ENSMUST00000063789.2|Gm9867|ENSMUSG00000052098.2|predicted gene 9867
mm10_v2_chr7_+_22412231_22412231	0.503282	Pitx3	ENSMUST00000177774.1|Vmn1r148|ENSMUSG00000095543.1|vomeronasal 1 receptor 148
mm10_v2_chr9_+_106499967_106499972	0.503066	Pitx3	ENSMUST00000164965.1|Iqcf1|ENSMUSG00000066383.5|IQ motif containing F1 	ENSMUST00000085114.5|Iqcf1|ENSMUSG00000066383.5|IQ motif containing F1
mm10_v2_chr11_+_101155884_101155921	0.501879	Pitx3	ENSMUST00000043654.9|Tubg2|ENSMUSG00000045007.9|tubulin, gamma 2
mm10_v2_chr4_+_74242468_74242497	0.501702	Pitx3	ENSMUST00000077851.3|Kdm4c|ENSMUSG00000028397.7|lysine (K)-specific demethylase 4C
mm10_v2_chrX_-_37104523_37104528	0.500964	Pitx3	ENSMUST00000130324.1|Upf3b|ENSMUSG00000036572.10|UPF3 regulator of nonsense transcripts homolog B (yeast)
mm10_v2_chr17_+_25727726_25727797	0.49895	Pitx3	ENSMUST00000047273.1|Rpusd1|ENSMUSG00000041199.2|RNA pseudouridylate synthase domain containing 1
mm10_v2_chr4_-_144280466_144280466	0.498568	Pitx3	ENSMUST00000035757.6|Pramel5|ENSMUSG00000036749.9|preferentially expressed antigen in melanoma like 5
mm10_v2_chr12_+_87792580_87792580	0.498414	Pitx3	ENSMUST00000181313.1|Gm21936|ENSMUSG00000097581.1|predicted gene, 21936
mm10_v2_chr14_-_55524191_55524223	0.498288	Pitx3	ENSMUST00000111404.1|Nrl|ENSMUSG00000040632.9|neural retina leucine zipper gene
mm10_v2_chr3_-_140839637_140839637	0.497402	Pitx3	ENSMUST00000178845.1|Gm6214|ENSMUSG00000095465.1|predicted gene 6214
mm10_v2_chr10_-_62362265_62362313	0.493863	Pitx3	ENSMUST00000149534.1|Hk1|ENSMUSG00000037012.12|hexokinase 1
mm10_v2_chr6_+_29859662_29859685	0.492841	Pitx3	ENSMUST00000128927.2|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr13_-_120215213_120215213	0.492703	Pitx3	ENSMUST00000177561.1|Gm21762|ENSMUSG00000094027.1|predicted gene, 21762
mm10_v2_chr1_-_133701881_133701881	0.492603	Pitx3	ENSMUST00000167348.1|Gm17678|ENSMUSG00000091176.1|predicted gene, 17678
mm10_v2_chr14_+_121878591_121878728	0.491753	Pitx3	ENSMUST00000039803.5|Ubac2|ENSMUSG00000041765.5|ubiquitin associated domain containing 2
mm10_v2_chr7_-_66388286_66388350	0.485872	Pitx3	ENSMUST00000015277.7|Lrrk1|ENSMUSG00000015133.10|leucine-rich repeat kinase 1
mm10_v2_chr7_+_18987518_18987524	0.485436	Pitx3	ENSMUST00000063563.7|Nanos2|ENSMUSG00000051965.7|nanos homolog 2 (Drosophila)
mm10_v2_chr19_-_38819156_38819242	0.482938	Pitx3	ENSMUST00000025963.7|Noc3l|ENSMUSG00000024999.7|nucleolar complex associated 3 homolog (S. cerevisiae)
mm10_v2_chrY_-_88953082_88953082	0.480744	Pitx3	ENSMUST00000179463.1|Gm21720|ENSMUSG00000095800.1|predicted gene, 21720
mm10_v2_chr2_-_73214323_73214333	0.477382	Pitx3	ENSMUST00000100015.4|Ola1|ENSMUSG00000027108.9|Obg-like ATPase 1
mm10_v2_chr2_-_118762607_118762666	0.472147	Pitx3	ENSMUST00000059997.8|A430105I19Rik|ENSMUSG00000045838.8|RIKEN cDNA A430105I19 gene
mm10_v2_chr6_+_83349446_83349496	0.470103	Pitx3	ENSMUST00000136501.1|Bola3|ENSMUSG00000045160.8|bolA-like 3 (E. coli)
mm10_v2_chrX_-_7907835_7907835	0.469642	Pitx3	ENSMUST00000085330.4|Gm10491|ENSMUSG00000073291.3|predicted gene 10491
mm10_v2_chrY_-_53782226_53782226	0.46801	Pitx3	ENSMUST00000179249.1|Gm21749|ENSMUSG00000094106.1|predicted gene, 21749
mm10_v2_chr11_-_50431101_50431131	0.467455	Pitx3	ENSMUST00000020643.3|Rufy1|ENSMUSG00000020375.3|RUN and FYVE domain containing 1
mm10_v2_chr8_-_126971062_126971079	0.467339	Pitx3	ENSMUST00000045994.6|Rbm34|ENSMUSG00000033931.8|RNA binding motif protein 34
mm10_v2_chr4_+_3656508_3656518	0.466902	Pitx3	ENSMUST00000139600.1|2210414B05Rik|ENSMUSG00000085394.1|RIKEN cDNA 2210414B05 gene
mm10_v2_chr17_+_28313513_28313644	0.466513	Pitx3	ENSMUST00000114803.1|Fance|ENSMUSG00000007570.9|Fanconi anemia, complementation group E 	ENSMUST00000114801.1|Fance|ENSMUSG00000007570.9|Fanconi anemia, complementation group E 	ENSMUST00000114804.3|Fance|ENSMUSG00000007570.9|Fanconi anemia, complementation group E 	ENSMUST00000088007.4|Fance|ENSMUSG00000007570.9|Fanconi anemia, complementation group E
mm10_v2_chr8_+_122376609_122376652	0.465016	Pitx3	ENSMUST00000017622.5|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18 	ENSMUST00000093073.5|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18 	ENSMUST00000176699.1|Zc3h18|ENSMUSG00000017478.9|zinc finger CCCH-type containing 18
mm10_v2_chr10_+_51677756_51677789	0.461856	Pitx3	ENSMUST00000122922.1|Rfx6|ENSMUSG00000019900.11|regulatory factor X, 6
mm10_v2_chr17_+_24023859_24023859	0.46001	Pitx3	ENSMUST00000178572.1|Gm5225|ENSMUSG00000095266.1|predicted gene 5225
mm10_v2_chr5_-_92253159_92253159	0.456646	Pitx3	ENSMUST00000031359.8|Ppef2|ENSMUSG00000029410.8|protein phosphatase, EF hand calcium-binding domain 2
mm10_v2_chr18_+_32240300_32240342	0.454467	Pitx3	ENSMUST00000025241.6|Ercc3|ENSMUSG00000024382.7|excision repair cross-complementing rodent repair deficiency, complementation group 3
mm10_v2_chr7_-_64374071_64374109	0.451112	Pitx3	ENSMUST00000163289.1|Fan1|ENSMUSG00000033458.11|FANCD2/FANCI-associated nuclease 1
mm10_v2_chr3_+_95526777_95526797	0.4503	Pitx3	ENSMUST00000015667.2|Ctss|ENSMUSG00000038642.4|cathepsin S 	ENSMUST00000116304.2|Ctss|ENSMUSG00000038642.4|cathepsin S
mm10_v2_chr17_+_47385386_47385404	0.450102	Pitx3	ENSMUST00000024774.7|Guca1b|ENSMUSG00000023979.8|guanylate cyclase activator 1B 	ENSMUST00000145462.1|Guca1b|ENSMUSG00000023979.8|guanylate cyclase activator 1B
mm10_v2_chr12_-_85280306_85280347	0.447842	Pitx3	ENSMUST00000117138.2|Acyp1|ENSMUSG00000008822.9|acylphosphatase 1, erythrocyte (common) type
mm10_v2_chr6_+_104493220_104493248	0.44377	Pitx3	ENSMUST00000162872.1|Cntn6|ENSMUSG00000030092.8|contactin 6
mm10_v2_chr9_-_114317028_114317028	0.44329	Pitx3	ENSMUST00000072612.5|4921528I07Rik|ENSMUSG00000064299.5|RIKEN cDNA 4921528I07 gene
mm10_v2_chrY_-_88261004_88261004	0.439155	Pitx3	ENSMUST00000177900.1|Gm21777|ENSMUSG00000094459.1|predicted gene, 21777
mm10_v2_chrY_-_81352055_81352055	0.43864	Pitx3	ENSMUST00000179831.1|Gm21829|ENSMUSG00000095750.1|predicted gene, 21829
mm10_v2_chrY_-_53192562_53192562	0.437637	Pitx3	ENSMUST00000179650.1|Gm21902|ENSMUSG00000096026.1|predicted gene, 21902
mm10_v2_chr15_+_81400132_81400215	0.436769	Pitx3	ENSMUST00000163754.1|Xpnpep3|ENSMUSG00000022401.5|X-prolyl aminopeptidase (aminopeptidase P) 3, putative 	ENSMUST00000041609.4|Xpnpep3|ENSMUSG00000022401.5|X-prolyl aminopeptidase (aminopeptidase P) 3, putative
mm10_v2_chr1_+_85793411_85793541	0.436236	Pitx3	ENSMUST00000113360.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39 	ENSMUST00000126962.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39
mm10_v2_chrY_+_40682046_40682046	0.436106	Pitx3	ENSMUST00000178175.1|Gm20793|ENSMUSG00000095784.1|predicted gene, 20793
mm10_v2_chrY_+_40806531_40806531	0.436046	Pitx3	ENSMUST00000178528.1|Gm20795|ENSMUSG00000095452.1|predicted gene, 20795
mm10_v2_chrY_-_18623762_18623762	0.436046	Pitx3	ENSMUST00000178373.1|Gm21660|ENSMUSG00000094046.1|predicted gene, 21660
mm10_v2_chrY_-_13911041_13911041	0.436046	Pitx3	ENSMUST00000179339.1|Gm20836|ENSMUSG00000094492.1|predicted gene, 20836
mm10_v2_chr7_-_80324418_80324458	0.435963	Pitx3	ENSMUST00000047362.4|Rccd1|ENSMUSG00000038930.5|RCC1 domain containing 1 	ENSMUST00000121882.1|Rccd1|ENSMUSG00000038930.5|RCC1 domain containing 1
mm10_v2_chr19_-_5349574_5349574	0.43562	Pitx3	ENSMUST00000025764.5|Cst6|ENSMUSG00000024846.5|cystatin E/M
mm10_v2_chr19_-_4139605_4139613	0.435246	Pitx3	ENSMUST00000025761.6|Cabp4|ENSMUSG00000024842.7|calcium binding protein 4
mm10_v2_chr3_-_96197580_96197634	0.434761	Pitx3	ENSMUST00000016087.3|Bola1|ENSMUSG00000015943.5|bolA-like 1 (E. coli)
mm10_v2_chr17_-_35673738_35673750	0.434553	Pitx3	ENSMUST00000001565.8|Gtf2h4|ENSMUSG00000001524.8|general transcription factor II H, polypeptide 4
mm10_v2_chrY_-_80823474_80823474	0.434146	Pitx3	ENSMUST00000179527.1|Gm21722|ENSMUSG00000096778.1|predicted gene, 21722
mm10_v2_chrY_-_67406430_67406430	0.434146	Pitx3	ENSMUST00000180330.1|Gm21794|ENSMUSG00000094056.1|predicted gene, 21794
mm10_v2_chrY_-_80023149_80023149	0.434146	Pitx3	ENSMUST00000179289.1|Gm21873|ENSMUSG00000095084.1|predicted gene, 21873
