mm10_v2_chr7_-_142661858_142661880	26.0346	Hoxd11_Cdx1_Hoxc11	ENSMUST00000145896.2|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr2_+_84988194_84988215	14.2599	Hoxd11_Cdx1_Hoxc11	ENSMUST00000028466.5|Prg3|ENSMUSG00000027072.7|proteoglycan 3
mm10_v2_chr14_-_37110087_37110106	9.21996	Hoxd11_Cdx1_Hoxc11	ENSMUST00000179488.1|2610528A11Rik|ENSMUSG00000096001.1|RIKEN cDNA 2610528A11 gene
mm10_v2_chrX_+_96455359_96455411	8.47018	Hoxd11_Cdx1_Hoxc11	ENSMUST00000033553.7|Heph|ENSMUSG00000031209.8|hephaestin
mm10_v2_chr1_+_107535508_107535508	7.94448	Hoxd11_Cdx1_Hoxc11	ENSMUST00000182198.1|Serpinb10|ENSMUSG00000098034.1|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10
mm10_v2_chr19_-_45812291_45812307	6.76805	Hoxd11_Cdx1_Hoxc11	ENSMUST00000086993.4|Kcnip2|ENSMUSG00000025221.9|Kv channel-interacting protein 2
mm10_v2_chr17_+_5799491_5799614	6.43954	Hoxd11_Cdx1_Hoxc11	ENSMUST00000181484.1|3300005D01Rik|ENSMUSG00000096965.1|RIKEN cDNA 3300005D01 gene
mm10_v2_chr1_-_45503282_45503282	6.33798	Hoxd11_Cdx1_Hoxc11	ENSMUST00000086430.4|Col5a2|ENSMUSG00000026042.10|collagen, type V, alpha 2
mm10_v2_chr2_+_155611175_155611216	5.9044	Hoxd11_Cdx1_Hoxc11	ENSMUST00000092995.5|Myh7b|ENSMUSG00000074652.3|myosin, heavy chain 7B, cardiac muscle, beta
mm10_v2_chr9_+_62858085_62858138	5.6383	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034777.6|Calml4|ENSMUSG00000032246.7|calmodulin-like 4 	ENSMUST00000163820.1|Calml4|ENSMUSG00000032246.7|calmodulin-like 4
mm10_v2_chrX_+_106920618_106920632	5.32108	Hoxd11_Cdx1_Hoxc11	ENSMUST00000060576.7|Lpar4|ENSMUSG00000049929.7|lysophosphatidic acid receptor 4
mm10_v2_chr1_-_89933290_89933290	5.31905	Hoxd11_Cdx1_Hoxc11	ENSMUST00000036954.7|Gbx2|ENSMUSG00000034486.7|gastrulation brain homeobox 2
mm10_v2_chr10_+_119992916_119992958	5.2534	Hoxd11_Cdx1_Hoxc11	ENSMUST00000105261.2|Grip1|ENSMUSG00000034813.10|glutamate receptor interacting protein 1
mm10_v2_chr10_+_45577811_45577914	5.17103	Hoxd11_Cdx1_Hoxc11	ENSMUST00000037044.6|Hace1|ENSMUSG00000038822.9|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1
mm10_v2_chr17_-_43502773_43502812	5.09107	Hoxd11_Cdx1_Hoxc11	ENSMUST00000024707.8|Mep1a|ENSMUSG00000023914.10|meprin 1 alpha 	ENSMUST00000117137.1|Mep1a|ENSMUSG00000023914.10|meprin 1 alpha
mm10_v2_chr17_+_71019548_71019568	5.06744	Hoxd11_Cdx1_Hoxc11	ENSMUST00000073211.5|Myom1|ENSMUSG00000024049.8|myomesin 1 	ENSMUST00000179759.1|Myom1|ENSMUSG00000024049.8|myomesin 1
mm10_v2_chr9_+_65890237_65890343	4.71695	Hoxd11_Cdx1_Hoxc11	ENSMUST00000045802.6|2810417H13Rik|ENSMUSG00000040204.6|RIKEN cDNA 2810417H13 gene
mm10_v2_chr17_+_71019503_71019523	4.6982	Hoxd11_Cdx1_Hoxc11	ENSMUST00000024847.7|Myom1|ENSMUSG00000024049.8|myomesin 1
mm10_v2_chr4_-_133968611_133968650	4.43479	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102552.1|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2
mm10_v2_chr3_-_123034943_123034995	4.4306	Hoxd11_Cdx1_Hoxc11	ENSMUST00000029761.7|Myoz2|ENSMUSG00000028116.7|myozenin 2
mm10_v2_chr15_+_81936753_81936839	4.38013	Hoxd11_Cdx1_Hoxc11	ENSMUST00000038757.7|Csdc2|ENSMUSG00000042109.7|cold shock domain containing C2, RNA binding
mm10_v2_chr15_-_78855517_78855536	4.37882	Hoxd11_Cdx1_Hoxc11	ENSMUST00000044584.4|Lgals2|ENSMUSG00000043501.4|lectin, galactose-binding, soluble 2
mm10_v2_chr5_-_73191848_73191922	4.35086	Hoxd11_Cdx1_Hoxc11	ENSMUST00000176910.1|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr19_+_53529100_53529109	4.31019	Hoxd11_Cdx1_Hoxc11	ENSMUST00000038287.6|Dusp5|ENSMUSG00000034765.6|dual specificity phosphatase 5
mm10_v2_chr4_+_11758147_11758220	4.21624	Hoxd11_Cdx1_Hoxc11	ENSMUST00000029871.5|Cdh17|ENSMUSG00000028217.5|cadherin 17 	ENSMUST00000108303.1|Cdh17|ENSMUSG00000028217.5|cadherin 17
mm10_v2_chr14_+_74640840_74640887	4.08741	Hoxd11_Cdx1_Hoxc11	ENSMUST00000036653.3|Htr2a|ENSMUSG00000034997.4|5-hydroxytryptamine (serotonin) receptor 2A
mm10_v2_chr1_-_163289214_163289235	4.08407	Hoxd11_Cdx1_Hoxc11	ENSMUST00000183691.1|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1
mm10_v2_chrX_+_164140447_164140495	4.07322	Hoxd11_Cdx1_Hoxc11	ENSMUST00000073973.4|Ace2|ENSMUSG00000015405.9|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2
mm10_v2_chr4_-_154636831_154636873	3.97273	Hoxd11_Cdx1_Hoxc11	ENSMUST00000030902.6|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105637.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000070313.7|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105636.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105638.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000097759.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000124771.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16
mm10_v2_chr11_-_99244058_99244136	3.93225	Hoxd11_Cdx1_Hoxc11	ENSMUST00000103132.3|Krt222|ENSMUSG00000035849.8|keratin 222 	ENSMUST00000038214.6|Krt222|ENSMUSG00000035849.8|keratin 222
mm10_v2_chr1_+_63176818_63176919	3.91546	Hoxd11_Cdx1_Hoxc11	ENSMUST00000129339.1|Eef1b2|ENSMUSG00000025967.10|eukaryotic translation elongation factor 1 beta 2
mm10_v2_chr7_-_134232005_134232054	3.89139	Hoxd11_Cdx1_Hoxc11	ENSMUST00000134504.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr15_+_81936911_81936982	3.84614	Hoxd11_Cdx1_Hoxc11	ENSMUST00000135663.1|Csdc2|ENSMUSG00000042109.7|cold shock domain containing C2, RNA binding
mm10_v2_chr13_-_84064772_84064808	3.74807	Hoxd11_Cdx1_Hoxc11	ENSMUST00000182477.1|Gm17750|ENSMUSG00000098087.1|predicted gene, 17750
mm10_v2_chr6_-_52226165_52226196	3.61684	Hoxd11_Cdx1_Hoxc11	ENSMUST00000114425.2|Hoxa9|ENSMUSG00000038227.9|homeobox A9
mm10_v2_chr17_+_5799616_5799652	3.59979	Hoxd11_Cdx1_Hoxc11	ENSMUST00000181392.1|3300005D01Rik|ENSMUSG00000096965.1|RIKEN cDNA 3300005D01 gene
mm10_v2_chr7_-_134232125_134232146	3.4502	Hoxd11_Cdx1_Hoxc11	ENSMUST00000127524.1|Adam12|ENSMUSG00000054555.5|a disintegrin and metallopeptidase domain 12 (meltrin alpha)
mm10_v2_chr6_-_139501907_139501918	3.41349	Hoxd11_Cdx1_Hoxc11	ENSMUST00000170650.1|Rergl|ENSMUSG00000092164.1|RERG/RAS-like
mm10_v2_chr5_-_73256555_73256636	3.3339	Hoxd11_Cdx1_Hoxc11	ENSMUST00000171179.1|Fryl|ENSMUSG00000090491.1|furry homolog-like (Drosophila) 	ENSMUST00000101127.5|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr19_-_7341792_7341829	3.20723	Hoxd11_Cdx1_Hoxc11	ENSMUST00000164205.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000165286.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000168324.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2 	ENSMUST00000032557.8|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr8_+_69902178_69902194	3.18592	Hoxd11_Cdx1_Hoxc11	ENSMUST00000050373.5|Tssk6|ENSMUSG00000047654.5|testis-specific serine kinase 6
mm10_v2_chr4_-_133967296_133967441	3.1472	Hoxd11_Cdx1_Hoxc11	ENSMUST00000105893.1|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2
mm10_v2_chr3_-_144760841_144760868	3.13378	Hoxd11_Cdx1_Hoxc11	ENSMUST00000059091.5|Clca1|ENSMUSG00000056025.6|chloride channel calcium activated 1
mm10_v2_chr14_+_65805832_65805846	3.07511	Hoxd11_Cdx1_Hoxc11	ENSMUST00000022612.3|Pbk|ENSMUSG00000022033.3|PDZ binding kinase
mm10_v2_chr2_-_32387760_32387797	3.06671	Hoxd11_Cdx1_Hoxc11	ENSMUST00000050785.8|Lcn2|ENSMUSG00000026822.9|lipocalin 2
mm10_v2_chr8_+_57332111_57332131	3.06629	Hoxd11_Cdx1_Hoxc11	ENSMUST00000181638.1|5033428I22Rik|ENSMUSG00000097910.1|RIKEN cDNA 5033428I22 gene
mm10_v2_chr14_+_65806066_65806232	3.04764	Hoxd11_Cdx1_Hoxc11	ENSMUST00000139644.1|Pbk|ENSMUSG00000022033.3|PDZ binding kinase
