mm10_v2_chr5_+_119625939_119625966	2.24493	Hoxc13_Hoxd13	ENSMUST00000156235.1|Gm16063|ENSMUSG00000085708.1|predicted gene 16063
mm10_v2_chr5_-_66080971_66081009	1.58798	Hoxc13_Hoxd13	ENSMUST00000127275.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47 	ENSMUST00000113724.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47
mm10_v2_chr17_-_31144271_31144288	1.48045	Hoxc13_Hoxd13	ENSMUST00000024826.7|Tff2|ENSMUSG00000024028.7|trefoil factor 2 (spasmolytic protein 1)
mm10_v2_chr18_-_38209762_38209786	1.47702	Hoxc13_Hoxd13	ENSMUST00000057185.6|Pcdh1|ENSMUSG00000051375.9|protocadherin 1
mm10_v2_chr4_-_141825997_141826160	1.45824	Hoxc13_Hoxd13	ENSMUST00000102481.3|Cela2a|ENSMUSG00000058579.5|chymotrypsin-like elastase family, member 2A
mm10_v2_chr5_+_114146525_114146550	1.10248	Hoxc13_Hoxd13	ENSMUST00000102582.1|Acacb|ENSMUSG00000042010.10|acetyl-Coenzyme A carboxylase beta
mm10_v2_chr7_-_73537621_73537766	1.01443	Hoxc13_Hoxd13	ENSMUST00000172704.1|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr10_+_87859481_87859492	0.944858	Hoxc13_Hoxd13	ENSMUST00000121952.1|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr10_+_87859593_87859612	0.921505	Hoxc13_Hoxd13	ENSMUST00000126490.1|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr7_+_67647405_67647456	0.887216	Hoxc13_Hoxd13	ENSMUST00000032774.8|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23 	ENSMUST00000107471.1|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23
mm10_v2_chr14_-_118052235_118052253	0.871462	Hoxc13_Hoxd13	ENSMUST00000022725.2|Dct|ENSMUSG00000022129.3|dopachrome tautomerase
mm10_v2_chr9_-_51328898_51328923	0.806584	Hoxc13_Hoxd13	ENSMUST00000039959.4|1810046K07Rik|ENSMUSG00000036027.5|RIKEN cDNA 1810046K07 gene
mm10_v2_chr10_-_34044302_34044317	0.770064	Hoxc13_Hoxd13	ENSMUST00000048052.5|Fam26d|ENSMUSG00000039508.5|family with sequence similarity 26, member D
mm10_v2_chr3_+_81996922_81996922	0.761045	Hoxc13_Hoxd13	ENSMUST00000029641.3|Asic5|ENSMUSG00000028008.4|acid-sensing (proton-gated) ion channel family member 5
mm10_v2_chr10_+_87860030_87860086	0.752155	Hoxc13_Hoxd13	ENSMUST00000062862.6|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr6_+_108213086_108213123	0.743658	Hoxc13_Hoxd13	ENSMUST00000032192.6|Itpr1|ENSMUSG00000030102.8|inositol 1,4,5-trisphosphate receptor 1
mm10_v2_chr8_-_70139197_70139261	0.71573	Hoxc13_Hoxd13	ENSMUST00000075724.7|Rfxank|ENSMUSG00000036120.9|regulatory factor X-associated ankyrin-containing protein
mm10_v2_chr8_+_56551090_56551143	0.656672	Hoxc13_Hoxd13	ENSMUST00000040218.5|Fbxo8|ENSMUSG00000038206.6|F-box protein 8 	ENSMUST00000110322.3|Fbxo8|ENSMUSG00000038206.6|F-box protein 8
mm10_v2_chr17_-_13761441_13761601	0.631372	Hoxc13_Hoxd13	ENSMUST00000127032.1|Tcte2|ENSMUSG00000038347.8|t-complex-associated testis expressed 2