mm10_v2_chrY_-_78102221_78102221	0.434146	Pitx3	ENSMUST00000177823.1|Gm21198|ENSMUSG00000094045.1|predicted gene, 21198
mm10_v2_chrY_-_87013484_87013484	0.433003	Pitx3	ENSMUST00000180012.1|Gm21752|ENSMUSG00000094716.1|predicted gene, 21752
mm10_v2_chrX_-_140956675_140956728	0.432873	Pitx3	ENSMUST00000033805.8|Psmd10|ENSMUSG00000031429.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENSMUST00000112978.1|Psmd10|ENSMUSG00000031429.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
mm10_v2_chrY_-_65790271_65790271	0.432281	Pitx3	ENSMUST00000178560.1|Gm21895|ENSMUSG00000096251.1|predicted gene, 21895
mm10_v2_chrY_-_85235394_85235394	0.432281	Pitx3	ENSMUST00000178032.1|Gm21734|ENSMUSG00000096575.1|predicted gene, 21734
mm10_v2_chr11_+_87699897_87699897	0.430867	Pitx3	ENSMUST00000040089.4|Rnf43|ENSMUSG00000034177.9|ring finger protein 43
mm10_v2_chr17_-_48038286_48038306	0.428426	Pitx3	ENSMUST00000178823.1|1700122O11Rik|ENSMUSG00000094928.1|RIKEN cDNA 1700122O11 gene
mm10_v2_chr11_+_58867230_58867275	0.425298	Pitx3	ENSMUST00000132570.1|2810021J22Rik|ENSMUSG00000020491.9|RIKEN cDNA 2810021J22 gene
mm10_v2_chr2_+_83967313_83967313	0.423339	Pitx3	ENSMUST00000099951.2|Gm13695|ENSMUSG00000096729.1|predicted gene 13695
mm10_v2_chr9_+_18409094_18409094	0.421658	Pitx3	ENSMUST00000098973.2|Ubtfl1|ENSMUSG00000074502.3|upstream binding transcription factor, RNA polymerase I-like 1
mm10_v2_chr2_-_25627960_25628030	0.420971	Pitx3	ENSMUST00000028307.8|Fcna|ENSMUSG00000026938.10|ficolin A
mm10_v2_chr10_-_92722356_92722420	0.420331	Pitx3	ENSMUST00000020163.6|Nedd1|ENSMUSG00000019988.6|neural precursor cell expressed, developmentally down-regulated gene 1
mm10_v2_chr8_-_111992258_111992302	0.418415	Pitx3	ENSMUST00000034427.5|Adat1|ENSMUSG00000031949.11|adenosine deaminase, tRNA-specific 1 	ENSMUST00000139820.1|Adat1|ENSMUSG00000031949.11|adenosine deaminase, tRNA-specific 1
mm10_v2_chr17_+_34647187_34647216	0.415292	Pitx3	ENSMUST00000173984.1|Atf6b|ENSMUSG00000015461.9|activating transcription factor 6 beta
mm10_v2_chr2_+_83973123_83973123	0.41413	Pitx3	ENSMUST00000180347.1|Gm13696|ENSMUSG00000096484.1|predicted gene 13696
mm10_v2_chr2_+_83961503_83961503	0.41413	Pitx3	ENSMUST00000178960.1|Gm13693|ENSMUSG00000094336.1|predicted gene 13693
mm10_v2_chr2_+_83984743_83984743	0.41413	Pitx3	ENSMUST00000099948.2|Gm13697|ENSMUSG00000095824.1|predicted gene 13697
mm10_v2_chr2_+_83990553_83990553	0.41413	Pitx3	ENSMUST00000099947.2|Gm13691|ENSMUSG00000079247.2|predicted gene 13691
mm10_v2_chr2_+_83978933_83978933	0.41413	Pitx3	ENSMUST00000178533.1|Gm13694|ENSMUSG00000096337.1|predicted gene 13694
mm10_v2_chr17_-_57041647_57041662	0.413099	Pitx3	ENSMUST00000169012.1|Slc25a41|ENSMUSG00000011486.8|solute carrier family 25, member 41 	ENSMUST00000058661.7|Slc25a41|ENSMUSG00000011486.8|solute carrier family 25, member 41
mm10_v2_chr11_+_54866374_54866392	0.411903	Pitx3	ENSMUST00000020504.5|Hint1|ENSMUSG00000020267.6|histidine triad nucleotide binding protein 1
mm10_v2_chr3_-_113630068_113630149	0.410425	Pitx3	ENSMUST00000092154.3|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3 	ENSMUST00000106536.1|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3 	ENSMUST00000106535.1|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3
mm10_v2_chr14_-_52279238_52279339	0.403533	Pitx3	ENSMUST00000167116.1|Rab2b|ENSMUSG00000022159.10|RAB2B, member RAS oncogene family 	ENSMUST00000100631.4|Rab2b|ENSMUSG00000022159.10|RAB2B, member RAS oncogene family
mm10_v2_chr19_+_6184363_6184467	0.399231	Pitx3	ENSMUST00000025699.2|1700123I01Rik|ENSMUSG00000024786.3|RIKEN cDNA 1700123I01 gene 	ENSMUST00000113528.1|1700123I01Rik|ENSMUSG00000024786.3|RIKEN cDNA 1700123I01 gene
mm10_v2_chr3_+_98160812_98160812	0.397577	Pitx3	ENSMUST00000050342.3|Adam30|ENSMUSG00000043468.3|a disintegrin and metallopeptidase domain 30
mm10_v2_chr4_+_126677630_126677646	0.397478	Pitx3	ENSMUST00000030642.2|Psmb2|ENSMUSG00000028837.2|proteasome (prosome, macropain) subunit, beta type 2
mm10_v2_chr10_-_79746553_79746586	0.393859	Pitx3	ENSMUST00000020580.6|Polrmt|ENSMUSG00000020329.6|polymerase (RNA) mitochondrial (DNA directed) 	ENSMUST00000159016.1|Polrmt|ENSMUSG00000020329.6|polymerase (RNA) mitochondrial (DNA directed)
mm10_v2_chr15_+_76380492_76380553	0.393622	Pitx3	ENSMUST00000096385.4|Mroh1|ENSMUSG00000022558.9|maestro heat-like repeat family member 1 	ENSMUST00000160728.1|Mroh1|ENSMUSG00000022558.9|maestro heat-like repeat family member 1 	ENSMUST00000162319.1|Mroh1|ENSMUSG00000022558.9|maestro heat-like repeat family member 1
mm10_v2_chr4_+_155704789_155704834	0.391369	Pitx3	ENSMUST00000030905.2|Ssu72|ENSMUSG00000029038.3|Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)
mm10_v2_chr8_-_111031712_111031751	0.383954	Pitx3	ENSMUST00000065784.5|Ddx19b|ENSMUSG00000033658.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
mm10_v2_chr19_+_6226378_6226388	0.380274	Pitx3	ENSMUST00000025698.7|Gpha2|ENSMUSG00000024784.7|glycoprotein hormone alpha 2 	ENSMUST00000113526.1|Gpha2|ENSMUSG00000024784.7|glycoprotein hormone alpha 2
mm10_v2_chr2_-_26294550_26294561	0.379481	Pitx3	ENSMUST00000057224.3|4932418E24Rik|ENSMUSG00000048038.6|RIKEN cDNA 4932418E24 gene
mm10_v2_chr13_+_58281183_58281196	0.378834	Pitx3	ENSMUST00000180882.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555 	ENSMUST00000180452.1|Gm26555|ENSMUSG00000097399.1|predicted gene, 26555
mm10_v2_chr7_+_24081888_24081948	0.378485	Pitx3	ENSMUST00000068975.3|Zfp180|ENSMUSG00000057101.6|zinc finger protein 180
mm10_v2_chr11_+_105178765_105178807	0.377893	Pitx3	ENSMUST00000106939.2|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis)
mm10_v2_chrX_-_53643717_53643769	0.377111	Pitx3	ENSMUST00000088779.3|Cxx1a|ENSMUSG00000067925.3|CAAX box 1A
mm10_v2_chr1_-_153808163_153808168	0.371683	Pitx3	ENSMUST00000141249.1|Rgsl1|ENSMUSG00000042641.12|regulator of G-protein signaling like 1
mm10_v2_chr14_+_7817957_7817994	0.369245	Pitx3	ENSMUST00000052678.8|Flnb|ENSMUSG00000025278.8|filamin, beta
mm10_v2_chr19_+_3935186_3935247	0.369035	Pitx3	ENSMUST00000162708.1|Unc93b1|ENSMUSG00000036908.10|unc-93 homolog B1 (C. elegans) 	ENSMUST00000165711.1|Unc93b1|ENSMUSG00000036908.10|unc-93 homolog B1 (C. elegans)
mm10_v2_chr8_-_116993459_116993538	0.367962	Pitx3	ENSMUST00000040484.5|Gcsh|ENSMUSG00000034424.5|glycine cleavage system protein H (aminomethyl carrier)
mm10_v2_chr1_-_58586191_58586323	0.367521	Pitx3	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr19_+_6061176_6061235	0.366292	Pitx3	ENSMUST00000162726.3|Znhit2|ENSMUSG00000075227.5|zinc finger, HIT domain containing 2
mm10_v2_chr4_+_125029992_125030070	0.362965	Pitx3	ENSMUST00000030684.7|Gnl2|ENSMUSG00000028869.7|guanine nucleotide binding protein-like 2 (nucleolar)
mm10_v2_chr4_-_144786551_144786583	0.362272	Pitx3	ENSMUST00000105746.2|Gm438|ENSMUSG00000078504.2|predicted gene 438
mm10_v2_chr12_-_85280361_85280435	0.3603	Pitx3	ENSMUST00000065913.7|Acyp1|ENSMUSG00000008822.9|acylphosphatase 1, erythrocyte (common) type 	ENSMUST00000008966.6|Acyp1|ENSMUSG00000008822.9|acylphosphatase 1, erythrocyte (common) type
mm10_v2_chr5_-_114858682_114858682	0.359638	Pitx3	ENSMUST00000066959.4|Gm9936|ENSMUSG00000054123.4|predicted gene 9936
mm10_v2_chr3_+_67892189_67892226	0.356297	Pitx3	ENSMUST00000063263.3|Iqcj|ENSMUSG00000051777.4|IQ motif containing J
mm10_v2_chr8_-_46124146_46124146	0.3558	Pitx3	ENSMUST00000170416.1|Snx25|ENSMUSG00000038291.10|sorting nexin 25
mm10_v2_chr1_+_169928648_169928648	0.354221	Pitx3	ENSMUST00000094348.3|1700084C01Rik|ENSMUSG00000070532.4|RIKEN cDNA 1700084C01 gene
mm10_v2_chr5_+_100798627_100798770	0.351022	Pitx3	ENSMUST00000016977.8|Mrps18c|ENSMUSG00000016833.8|mitochondrial ribosomal protein S18C 	ENSMUST00000112898.1|Mrps18c|ENSMUSG00000016833.8|mitochondrial ribosomal protein S18C 	ENSMUST00000112901.1|Mrps18c|ENSMUSG00000016833.8|mitochondrial ribosomal protein S18C
mm10_v2_chr6_+_29859686_29859710	0.349305	Pitx3	ENSMUST00000134438.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chrY_+_38247727_38247727	0.347198	Pitx3	ENSMUST00000178740.1|Gm21735|ENSMUSG00000096471.1|predicted gene, 21735