mm10_v2_chr9_-_39604124_39604403	3.01438	Hoxd11_Cdx1_Hoxc11	ENSMUST00000042485.4|AW551984|ENSMUSG00000038112.9|expressed sequence AW551984 	ENSMUST00000141370.1|AW551984|ENSMUSG00000038112.9|expressed sequence AW551984
mm10_v2_chr19_-_7341848_7341863	2.91857	Hoxd11_Cdx1_Hoxc11	ENSMUST00000171393.1|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr16_+_26463135_26463256	2.89722	Hoxd11_Cdx1_Hoxc11	ENSMUST00000161053.1|Cldn16|ENSMUSG00000038148.7|claudin 16 	ENSMUST00000115302.1|Cldn16|ENSMUSG00000038148.7|claudin 16
mm10_v2_chr9_+_43310763_43310806	2.76341	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034511.5|Trim29|ENSMUSG00000032013.5|tripartite motif-containing 29
mm10_v2_chr3_-_144819494_144819494	2.75107	Hoxd11_Cdx1_Hoxc11	ENSMUST00000029929.7|Clca2|ENSMUSG00000028262.9|chloride channel calcium activated 2
mm10_v2_chr11_+_96323253_96323326	2.73251	Hoxd11_Cdx1_Hoxc11	ENSMUST00000093944.3|Hoxb3|ENSMUSG00000048763.5|homeobox B3
mm10_v2_chr9_-_42124276_42124333	2.72369	Hoxd11_Cdx1_Hoxc11	ENSMUST00000060989.8|Sorl1|ENSMUSG00000049313.8|sortilin-related receptor, LDLR class A repeats-containing
mm10_v2_chr14_+_34053466_34053473	2.7118	Hoxd11_Cdx1_Hoxc11	ENSMUST00000058725.3|Antxrl|ENSMUSG00000047441.3|anthrax toxin receptor-like
mm10_v2_chr5_-_24030649_24030707	2.70068	Hoxd11_Cdx1_Hoxc11	ENSMUST00000030849.6|Fam126a|ENSMUSG00000028995.8|family with sequence similarity 126, member A
mm10_v2_chr4_-_88033328_88033373	2.69774	Hoxd11_Cdx1_Hoxc11	ENSMUST00000078090.5|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr18_-_32036941_32037019	2.69659	Hoxd11_Cdx1_Hoxc11	ENSMUST00000134663.1|Myo7b|ENSMUSG00000024388.10|myosin VIIB
mm10_v2_chr14_+_26894557_26894604	2.66553	Hoxd11_Cdx1_Hoxc11	ENSMUST00000090337.4|Asb14|ENSMUSG00000021898.8|ankyrin repeat and SOCS box-containing 14 	ENSMUST00000165929.2|Asb14|ENSMUSG00000021898.8|ankyrin repeat and SOCS box-containing 14
mm10_v2_chr8_+_57455898_57455923	2.64959	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034023.3|Scrg1|ENSMUSG00000031610.3|scrapie responsive gene 1
mm10_v2_chr9_-_123678873_123678885	2.64198	Hoxd11_Cdx1_Hoxc11	ENSMUST00000040960.6|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A
mm10_v2_chr15_+_85510812_85510812	2.5983	Hoxd11_Cdx1_Hoxc11	ENSMUST00000079690.2|Gm4825|ENSMUSG00000063548.2|predicted pseudogene 4825
mm10_v2_chr4_-_136602641_136602760	2.50508	Hoxd11_Cdx1_Hoxc11	ENSMUST00000105847.1|Kdm1a|ENSMUSG00000036940.9|lysine (K)-specific demethylase 1A 	ENSMUST00000116273.2|Kdm1a|ENSMUSG00000036940.9|lysine (K)-specific demethylase 1A
mm10_v2_chr3_+_122044428_122044469	2.45269	Hoxd11_Cdx1_Hoxc11	ENSMUST00000013995.8|Abca4|ENSMUSG00000028125.8|ATP-binding cassette, sub-family A (ABC1), member 4
mm10_v2_chr15_-_79062866_79062941	2.45091	Hoxd11_Cdx1_Hoxc11	ENSMUST00000151889.1|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54 	ENSMUST00000040676.4|Ankrd54|ENSMUSG00000033055.4|ankyrin repeat domain 54
mm10_v2_chr9_-_123678782_123678850	2.44954	Hoxd11_Cdx1_Hoxc11	ENSMUST00000170591.1|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A 	ENSMUST00000171647.1|Slc6a20a|ENSMUSG00000036814.6|solute carrier family 6 (neurotransmitter transporter), member 20A
mm10_v2_chr19_+_60755947_60755987	2.4268	Hoxd11_Cdx1_Hoxc11	ENSMUST00000088237.4|Nanos1|ENSMUSG00000072437.3|nanos homolog 1 (Drosophila)
mm10_v2_chr7_+_25306085_25306157	2.41855	Hoxd11_Cdx1_Hoxc11	ENSMUST00000119703.1|Tmem145|ENSMUSG00000043843.10|transmembrane protein 145 	ENSMUST00000108409.1|Tmem145|ENSMUSG00000043843.10|transmembrane protein 145
mm10_v2_chr11_-_120549695_120549728	2.40284	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034913.4|Fam195b|ENSMUSG00000061111.8|family with sequence similarity 195, member B
mm10_v2_chr10_-_13324160_13324242	2.35119	Hoxd11_Cdx1_Hoxc11	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr18_-_15063560_15063617	2.32823	Hoxd11_Cdx1_Hoxc11	ENSMUST00000168989.1|Kctd1|ENSMUSG00000036225.8|potassium channel tetramerisation domain containing 1
mm10_v2_chr18_+_21072329_21072351	2.29996	Hoxd11_Cdx1_Hoxc11	ENSMUST00000082235.4|Mep1b|ENSMUSG00000024313.7|meprin 1 beta
mm10_v2_chr7_+_66109474_66109515	2.28493	Hoxd11_Cdx1_Hoxc11	ENSMUST00000036372.6|Chsy1|ENSMUSG00000032640.9|chondroitin sulfate synthase 1
mm10_v2_chrX_+_56447965_56447965	2.24671	Hoxd11_Cdx1_Hoxc11	ENSMUST00000079663.6|Gm2174|ENSMUSG00000058932.6|predicted gene 2174
mm10_v2_chr16_-_76022266_76022287	2.23017	Hoxd11_Cdx1_Hoxc11	ENSMUST00000114240.1|Samsn1|ENSMUSG00000022876.11|SAM domain, SH3 domain and nuclear localization signals, 1
mm10_v2_chr17_-_35074485_35074500	2.22343	Hoxd11_Cdx1_Hoxc11	ENSMUST00000007259.3|Ly6g6d|ENSMUSG00000073413.3|lymphocyte antigen 6 complex, locus G6D
mm10_v2_chr11_+_96316684_96316684	2.11171	Hoxd11_Cdx1_Hoxc11	ENSMUST00000049241.7|Hoxb4|ENSMUSG00000038692.7|homeobox B4
mm10_v2_chr3_+_84666192_84666288	2.10117	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107682.1|Tmem154|ENSMUSG00000056498.7|transmembrane protein 154
mm10_v2_chr9_+_110763646_110763702	2.09283	Hoxd11_Cdx1_Hoxc11	ENSMUST00000079784.7|Myl3|ENSMUSG00000059741.7|myosin, light polypeptide 3
mm10_v2_chr6_-_83536215_83536265	2.05766	Hoxd11_Cdx1_Hoxc11	ENSMUST00000075161.5|Actg2|ENSMUSG00000059430.8|actin, gamma 2, smooth muscle, enteric
mm10_v2_chr10_+_37139558_37139558	2.04121	Hoxd11_Cdx1_Hoxc11	ENSMUST00000062667.3|5930403N24Rik|ENSMUSG00000046463.3|RIKEN cDNA 5930403N24 gene
mm10_v2_chr15_-_101491509_101491514	2.01379	Hoxd11_Cdx1_Hoxc11	ENSMUST00000023718.7|5430421N21Rik|ENSMUSG00000067613.5|RIKEN cDNA 5430421N21 gene
mm10_v2_chrX_+_153139941_153140011	1.96743	Hoxd11_Cdx1_Hoxc11	ENSMUST00000039720.4|Rragb|ENSMUSG00000041658.6|Ras-related GTP binding B 	ENSMUST00000144175.2|Rragb|ENSMUSG00000041658.6|Ras-related GTP binding B
mm10_v2_chr10_+_69787431_69787458	1.96579	Hoxd11_Cdx1_Hoxc11	ENSMUST00000183240.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr7_-_135528645_135528661	1.95666	Hoxd11_Cdx1_Hoxc11	ENSMUST00000053716.7|Clrn3|ENSMUSG00000050866.7|clarin 3
mm10_v2_chr16_+_10812915_10812915	1.92979	Hoxd11_Cdx1_Hoxc11	ENSMUST00000115822.1|Gm11172|ENSMUSG00000079740.1|predicted gene 11172
mm10_v2_chr11_-_109472611_109472688	1.91549	Hoxd11_Cdx1_Hoxc11	ENSMUST00000168740.1|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr11_-_17008647_17008702	1.91379	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102881.3|Plek|ENSMUSG00000020120.9|pleckstrin
mm10_v2_chr4_+_5724304_5724357	1.86126	Hoxd11_Cdx1_Hoxc11	ENSMUST00000108380.1|Fam110b|ENSMUSG00000049119.8|family with sequence similarity 110, member B
mm10_v2_chr7_-_30612731_30612744	1.8189	Hoxd11_Cdx1_Hoxc11	ENSMUST00000006476.4|Upk1a|ENSMUSG00000006313.4|uroplakin 1A
mm10_v2_chr2_-_84822546_84822652	1.81249	Hoxd11_Cdx1_Hoxc11	ENSMUST00000028471.5|Smtnl1|ENSMUSG00000027077.7|smoothelin-like 1
mm10_v2_chr7_+_131032061_131032076	1.79318	Hoxd11_Cdx1_Hoxc11	ENSMUST00000084509.3|Dmbt1|ENSMUSG00000047517.9|deleted in malignant brain tumors 1
mm10_v2_chr17_-_78906899_78906992	1.76032	Hoxd11_Cdx1_Hoxc11	ENSMUST00000042683.6|Sult6b1|ENSMUSG00000038045.8|sulfotransferase family, cytosolic, 6B, member 1 	ENSMUST00000169544.1|Sult6b1|ENSMUSG00000038045.8|sulfotransferase family, cytosolic, 6B, member 1
mm10_v2_chr16_+_37011758_37011791	1.75761	Hoxd11_Cdx1_Hoxc11	ENSMUST00000071452.5|Polq|ENSMUSG00000034206.9|polymerase (DNA directed), theta 	ENSMUST00000054034.6|Polq|ENSMUSG00000034206.9|polymerase (DNA directed), theta
mm10_v2_chr6_-_87981482_87981622	1.74302	Hoxd11_Cdx1_Hoxc11	ENSMUST00000056403.5|H1fx|ENSMUSG00000044927.5|H1 histone family, member X