mm10_v2_chr6_+_124304646_124304671	0.630577	Hoxc13_Hoxd13	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr1_+_60908993_60909033	0.602871	Hoxc13_Hoxd13	ENSMUST00000027164.2|Ctla4|ENSMUSG00000026011.7|cytotoxic T-lymphocyte-associated protein 4
mm10_v2_chr14_+_65666394_65666416	0.563185	Hoxc13_Hoxd13	ENSMUST00000022610.8|Scara5|ENSMUSG00000022032.8|scavenger receptor class A, member 5 (putative)
mm10_v2_chr11_+_119022962_119023104	0.559937	Hoxc13_Hoxd13	ENSMUST00000026662.7|Cbx2|ENSMUSG00000025577.7|chromobox 2
mm10_v2_chr12_-_48559971_48559971	0.540662	Hoxc13_Hoxd13	ENSMUST00000169406.1|Gm1818|ENSMUSG00000091277.1|predicted gene 1818
mm10_v2_chr1_+_194976342_194976391	0.514732	Hoxc13_Hoxd13	ENSMUST00000181226.1|A330023F24Rik|ENSMUSG00000096929.1|RIKEN cDNA A330023F24 gene 	ENSMUST00000181947.1|A330023F24Rik|ENSMUSG00000096929.1|RIKEN cDNA A330023F24 gene
mm10_v2_chr2_-_127792467_127792505	0.479993	Hoxc13_Hoxd13	ENSMUST00000135091.1|1500011K16Rik|ENSMUSG00000051319.6|RIKEN cDNA 1500011K16 gene
mm10_v2_chr10_+_28668560_28668637	0.474179	Hoxc13_Hoxd13	ENSMUST00000161345.1|Themis|ENSMUSG00000049109.8|thymocyte selection associated
mm10_v2_chr11_-_100105626_100105645	0.471342	Hoxc13_Hoxd13	ENSMUST00000107416.2|Krt36|ENSMUSG00000020916.8|keratin 36
mm10_v2_chr16_+_23226014_23226077	0.459435	Hoxc13_Hoxd13	ENSMUST00000178797.1|St6gal1|ENSMUSG00000022885.9|beta galactoside alpha 2,6 sialyltransferase 1
mm10_v2_chr5_+_90561102_90561209	0.453571	Hoxc13_Hoxd13	ENSMUST00000094615.4|5830473C10Rik|ENSMUSG00000070690.4|RIKEN cDNA 5830473C10 gene
mm10_v2_chr7_+_28540863_28540886	0.449166	Hoxc13_Hoxd13	ENSMUST00000119180.2|Sycn|ENSMUSG00000084174.2|syncollin
mm10_v2_chrX_-_136868537_136868755	0.445395	Hoxc13_Hoxd13	ENSMUST00000058814.6|Rab9b|ENSMUSG00000043463.6|RAB9B, member RAS oncogene family
mm10_v2_chr11_-_100029868_100029887	0.439067	Hoxc13_Hoxd13	ENSMUST00000073890.3|Krt33b|ENSMUSG00000057723.3|keratin 33B
mm10_v2_chr15_+_23036449_23036492	0.432621	Hoxc13_Hoxd13	ENSMUST00000164787.1|Cdh18|ENSMUSG00000040420.8|cadherin 18
mm10_v2_chr11_-_100016204_100016216	0.420437	Hoxc13_Hoxd13	ENSMUST00000018399.2|Krt33a|ENSMUSG00000035592.2|keratin 33A
mm10_v2_chr3_-_142169311_142169425	0.418083	Hoxc13_Hoxd13	ENSMUST00000106230.1|Bmpr1b|ENSMUSG00000052430.9|bone morphogenetic protein receptor, type 1B
mm10_v2_chr7_-_34655500_34655515	0.402691	Hoxc13_Hoxd13	ENSMUST00000032709.1|Kctd15|ENSMUSG00000030499.3|potassium channel tetramerisation domain containing 15
mm10_v2_chr11_-_5542177_5542219	0.376031	Hoxc13_Hoxd13	ENSMUST00000020776.4|Ccdc117|ENSMUSG00000020482.4|coiled-coil domain containing 117
mm10_v2_chr14_+_65666430_65666443	0.368845	Hoxc13_Hoxd13	ENSMUST00000069226.6|Scara5|ENSMUSG00000022032.8|scavenger receptor class A, member 5 (putative)
mm10_v2_chr11_-_100096225_100096242	0.363759	Hoxc13_Hoxd13	ENSMUST00000103127.3|Krt35|ENSMUSG00000048013.9|keratin 35