mm10_v2_chr4_-_106617232_106617240	0.345163	Pitx3	ENSMUST00000106788.1|BC055111|ENSMUSG00000054362.3|cDNA sequence BC055111
mm10_v2_chr1_-_153844130_153844158	0.33637	Pitx3	ENSMUST00000124558.3|Rgsl1|ENSMUSG00000042641.12|regulator of G-protein signaling like 1
mm10_v2_chr11_+_72314438_72314455	0.33505	Pitx3	ENSMUST00000108504.1|Fbxo39|ENSMUSG00000070388.3|F-box protein 39
mm10_v2_chrY_+_23097865_23097865	0.335042	Pitx3	ENSMUST00000179975.1|Gm21661|ENSMUSG00000095237.1|predicted gene, 21661
mm10_v2_chr7_+_45513718_45513747	0.331033	Pitx3	ENSMUST00000024233.6|Tulp2|ENSMUSG00000023467.10|tubby-like protein 2
mm10_v2_chr9_+_88581036_88581036	0.330302	Pitx3	ENSMUST00000164661.2|Trim43a|ENSMUSG00000090693.2|tripartite motif-containing 43A
mm10_v2_chr13_+_108046411_108046424	0.325252	Pitx3	ENSMUST00000095458.4|Smim15|ENSMUSG00000071180.4|small integral membrane protein 15
mm10_v2_chrY_-_82020055_82020055	0.324647	Pitx3	ENSMUST00000177769.1|Gm21790|ENSMUSG00000096104.1|predicted gene, 21790
mm10_v2_chr11_+_116848901_116848901	0.324409	Pitx3	ENSMUST00000143184.1|Mettl23|ENSMUSG00000090266.4|methyltransferase like 23
mm10_v2_chr14_+_69190638_69190691	0.322181	Pitx3	ENSMUST00000022646.8|Nkx3-1|ENSMUSG00000022061.8|NK-3 transcription factor, locus 1 (Drosophila)
mm10_v2_chr3_-_108889706_108889808	0.321101	Pitx3	ENSMUST00000180063.1|Fndc7|ENSMUSG00000045326.7|fibronectin type III domain containing 7
mm10_v2_chr10_+_81661998_81661998	0.319834	Pitx3	ENSMUST00000105315.2|Gm10778|ENSMUSG00000096856.1|predicted gene 10778
mm10_v2_chr7_-_46667303_46667343	0.318446	Pitx3	ENSMUST00000168335.1|Tph1|ENSMUSG00000040046.7|tryptophan hydroxylase 1
mm10_v2_chr17_+_35089229_35089307	0.318305	Pitx3	ENSMUST00000007251.7|Abhd16a|ENSMUSG00000007036.9|abhydrolase domain containing 16A
mm10_v2_chr17_+_56673225_56673287	0.317331	Pitx3	ENSMUST00000002445.8|Ranbp3|ENSMUSG00000002372.8|RAN binding protein 3
mm10_v2_chr11_+_58867204_58867229	0.317199	Pitx3	ENSMUST00000073924.3|2810021J22Rik|ENSMUSG00000020491.9|RIKEN cDNA 2810021J22 gene
mm10_v2_chr8_-_31739763_31739763	0.316702	Pitx3	ENSMUST00000178878.1|Gm5117|ENSMUSG00000093862.1|predicted gene 5117
mm10_v2_chr8_-_105979413_105979444	0.315778	Pitx3	ENSMUST00000034371.7|Dpep3|ENSMUSG00000031898.8|dipeptidase 3
mm10_v2_chr11_+_4267095_4267095	0.315148	Pitx3	ENSMUST00000040750.3|Lif|ENSMUSG00000034394.8|leukemia inhibitory factor
mm10_v2_chr4_-_56741423_56741435	0.312222	Pitx3	ENSMUST00000095080.3|Actl7b|ENSMUSG00000070980.3|actin-like 7b
mm10_v2_chr6_+_104492790_104492965	0.31043	Pitx3	ENSMUST00000161446.1|Cntn6|ENSMUSG00000030092.8|contactin 6 	ENSMUST00000161070.1|Cntn6|ENSMUSG00000030092.8|contactin 6 	ENSMUST00000089215.5|Cntn6|ENSMUSG00000030092.8|contactin 6
mm10_v2_chr3_-_108889990_108890031	0.309194	Pitx3	ENSMUST00000053065.4|Fndc7|ENSMUSG00000045326.7|fibronectin type III domain containing 7 	ENSMUST00000102620.3|Fndc7|ENSMUSG00000045326.7|fibronectin type III domain containing 7
mm10_v2_chr10_+_82812123_82812209	0.308873	Pitx3	ENSMUST00000178540.1|1700028I16Rik|ENSMUSG00000056821.7|RIKEN cDNA 1700028I16 gene 	ENSMUST00000076984.6|1700028I16Rik|ENSMUSG00000056821.7|RIKEN cDNA 1700028I16 gene
mm10_v2_chrX_-_150459128_150459157	0.305011	Pitx3	ENSMUST00000173996.1|Tmem29|ENSMUSG00000041353.6|transmembrane protein 29
mm10_v2_chr7_+_118597295_118597342	0.304546	Pitx3	ENSMUST00000121715.1|Tmc5|ENSMUSG00000030650.11|transmembrane channel-like gene family 5 	ENSMUST00000098088.4|Tmc5|ENSMUSG00000030650.11|transmembrane channel-like gene family 5
mm10_v2_chr7_-_19887946_19887965	0.300796	Pitx3	ENSMUST00000052605.7|Ceacam19|ENSMUSG00000049848.7|carcinoembryonic antigen-related cell adhesion molecule 19
mm10_v2_chr15_-_73061204_73061234	0.300565	Pitx3	ENSMUST00000089770.3|Trappc9|ENSMUSG00000047921.9|trafficking protein particle complex 9 	ENSMUST00000170633.1|Trappc9|ENSMUSG00000047921.9|trafficking protein particle complex 9 	ENSMUST00000168191.1|Trappc9|ENSMUSG00000047921.9|trafficking protein particle complex 9
mm10_v2_chr4_-_144274027_144274027	0.30005	Pitx3	ENSMUST00000105752.3|Pramel5|ENSMUSG00000036749.9|preferentially expressed antigen in melanoma like 5
mm10_v2_chr18_-_22850738_22850759	0.298628	Pitx3	ENSMUST00000092015.4|Nol4|ENSMUSG00000041923.9|nucleolar protein 4 	ENSMUST00000069215.6|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr1_-_30978965_30978965	0.298169	Pitx3	ENSMUST00000156220.1|Gm5698|ENSMUSG00000086151.2|predicted gene 5698
mm10_v2_chr10_-_33624587_33624769	0.297654	Pitx3	ENSMUST00000160299.1|Clvs2|ENSMUSG00000019785.7|clavesin 2 	ENSMUST00000019920.6|Clvs2|ENSMUSG00000019785.7|clavesin 2
mm10_v2_chr2_-_165090739_165090752	0.293743	Pitx3	ENSMUST00000109304.1|1700025C18Rik|ENSMUSG00000078935.1|RIKEN cDNA 1700025C18 gene
mm10_v2_chr5_-_135563569_135563569	0.293554	Pitx3	ENSMUST00000094226.1|Ccl26|ENSMUSG00000070464.1|chemokine (C-C motif) ligand 26
mm10_v2_chr9_-_89092835_89092835	0.292926	Pitx3	ENSMUST00000167113.1|Trim43b|ENSMUSG00000079162.2|tripartite motif-containing 43B
mm10_v2_chr10_+_104194457_104194457	0.292372	Pitx3	ENSMUST00000181036.1|Gm4340|ENSMUSG00000090854.3|predicted gene 4340
mm10_v2_chr10_+_104151912_104151912	0.291534	Pitx3	ENSMUST00000180692.1|Gm6763|ENSMUSG00000097427.1|predicted gene 6763
mm10_v2_chr10_+_104177439_104177439	0.291534	Pitx3	ENSMUST00000181239.1|Gm21312|ENSMUSG00000094144.2|predicted gene, 21312
mm10_v2_chr10_+_104143402_104143402	0.291534	Pitx3	ENSMUST00000180664.1|Gm6763|ENSMUSG00000091779.2|predicted gene 6763
mm10_v2_chr10_+_104160421_104160421	0.291534	Pitx3	ENSMUST00000181166.1|Gm8764|ENSMUSG00000097878.1|predicted gene 8764
mm10_v2_chr10_+_104185948_104185948	0.291534	Pitx3	ENSMUST00000181707.1|Gm20765|ENSMUSG00000095022.2|predicted gene, 20765
mm10_v2_chr10_+_104168930_104168930	0.291534	Pitx3	ENSMUST00000180568.1|Gm21304|ENSMUSG00000097550.1|predicted gene, 21304
mm10_v2_chr6_+_90269106_90269106	0.290952	Pitx3	ENSMUST00000058039.2|Vmn1r54|ENSMUSG00000047203.2|vomeronasal 1 receptor 54
mm10_v2_chr15_-_83122756_83122801	0.289679	Pitx3	ENSMUST00000018184.3|Rrp7a|ENSMUSG00000018040.3|ribosomal RNA processing 7 homolog A (S. cerevisiae)
mm10_v2_chrY_-_83853059_83853059	0.288159	Pitx3	ENSMUST00000180274.1|Gm20863|ENSMUSG00000094857.1|predicted gene, 20863
mm10_v2_chrY_-_75466372_75466372	0.288159	Pitx3	ENSMUST00000177869.1|Gm21922|ENSMUSG00000093819.1|predicted gene, 21922
mm10_v2_chrY_-_74789646_74789646	0.288159	Pitx3	ENSMUST00000179145.1|Gm21076|ENSMUSG00000093882.1|predicted gene, 21076
mm10_v2_chrY_-_83715782_83715782	0.288159	Pitx3	ENSMUST00000180018.1|Gm21741|ENSMUSG00000095582.1|predicted gene, 21741
mm10_v2_chrY_-_83288579_83288579	0.288147	Pitx3	ENSMUST00000178222.1|Gm21864|ENSMUSG00000096816.1|predicted gene, 21864
mm10_v2_chrY_-_74951338_74951338	0.287522	Pitx3	ENSMUST00000178873.1|Gm21869|ENSMUSG00000095949.1|predicted gene, 21869
mm10_v2_chr10_-_117238647_117238654	0.285496	Pitx3	ENSMUST00000159193.1|9530003J23Rik|ENSMUSG00000020177.6|RIKEN cDNA 9530003J23 gene
mm10_v2_chrY_-_77149422_77149422	0.281767	Pitx3	ENSMUST00000178718.1|Gm20859|ENSMUSG00000096491.1|predicted gene, 20859
mm10_v2_chrY_+_68464868_68464868	0.281767	Pitx3	ENSMUST00000179830.1|Gm21127|ENSMUSG00000095496.1|predicted gene, 21127
mm10_v2_chrY_-_52262626_52262626	0.281766	Pitx3	ENSMUST00000178928.1|Gm21245|ENSMUSG00000095568.1|predicted gene, 21245
mm10_v2_chrY_-_72039692_72039692	0.281766	Pitx3	ENSMUST00000178109.1|Gm20842|ENSMUSG00000093837.1|predicted gene, 20842
mm10_v2_chrY_-_64859352_64859352	0.281766	Pitx3	ENSMUST00000178067.1|Gm20921|ENSMUSG00000094490.1|predicted gene, 20921
mm10_v2_chrY_+_35301254_35301254	0.281765	Pitx3	ENSMUST00000179413.1|Gm20799|ENSMUSG00000094853.1|predicted gene, 20799
mm10_v2_chrY_-_85454516_85454516	0.280323	Pitx3	ENSMUST00000178264.1|Gm21785|ENSMUSG00000096187.1|predicted gene, 21785
mm10_v2_chrY_-_85814909_85814909	0.280323	Pitx3	ENSMUST00000177729.1|Gm21881|ENSMUSG00000095167.1|predicted gene, 21881