mm10_v2_chr17_-_70998010_70998013	1.73152	Hoxd11_Cdx1_Hoxc11	ENSMUST00000024846.6|Myl12a|ENSMUSG00000024048.8|myosin, light chain 12A, regulatory, non-sarcomeric
mm10_v2_chr14_+_56042123_56042123	1.71697	Hoxd11_Cdx1_Hoxc11	ENSMUST00000015576.4|Mcpt2|ENSMUSG00000022226.5|mast cell protease 2
mm10_v2_chr11_+_29463735_29463888	1.69346	Hoxd11_Cdx1_Hoxc11	ENSMUST00000155854.1|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A
mm10_v2_chr6_-_52218686_52218716	1.68909	Hoxd11_Cdx1_Hoxc11	ENSMUST00000134367.2|Hoxa7|ENSMUSG00000038236.6|homeobox A7
mm10_v2_chr6_-_12749193_12749253	1.67901	Hoxd11_Cdx1_Hoxc11	ENSMUST00000046121.6|Thsd7a|ENSMUSG00000032625.8|thrombospondin, type I, domain containing 7A 	ENSMUST00000172356.1|Thsd7a|ENSMUSG00000032625.8|thrombospondin, type I, domain containing 7A
mm10_v2_chr6_-_13839916_13839942	1.67726	Hoxd11_Cdx1_Hoxc11	ENSMUST00000060442.7|Gpr85|ENSMUSG00000048216.7|G protein-coupled receptor 85
mm10_v2_chr2_+_57997884_57997884	1.65252	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112616.1|Galnt5|ENSMUSG00000026828.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 	ENSMUST00000166729.1|Galnt5|ENSMUSG00000026828.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5
mm10_v2_chr4_-_64046925_64047015	1.64716	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107377.3|Tnc|ENSMUSG00000028364.9|tenascin C
mm10_v2_chr10_+_116177351_116177417	1.63681	Hoxd11_Cdx1_Hoxc11	ENSMUST00000155606.1|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R 	ENSMUST00000128399.1|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr1_-_172027251_172027268	1.54447	Hoxd11_Cdx1_Hoxc11	ENSMUST00000138714.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr9_-_64172879_64172918	1.5188	Hoxd11_Cdx1_Hoxc11	ENSMUST00000176299.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000130127.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000176794.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein 	ENSMUST00000177045.1|Zwilch|ENSMUSG00000032400.11|zwilch kinetochore protein
mm10_v2_chr6_+_125552948_125552980	1.49885	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112254.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000112253.1|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog 	ENSMUST00000001995.7|Vwf|ENSMUSG00000001930.11|Von Willebrand factor homolog
mm10_v2_chr10_-_30655859_30655868	1.49448	Hoxd11_Cdx1_Hoxc11	ENSMUST00000092610.4|Ncoa7|ENSMUSG00000039697.9|nuclear receptor coactivator 7
mm10_v2_chr18_-_6490808_6490869	1.49061	Hoxd11_Cdx1_Hoxc11	ENSMUST00000028100.6|Epc1|ENSMUSG00000024240.7|enhancer of polycomb homolog 1 (Drosophila) 	ENSMUST00000050542.5|Epc1|ENSMUSG00000024240.7|enhancer of polycomb homolog 1 (Drosophila)
mm10_v2_chr3_-_49757257_49757316	1.47753	Hoxd11_Cdx1_Hoxc11	ENSMUST00000035931.7|Pcdh18|ENSMUSG00000037892.8|protocadherin 18
mm10_v2_chr2_-_170194033_170194064	1.47485	Hoxd11_Cdx1_Hoxc11	ENSMUST00000180625.1|Gm17619|ENSMUSG00000097514.1|predicted gene, 17619
mm10_v2_chr6_-_122340499_122340510	1.4643	Hoxd11_Cdx1_Hoxc11	ENSMUST00000160843.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr19_+_33822908_33822908	1.44397	Hoxd11_Cdx1_Hoxc11	ENSMUST00000042061.6|Gm5519|ENSMUSG00000037603.6|predicted pseudogene 5519
mm10_v2_chr6_-_122340525_122340561	1.43265	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112600.2|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr17_-_51826562_51826601	1.41534	Hoxd11_Cdx1_Hoxc11	ENSMUST00000024720.4|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000129667.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000156051.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000169480.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1 	ENSMUST00000148559.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr8_-_57653023_57653039	1.39682	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034021.5|Galnt7|ENSMUSG00000031608.7|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
mm10_v2_chr17_+_80307396_80307413	1.38459	Hoxd11_Cdx1_Hoxc11	ENSMUST00000068175.5|Arhgef33|ENSMUSG00000054901.5|Rho guanine nucleotide exchange factor (GEF) 33
mm10_v2_chr4_-_133967893_133967951	1.35601	Hoxd11_Cdx1_Hoxc11	ENSMUST00000100472.3|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2 	ENSMUST00000136327.1|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2
mm10_v2_chr2_-_114013619_114013638	1.32488	Hoxd11_Cdx1_Hoxc11	ENSMUST00000090275.4|Gjd2|ENSMUSG00000068615.4|gap junction protein, delta 2
mm10_v2_chr19_-_50678642_50678702	1.29385	Hoxd11_Cdx1_Hoxc11	ENSMUST00000072685.6|Sorcs1|ENSMUSG00000043531.9|VPS10 domain receptor protein SORCS 1 	ENSMUST00000164039.2|Sorcs1|ENSMUSG00000043531.9|VPS10 domain receptor protein SORCS 1
mm10_v2_chr8_+_25720054_25720099	1.29363	Hoxd11_Cdx1_Hoxc11	ENSMUST00000068916.8|Ppapdc1b|ENSMUSG00000031570.10|phosphatidic acid phosphatase type 2 domain containing 1B 	ENSMUST00000139836.1|Ppapdc1b|ENSMUSG00000031570.10|phosphatidic acid phosphatase type 2 domain containing 1B
mm10_v2_chr13_+_19214103_19214103	1.28977	Hoxd11_Cdx1_Hoxc11	ENSMUST00000103558.1|Tcrg-C1|ENSMUSG00000076749.1|T cell receptor gamma, constant 1
mm10_v2_chr4_-_11981265_11981265	1.26369	Hoxd11_Cdx1_Hoxc11	ENSMUST00000098260.2|Gm10604|ENSMUSG00000073995.2|predicted gene 10604
mm10_v2_chr8_+_121116163_121116177	1.25967	Hoxd11_Cdx1_Hoxc11	ENSMUST00000054691.6|Foxc2|ENSMUSG00000046714.6|forkhead box C2
mm10_v2_chr6_-_24168083_24168097	1.25661	Hoxd11_Cdx1_Hoxc11	ENSMUST00000031713.8|Slc13a1|ENSMUSG00000029700.11|solute carrier family 13 (sodium/sulfate symporters), member 1
mm10_v2_chrX_+_56779437_56779565	1.23909	Hoxd11_Cdx1_Hoxc11	ENSMUST00000114773.3|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr7_+_46861203_46861245	1.22957	Hoxd11_Cdx1_Hoxc11	ENSMUST00000014545.4|Ldhc|ENSMUSG00000030851.7|lactate dehydrogenase C
mm10_v2_chr18_+_69593361_69593450	1.2287	Hoxd11_Cdx1_Hoxc11	ENSMUST00000114978.2|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114977.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr1_-_152625212_152625220	1.2262	Hoxd11_Cdx1_Hoxc11	ENSMUST00000027760.7|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr18_-_62756275_62756347	1.21028	Hoxd11_Cdx1_Hoxc11	ENSMUST00000067450.1|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene 	ENSMUST00000048109.5|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene
mm10_v2_chr16_-_56795823_56795899	1.19452	Hoxd11_Cdx1_Hoxc11	ENSMUST00000023437.4|Gpr128|ENSMUSG00000022755.4|G protein-coupled receptor 128
mm10_v2_chr14_+_76504185_76504249	1.17631	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177207.1|Tsc22d1|ENSMUSG00000022010.13|TSC22 domain family, member 1
mm10_v2_chr1_-_128328311_128328326	1.15101	Hoxd11_Cdx1_Hoxc11	ENSMUST00000073490.6|Lct|ENSMUSG00000026354.8|lactase
mm10_v2_chr18_-_47333311_47333373	1.14138	Hoxd11_Cdx1_Hoxc11	ENSMUST00000126684.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000156422.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr8_+_57320975_57320992	1.14032	Hoxd11_Cdx1_Hoxc11	ENSMUST00000040104.3|Hand2|ENSMUSG00000038193.3|heart and neural crest derivatives expressed transcript 2
mm10_v2_chr14_+_20674311_20674371	1.11564	Hoxd11_Cdx1_Hoxc11	ENSMUST00000048657.8|Sec24c|ENSMUSG00000039367.9|Sec24 related gene family, member C (S. cerevisiae)
mm10_v2_chr1_+_58646608_58646608	1.10946	Hoxd11_Cdx1_Hoxc11	ENSMUST00000081455.4|Gm10068|ENSMUSG00000059647.4|predicted gene 10068
mm10_v2_chr3_-_89960562_89960629	1.10763	Hoxd11_Cdx1_Hoxc11	ENSMUST00000069805.7|Atp8b2|ENSMUSG00000060671.6|ATPase, class I, type 8B, member 2