mm10_v2_chr11_+_70615888_70615910	0.280114	Pitx3	ENSMUST00000144960.1|4930544D05Rik|ENSMUSG00000087279.4|RIKEN cDNA 4930544D05 gene
mm10_v2_chr11_-_69237022_69237044	0.278689	Pitx3	ENSMUST00000021259.2|Gucy2e|ENSMUSG00000020890.5|guanylate cyclase 2e 	ENSMUST00000108665.1|Gucy2e|ENSMUSG00000020890.5|guanylate cyclase 2e 	ENSMUST00000108664.1|Gucy2e|ENSMUSG00000020890.5|guanylate cyclase 2e
mm10_v2_chrY_+_5727496_5727496	0.27804	Pitx3	ENSMUST00000180372.1|Gm20914|ENSMUSG00000096268.1|predicted gene, 20914
mm10_v2_chr9_+_99575776_99575829	0.277977	Pitx3	ENSMUST00000066650.5|Dbr1|ENSMUSG00000032469.6|debranching enzyme homolog 1 (S. cerevisiae) 	ENSMUST00000148987.1|Dbr1|ENSMUSG00000032469.6|debranching enzyme homolog 1 (S. cerevisiae)
mm10_v2_chr8_-_27128615_27128687	0.274926	Pitx3	ENSMUST00000033877.4|Brf2|ENSMUSG00000031487.4|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like
mm10_v2_chrY_-_50955531_50955531	0.27332	Pitx3	ENSMUST00000179102.1|Gm20887|ENSMUSG00000095397.1|predicted gene, 20887
mm10_v2_chrY_-_82862028_82862028	0.27332	Pitx3	ENSMUST00000178638.1|Gm20849|ENSMUSG00000095921.1|predicted gene, 20849
mm10_v2_chr15_+_80948484_80948549	0.273013	Pitx3	ENSMUST00000023043.2|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase 	ENSMUST00000168756.1|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase 	ENSMUST00000164806.1|Adsl|ENSMUSG00000022407.2|adenylosuccinate lyase
mm10_v2_chr18_+_57533780_57533882	0.271435	Pitx3	ENSMUST00000079738.3|1700011I03Rik|ENSMUSG00000058925.5|RIKEN cDNA 1700011I03 gene 	ENSMUST00000135806.1|1700011I03Rik|ENSMUSG00000058925.5|RIKEN cDNA 1700011I03 gene 	ENSMUST00000127130.2|1700011I03Rik|ENSMUSG00000058925.5|RIKEN cDNA 1700011I03 gene
mm10_v2_chr7_-_30194150_30194162	0.271116	Pitx3	ENSMUST00000126116.1|Capns1|ENSMUSG00000001794.6|calpain, small subunit 1
mm10_v2_chr7_-_126566364_126566416	0.271114	Pitx3	ENSMUST00000032992.5|Eif3c|ENSMUSG00000030738.10|eukaryotic translation initiation factor 3, subunit C
mm10_v2_chr5_-_124425907_124425946	0.268581	Pitx3	ENSMUST00000065263.5|Sbno1|ENSMUSG00000038095.9|sno, strawberry notch homolog 1 (Drosophila)
mm10_v2_chr18_-_46280820_46280850	0.268353	Pitx3	ENSMUST00000025354.3|Pggt1b|ENSMUSG00000024477.3|protein geranylgeranyltransferase type I, beta subunit
mm10_v2_chr17_+_34135182_34135182	0.2663	Pitx3	ENSMUST00000042121.9|H2-DMa|ENSMUSG00000037649.9|histocompatibility 2, class II, locus DMa
mm10_v2_chr7_+_97919949_97919966	0.265362	Pitx3	ENSMUST00000041860.6|Gdpd4|ENSMUSG00000035582.7|glycerophosphodiester phosphodiesterase domain containing 4
mm10_v2_chr12_-_66284394_66284412	0.264303	Pitx3	ENSMUST00000081908.6|Rpl10l|ENSMUSG00000060499.6|ribosomal protein L10-like
mm10_v2_chr19_-_41896132_41896155	0.263502	Pitx3	ENSMUST00000038677.3|Rrp12|ENSMUSG00000035049.3|ribosomal RNA processing 12 homolog (S. cerevisiae)
mm10_v2_chrY_-_86944319_86944319	0.262037	Pitx3	ENSMUST00000178548.1|Gm21470|ENSMUSG00000096625.1|predicted gene, 21470
mm10_v2_chr7_+_45154644_45154734	0.260904	Pitx3	ENSMUST00000153973.1|Pih1d1|ENSMUSG00000003423.8|PIH1 domain containing 1
mm10_v2_chrY_+_24969606_24969606	0.260689	Pitx3	ENSMUST00000179822.1|Gm21412|ENSMUSG00000096657.1|predicted gene, 21412
mm10_v2_chrY_-_51606491_51606491	0.260689	Pitx3	ENSMUST00000178269.1|Gm21387|ENSMUSG00000096395.1|predicted gene, 21387
mm10_v2_chrY_-_73239904_73239904	0.260689	Pitx3	ENSMUST00000179537.1|Gm20800|ENSMUSG00000096234.1|predicted gene, 20800
mm10_v2_chrY_+_25921142_25921142	0.260689	Pitx3	ENSMUST00000178189.1|Gm21890|ENSMUSG00000094014.1|predicted gene, 21890
mm10_v2_chrY_+_25408061_25408061	0.260689	Pitx3	ENSMUST00000179773.1|Gm21791|ENSMUSG00000096103.1|predicted gene, 21791
mm10_v2_chrY_-_81725302_81725302	0.260689	Pitx3	ENSMUST00000177798.1|Gm20912|ENSMUSG00000096548.1|predicted gene, 20912
mm10_v2_chrY_-_72383262_72383262	0.260689	Pitx3	ENSMUST00000180348.1|Gm20844|ENSMUSG00000094142.1|predicted gene, 20844
mm10_v2_chrY_-_65939962_65939962	0.260689	Pitx3	ENSMUST00000180295.1|Gm20933|ENSMUSG00000094816.1|predicted gene, 20933
mm10_v2_chrY_-_72820330_72820330	0.260689	Pitx3	ENSMUST00000179517.1|Gm20846|ENSMUSG00000095598.1|predicted gene, 20846
mm10_v2_chrY_+_26434218_26434218	0.260689	Pitx3	ENSMUST00000178570.1|Gm21755|ENSMUSG00000095043.1|predicted gene, 21755
mm10_v2_chrY_+_24894925_24894925	0.260689	Pitx3	ENSMUST00000177807.1|Gm21350|ENSMUSG00000096116.1|predicted gene, 21350
mm10_v2_chrY_+_24381817_24381817	0.260689	Pitx3	ENSMUST00000177717.1|Gm21845|ENSMUSG00000094479.1|predicted gene, 21845
mm10_v2_chrY_+_28443743_28443743	0.260689	Pitx3	ENSMUST00000179068.1|Gm21642|ENSMUSG00000096752.1|predicted gene, 21642
mm10_v2_chrY_-_64227755_64227755	0.260689	Pitx3	ENSMUST00000177938.1|Gm20882|ENSMUSG00000095215.1|predicted gene, 20882
mm10_v2_chrY_+_23381504_23381504	0.260689	Pitx3	ENSMUST00000180340.1|Gm20926|ENSMUSG00000095733.1|predicted gene, 20926
mm10_v2_chrY_-_77074728_77074728	0.260689	Pitx3	ENSMUST00000177623.1|Gm21180|ENSMUSG00000093982.1|predicted gene, 21180
mm10_v2_chrY_+_35644173_35644173	0.260689	Pitx3	ENSMUST00000178709.1|Gm20798|ENSMUSG00000096050.1|predicted gene, 20798
mm10_v2_chrY_-_81204493_81204493	0.260689	Pitx3	ENSMUST00000179373.1|Gm21282|ENSMUSG00000095441.1|predicted gene, 21282
mm10_v2_chrY_+_68539472_68539472	0.260689	Pitx3	ENSMUST00000177765.1|Gm20816|ENSMUSG00000095634.1|predicted gene, 20816
mm10_v2_chrY_-_53342254_53342254	0.260689	Pitx3	ENSMUST00000177621.1|Gm21285|ENSMUSG00000094339.1|predicted gene, 21285
mm10_v2_chrY_+_24456582_24456582	0.260689	Pitx3	ENSMUST00000179663.1|Gm20809|ENSMUSG00000093868.1|predicted gene, 20809
mm10_v2_chrY_-_65649184_65649184	0.260689	Pitx3	ENSMUST00000178339.1|Gm20936|ENSMUSG00000094908.1|predicted gene, 20936
mm10_v2_chrY_-_53051486_53051486	0.260689	Pitx3	ENSMUST00000177852.1|Gm21268|ENSMUSG00000095181.1|predicted gene, 21268
mm10_v2_chrY_+_25482701_25482701	0.260689	Pitx3	ENSMUST00000179838.1|Gm21427|ENSMUSG00000094223.1|predicted gene, 21427
mm10_v2_chrY_+_27179288_27179288	0.260689	Pitx3	ENSMUST00000179877.1|Gm21771|ENSMUSG00000096509.1|predicted gene, 21771
mm10_v2_chrY_+_27924318_27924318	0.260689	Pitx3	ENSMUST00000180279.1|Gm20891|ENSMUSG00000094633.1|predicted gene, 20891
mm10_v2_chr13_+_33027408_33027419	0.259843	Pitx3	ENSMUST00000006392.2|Serpinb9b|ENSMUSG00000021403.2|serine (or cysteine) peptidase inhibitor, clade B, member 9b
mm10_v2_chr3_+_116878227_116878227	0.259228	Pitx3	ENSMUST00000040260.6|Frrs1|ENSMUSG00000033386.6|ferric-chelate reductase 1
mm10_v2_chr7_-_4604041_4604053	0.259106	Pitx3	ENSMUST00000166650.1|Ptprh|ENSMUSG00000035429.7|protein tyrosine phosphatase, receptor type, H
mm10_v2_chr9_+_108986163_108986163	0.25843	Pitx3	ENSMUST00000052724.3|Ucn2|ENSMUSG00000049699.3|urocortin 2
mm10_v2_chr11_+_74770908_74770920	0.254707	Pitx3	ENSMUST00000128504.1|Mettl16|ENSMUSG00000010554.8|methyltransferase like 16
mm10_v2_chrY_-_70197533_70197533	0.252853	Pitx3	ENSMUST00000178860.1|Gm21672|ENSMUSG00000094260.1|predicted gene, 21672
mm10_v2_chrY_-_63501598_63501598	0.252853	Pitx3	ENSMUST00000177673.1|Gm21634|ENSMUSG00000096503.1|predicted gene, 21634
mm10_v2_chrY_-_77961690_77961690	0.252853	Pitx3	ENSMUST00000178900.1|Gm20867|ENSMUSG00000096898.1|predicted gene, 20867
mm10_v2_chrY_-_49318753_49318753	0.252853	Pitx3	ENSMUST00000177930.1|Gm21308|ENSMUSG00000096063.1|predicted gene, 21308
mm10_v2_chrY_-_61946433_61946433	0.252853	Pitx3	ENSMUST00000178579.1|Gm20803|ENSMUSG00000096636.1|predicted gene, 20803
mm10_v2_chr7_-_84679346_84679401	0.252129	Pitx3	ENSMUST00000069537.2|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6 	ENSMUST00000178385.1|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6
mm10_v2_chrY_-_49843610_49843610	0.251099	Pitx3	ENSMUST00000177618.1|Gm21316|ENSMUSG00000096781.1|predicted gene, 21316
mm10_v2_chrY_+_68023542_68023542	0.251099	Pitx3	ENSMUST00000178448.1|Gm20935|ENSMUSG00000093790.1|predicted gene, 20935
mm10_v2_chrY_-_52608321_52608321	0.251099	Pitx3	ENSMUST00000179559.1|Gm21249|ENSMUSG00000095359.1|predicted gene, 21249
mm10_v2_chrY_-_70706829_70706829	0.251099	Pitx3	ENSMUST00000179571.1|Gm20886|ENSMUSG00000095485.1|predicted gene, 20886
mm10_v2_chrY_-_65206008_65206008	0.251099	Pitx3	ENSMUST00000177663.1|Gm20924|ENSMUSG00000095785.1|predicted gene, 20924
mm10_v2_chr2_+_28506095_28506095	0.245657	Pitx3	ENSMUST00000074761.4|Gm10134|ENSMUSG00000063611.4|predicted gene 10134
mm10_v2_chr10_-_127311740_127311786	0.242943	Pitx3	ENSMUST00000037290.5|Mars|ENSMUSG00000040354.8|methionine-tRNA synthetase 	ENSMUST00000171564.1|Mars|ENSMUSG00000040354.8|methionine-tRNA synthetase
mm10_v2_chr8_+_70673364_70673432	0.240382	Pitx3	ENSMUST00000146972.1|Lsm4|ENSMUSG00000031848.8|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
mm10_v2_chr3_+_90072641_90072657	0.24027	Pitx3	ENSMUST00000121503.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000119570.1|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma 	ENSMUST00000062193.9|Tpm3|ENSMUSG00000027940.12|tropomyosin 3, gamma
mm10_v2_chr7_-_29180699_29180710	0.239261	Pitx3	ENSMUST00000059642.10|Psmd8|ENSMUSG00000030591.10|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm10_v2_chrX_+_134187492_134187503	0.234562	Pitx3	ENSMUST00000064476.4|Arl13a|ENSMUSG00000052549.4|ADP-ribosylation factor-like 13A
mm10_v2_chr8_-_129221950_129221950	0.234319	Pitx3	ENSMUST00000079272.6|2610044O15Rik8|ENSMUSG00000071302.4|RIKEN cDNA 2610044O15 gene
mm10_v2_chr3_-_54807770_54807804	0.233166	Pitx3	ENSMUST00000044373.5|Rfxap|ENSMUSG00000036615.5|regulatory factor X-associated protein
mm10_v2_chr15_-_103429547_103429565	0.232778	Pitx3	ENSMUST00000146736.1|Gtsf1|ENSMUSG00000022487.8|gametocyte specific factor 1
mm10_v2_chr1_+_174136746_174136746	0.230136	Pitx3	ENSMUST00000053941.3|Olfr424|ENSMUSG00000051528.3|olfactory receptor 424
mm10_v2_chr14_-_56120623_56120627	0.229749	Pitx3	ENSMUST00000089549.6|Gzme|ENSMUSG00000022156.7|granzyme E
mm10_v2_chr9_-_7873016_7873046	0.229039	Pitx3	ENSMUST00000013949.8|Birc3|ENSMUSG00000032000.11|baculoviral IAP repeat-containing 3
mm10_v2_chr8_+_65967157_65967191	0.228558	Pitx3	ENSMUST00000072482.6|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr6_-_99435345_99435368	0.228204	Pitx3	ENSMUST00000113322.2|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000176850.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000176632.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr2_-_127584668_127584703	0.227287	Pitx3	ENSMUST00000110368.2|Zfp661|ENSMUSG00000034800.9|zinc finger protein 661 	ENSMUST00000077422.5|Zfp661|ENSMUSG00000034800.9|zinc finger protein 661
mm10_v2_chr7_+_24903011_24903080	0.224656	Pitx3	ENSMUST00000047873.9|Arhgef1|ENSMUSG00000040940.12|Rho guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000098683.4|Arhgef1|ENSMUSG00000040940.12|Rho guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr16_-_93603803_93603815	0.223119	Pitx3	ENSMUST00000023669.5|Setd4|ENSMUSG00000022948.8|SET domain containing 4 	ENSMUST00000113951.2|Setd4|ENSMUSG00000022948.8|SET domain containing 4
mm10_v2_chrY_-_56250174_56250174	0.222573	Pitx3	ENSMUST00000179016.1|Gm21851|ENSMUSG00000095244.1|predicted gene, 21851
mm10_v2_chrY_-_55484007_55484007	0.222573	Pitx3	ENSMUST00000178346.1|Gm21733|ENSMUSG00000096572.1|predicted gene, 21733
mm10_v2_chrY_-_54415539_54415539	0.222573	Pitx3	ENSMUST00000178413.1|Gm21740|ENSMUSG00000094450.1|predicted gene, 21740
mm10_v2_chrY_-_57457990_57457990	0.222573	Pitx3	ENSMUST00000178649.1|Gm21868|ENSMUSG00000094061.1|predicted gene, 21868
mm10_v2_chrY_+_28733498_28733498	0.221912	Pitx3	ENSMUST00000180127.1|Gm20810|ENSMUSG00000095830.1|predicted gene, 20810
mm10_v2_chr10_-_71285234_71285262	0.22046	Pitx3	ENSMUST00000020085.6|Ube2d1|ENSMUSG00000019927.6|ubiquitin-conjugating enzyme E2D 1
mm10_v2_chr5_+_115605642_115605696	0.218534	Pitx3	ENSMUST00000094427.3|Gcn1l1|ENSMUSG00000041638.12|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)
mm10_v2_chr2_+_164823001_164823040	0.218038	Pitx3	ENSMUST00000132282.1|Zswim1|ENSMUSG00000017764.2|zinc finger SWIM-type containing 1
mm10_v2_chrY_-_79590982_79590982	0.217577	Pitx3	ENSMUST00000179173.1|Gm21823|ENSMUSG00000096369.1|predicted gene, 21823
mm10_v2_chrY_-_88805474_88805474	0.21709	Pitx3	ENSMUST00000178351.1|Gm21287|ENSMUSG00000094909.1|predicted gene, 21287
mm10_v2_chr14_+_53337122_53337122	0.216615	Pitx3	ENSMUST00000179580.1|Trav13n-3|ENSMUSG00000096038.1|T cell receptor alpha variable 13N-3
mm10_v2_chr9_+_85312773_85312773	0.215301	Pitx3	ENSMUST00000113205.1|Gm11114|ENSMUSG00000079433.1|predicted gene 11114
mm10_v2_chr10_+_57650990_57651010	0.212429	Pitx3	ENSMUST00000175852.1|Pkib|ENSMUSG00000019876.9|protein kinase inhibitor beta, cAMP dependent, testis specific
mm10_v2_chrY_+_35569461_35569461	0.212137	Pitx3	ENSMUST00000180002.1|Gm21872|ENSMUSG00000094653.1|predicted gene, 21872
mm10_v2_chr9_-_96478660_96478675	0.21128	Pitx3	ENSMUST00000057500.4|Rnf7|ENSMUSG00000051234.5|ring finger protein 7
mm10_v2_chr13_+_49608030_49608071	0.208759	Pitx3	ENSMUST00000021822.5|Ogn|ENSMUSG00000021390.5|osteoglycin
mm10_v2_chr6_-_29609811_29609887	0.208091	Pitx3	ENSMUST00000012679.8|Tnpo3|ENSMUSG00000012535.8|transportin 3
mm10_v2_chr1_+_92906959_92907036	0.205344	Pitx3	ENSMUST00000060913.6|Dusp28|ENSMUSG00000047067.6|dual specificity phosphatase 28
mm10_v2_chr3_+_92432578_92432585	0.204673	Pitx3	ENSMUST00000067102.2|Sprr2k|ENSMUSG00000054215.2|small proline-rich protein 2K
mm10_v2_chrY_-_79074940_79074940	0.204506	Pitx3	ENSMUST00000178606.1|Gm20919|ENSMUSG00000096203.1|predicted gene, 20919
mm10_v2_chrY_+_23031235_23031235	0.203988	Pitx3	ENSMUST00000178910.1|Gm21469|ENSMUSG00000095622.1|predicted gene, 21469
mm10_v2_chrY_-_83790566_83790566	0.203988	Pitx3	ENSMUST00000178994.1|Gm20862|ENSMUSG00000096552.1|predicted gene, 20862
mm10_v2_chrY_-_66740610_66740610	0.203988	Pitx3	ENSMUST00000178761.1|Gm20852|ENSMUSG00000096666.1|predicted gene, 20852
mm10_v2_chrY_-_84440964_84440964	0.203988	Pitx3	ENSMUST00000179959.1|Gm21380|ENSMUSG00000094469.1|predicted gene, 21380
mm10_v2_chrY_-_75540398_75540398	0.203988	Pitx3	ENSMUST00000178387.1|Gm21111|ENSMUSG00000096843.1|predicted gene, 21111
mm10_v2_chrY_-_57017520_57017520	0.203988	Pitx3	ENSMUST00000179148.1|Gm20913|ENSMUSG00000094839.1|predicted gene, 20913
mm10_v2_chrY_-_55044004_55044004	0.203988	Pitx3	ENSMUST00000179739.1|Gm20930|ENSMUSG00000096034.1|predicted gene, 20930
mm10_v2_chrY_-_54186670_54186670	0.203988	Pitx3	ENSMUST00000178094.1|Gm21302|ENSMUSG00000094169.1|predicted gene, 21302
mm10_v2_chrY_-_75026075_75026075	0.203988	Pitx3	ENSMUST00000177922.1|Gm20813|ENSMUSG00000095808.1|predicted gene, 20813
mm10_v2_chrY_-_85889645_85889645	0.203988	Pitx3	ENSMUST00000177993.1|Gm21435|ENSMUSG00000095443.1|predicted gene, 21435
mm10_v2_chrY_-_83927735_83927735	0.203988	Pitx3	ENSMUST00000179616.1|Gm20864|ENSMUSG00000096125.1|predicted gene, 20864
mm10_v2_chrY_+_21166083_21166083	0.203987	Pitx3	ENSMUST00000178234.1|Gm20909|ENSMUSG00000094294.2|predicted gene, 20909
mm10_v2_chrY_-_73536230_73536230	0.203987	Pitx3	ENSMUST00000180169.1|Gm20902|ENSMUSG00000096754.1|predicted gene, 20902
mm10_v2_chrY_-_81799967_81799967	0.203987	Pitx3	ENSMUST00000179785.1|Gm20801|ENSMUSG00000095067.1|predicted gene, 20801
mm10_v2_chrY_-_53416775_53416775	0.203987	Pitx3	ENSMUST00000179137.1|Gm20747|ENSMUSG00000094729.1|predicted gene, 20747
mm10_v2_chrY_-_83362381_83362381	0.203987	Pitx3	ENSMUST00000179849.1|Gm21802|ENSMUSG00000095726.1|predicted gene, 21802
mm10_v2_chrY_-_73314512_73314512	0.203987	Pitx3	ENSMUST00000177855.1|Gm21683|ENSMUSG00000096013.1|predicted gene, 21683
mm10_v2_chrY_+_23306767_23306767	0.203987	Pitx3	ENSMUST00000178648.1|Gm20925|ENSMUSG00000094166.1|predicted gene, 20925
mm10_v2_chrY_-_76061651_76061651	0.203987	Pitx3	ENSMUST00000179698.1|Gm20904|ENSMUSG00000096207.1|predicted gene, 20904
mm10_v2_chrY_-_86434894_86434894	0.203845	Pitx3	ENSMUST00000179044.1|Gm20860|ENSMUSG00000094744.1|predicted gene, 20860
mm10_v2_chr16_-_59027927_59027927	0.202545	Pitx3	ENSMUST00000062380.2|Olfr186|ENSMUSG00000047960.2|olfactory receptor 186