mm10_v2_chr1_-_128102412_128102485	1.10391	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112538.1|Zranb3|ENSMUSG00000036086.10|zinc finger, RAN-binding domain containing 3 	ENSMUST00000086614.5|Zranb3|ENSMUSG00000036086.10|zinc finger, RAN-binding domain containing 3
mm10_v2_chrX_-_74246534_74246556	1.09713	Hoxd11_Cdx1_Hoxc11	ENSMUST00000101454.2|Flna|ENSMUSG00000031328.9|filamin, alpha 	ENSMUST00000033699.6|Flna|ENSMUSG00000031328.9|filamin, alpha
mm10_v2_chr4_-_133967953_133968005	1.08271	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102553.4|Hmgn2|ENSMUSG00000003038.9|high mobility group nucleosomal binding domain 2
mm10_v2_chr1_-_175688353_175688353	1.07383	Hoxd11_Cdx1_Hoxc11	ENSMUST00000104984.1|Chml|ENSMUSG00000078185.1|choroideremia-like
mm10_v2_chr5_+_137641334_137641437	1.04568	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177466.1|Sap25|ENSMUSG00000079165.4|sin3 associated polypeptide 	ENSMUST00000166099.2|Sap25|ENSMUSG00000079165.4|sin3 associated polypeptide
mm10_v2_chr13_-_58354862_58354862	1.03639	Hoxd11_Cdx1_Hoxc11	ENSMUST00000043605.5|Kif27|ENSMUSG00000060176.3|kinesin family member 27
mm10_v2_chr15_-_34356421_34356421	1.02844	Hoxd11_Cdx1_Hoxc11	ENSMUST00000179647.1|9430069I07Rik|ENSMUSG00000094447.1|RIKEN cDNA 9430069I07 gene
mm10_v2_chrX_+_13632769_13632798	0.993252	Hoxd11_Cdx1_Hoxc11	ENSMUST00000096492.3|Gpr34|ENSMUSG00000040229.5|G protein-coupled receptor 34
mm10_v2_chr11_-_19018956_19018973	0.985935	Hoxd11_Cdx1_Hoxc11	ENSMUST00000068264.7|Meis1|ENSMUSG00000020160.12|Meis homeobox 1 	ENSMUST00000144988.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1 	ENSMUST00000185131.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1
mm10_v2_chr14_-_106101157_106101189	0.962868	Hoxd11_Cdx1_Hoxc11	ENSMUST00000169588.1|Gm4775|ENSMUSG00000090538.1|predicted gene 4775
mm10_v2_chr1_-_37496095_37496156	0.951653	Hoxd11_Cdx1_Hoxc11	ENSMUST00000148047.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A 	ENSMUST00000143636.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm10_v2_chr11_-_19018714_19018828	0.922939	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177417.1|Meis1|ENSMUSG00000020160.12|Meis homeobox 1
mm10_v2_chr2_-_140671462_140671476	0.903431	Hoxd11_Cdx1_Hoxc11	ENSMUST00000110057.2|Flrt3|ENSMUSG00000051379.6|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr15_-_42676967_42676978	0.900116	Hoxd11_Cdx1_Hoxc11	ENSMUST00000022921.5|Angpt1|ENSMUSG00000022309.8|angiopoietin 1
mm10_v2_chr11_-_100105626_100105645	0.898614	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107416.2|Krt36|ENSMUSG00000020916.8|keratin 36
mm10_v2_chr2_+_36230426_36230491	0.863815	Hoxd11_Cdx1_Hoxc11	ENSMUST00000062069.5|Ptgs1|ENSMUSG00000047250.7|prostaglandin-endoperoxide synthase 1
mm10_v2_chr15_+_11000716_11000736	0.860124	Hoxd11_Cdx1_Hoxc11	ENSMUST00000117100.1|Slc45a2|ENSMUSG00000022243.8|solute carrier family 45, member 2 	ENSMUST00000022851.7|Slc45a2|ENSMUSG00000022243.8|solute carrier family 45, member 2
mm10_v2_chr17_+_35059035_35059130	0.851967	Hoxd11_Cdx1_Hoxc11	ENSMUST00000007255.6|Ddah2|ENSMUSG00000007039.6|dimethylarginine dimethylaminohydrolase 2 	ENSMUST00000174493.1|Ddah2|ENSMUSG00000007039.6|dimethylarginine dimethylaminohydrolase 2
mm10_v2_chr1_-_172027269_172027313	0.841464	Hoxd11_Cdx1_Hoxc11	ENSMUST00000027837.6|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila) 	ENSMUST00000111264.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr15_+_100761741_100761797	0.829183	Hoxd11_Cdx1_Hoxc11	ENSMUST00000023776.6|Slc4a8|ENSMUSG00000023032.6|solute carrier family 4 (anion exchanger), member 8
mm10_v2_chr9_-_21067093_21067093	0.828986	Hoxd11_Cdx1_Hoxc11	ENSMUST00000115494.2|Zglp1|ENSMUSG00000079681.2|zinc finger, GATA-like protein 1
mm10_v2_chr6_-_145047725_145047853	0.826233	Hoxd11_Cdx1_Hoxc11	ENSMUST00000123930.1|Bcat1|ENSMUSG00000030268.11|branched chain aminotransferase 1, cytosolic
mm10_v2_chr6_+_125215551_125215591	0.822743	Hoxd11_Cdx1_Hoxc11	ENSMUST00000032487.7|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1 	ENSMUST00000100942.2|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1 	ENSMUST00000063588.8|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1
mm10_v2_chr8_+_15057646_15057660	0.807463	Hoxd11_Cdx1_Hoxc11	ENSMUST00000033842.3|Myom2|ENSMUSG00000031461.4|myomesin 2
mm10_v2_chr1_-_176807124_176807124	0.786889	Hoxd11_Cdx1_Hoxc11	ENSMUST00000057037.7|Cep170|ENSMUSG00000057335.6|centrosomal protein 170
mm10_v2_chr11_-_97700327_97700497	0.78523	Hoxd11_Cdx1_Hoxc11	ENSMUST00000018681.7|Pcgf2|ENSMUSG00000018537.10|polycomb group ring finger 2
mm10_v2_chrY_-_79667079_79667079	0.775191	Hoxd11_Cdx1_Hoxc11	ENSMUST00000178903.1|Gm21242|ENSMUSG00000095114.1|predicted gene, 21242
mm10_v2_chr3_-_63851251_63851359	0.774643	Hoxd11_Cdx1_Hoxc11	ENSMUST00000162269.2|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000159676.2|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1 	ENSMUST00000175947.1|Plch1|ENSMUSG00000036834.10|phospholipase C, eta 1
mm10_v2_chr15_-_98934522_98934586	0.767352	Hoxd11_Cdx1_Hoxc11	ENSMUST00000077577.7|Tuba1b|ENSMUSG00000023004.8|tubulin, alpha 1B
mm10_v2_chr15_+_6422240_6422327	0.76668	Hoxd11_Cdx1_Hoxc11	ENSMUST00000163082.1|Dab2|ENSMUSG00000022150.10|disabled 2, mitogen-responsive phosphoprotein
mm10_v2_chr10_+_116177217_116177258	0.754916	Hoxd11_Cdx1_Hoxc11	ENSMUST00000148731.1|Ptprr|ENSMUSG00000020151.10|protein tyrosine phosphatase, receptor type, R
mm10_v2_chr2_-_140671400_140671427	0.752547	Hoxd11_Cdx1_Hoxc11	ENSMUST00000056760.3|Flrt3|ENSMUSG00000051379.6|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr11_-_109473220_109473294	0.731427	Hoxd11_Cdx1_Hoxc11	ENSMUST00000070872.6|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr1_-_144249134_144249242	0.712777	Hoxd11_Cdx1_Hoxc11	ENSMUST00000172388.1|Rgs1|ENSMUSG00000026358.7|regulator of G-protein signaling 1
mm10_v2_chr8_-_47352348_47352367	0.704632	Hoxd11_Cdx1_Hoxc11	ENSMUST00000110367.2|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chr4_+_136284708_136284775	0.703348	Hoxd11_Cdx1_Hoxc11	ENSMUST00000130223.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr3_-_89349968_89350001	0.698051	Hoxd11_Cdx1_Hoxc11	ENSMUST00000074582.6|Adam15|ENSMUSG00000028041.11|a disintegrin and metallopeptidase domain 15 (metargidin) 	ENSMUST00000107448.2|Adam15|ENSMUSG00000028041.11|a disintegrin and metallopeptidase domain 15 (metargidin) 	ENSMUST00000029676.5|Adam15|ENSMUSG00000028041.11|a disintegrin and metallopeptidase domain 15 (metargidin)
mm10_v2_chr17_-_15826521_15826590	0.693956	Hoxd11_Cdx1_Hoxc11	ENSMUST00000170578.1|Rgmb|ENSMUSG00000048027.7|RGM domain family, member B
mm10_v2_chr1_+_164048214_164048234	0.691343	Hoxd11_Cdx1_Hoxc11	ENSMUST00000027874.5|Sele|ENSMUSG00000026582.6|selectin, endothelial cell
mm10_v2_chr11_+_98026918_98026931	0.690031	Hoxd11_Cdx1_Hoxc11	ENSMUST00000017548.6|Rpl19|ENSMUSG00000017404.6|ribosomal protein L19
mm10_v2_chr11_+_96282529_96282556	0.672353	Hoxd11_Cdx1_Hoxc11	ENSMUST00000125410.1|Hoxb8|ENSMUSG00000056648.4|homeobox B8
mm10_v2_chr3_-_87768966_87768975	0.661374	Hoxd11_Cdx1_Hoxc11	ENSMUST00000174776.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1
mm10_v2_chr11_+_96282648_96282725	0.648852	Hoxd11_Cdx1_Hoxc11	ENSMUST00000168043.1|Hoxb8|ENSMUSG00000056648.4|homeobox B8
mm10_v2_chr16_+_45224315_45224346	0.642696	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102802.3|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated 	ENSMUST00000063654.4|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated
mm10_v2_chrX_+_150547375_150547459	0.641584	Hoxd11_Cdx1_Hoxc11	ENSMUST00000066337.6|Alas2|ENSMUSG00000025270.7|aminolevulinic acid synthase 2, erythroid 	ENSMUST00000112715.1|Alas2|ENSMUSG00000025270.7|aminolevulinic acid synthase 2, erythroid
mm10_v2_chr3_-_19265007_19265023	0.641352	Hoxd11_Cdx1_Hoxc11	ENSMUST00000091314.4|Pde7a|ENSMUSG00000069094.6|phosphodiesterase 7A
mm10_v2_chr6_-_132957919_132957919	0.63991	Hoxd11_Cdx1_Hoxc11	ENSMUST00000082085.4|Tas2r131|ENSMUSG00000057699.5|taste receptor, type 2, member 131
mm10_v2_chr6_-_52234902_52234960	0.639344	Hoxd11_Cdx1_Hoxc11	ENSMUST00000125581.1|Hoxa10|ENSMUSG00000000938.11|homeobox A10
mm10_v2_chr2_-_45112890_45113010	0.634645	Hoxd11_Cdx1_Hoxc11	ENSMUST00000076836.6|Zeb2|ENSMUSG00000026872.10|zinc finger E-box binding homeobox 2
mm10_v2_chr2_-_27463994_27464116	0.633879	Hoxd11_Cdx1_Hoxc11	ENSMUST00000164296.1|Brd3|ENSMUSG00000026918.10|bromodomain containing 3
mm10_v2_chr3_-_89349939_89349959	0.631747	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107446.1|Adam15|ENSMUSG00000028041.11|a disintegrin and metallopeptidase domain 15 (metargidin)
mm10_v2_chr7_-_119459266_119459280	0.629968	Hoxd11_Cdx1_Hoxc11	ENSMUST00000033255.5|Gp2|ENSMUSG00000030954.9|glycoprotein 2 (zymogen granule membrane)
mm10_v2_chr5_+_31054766_31054811	0.623507	Hoxd11_Cdx1_Hoxc11	ENSMUST00000013773.5|Cad|ENSMUSG00000013629.10|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 	ENSMUST00000114646.1|Cad|ENSMUSG00000013629.10|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
mm10_v2_chrX_-_12673540_12673668	0.60522	Hoxd11_Cdx1_Hoxc11	ENSMUST00000060108.6|1810030O07Rik|ENSMUSG00000044148.6|RIKEN cDNA 1810030O07 gene
mm10_v2_chr3_+_3634145_3634161	0.604221	Hoxd11_Cdx1_Hoxc11	ENSMUST00000108394.1|Hnf4g|ENSMUSG00000017688.8|hepatocyte nuclear factor 4, gamma
mm10_v2_chr6_-_87335758_87335775	0.602048	Hoxd11_Cdx1_Hoxc11	ENSMUST00000042025.9|Antxr1|ENSMUSG00000033420.10|anthrax toxin receptor 1
mm10_v2_chr4_+_108479081_108479224	0.596949	Hoxd11_Cdx1_Hoxc11	ENSMUST00000155068.1|Zcchc11|ENSMUSG00000034610.8|zinc finger, CCHC domain containing 11
mm10_v2_chr13_-_101692624_101692647	0.592834	Hoxd11_Cdx1_Hoxc11	ENSMUST00000035532.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chrX_+_111168340_111168340	0.588344	Hoxd11_Cdx1_Hoxc11	ENSMUST00000075226.4|Gm10112|ENSMUSG00000062226.4|predicted pseudogene 10112
mm10_v2_chr5_+_150259922_150259936	0.587903	Hoxd11_Cdx1_Hoxc11	ENSMUST00000087204.5|Fry|ENSMUSG00000056602.8|furry homolog (Drosophila)
mm10_v2_chr1_-_120270253_120270423	0.587672	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112639.1|Steap3|ENSMUSG00000026389.10|STEAP family member 3
mm10_v2_chr11_-_100146120_100146120	0.586316	Hoxd11_Cdx1_Hoxc11	ENSMUST00000007317.7|Krt19|ENSMUSG00000020911.8|keratin 19
mm10_v2_chr18_-_20682963_20683006	0.585867	Hoxd11_Cdx1_Hoxc11	ENSMUST00000165229.2|Gm10269|ENSMUSG00000091449.2|predicted gene 10269
mm10_v2_chr3_+_134236483_134236500	0.576932	Hoxd11_Cdx1_Hoxc11	ENSMUST00000181904.1|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4 	ENSMUST00000053048.9|Cxxc4|ENSMUSG00000044365.10|CXXC finger 4
mm10_v2_chr18_+_33464163_33464163	0.567893	Hoxd11_Cdx1_Hoxc11	ENSMUST00000097634.3|Gm10549|ENSMUSG00000073610.3|predicted gene 10549
mm10_v2_chr7_-_19677941_19677952	0.559796	Hoxd11_Cdx1_Hoxc11	ENSMUST00000142352.1|Apoc2|ENSMUSG00000002992.10|apolipoprotein C-II
mm10_v2_chr3_+_103074009_103074033	0.559749	Hoxd11_Cdx1_Hoxc11	ENSMUST00000090715.6|Ampd1|ENSMUSG00000070385.6|adenosine monophosphate deaminase 1
mm10_v2_chr9_-_8042785_8042882	0.556013	Hoxd11_Cdx1_Hoxc11	ENSMUST00000065291.1|9230110C19Rik|ENSMUSG00000053070.4|RIKEN cDNA 9230110C19 gene
mm10_v2_chr8_+_124023394_124023394	0.547517	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034457.8|Urb2|ENSMUSG00000031976.8|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
mm10_v2_chr3_-_37724321_37724490	0.546986	Hoxd11_Cdx1_Hoxc11	ENSMUST00000108105.1|Gm5148|ENSMUSG00000058174.7|predicted gene 5148 	ENSMUST00000079755.4|Gm5148|ENSMUSG00000058174.7|predicted gene 5148 	ENSMUST00000099128.1|Gm5148|ENSMUSG00000058174.7|predicted gene 5148
mm10_v2_chr5_+_31054821_31054955	0.546702	Hoxd11_Cdx1_Hoxc11	ENSMUST00000174367.1|Cad|ENSMUSG00000013629.10|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 	ENSMUST00000170329.1|Cad|ENSMUSG00000013629.10|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 	ENSMUST00000031049.6|Cad|ENSMUSG00000013629.10|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
mm10_v2_chr1_+_159737510_159737510	0.543447	Hoxd11_Cdx1_Hoxc11	ENSMUST00000111669.3|Tnr|ENSMUSG00000015829.8|tenascin R
mm10_v2_chr4_+_105789869_105789869	0.543188	Hoxd11_Cdx1_Hoxc11	ENSMUST00000184254.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr6_-_145047636_145047661	0.535039	Hoxd11_Cdx1_Hoxc11	ENSMUST00000149769.1|Bcat1|ENSMUSG00000030268.11|branched chain aminotransferase 1, cytosolic
mm10_v2_chr19_-_56548013_56548046	0.53411	Hoxd11_Cdx1_Hoxc11	ENSMUST00000182059.1|Dclre1a|ENSMUSG00000025077.7|DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae)
mm10_v2_chr10_+_5593718_5593739	0.520048	Hoxd11_Cdx1_Hoxc11	ENSMUST00000051809.8|Myct1|ENSMUSG00000046916.8|myc target 1
mm10_v2_chr1_+_166130238_166130424	0.507106	Hoxd11_Cdx1_Hoxc11	ENSMUST00000060833.7|Gpa33|ENSMUSG00000000544.8|glycoprotein A33 (transmembrane) 	ENSMUST00000166159.1|Gpa33|ENSMUSG00000000544.8|glycoprotein A33 (transmembrane)
mm10_v2_chr17_-_71475285_71475343	0.501603	Hoxd11_Cdx1_Hoxc11	ENSMUST00000127430.1|Smchd1|ENSMUSG00000024054.7|SMC hinge domain containing 1
mm10_v2_chr19_+_29951808_29951819	0.492013	Hoxd11_Cdx1_Hoxc11	ENSMUST00000136850.1|Il33|ENSMUSG00000024810.10|interleukin 33
mm10_v2_chr17_-_31129602_31129646	0.487661	Hoxd11_Cdx1_Hoxc11	ENSMUST00000024827.4|Tff3|ENSMUSG00000024029.4|trefoil factor 3, intestinal
mm10_v2_chr19_-_56548122_56548222	0.487012	Hoxd11_Cdx1_Hoxc11	ENSMUST00000026063.5|Dclre1a|ENSMUSG00000025077.7|DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae) 	ENSMUST00000182276.1|Dclre1a|ENSMUSG00000025077.7|DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae)
mm10_v2_chr6_+_30610984_30611026	0.485842	Hoxd11_Cdx1_Hoxc11	ENSMUST00000062758.4|Cpa5|ENSMUSG00000029788.7|carboxypeptidase A5
mm10_v2_chr7_-_27181149_27181162	0.480139	Hoxd11_Cdx1_Hoxc11	ENSMUST00000071986.6|Mia|ENSMUSG00000089661.3|melanoma inhibitory activity 	ENSMUST00000121848.1|Mia|ENSMUSG00000089661.3|melanoma inhibitory activity
mm10_v2_chr12_+_105453831_105453919	0.475379	Hoxd11_Cdx1_Hoxc11	ENSMUST00000178224.1|D430019H16Rik|ENSMUSG00000094910.1|RIKEN cDNA D430019H16 gene
mm10_v2_chr10_+_26822560_26822602	0.471207	Hoxd11_Cdx1_Hoxc11	ENSMUST00000135866.1|Arhgap18|ENSMUSG00000039031.9|Rho GTPase activating protein 18
mm10_v2_chr7_-_34230281_34230308	0.467976	Hoxd11_Cdx1_Hoxc11	ENSMUST00000038027.4|Gpi1|ENSMUSG00000036427.4|glucose phosphate isomerase 1
mm10_v2_chr1_+_166130467_166130479	0.456857	Hoxd11_Cdx1_Hoxc11	ENSMUST00000166860.1|Gpa33|ENSMUSG00000000544.8|glycoprotein A33 (transmembrane)
mm10_v2_chr8_-_62123106_62123123	0.452645	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034052.6|Anxa10|ENSMUSG00000031635.7|annexin A10 	ENSMUST00000034054.7|Anxa10|ENSMUSG00000031635.7|annexin A10
mm10_v2_chr14_-_20496780_20496901	0.449892	Hoxd11_Cdx1_Hoxc11	ENSMUST00000022353.3|Mss51|ENSMUSG00000021815.3|MSS51 mitochondrial translational activator
mm10_v2_chr4_+_105790534_105790534	0.449841	Hoxd11_Cdx1_Hoxc11	ENSMUST00000185012.1|Gm12728|ENSMUSG00000083780.2|predicted gene 12728
mm10_v2_chr14_+_105681824_105681831	0.445072	Hoxd11_Cdx1_Hoxc11	ENSMUST00000073238.6|Gm10076|ENSMUSG00000060143.6|predicted gene 10076