mm10_v2_chr8_-_95281590_95281610	0.202054	Pitx3	ENSMUST00000120044.2|Cngb1|ENSMUSG00000031789.10|cyclic nucleotide gated channel beta 1 	ENSMUST00000121162.2|Cngb1|ENSMUSG00000031789.10|cyclic nucleotide gated channel beta 1
mm10_v2_chr1_+_191036812_191036825	0.201174	Pitx3	ENSMUST00000077889.6|1700022P22Rik|ENSMUSG00000057072.6|RIKEN cDNA 1700022P22 gene
mm10_v2_chr13_-_104178399_104178480	0.200417	Pitx3	ENSMUST00000179891.1|Trappc13|ENSMUSG00000021711.10|trafficking protein particle complex 13 	ENSMUST00000022224.9|Trappc13|ENSMUSG00000021711.10|trafficking protein particle complex 13 	ENSMUST00000141557.1|Trappc13|ENSMUSG00000021711.10|trafficking protein particle complex 13 	ENSMUST00000091264.1|Trappc13|ENSMUSG00000078936.1|trafficking protein particle complex 13 	ENSMUST00000144060.1|Trappc13|ENSMUSG00000021711.10|trafficking protein particle complex 13
mm10_v2_chr10_+_81384418_81384452	0.196926	Pitx3	ENSMUST00000072751.6|Dohh|ENSMUSG00000078440.3|deoxyhypusine hydroxylase/monooxygenase
mm10_v2_chr11_+_105146893_105146893	0.196773	Pitx3	ENSMUST00000100338.1|Gm10842|ENSMUSG00000075485.1|predicted gene 10842
mm10_v2_chrY_+_28518281_28518281	0.196156	Pitx3	ENSMUST00000178131.1|Gm21804|ENSMUSG00000096394.1|predicted gene, 21804
mm10_v2_chrY_+_27998840_27998840	0.196156	Pitx3	ENSMUST00000180057.1|Gm20893|ENSMUSG00000096165.1|predicted gene, 20893
mm10_v2_chrY_-_63055872_63055872	0.196156	Pitx3	ENSMUST00000177788.1|Gm21617|ENSMUSG00000095515.1|predicted gene, 21617
mm10_v2_chrY_+_27253916_27253916	0.196156	Pitx3	ENSMUST00000179896.1|Gm21476|ENSMUSG00000095158.1|predicted gene, 21476
mm10_v2_chrY_+_26508824_26508824	0.196156	Pitx3	ENSMUST00000179045.1|Gm20895|ENSMUSG00000096246.1|predicted gene, 20895
mm10_v2_chrY_+_27692628_27692628	0.196156	Pitx3	ENSMUST00000178381.1|Gm21506|ENSMUSG00000096101.1|predicted gene, 21506
mm10_v2_chrY_+_26947544_26947544	0.196156	Pitx3	ENSMUST00000180115.1|Gm20892|ENSMUSG00000096004.1|predicted gene, 20892
mm10_v2_chrY_-_64302598_64302598	0.196156	Pitx3	ENSMUST00000179622.1|Gm20907|ENSMUSG00000094216.1|predicted gene, 20907
mm10_v2_chrY_-_51681223_51681223	0.196156	Pitx3	ENSMUST00000179651.1|Gm21396|ENSMUSG00000095823.1|predicted gene, 21396
mm10_v2_chrY_-_50435859_50435859	0.196156	Pitx3	ENSMUST00000178299.1|Gm20881|ENSMUSG00000095055.1|predicted gene, 20881
mm10_v2_chrY_-_71224005_71224005	0.196153	Pitx3	ENSMUST00000177571.1|Gm20866|ENSMUSG00000096489.1|predicted gene, 20866
mm10_v2_chrY_-_62981165_62981165	0.196153	Pitx3	ENSMUST00000178521.1|Gm21530|ENSMUSG00000095417.1|predicted gene, 21530
mm10_v2_chrY_-_50361155_50361155	0.196153	Pitx3	ENSMUST00000178141.1|Gm20880|ENSMUSG00000096226.1|predicted gene, 20880
mm10_v2_chrY_+_34781126_34781126	0.195543	Pitx3	ENSMUST00000179452.1|Gm20853|ENSMUSG00000096162.1|predicted gene, 20853
mm10_v2_chrY_-_80463929_80463929	0.195543	Pitx3	ENSMUST00000180185.1|Gm21257|ENSMUSG00000094742.1|predicted gene, 21257
mm10_v2_chrY_-_74300895_74300895	0.195543	Pitx3	ENSMUST00000178984.1|Gm20805|ENSMUSG00000095378.1|predicted gene, 20805
mm10_v2_chrY_-_56324320_56324320	0.195543	Pitx3	ENSMUST00000177558.1|Gm21819|ENSMUSG00000095381.1|predicted gene, 21819
mm10_v2_chrY_+_22513860_22513860	0.195543	Pitx3	ENSMUST00000178985.1|Gm21065|ENSMUSG00000094611.1|predicted gene, 21065
mm10_v2_chrY_-_67046566_67046566	0.195543	Pitx3	ENSMUST00000179136.1|Ssty2|ENSMUSG00000095302.1|spermiogenesis specific transcript on the Y 2
mm10_v2_chrY_-_54489811_54489811	0.195543	Pitx3	ENSMUST00000177749.1|Gm21912|ENSMUSG00000095459.1|predicted gene, 21912
mm10_v2_chrY_-_82568207_82568207	0.195543	Pitx3	ENSMUST00000178088.1|Gm21333|ENSMUSG00000094348.1|predicted gene, 21333
mm10_v2_chrY_+_69352610_69352610	0.195543	Pitx3	ENSMUST00000178496.1|Gm21160|ENSMUSG00000095855.1|predicted gene, 21160
mm10_v2_chrY_-_9345654_9345654	0.195542	Pitx3	ENSMUST00000179590.1|Gm21812|ENSMUSG00000094773.1|predicted gene, 21812
mm10_v2_chrY_-_76576410_76576410	0.195542	Pitx3	ENSMUST00000179497.1|Gm21163|ENSMUSG00000094549.1|predicted gene, 21163
mm10_v2_chrY_+_69017824_69017824	0.195542	Pitx3	ENSMUST00000179438.1|Gm20818|ENSMUSG00000095888.1|predicted gene, 20818
mm10_v2_chrY_-_48670459_48670459	0.195542	Pitx3	ENSMUST00000179582.1|Gm21281|ENSMUSG00000094246.1|predicted gene, 21281
mm10_v2_chrY_+_46757399_46757399	0.195542	Pitx3	ENSMUST00000179950.1|Gm21247|ENSMUSG00000095617.1|predicted gene, 21247
mm10_v2_chrY_-_61460715_61460715	0.195542	Pitx3	ENSMUST00000178176.1|Gm21573|ENSMUSG00000095038.1|predicted gene, 21573
mm10_v2_chrY_+_34486834_34486834	0.195542	Pitx3	ENSMUST00000178803.1|Gm21184|ENSMUSG00000095405.1|predicted gene, 21184
mm10_v2_chrY_-_55558343_55558343	0.195542	Pitx3	ENSMUST00000178916.1|Gm21330|ENSMUSG00000096058.1|predicted gene, 21330
mm10_v2_chrY_-_50880880_50880880	0.194237	Pitx3	ENSMUST00000178018.1|Gm20889|ENSMUSG00000094425.1|predicted gene, 20889
mm10_v2_chr4_-_155645408_155645408	0.18987	Pitx3	ENSMUST00000115821.2|Gm10563|ENSMUSG00000073682.3|predicted gene 10563
mm10_v2_chr9_+_18856627_18856627	0.189505	Pitx3	ENSMUST00000058411.3|Olfr829|ENSMUSG00000051414.3|olfactory receptor 829
mm10_v2_chrY_-_85529518_85529518	0.188902	Pitx3	ENSMUST00000178889.1|Gm20854|ENSMUSG00000095650.2|predicted gene, 20854
mm10_v2_chr13_-_101692624_101692647	0.186684	Pitx3	ENSMUST00000035532.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr19_+_4139799_4139799	0.184519	Pitx3	ENSMUST00000096338.3|Gpr152|ENSMUSG00000044724.8|G protein-coupled receptor 152
mm10_v2_chr9_-_96478596_96478622	0.183406	Pitx3	ENSMUST00000071301.4|Rnf7|ENSMUSG00000051234.5|ring finger protein 7
mm10_v2_chr2_-_167661496_167661591	0.182842	Pitx3	ENSMUST00000125544.2|Gm20431|ENSMUSG00000089739.2|predicted gene 20431 	ENSMUST00000006587.6|Tmem189|ENSMUSG00000090213.1|transmembrane protein 189
mm10_v2_chrY_+_37884615_37884615	0.182714	Pitx3	ENSMUST00000178736.1|Gm20922|ENSMUSG00000094138.1|predicted gene, 20922
mm10_v2_chr15_+_36179530_36179701	0.17873	Pitx3	ENSMUST00000171205.1|Spag1|ENSMUSG00000037617.5|sperm associated antigen 1
mm10_v2_chr2_+_127008711_127008756	0.177036	Pitx3	ENSMUST00000110394.1|Ap4e1|ENSMUSG00000001998.9|adaptor-related protein complex AP-4, epsilon 1 	ENSMUST00000002063.8|Ap4e1|ENSMUSG00000001998.9|adaptor-related protein complex AP-4, epsilon 1
mm10_v2_chr9_+_69397933_69397972	0.175617	Pitx3	ENSMUST00000117610.1|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2 	ENSMUST00000145538.1|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2 	ENSMUST00000117246.1|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2
mm10_v2_chr15_+_79670856_79670888	0.172817	Pitx3	ENSMUST00000023062.3|Tomm22|ENSMUSG00000022427.3|translocase of outer mitochondrial membrane 22 homolog (yeast)
mm10_v2_chr1_+_133309778_133309890	0.171996	Pitx3	ENSMUST00000094557.4|Golt1a|ENSMUSG00000041717.9|golgi transport 1 homolog A (S. cerevisiae) 	ENSMUST00000183738.1|Kiss1|ENSMUSG00000091251.3|KiSS-1 metastasis-suppressor 	ENSMUST00000185157.1|Kiss1|ENSMUSG00000091251.3|KiSS-1 metastasis-suppressor 	ENSMUST00000184603.1|GOLT1A|ENSMUSG00000098306.1|KISS1 isoform e  	ENSMUST00000183457.1|Golt1a|ENSMUSG00000041717.9|golgi transport 1 homolog A (S. cerevisiae)
mm10_v2_chr7_-_79386943_79387027	0.171312	Pitx3	ENSMUST00000053718.8|Rlbp1|ENSMUSG00000039194.9|retinaldehyde binding protein 1 	ENSMUST00000179243.1|Rlbp1|ENSMUSG00000039194.9|retinaldehyde binding protein 1
mm10_v2_chr8_-_22805596_22805654	0.169539	Pitx3	ENSMUST00000163739.1|Ap3m2|ENSMUSG00000031539.5|adaptor-related protein complex 3, mu 2 subunit
mm10_v2_chr17_-_36642661_36642666	0.168268	Pitx3	ENSMUST00000087165.4|H2-M9|ENSMUSG00000067201.5|histocompatibility 2, M region locus 9 	ENSMUST00000087167.4|H2-M9|ENSMUSG00000067201.5|histocompatibility 2, M region locus 9
mm10_v2_chr5_+_90759299_90759367	0.167102	Pitx3	ENSMUST00000031318.4|Cxcl5|ENSMUSG00000029371.6|chemokine (C-X-C motif) ligand 5
mm10_v2_chrY_+_38172994_38172994	0.166053	Pitx3	ENSMUST00000178866.1|Gm21924|ENSMUSG00000095715.1|predicted gene, 21924
mm10_v2_chr14_+_61598226_61598241	0.159062	Pitx3	ENSMUST00000165015.1|Trim13|ENSMUSG00000035235.6|tripartite motif-containing 13
mm10_v2_chr11_+_74770822_74770876	0.157986	Pitx3	ENSMUST00000141755.1|Mettl16|ENSMUSG00000010554.8|methyltransferase like 16 	ENSMUST00000010698.6|Mettl16|ENSMUSG00000010554.8|methyltransferase like 16
mm10_v2_chr1_+_86022105_86022176	0.157718	Pitx3	ENSMUST00000131151.2|Spata3|ENSMUSG00000026226.9|spermatogenesis associated 3
mm10_v2_chr2_-_85519018_85519033	0.157617	Pitx3	ENSMUST00000099923.1|4833423E24Rik|ENSMUSG00000075217.1|RIKEN cDNA 4833423E24 gene
mm10_v2_chr18_-_43477764_43477836	0.157441	Pitx3	ENSMUST00000057110.9|Eif3j2|ENSMUSG00000043424.9|eukaryotic translation initiation factor 3, subunit J2
mm10_v2_chr17_-_23586214_23586269	0.152108	Pitx3	ENSMUST00000115516.3|Zfp13|ENSMUSG00000062012.7|zinc finger protein 13
mm10_v2_chr7_-_19921139_19921160	0.151695	Pitx3	ENSMUST00000043517.7|Pvr|ENSMUSG00000040511.7|poliovirus receptor
mm10_v2_chr8_+_88651341_88651341	0.147222	Pitx3	ENSMUST00000109634.2|Nod2|ENSMUSG00000055994.9|nucleotide-binding oligomerization domain containing 2
mm10_v2_chr7_-_114254659_114254733	0.146021	Pitx3	ENSMUST00000033012.7|Copb1|ENSMUSG00000030754.8|coatomer protein complex, subunit beta 1
mm10_v2_chr8_-_109608623_109608673	0.145131	Pitx3	ENSMUST00000123605.1|Dhodh|ENSMUSG00000031730.11|dihydroorotate dehydrogenase 	ENSMUST00000143900.1|Dhodh|ENSMUSG00000031730.11|dihydroorotate dehydrogenase 	ENSMUST00000069058.8|Dhodh|ENSMUSG00000031730.11|dihydroorotate dehydrogenase 	ENSMUST00000128350.1|Dhodh|ENSMUSG00000031730.11|dihydroorotate dehydrogenase
mm10_v2_chr7_-_27228605_27228636	0.145023	Pitx3	ENSMUST00000003850.7|Itpkc|ENSMUSG00000003752.8|inositol 1,4,5-trisphosphate 3-kinase C
mm10_v2_chr1_-_110977366_110977382	0.142848	Pitx3	ENSMUST00000094626.3|Cdh19|ENSMUSG00000047216.7|cadherin 19, type 2
mm10_v2_chr7_+_24902912_24902963	0.14146	Pitx3	ENSMUST00000117796.1|Arhgef1|ENSMUSG00000040940.12|Rho guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr17_+_34931253_34931343	0.14015	Pitx3	ENSMUST00000007253.5|Neu1|ENSMUSG00000007038.5|neuraminidase 1
mm10_v2_chr6_+_65042575_65042667	0.139668	Pitx3	ENSMUST00000031984.6|Smarcad1|ENSMUSG00000029920.7|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm10_v2_chrY_-_80757034_80757034	0.139052	Pitx3	ENSMUST00000180158.1|Gm20841|ENSMUSG00000094279.1|predicted gene, 20841
mm10_v2_chrY_-_78836543_78836543	0.139052	Pitx3	ENSMUST00000180324.1|Gm20806|ENSMUSG00000094739.1|predicted gene, 20806
mm10_v2_chr10_+_57650977_57650985	0.138813	Pitx3	ENSMUST00000066028.6|Pkib|ENSMUSG00000019876.9|protein kinase inhibitor beta, cAMP dependent, testis specific
mm10_v2_chr4_-_118489755_118489777	0.138583	Pitx3	ENSMUST00000184261.1|Tie1|ENSMUSG00000033191.8|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
mm10_v2_chr9_-_110375430_110375430	0.136777	Pitx3	ENSMUST00000168137.1|5830462I19Rik|ENSMUSG00000091102.1|RIKEN cDNA 5830462I19 gene
mm10_v2_chr11_+_96034885_96034965	0.136271	Pitx3	ENSMUST00000006217.3|Snf8|ENSMUSG00000006058.4|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) 	ENSMUST00000107700.3|Snf8|ENSMUSG00000006058.4|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)
mm10_v2_chrY_-_79959257_79959257	0.135807	Pitx3	ENSMUST00000178326.1|Gm21248|ENSMUSG00000094207.1|predicted gene, 21248
mm10_v2_chr7_+_5034118_5034118	0.135785	Pitx3	ENSMUST00000076791.3|4632433K11Rik|ENSMUSG00000063757.3|RIKEN cDNA 4632433K11 gene
mm10_v2_chr2_-_145935014_145935014	0.134403	Pitx3	ENSMUST00000001818.4|Crnkl1|ENSMUSG00000001767.5|Crn, crooked neck-like 1 (Drosophila)
mm10_v2_chr14_+_27039001_27039050	0.134282	Pitx3	ENSMUST00000035336.3|Il17rd|ENSMUSG00000040717.5|interleukin 17 receptor D
mm10_v2_chr12_-_87775755_87775755	0.130529	Pitx3	ENSMUST00000164517.2|Gm21319|ENSMUSG00000095724.1|predicted gene, 21319
mm10_v2_chrX_+_101640056_101640108	0.129771	Pitx3	ENSMUST00000119299.1|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) 	ENSMUST00000044475.4|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm10_v2_chrY_-_9132561_9132561	0.129427	Pitx3	ENSMUST00000171947.2|Gm21292|ENSMUSG00000091077.2|predicted gene, 21292
mm10_v2_chrX_+_71932433_71932444	0.129152	Pitx3	ENSMUST00000101495.2|Gm1141|ENSMUSG00000073130.2|predicted gene 1141
mm10_v2_chrY_-_86870055_86870055	0.128381	Pitx3	ENSMUST00000178151.1|Gm21462|ENSMUSG00000094761.1|predicted gene, 21462
mm10_v2_chr7_+_15896124_15896171	0.126548	Pitx3	ENSMUST00000098801.2|Crxos1|ENSMUSG00000074365.7|Crx opposite strand transcript 1 	ENSMUST00000150050.2|Crxos1|ENSMUSG00000074365.7|Crx opposite strand transcript 1
mm10_v2_chrY_-_78035714_78035714	0.126263	Pitx3	ENSMUST00000178749.1|Gm21658|ENSMUSG00000095090.1|predicted gene, 21658
mm10_v2_chr9_-_113708209_113708259	0.125837	Pitx3	ENSMUST00000111861.3|Pdcd6ip|ENSMUSG00000032504.9|programmed cell death 6 interacting protein 	ENSMUST00000035086.6|Pdcd6ip|ENSMUSG00000032504.9|programmed cell death 6 interacting protein
mm10_v2_chr17_+_24549950_24550062	0.124864	Pitx3	ENSMUST00000035565.3|Pkd1|ENSMUSG00000032855.5|polycystic kidney disease 1 homolog
mm10_v2_chr13_+_77708683_77708740	0.122051	Pitx3	ENSMUST00000163257.1|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A 	ENSMUST00000091459.4|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A 	ENSMUST00000099358.3|Fam172a|ENSMUSG00000064138.7|family with sequence similarity 172, member A
mm10_v2_chr14_-_79390666_79390778	0.120145	Pitx3	ENSMUST00000022597.7|Naa16|ENSMUSG00000022020.8|N(alpha)-acetyltransferase 16, NatA auxiliary subunit
mm10_v2_chr2_-_156007919_156007977	0.117304	Pitx3	ENSMUST00000086145.3|6430550D23Rik|ENSMUSG00000074646.4|RIKEN cDNA 6430550D23 gene 	ENSMUST00000144686.1|6430550D23Rik|ENSMUSG00000074646.4|RIKEN cDNA 6430550D23 gene 	ENSMUST00000140657.1|6430550D23Rik|ENSMUSG00000074646.4|RIKEN cDNA 6430550D23 gene
mm10_v2_chr2_-_112259281_112259312	0.117254	Pitx3	ENSMUST00000043970.1|Nutm1|ENSMUSG00000041358.1|NUT midline carcinoma, family member 1
mm10_v2_chr13_+_112467504_112467593	0.115389	Pitx3	ENSMUST00000183868.1|Il6st|ENSMUSG00000021756.6|interleukin 6 signal transducer
mm10_v2_chr1_-_158980452_158980469	0.11163	Pitx3	ENSMUST00000062159.2|1600012P17Rik|ENSMUSG00000047661.3|RIKEN cDNA 1600012P17 gene
mm10_v2_chr6_+_47920476_47920636	0.107541	Pitx3	ENSMUST00000009411.8|Zfp212|ENSMUSG00000052763.7|Zinc finger protein 212
mm10_v2_chr11_+_66957894_66957918	0.104519	Pitx3	ENSMUST00000127166.1|9130409J20Rik|ENSMUSG00000085683.1|RIKEN cDNA 9130409J20 gene
mm10_v2_chr19_+_6334979_6335070	0.103788	Pitx3	ENSMUST00000113504.3|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000113502.3|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000079327.5|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000056391.8|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000113501.1|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000113500.1|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1 	ENSMUST00000166909.1|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1
mm10_v2_chr13_-_21468474_21468508	0.103214	Pitx3	ENSMUST00000068235.4|Nkapl|ENSMUSG00000059395.3|NFKB activating protein-like
mm10_v2_chrY_-_79149787_79149787	0.103165	Pitx3	ENSMUST00000179922.1|Gm20917|ENSMUSG00000095867.1|predicted gene, 20917
mm10_v2_chr9_-_70038075_70038093	0.101185	Pitx3	ENSMUST00000034751.5|Gcnt3|ENSMUSG00000032226.5|glucosaminyl (N-acetyl) transferase 3, mucin type
mm10_v2_chr5_+_112326352_112326492	0.0997925	Pitx3	ENSMUST00000031288.7|Tfip11|ENSMUSG00000029345.7|tuftelin interacting protein 11 	ENSMUST00000129528.1|Tfip11|ENSMUSG00000029345.7|tuftelin interacting protein 11
mm10_v2_chrY_+_21242966_21242966	0.099641	Pitx3	ENSMUST00000179095.1|Gm20865|ENSMUSG00000093848.2|predicted gene, 20865
mm10_v2_chr1_-_55027473_55027484	0.0995209	Pitx3	ENSMUST00000027127.7|Sf3b1|ENSMUSG00000025982.7|splicing factor 3b, subunit 1
mm10_v2_chr2_-_93822537_93822581	0.0971975	Pitx3	ENSMUST00000111248.1|Ext2|ENSMUSG00000027198.10|exostoses (multiple) 2 	ENSMUST00000184931.1|Ext2|ENSMUSG00000027198.10|exostoses (multiple) 2 	ENSMUST00000145838.1|Ext2|ENSMUSG00000027198.10|exostoses (multiple) 2 	ENSMUST00000028623.6|Ext2|ENSMUSG00000027198.10|exostoses (multiple) 2