mm10_v2_chr4_-_141825997_141826160	0.444041	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102481.3|Cela2a|ENSMUSG00000058579.5|chymotrypsin-like elastase family, member 2A
mm10_v2_chr2_-_103283760_103283802	0.443489	Hoxd11_Cdx1_Hoxc11	ENSMUST00000111174.1|Ehf|ENSMUSG00000012350.9|ets homologous factor
mm10_v2_chr11_-_43601540_43601567	0.440793	Hoxd11_Cdx1_Hoxc11	ENSMUST00000020672.4|Fabp6|ENSMUSG00000020405.4|fatty acid binding protein 6, ileal (gastrotropin)
mm10_v2_chr1_+_12692430_12692485	0.433673	Hoxd11_Cdx1_Hoxc11	ENSMUST00000180062.1|Sulf1|ENSMUSG00000016918.9|sulfatase 1 	ENSMUST00000177608.1|Sulf1|ENSMUSG00000016918.9|sulfatase 1
mm10_v2_chrY_-_56020480_56020480	0.430138	Hoxd11_Cdx1_Hoxc11	ENSMUST00000179829.1|Gm21340|ENSMUSG00000093888.1|predicted gene, 21340
mm10_v2_chr4_-_47057296_47057356	0.425681	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107747.1|Anks6|ENSMUSG00000066191.5|ankyrin repeat and sterile alpha motif domain containing 6 	ENSMUST00000084616.2|Anks6|ENSMUSG00000066191.5|ankyrin repeat and sterile alpha motif domain containing 6
mm10_v2_chr1_+_89454769_89454885	0.421047	Hoxd11_Cdx1_Hoxc11	ENSMUST00000027521.8|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 	ENSMUST00000074945.5|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm10_v2_chr15_-_81104999_81105083	0.419623	Hoxd11_Cdx1_Hoxc11	ENSMUST00000109579.2|Mkl1|ENSMUSG00000042292.10|MKL (megakaryoblastic leukemia)/myocardin-like 1
mm10_v2_chr1_+_137928100_137928170	0.417585	Hoxd11_Cdx1_Hoxc11	ENSMUST00000054333.2|A130050O07Rik|ENSMUSG00000051480.2|RIKEN cDNA A130050O07 gene
mm10_v2_chr16_-_91728599_91728637	0.413454	Hoxd11_Cdx1_Hoxc11	ENSMUST00000122254.1|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chr19_+_47067721_47067768	0.401468	Hoxd11_Cdx1_Hoxc11	ENSMUST00000026027.5|Taf5|ENSMUSG00000025049.5|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chrX_-_7319291_7319358	0.398428	Hoxd11_Cdx1_Hoxc11	ENSMUST00000128319.1|Clcn5|ENSMUSG00000004317.8|chloride channel 5
mm10_v2_chr2_+_31759932_31759989	0.391281	Hoxd11_Cdx1_Hoxc11	ENSMUST00000028190.6|Abl1|ENSMUSG00000026842.10|c-abl oncogene 1, non-receptor tyrosine kinase
mm10_v2_chr9_-_8134294_8134364	0.390432	Hoxd11_Cdx1_Hoxc11	ENSMUST00000037397.6|AK129341|ENSMUSG00000040729.6|cDNA sequence AK129341
mm10_v2_chr17_+_27839974_27840119	0.37787	Hoxd11_Cdx1_Hoxc11	ENSMUST00000071006.7|Snrpc|ENSMUSG00000024217.9|U1 small nuclear ribonucleoprotein C
mm10_v2_chr3_+_10088173_10088173	0.375193	Hoxd11_Cdx1_Hoxc11	ENSMUST00000061419.7|Gm9833|ENSMUSG00000049230.7|predicted gene 9833
mm10_v2_chr6_+_78380700_78380715	0.373715	Hoxd11_Cdx1_Hoxc11	ENSMUST00000101272.1|Reg3a|ENSMUSG00000079516.1|regenerating islet-derived 3 alpha
mm10_v2_chr5_+_138187485_138187521	0.364629	Hoxd11_Cdx1_Hoxc11	ENSMUST00000110934.2|Cnpy4|ENSMUSG00000036968.9|canopy 4 homolog (zebrafish)
mm10_v2_chr4_+_136284658_136284686	0.362577	Hoxd11_Cdx1_Hoxc11	ENSMUST00000144217.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr3_-_72967854_72967869	0.360594	Hoxd11_Cdx1_Hoxc11	ENSMUST00000167334.1|Sis|ENSMUSG00000027790.8|sucrase isomaltase (alpha-glucosidase)
mm10_v2_chr2_-_116067391_116067444	0.359335	Hoxd11_Cdx1_Hoxc11	ENSMUST00000140185.1|2700033N17Rik|ENSMUSG00000086328.1|RIKEN cDNA 2700033N17 gene
mm10_v2_chr4_+_59035088_59035247	0.357198	Hoxd11_Cdx1_Hoxc11	ENSMUST00000041160.6|Gng10|ENSMUSG00000038607.6|guanine nucleotide binding protein (G protein), gamma 10
mm10_v2_chr11_+_74082907_74082907	0.354975	Hoxd11_Cdx1_Hoxc11	ENSMUST00000178159.1|Zfp616|ENSMUSG00000069476.7|zinc finger protein 616
mm10_v2_chr5_+_107497762_107497802	0.349469	Hoxd11_Cdx1_Hoxc11	ENSMUST00000152474.1|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene 	ENSMUST00000060553.7|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene
mm10_v2_chr6_+_95117740_95117880	0.346291	Hoxd11_Cdx1_Hoxc11	ENSMUST00000032107.7|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8 	ENSMUST00000119582.1|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8
mm10_v2_chr10_-_39122277_39122314	0.345426	Hoxd11_Cdx1_Hoxc11	ENSMUST00000136546.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
mm10_v2_chr1_+_106938953_106938958	0.344109	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112724.2|Serpinb12|ENSMUSG00000059956.8|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12
mm10_v2_chr16_-_4880284_4880315	0.336217	Hoxd11_Cdx1_Hoxc11	ENSMUST00000037843.6|Ubald1|ENSMUSG00000039568.6|UBA-like domain containing 1
mm10_v2_chr13_-_22035589_22035643	0.33617	Hoxd11_Cdx1_Hoxc11	ENSMUST00000091742.4|Hist1h2ah|ENSMUSG00000069302.4|histone cluster 1, H2ah
mm10_v2_chr5_+_90367204_90367204	0.336079	Hoxd11_Cdx1_Hoxc11	ENSMUST00000068250.3|Gm9958|ENSMUSG00000054945.3|predicted gene 9958
mm10_v2_chr5_-_6876523_6876523	0.334679	Hoxd11_Cdx1_Hoxc11	ENSMUST00000164784.1|Zfp804b|ENSMUSG00000092094.1|zinc finger protein 804B
mm10_v2_chr1_-_155099630_155099636	0.33194	Hoxd11_Cdx1_Hoxc11	ENSMUST00000055322.4|Ier5|ENSMUSG00000056708.4|immediate early response 5
mm10_v2_chr1_-_74194631_74194658	0.324504	Hoxd11_Cdx1_Hoxc11	ENSMUST00000053389.4|Cxcr1|ENSMUSG00000048480.4|chemokine (C-X-C motif) receptor 1
mm10_v2_chr2_-_31845925_31846005	0.319441	Hoxd11_Cdx1_Hoxc11	ENSMUST00000028188.7|Fibcd1|ENSMUSG00000026841.7|fibrinogen C domain containing 1
mm10_v2_chrY_+_17093879_17093879	0.317154	Hoxd11_Cdx1_Hoxc11	ENSMUST00000100105.4|Gm20877|ENSMUSG00000095520.1|predicted gene, 20877
mm10_v2_chr1_+_146420434_146420434	0.316102	Hoxd11_Cdx1_Hoxc11	ENSMUST00000163646.1|Gm5263|ENSMUSG00000090323.1|predicted gene 5263
mm10_v2_chr19_+_34100943_34100983	0.310311	Hoxd11_Cdx1_Hoxc11	ENSMUST00000025685.6|Lipm|ENSMUSG00000056078.5|lipase, family member M
mm10_v2_chr5_+_43515513_43515588	0.310258	Hoxd11_Cdx1_Hoxc11	ENSMUST00000167522.1|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7 	ENSMUST00000144558.1|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7 	ENSMUST00000076939.6|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7
mm10_v2_chr6_+_83086365_83086365	0.305542	Hoxd11_Cdx1_Hoxc11	ENSMUST00000041265.2|Lbx2|ENSMUSG00000034968.2|ladybird homeobox homolog 2 (Drosophila)
mm10_v2_chr3_+_108591279_108591414	0.305446	Hoxd11_Cdx1_Hoxc11	ENSMUST00000051145.8|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47 	ENSMUST00000139626.1|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47
mm10_v2_chr6_-_99044414_99044459	0.302086	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177507.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1 	ENSMUST00000123992.1|Foxp1|ENSMUSG00000030067.11|forkhead box P1
mm10_v2_chr17_+_38145393_38145393	0.294133	Hoxd11_Cdx1_Hoxc11	ENSMUST00000173610.1|Olfr133|ENSMUSG00000063240.4|olfactory receptor 133
mm10_v2_chr2_-_33086366_33086447	0.290874	Hoxd11_Cdx1_Hoxc11	ENSMUST00000049618.2|Garnl3|ENSMUSG00000038860.9|GTPase activating RANGAP domain-like 3
mm10_v2_chr7_-_31051431_31051488	0.2812	Hoxd11_Cdx1_Hoxc11	ENSMUST00000073892.4|Fxyd7|ENSMUSG00000036578.6|FXYD domain-containing ion transport regulator 7
mm10_v2_chr11_+_115933282_115933282	0.279039	Hoxd11_Cdx1_Hoxc11	ENSMUST00000140991.1|Sap30bp|ENSMUSG00000020755.3|SAP30 binding protein
mm10_v2_chr6_+_135065651_135065682	0.271438	Hoxd11_Cdx1_Hoxc11	ENSMUST00000050104.7|Gprc5a|ENSMUSG00000046733.7|G protein-coupled receptor, family C, group 5, member A
mm10_v2_chr9_+_109812280_109812300	0.263477	Hoxd11_Cdx1_Hoxc11	ENSMUST00000154663.1|Spink8|ENSMUSG00000050074.6|serine peptidase inhibitor, Kazal type 8
mm10_v2_chr19_+_56548254_56548283	0.261436	Hoxd11_Cdx1_Hoxc11	ENSMUST00000071423.5|Nhlrc2|ENSMUSG00000025078.8|NHL repeat containing 2
mm10_v2_chr16_-_91728701_91728802	0.256172	Hoxd11_Cdx1_Hoxc11	ENSMUST00000114023.2|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1 	ENSMUST00000117644.1|Cryzl1|ENSMUSG00000058240.7|crystallin, zeta (quinone reductase)-like 1
mm10_v2_chrY_-_57533726_57533726	0.255676	Hoxd11_Cdx1_Hoxc11	ENSMUST00000178181.1|Gm21943|ENSMUSG00000096122.1|predicted gene, 21943
mm10_v2_chr5_+_107497718_107497759	0.238204	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112671.2|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene
mm10_v2_chrX_-_75578188_75578247	0.237156	Hoxd11_Cdx1_Hoxc11	ENSMUST00000033545.5|Rab39b|ENSMUSG00000031202.5|RAB39B, member RAS oncogene family
mm10_v2_chr13_-_23622502_23622563	0.234496	Hoxd11_Cdx1_Hoxc11	ENSMUST00000062045.2|Hist1h1e|ENSMUSG00000051627.2|histone cluster 1, H1e
mm10_v2_chr10_-_105574435_105574451	0.230951	Hoxd11_Cdx1_Hoxc11	ENSMUST00000061506.8|Tmtc2|ENSMUSG00000036019.8|transmembrane and tetratricopeptide repeat containing 2
mm10_v2_chr11_-_102316691_102316708	0.226318	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107115.1|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I 	ENSMUST00000128016.1|Ubtf|ENSMUSG00000020923.11|upstream binding transcription factor, RNA polymerase I
mm10_v2_chr4_-_82850721_82850814	0.221366	Hoxd11_Cdx1_Hoxc11	ENSMUST00000139401.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr1_-_105659008_105659008	0.22117	Hoxd11_Cdx1_Hoxc11	ENSMUST00000070699.8|Pign|ENSMUSG00000056536.8|phosphatidylinositol glycan anchor biosynthesis, class N
mm10_v2_chr10_-_28986280_28986313	0.220231	Hoxd11_Cdx1_Hoxc11	ENSMUST00000152363.1|2310057J18Rik|ENSMUSG00000015519.6|RIKEN cDNA 2310057J18 gene 	ENSMUST00000015663.6|2310057J18Rik|ENSMUSG00000015519.6|RIKEN cDNA 2310057J18 gene
mm10_v2_chr17_-_9669668_9669705	0.21668	Hoxd11_Cdx1_Hoxc11	ENSMUST00000057190.2|Pabpc6|ENSMUSG00000046173.2|poly(A) binding protein, cytoplasmic 6
mm10_v2_chr2_-_79908389_79908403	0.216643	Hoxd11_Cdx1_Hoxc11	ENSMUST00000090756.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr2_+_71786923_71786978	0.2075	Hoxd11_Cdx1_Hoxc11	ENSMUST00000112101.1|Itga6|ENSMUSG00000027111.9|integrin alpha 6 	ENSMUST00000028522.3|Itga6|ENSMUSG00000027111.9|integrin alpha 6
mm10_v2_chr3_+_57425314_57425452	0.207107	Hoxd11_Cdx1_Hoxc11	ENSMUST00000029377.7|Tm4sf4|ENSMUSG00000027801.7|transmembrane 4 superfamily member 4
mm10_v2_chr3_-_87768932_87768960	0.200367	Hoxd11_Cdx1_Hoxc11	ENSMUST00000173184.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000172621.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000174759.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000172590.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000079083.5|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1
mm10_v2_chr11_-_79504078_79504089	0.199994	Hoxd11_Cdx1_Hoxc11	ENSMUST00000164465.2|Omg|ENSMUSG00000049612.10|oligodendrocyte myelin glycoprotein
mm10_v2_chr8_+_94137197_94137213	0.198534	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034207.6|Mt4|ENSMUSG00000031757.6|metallothionein 4
mm10_v2_chr1_-_74600564_74600622	0.197288	Hoxd11_Cdx1_Hoxc11	ENSMUST00000127938.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25 	ENSMUST00000154874.1|Rnf25|ENSMUSG00000026171.6|ring finger protein 25
mm10_v2_chr2_-_110950923_110950923	0.196207	Hoxd11_Cdx1_Hoxc11	ENSMUST00000099623.3|Ano3|ENSMUSG00000074968.5|anoctamin 3
mm10_v2_chr9_+_89199209_89199310	0.185835	Hoxd11_Cdx1_Hoxc11	ENSMUST00000068569.4|Bcl2a1b|ENSMUSG00000089929.1|B cell leukemia/lymphoma 2 related protein A1b
mm10_v2_chr2_-_140671440_140671458	0.184141	Hoxd11_Cdx1_Hoxc11	ENSMUST00000099301.1|Flrt3|ENSMUSG00000079021.1|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr3_+_96221111_96221134	0.177428	Hoxd11_Cdx1_Hoxc11	ENSMUST00000090781.6|Hist2h2be|ENSMUSG00000068854.6|histone cluster 2, H2be
mm10_v2_chr10_-_81364846_81364859	0.175544	Hoxd11_Cdx1_Hoxc11	ENSMUST00000131736.1|4930404N11Rik|ENSMUSG00000020234.4|RIKEN cDNA 4930404N11 gene
mm10_v2_chr4_-_137118135_137118165	0.16684	Hoxd11_Cdx1_Hoxc11	ENSMUST00000154285.1|Gm13001|ENSMUSG00000087417.1|predicted gene 13001
mm10_v2_chr10_+_5639210_5639225	0.164042	Hoxd11_Cdx1_Hoxc11	ENSMUST00000019906.4|Vip|ENSMUSG00000019772.4|vasoactive intestinal polypeptide
mm10_v2_chr15_-_101532819_101532824	0.162491	Hoxd11_Cdx1_Hoxc11	ENSMUST00000023720.7|Krt84|ENSMUSG00000044294.7|keratin 84
mm10_v2_chr8_+_92901387_92901411	0.16176	Hoxd11_Cdx1_Hoxc11	ENSMUST00000104947.2|Capns2|ENSMUSG00000078144.2|calpain, small subunit 2
mm10_v2_chr6_+_30611029_30611051	0.160125	Hoxd11_Cdx1_Hoxc11	ENSMUST00000115138.1|Cpa5|ENSMUSG00000029788.7|carboxypeptidase A5
mm10_v2_chr2_-_119208767_119208802	0.157166	Hoxd11_Cdx1_Hoxc11	ENSMUST00000038439.3|Dnajc17|ENSMUSG00000034278.3|DnaJ (Hsp40) homolog, subfamily C, member 17
mm10_v2_chr1_-_144177259_144177372	0.156026	Hoxd11_Cdx1_Hoxc11	ENSMUST00000111941.1|Rgs13|ENSMUSG00000051079.2|regulator of G-protein signaling 13 	ENSMUST00000052375.1|Rgs13|ENSMUSG00000051079.2|regulator of G-protein signaling 13
mm10_v2_chr7_+_45062429_45062505	0.149859	Hoxd11_Cdx1_Hoxc11	ENSMUST00000107830.1|Nosip|ENSMUSG00000003421.6|nitric oxide synthase interacting protein 	ENSMUST00000003513.3|Nosip|ENSMUSG00000003421.6|nitric oxide synthase interacting protein 	ENSMUST00000107829.1|Nosip|ENSMUSG00000003421.6|nitric oxide synthase interacting protein 	ENSMUST00000150609.1|Nosip|ENSMUSG00000003421.6|nitric oxide synthase interacting protein
mm10_v2_chr10_-_129160982_129160982	0.147627	Hoxd11_Cdx1_Hoxc11	ENSMUST00000078914.2|Olfr771|ENSMUSG00000061367.2|olfactory receptor 771
mm10_v2_chr14_+_47663756_47663756	0.147002	Hoxd11_Cdx1_Hoxc11	ENSMUST00000022391.7|Ktn1|ENSMUSG00000021843.10|kinectin 1
mm10_v2_chr10_-_25200110_25200178	0.146376	Hoxd11_Cdx1_Hoxc11	ENSMUST00000100012.2|Akap7|ENSMUSG00000039166.9|A kinase (PRKA) anchor protein 7
mm10_v2_chr10_+_90071095_90071117	0.146272	Hoxd11_Cdx1_Hoxc11	ENSMUST00000183109.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr2_-_18048347_18048449	0.146131	Hoxd11_Cdx1_Hoxc11	ENSMUST00000066885.5|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr18_-_42899470_42899643	0.144818	Hoxd11_Cdx1_Hoxc11	ENSMUST00000120632.1|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chr7_-_127208423_127208504	0.142927	Hoxd11_Cdx1_Hoxc11	ENSMUST00000120705.1|Tbc1d10b|ENSMUSG00000042492.6|TBC1 domain family, member 10b
mm10_v2_chr2_-_79908428_79908438	0.13315	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102652.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102651.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr2_-_71367749_71367797	0.126968	Hoxd11_Cdx1_Hoxc11	ENSMUST00000151937.1|Slc25a12|ENSMUSG00000027010.10|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm10_v2_chr19_-_40994133_40994148	0.123945	Hoxd11_Cdx1_Hoxc11	ENSMUST00000117695.1|Blnk|ENSMUSG00000061132.7|B cell linker
mm10_v2_chrX_-_43274786_43274786	0.122911	Hoxd11_Cdx1_Hoxc11	ENSMUST00000016294.7|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1
mm10_v2_chr15_-_82047579_82047610	0.120556	Hoxd11_Cdx1_Hoxc11	ENSMUST00000166578.1|Nhp2l1|ENSMUSG00000063480.7|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) 	ENSMUST00000080622.7|Nhp2l1|ENSMUSG00000063480.7|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
mm10_v2_chr7_+_90380646_90380646	0.11962	Hoxd11_Cdx1_Hoxc11	ENSMUST00000098310.2|Sytl2|ENSMUSG00000030616.8|synaptotagmin-like 2