mm10_v2_chr7_-_16285454_16285536	0.0959547	Pitx3	ENSMUST00000174270.1|Ccdc9|ENSMUSG00000041375.12|coiled-coil domain containing 9
mm10_v2_chr15_+_102407144_102407269	0.0958168	Pitx3	ENSMUST00000169619.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr2_-_76360447_76360463	0.0950983	Pitx3	ENSMUST00000028430.5|Cyct|ENSMUSG00000056436.4|cytochrome c, testis
mm10_v2_chr16_+_32271468_32271523	0.0941401	Pitx3	ENSMUST00000093183.3|Smco1|ENSMUSG00000046345.4|single-pass membrane protein with coiled-coil domains 1
mm10_v2_chr2_-_118256929_118256973	0.092776	Pitx3	ENSMUST00000028820.6|Fsip1|ENSMUSG00000027344.7|fibrous sheath-interacting protein 1 	ENSMUST00000028821.3|Fsip1|ENSMUSG00000027344.7|fibrous sheath-interacting protein 1
mm10_v2_chr13_-_118387224_118387275	0.0924353	Pitx3	ENSMUST00000022245.8|Mrps30|ENSMUSG00000021731.9|mitochondrial ribosomal protein S30
mm10_v2_chr13_+_84404839_84404839	0.0881959	Pitx3	ENSMUST00000170980.1|Gm17618|ENSMUSG00000091767.1|predicted gene, 17618
mm10_v2_chr3_-_36053512_36053547	0.085814	Pitx3	ENSMUST00000166644.2|Ccdc144b|ENSMUSG00000047696.10|coiled-coil domain containing 144B 	ENSMUST00000062056.8|Ccdc144b|ENSMUSG00000047696.10|coiled-coil domain containing 144B
mm10_v2_chr4_-_101981049_101981049	0.0848855	Pitx3	ENSMUST00000106916.1|Gm12790|ENSMUSG00000078626.2|predicted gene 12790
mm10_v2_chr15_+_80287234_80287252	0.0844708	Pitx3	ENSMUST00000160424.1|Cacna1i|ENSMUSG00000022416.9|calcium channel, voltage-dependent, alpha 1I subunit
mm10_v2_chr10_+_84622365_84622437	0.0844043	Pitx3	ENSMUST00000077175.5|Polr3b|ENSMUSG00000034453.7|polymerase (RNA) III (DNA directed) polypeptide B
mm10_v2_chr2_+_69722797_69722840	0.0843932	Pitx3	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr13_-_54468805_54468862	0.0809933	Pitx3	ENSMUST00000026990.5|Thoc3|ENSMUSG00000025872.5|THO complex 3
mm10_v2_chr2_+_61711694_61711786	0.0782127	Pitx3	ENSMUST00000028278.7|Psmd14|ENSMUSG00000026914.9|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
mm10_v2_chrY_+_25995644_25995644	0.0778728	Pitx3	ENSMUST00000179070.1|Gm21443|ENSMUSG00000095439.1|predicted gene, 21443
mm10_v2_chr1_+_60909148_60909171	0.0750467	Pitx3	ENSMUST00000097720.3|Ctla4|ENSMUSG00000026011.7|cytotoxic T-lymphocyte-associated protein 4
mm10_v2_chr2_-_164071089_164071118	0.0743938	Pitx3	ENSMUST00000018466.3|Tomm34|ENSMUSG00000018322.4|translocase of outer mitochondrial membrane 34
mm10_v2_chrY_-_84489780_84489780	0.0727753	Pitx3	ENSMUST00000179727.1|Gm21782|ENSMUSG00000095688.1|predicted gene, 21782
mm10_v2_chr4_+_49631999_49632010	0.0693669	Pitx3	ENSMUST00000140341.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20
mm10_v2_chrX_+_7697131_7697187	0.0667702	Pitx3	ENSMUST00000049896.6|Gpkow|ENSMUSG00000031148.8|G patch domain and KOW motifs
mm10_v2_chr15_+_81663889_81663958	0.0642544	Pitx3	ENSMUST00000023029.8|L3mbtl2|ENSMUSG00000022394.8|l(3)mbt-like 2 (Drosophila) 	ENSMUST00000174229.1|L3mbtl2|ENSMUSG00000022394.8|l(3)mbt-like 2 (Drosophila) 	ENSMUST00000172748.1|L3mbtl2|ENSMUSG00000022394.8|l(3)mbt-like 2 (Drosophila)
mm10_v2_chr10_+_42502030_42502041	0.0640254	Pitx3	ENSMUST00000105500.1|Snx3|ENSMUSG00000019804.6|sorting nexin 3 	ENSMUST00000019939.5|Snx3|ENSMUSG00000019804.6|sorting nexin 3
mm10_v2_chr5_-_142905816_142905832	0.0639966	Pitx3	ENSMUST00000171419.1|Actb|ENSMUSG00000029580.8|actin, beta
mm10_v2_chr9_-_78489141_78489166	0.0623159	Pitx3	ENSMUST00000154207.1|Eef1a1|ENSMUSG00000037742.8|eukaryotic translation elongation factor 1 alpha 1
mm10_v2_chr10_+_81384457_81384507	0.0617527	Pitx3	ENSMUST00000142346.1|Dohh|ENSMUSG00000078440.3|deoxyhypusine hydroxylase/monooxygenase
mm10_v2_chr15_+_59315030_59315087	0.0601122	Pitx3	ENSMUST00000022977.7|Sqle|ENSMUSG00000022351.8|squalene epoxidase
mm10_v2_chr5_-_21055880_21055961	0.05688	Pitx3	ENSMUST00000030556.7|Ptpn12|ENSMUSG00000028771.7|protein tyrosine phosphatase, non-receptor type 12
mm10_v2_chr5_+_117133567_117133649	0.0566403	Pitx3	ENSMUST00000179276.1|Taok3|ENSMUSG00000061288.7|TAO kinase 3 	ENSMUST00000092889.5|Taok3|ENSMUSG00000061288.7|TAO kinase 3 	ENSMUST00000145640.1|Taok3|ENSMUSG00000061288.7|TAO kinase 3
mm10_v2_chr4_-_101265236_101265282	0.0560108	Pitx3	ENSMUST00000149297.1|Jak1|ENSMUSG00000028530.8|Janus kinase 1 	ENSMUST00000102781.3|Jak1|ENSMUSG00000028530.8|Janus kinase 1
mm10_v2_chr19_+_6335093_6335113	0.0557316	Pitx3	ENSMUST00000078137.5|Men1|ENSMUSG00000024947.10|multiple endocrine neoplasia 1
mm10_v2_chr11_-_116274197_116274217	0.0553527	Pitx3	ENSMUST00000021133.9|Srp68|ENSMUSG00000020780.9|signal recognition particle 68
mm10_v2_chr5_-_136986829_136986901	0.0517236	Pitx3	ENSMUST00000034953.7|Znhit1|ENSMUSG00000059518.8|zinc finger, HIT domain containing 1 	ENSMUST00000085941.5|Znhit1|ENSMUSG00000059518.8|zinc finger, HIT domain containing 1
mm10_v2_chr11_-_84069179_84069261	0.0512083	Pitx3	ENSMUST00000138208.1|Dusp14|ENSMUSG00000018648.9|dual specificity phosphatase 14
mm10_v2_chr16_+_20517000_20517072	0.0471266	Pitx3	ENSMUST00000171572.1|Dvl3|ENSMUSG00000003233.5|dishevelled 3, dsh homolog (Drosophila)
mm10_v2_chr15_+_81987835_81987848	0.0433923	Pitx3	ENSMUST00000165777.1|Xrcc6|ENSMUSG00000022471.7|X-ray repair complementing defective repair in Chinese hamster cells 6
mm10_v2_chr18_-_36726730_36726745	0.0405295	Pitx3	ENSMUST00000061829.6|Cd14|ENSMUSG00000051439.6|CD14 antigen
mm10_v2_chrX_-_103623704_103623762	0.0376392	Pitx3	ENSMUST00000130063.1|Ftx|ENSMUSG00000086370.2|Ftx transcript, Xist regulator (non-protein coding) 	ENSMUST00000125419.1|Ftx|ENSMUSG00000086370.2|Ftx transcript, Xist regulator (non-protein coding)
mm10_v2_chr5_-_75044562_75044774	0.0364454	Pitx3	ENSMUST00000075452.5|Chic2|ENSMUSG00000029229.7|cysteine-rich hydrophobic domain 2
mm10_v2_chr5_+_15516489_15516489	0.034149	Pitx3	ENSMUST00000178227.1|Gm21847|ENSMUSG00000094230.1|predicted gene, 21847
mm10_v2_chr2_+_151542483_151542646	0.0276124	Pitx3	ENSMUST00000044011.5|Fkbp1a|ENSMUSG00000032966.8|FK506 binding protein 1a
mm10_v2_chr2_-_25214616_25214637	0.0274606	Pitx3	ENSMUST00000043774.4|4933433C11Rik|ENSMUSG00000036770.5|RIKEN cDNA 4933433C11 gene 	ENSMUST00000114363.1|4933433C11Rik|ENSMUSG00000036770.5|RIKEN cDNA 4933433C11 gene
mm10_v2_chr17_-_51831884_51832019	0.0273431	Pitx3	ENSMUST00000124222.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr5_-_123572976_123573031	0.0234557	Pitx3	ENSMUST00000031388.8|Vps33a|ENSMUSG00000029434.8|vacuolar protein sorting 33A (yeast)
mm10_v2_chr10_+_111164794_111164811	0.0212317	Pitx3	ENSMUST00000105275.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8 	ENSMUST00000095310.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8
mm10_v2_chr4_+_146502027_146502027	0.0210136	Pitx3	ENSMUST00000105735.2|Gm13247|ENSMUSG00000056300.8|predicted gene 13247
mm10_v2_chr1_-_130452416_130452530	0.0195081	Pitx3	ENSMUST00000140400.1|Cd55|ENSMUSG00000026399.6|CD55 antigen
mm10_v2_chr7_+_75701965_75702014	0.0192048	Pitx3	ENSMUST00000094307.3|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr3_-_146108047_146108130	0.0186175	Pitx3	ENSMUST00000160285.1|Wdr63|ENSMUSG00000043020.7|WD repeat domain 63
mm10_v2_chr12_-_52028063_52028063	0.0173634	Pitx3	ENSMUST00000040161.4|Gpr33|ENSMUSG00000035148.4|G protein-coupled receptor 33
mm10_v2_chr10_+_31248140_31248140	0.017112	Pitx3	ENSMUST00000050717.8|Gm5422|ENSMUSG00000039684.8|predicted pseudogene 5422
mm10_v2_chr5_-_145166956_145167028	0.0120992	Pitx3	ENSMUST00000161390.1|Ptcd1|ENSMUSG00000029624.10|pentatricopeptide repeat domain 1
mm10_v2_chr4_-_132463873_132463929	0.00623732	Pitx3	ENSMUST00000102567.3|Med18|ENSMUSG00000066042.4|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)
mm10_v2_chr4_-_58009117_58009133	0.00510568	Pitx3	ENSMUST00000102897.3|Txndc8|ENSMUSG00000038709.8|thioredoxin domain containing 8
mm10_v2_chr14_+_53032902_53032902	0.00321612	Pitx3	ENSMUST00000179512.1|Trav13d-3|ENSMUSG00000095643.1|T cell receptor alpha variable 13D-3