mm10_v2_chr8_-_83458386_83458397	0.11919	Hoxd11_Cdx1_Hoxc11	ENSMUST00000081506.3|Scoc|ENSMUSG00000063253.4|short coiled-coil protein
mm10_v2_chr7_-_5014645_5014697	0.116472	Hoxd11_Cdx1_Hoxc11	ENSMUST00000165320.1|Fiz1|ENSMUSG00000061374.7|Flt3 interacting zinc finger protein 1
mm10_v2_chr7_-_100583072_100583124	0.115581	Hoxd11_Cdx1_Hoxc11	ENSMUST00000152876.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48 	ENSMUST00000150042.1|Mrpl48|ENSMUSG00000030706.10|mitochondrial ribosomal protein L48
mm10_v2_chr12_+_55836365_55836408	0.114825	Hoxd11_Cdx1_Hoxc11	ENSMUST00000059250.6|Brms1l|ENSMUSG00000012076.7|breast cancer metastasis-suppressor 1-like
mm10_v2_chr19_-_11017933_11017980	0.113298	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177684.1|Ms4a18|ENSMUSG00000094584.1|membrane-spanning 4-domains, subfamily A, member 18
mm10_v2_chr2_-_79456750_79456761	0.113178	Hoxd11_Cdx1_Hoxc11	ENSMUST00000041099.4|Neurod1|ENSMUSG00000034701.9|neurogenic differentiation 1
mm10_v2_chr5_+_17962621_17962621	0.110025	Hoxd11_Cdx1_Hoxc11	ENSMUST00000030561.7|Gnat3|ENSMUSG00000028777.7|guanine nucleotide binding protein, alpha transducing 3
mm10_v2_chr8_-_104293178_104293204	0.109988	Hoxd11_Cdx1_Hoxc11	ENSMUST00000034344.9|Cmtm2a|ENSMUSG00000074127.5|CKLF-like MARVEL transmembrane domain containing 2A
mm10_v2_chr2_+_110721587_110721619	0.0983924	Hoxd11_Cdx1_Hoxc11	ENSMUST00000111017.2|Muc15|ENSMUSG00000050808.7|mucin 15
mm10_v2_chr12_-_55302974_55303014	0.0973154	Hoxd11_Cdx1_Hoxc11	ENSMUST00000021410.8|Ppp2r3c|ENSMUSG00000021022.8|protein phosphatase 2, regulatory subunit B'', gamma
mm10_v2_chr8_+_40307458_40307458	0.0918757	Hoxd11_Cdx1_Hoxc11	ENSMUST00000068999.7|Micu3|ENSMUSG00000039478.9|mitochondrial calcium uptake family, member 3
mm10_v2_chr13_-_3945349_3945349	0.0893003	Hoxd11_Cdx1_Hoxc11	ENSMUST00000058610.7|Ucn3|ENSMUSG00000044988.7|urocortin 3
mm10_v2_chr3_-_144932523_144932536	0.0856667	Hoxd11_Cdx1_Hoxc11	ENSMUST00000098549.3|AI747448|ENSMUSG00000074195.3|expressed sequence AI747448
mm10_v2_chr5_+_33018816_33018865	0.0816833	Hoxd11_Cdx1_Hoxc11	ENSMUST00000019109.7|Ywhah|ENSMUSG00000018965.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide
mm10_v2_chr10_-_60938123_60938142	0.0812215	Hoxd11_Cdx1_Hoxc11	ENSMUST00000036304.3|Pldi|ENSMUSG00000037247.3|polymorphic derived intron containing
mm10_v2_chr3_-_88410295_88410351	0.0794665	Hoxd11_Cdx1_Hoxc11	ENSMUST00000056370.7|Pmf1|ENSMUSG00000028066.10|polyamine-modulated factor 1
mm10_v2_chr18_-_42899294_42899317	0.0706384	Hoxd11_Cdx1_Hoxc11	ENSMUST00000117687.1|Ppp2r2b|ENSMUSG00000024500.12|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm10_v2_chr2_-_46442681_46442713	0.0694308	Hoxd11_Cdx1_Hoxc11	ENSMUST00000123911.1|Gm13470|ENSMUSG00000086644.1|predicted gene 13470
mm10_v2_chr15_-_81843699_81843755	0.0682584	Hoxd11_Cdx1_Hoxc11	ENSMUST00000092020.2|Gm8444|ENSMUSG00000069439.2|predicted gene 8444
mm10_v2_chrX_+_20364481_20364616	0.0682028	Hoxd11_Cdx1_Hoxc11	ENSMUST00000033372.6|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human) 	ENSMUST00000115391.1|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human) 	ENSMUST00000115387.1|Rp2h|ENSMUSG00000060090.10|retinitis pigmentosa 2 homolog (human)
mm10_v2_chr6_+_15196949_15197102	0.0646248	Hoxd11_Cdx1_Hoxc11	ENSMUST00000151301.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000131414.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000140557.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000115469.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr13_+_84404839_84404839	0.064325	Hoxd11_Cdx1_Hoxc11	ENSMUST00000170980.1|Gm17618|ENSMUSG00000091767.1|predicted gene, 17618
mm10_v2_chr8_-_70527645_70527783	0.0553812	Hoxd11_Cdx1_Hoxc11	ENSMUST00000132867.1|Kxd1|ENSMUSG00000055553.10|KxDL motif containing 1
mm10_v2_chr2_-_29787622_29787680	0.0549572	Hoxd11_Cdx1_Hoxc11	ENSMUST00000177467.1|Trub2|ENSMUSG00000039826.7|TruB pseudouridine (psi) synthase homolog 2 (E. coli) 	ENSMUST00000113807.3|Trub2|ENSMUSG00000039826.7|TruB pseudouridine (psi) synthase homolog 2 (E. coli)
mm10_v2_chr18_-_61036189_61036210	0.0498986	Hoxd11_Cdx1_Hoxc11	ENSMUST00000025521.8|Cdx1|ENSMUSG00000024619.8|caudal type homeobox 1
mm10_v2_chr6_-_8259098_8259173	0.0477067	Hoxd11_Cdx1_Hoxc11	ENSMUST00000012627.4|Rpa3|ENSMUSG00000012483.4|replication protein A3
mm10_v2_chr11_+_77216180_77216287	0.0437423	Hoxd11_Cdx1_Hoxc11	ENSMUST00000037912.5|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila) 	ENSMUST00000156488.1|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila)
mm10_v2_chr6_-_97617536_97617597	0.0431689	Hoxd11_Cdx1_Hoxc11	ENSMUST00000113355.2|Frmd4b|ENSMUSG00000030064.10|FERM domain containing 4B
mm10_v2_chr11_+_87566653_87566661	0.042877	Hoxd11_Cdx1_Hoxc11	ENSMUST00000060360.5|Gm11492|ENSMUSG00000090107.1|predicted gene 11492
mm10_v2_chr18_+_4994600_4994623	0.0420742	Hoxd11_Cdx1_Hoxc11	ENSMUST00000140448.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr15_+_101473472_101473478	0.0389935	Hoxd11_Cdx1_Hoxc11	ENSMUST00000088049.3|Krt86|ENSMUSG00000067614.4|keratin 86
mm10_v2_chr13_+_23581563_23581598	0.0372685	Hoxd11_Cdx1_Hoxc11	ENSMUST00000102968.1|Hist1h4d|ENSMUSG00000061482.6|histone cluster 1, H4d
mm10_v2_chr15_-_41869703_41869727	0.0345883	Hoxd11_Cdx1_Hoxc11	ENSMUST00000054742.5|Abra|ENSMUSG00000042895.5|actin-binding Rho activating protein
mm10_v2_chr13_+_46273700_46273721	0.0344892	Hoxd11_Cdx1_Hoxc11	ENSMUST00000076622.3|Stmnd1|ENSMUSG00000063529.3|stathmin domain containing 1
mm10_v2_chr2_+_29346803_29346842	0.0210368	Hoxd11_Cdx1_Hoxc11	ENSMUST00000028139.4|Med27|ENSMUSG00000026799.9|mediator complex subunit 27 	ENSMUST00000113830.4|Med27|ENSMUSG00000026799.9|mediator complex subunit 27
mm10_v2_chr2_+_65930117_65930190	0.0197193	Hoxd11_Cdx1_Hoxc11	ENSMUST00000176109.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr3_+_103074035_103074053	0.0169884	Hoxd11_Cdx1_Hoxc11	ENSMUST00000176440.1|Ampd1|ENSMUSG00000070385.6|adenosine monophosphate deaminase 1
mm10_v2_chr4_-_103026709_103026842	0.0139613	Hoxd11_Cdx1_Hoxc11	ENSMUST00000084382.5|Insl5|ENSMUSG00000066090.5|insulin-like 5 	ENSMUST00000106869.2|Insl5|ENSMUSG00000066090.5|insulin-like 5
mm10_v2_chr5_-_142906702_142906754	0.0129633	Hoxd11_Cdx1_Hoxc11	ENSMUST00000167721.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000163829.1|Actb|ENSMUSG00000029580.8|actin, beta 	ENSMUST00000100497.4|Actb|ENSMUSG00000029580.8|actin, beta
mm10_v2_chr17_+_35016576_35016638	0.0126057	Hoxd11_Cdx1_Hoxc11	ENSMUST00000007245.1|Vwa7|ENSMUSG00000007030.2|von Willebrand factor A domain containing 7 	ENSMUST00000172499.1|Vwa7|ENSMUSG00000007030.2|von Willebrand factor A domain containing 7
mm10_v2_chr6_-_145434079_145434090	0.0125965	Hoxd11_Cdx1_Hoxc11	ENSMUST00000149666.1|Ifltd1|ENSMUSG00000054966.7|intermediate filament tail domain containing 1
mm10_v2_chr3_-_141931523_141931565	0.0123917	Hoxd11_Cdx1_Hoxc11	ENSMUST00000106232.1|Bmpr1b|ENSMUSG00000052430.9|bone morphogenetic protein receptor, type 1B
mm10_v2_chr11_-_67116831_67116845	0.00975816	Hoxd11_Cdx1_Hoxc11	ENSMUST00000153497.1|2310065F04Rik|ENSMUSG00000087410.1|RIKEN cDNA 2310065F04 gene
mm10_v2_chr17_-_36190121_36190287	0.00147209	Hoxd11_Cdx1_Hoxc11	ENSMUST00000097329.3|H2-T3|ENSMUSG00000054128.10|histocompatibility 2, T region locus 3 	ENSMUST00000025312.6|H2-T3|ENSMUSG00000054128.10|histocompatibility 2, T region locus 3 	ENSMUST00000102675.3|H2-T3|ENSMUSG00000054128.10|histocompatibility 2, T region locus 3
mm10_v2_chr15_-_101438788_101438804	0.000135961	Hoxd11_Cdx1_Hoxc11	ENSMUST00000081945.3|Krt83|ENSMUSG00000047641.7|keratin 83