mm10_v2_chr13_-_17694729_17694786	0.357598	Hoxc13_Hoxd13	ENSMUST00000068545.4|5033411D12Rik|ENSMUSG00000055137.6|RIKEN cDNA 5033411D12 gene
mm10_v2_chr1_+_182124737_182124800	0.350622	Hoxc13_Hoxd13	ENSMUST00000111018.1|Srp9|ENSMUSG00000026511.6|signal recognition particle 9 	ENSMUST00000027792.5|Srp9|ENSMUSG00000026511.6|signal recognition particle 9
mm10_v2_chr6_+_48448100_48448229	0.350429	Hoxc13_Hoxd13	ENSMUST00000169350.2|Sspo|ENSMUSG00000029797.6|SCO-spondin 	ENSMUST00000043676.5|Sspo|ENSMUSG00000029797.6|SCO-spondin
mm10_v2_chr4_+_54945038_54945082	0.346799	Hoxc13_Hoxd13	ENSMUST00000133895.1|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chr7_-_119895446_119895543	0.334874	Hoxc13_Hoxd13	ENSMUST00000098080.2|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr10_-_28986280_28986313	0.326505	Hoxc13_Hoxd13	ENSMUST00000152363.1|2310057J18Rik|ENSMUSG00000015519.6|RIKEN cDNA 2310057J18 gene 	ENSMUST00000015663.6|2310057J18Rik|ENSMUSG00000015519.6|RIKEN cDNA 2310057J18 gene
mm10_v2_chr5_-_121836810_121836845	0.325554	Hoxc13_Hoxd13	ENSMUST00000118580.1|Sh2b3|ENSMUSG00000042594.10|SH2B adaptor protein 3 	ENSMUST00000040308.7|Sh2b3|ENSMUSG00000042594.10|SH2B adaptor protein 3
mm10_v2_chr17_-_90088343_90088373	0.32509	Hoxc13_Hoxd13	ENSMUST00000173917.1|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr11_+_75732869_75732975	0.314462	Hoxc13_Hoxd13	ENSMUST00000067664.3|Ywhae|ENSMUSG00000020849.7|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm10_v2_chr2_-_17460610_17460635	0.313261	Hoxc13_Hoxd13	ENSMUST00000145492.1|Nebl|ENSMUSG00000053702.10|nebulette
mm10_v2_chr2_+_74697663_74697680	0.296241	Hoxc13_Hoxd13	ENSMUST00000059272.8|Hoxd9|ENSMUSG00000043342.8|homeobox D9
mm10_v2_chr11_+_105994635_105994678	0.293667	Hoxc13_Hoxd13	ENSMUST00000183675.1|ACE3|ENSMUSG00000098427.1|angiotensin I converting enzyme 3 precursor  	ENSMUST00000184871.1|Ace3|ENSMUSG00000098551.1|angiotensin I converting enzyme (peptidyl-dipeptidase A) 3
mm10_v2_chr1_+_59256906_59256907	0.293388	Hoxc13_Hoxd13	ENSMUST00000160662.1|Cdk15|ENSMUSG00000026023.10|cyclin-dependent kinase 15 	ENSMUST00000114248.2|Cdk15|ENSMUSG00000026023.10|cyclin-dependent kinase 15
mm10_v2_chr11_+_96194299_96194316	0.288226	Hoxc13_Hoxd13	ENSMUST00000062709.3|Hoxb13|ENSMUSG00000049604.3|homeobox B13
mm10_v2_chr7_+_35119285_35119301	0.28791	Hoxc13_Hoxd13	ENSMUST00000042985.9|Cebpa|ENSMUSG00000034957.9|CCAAT/enhancer binding protein (C/EBP), alpha
mm10_v2_chr11_-_99521258_99521295	0.283084	Hoxc13_Hoxd13	ENSMUST00000076948.1|Krt39|ENSMUSG00000064165.2|keratin 39
mm10_v2_chr3_-_142169196_142169261	0.279114	Hoxc13_Hoxd13	ENSMUST00000098568.1|Bmpr1b|ENSMUSG00000052430.9|bone morphogenetic protein receptor, type 1B
mm10_v2_chr15_-_101573883_101573913	0.269574	Hoxc13_Hoxd13	ENSMUST00000042957.5|Krt75|ENSMUSG00000022986.5|keratin 75
mm10_v2_chr11_-_99521336_99521340	0.257844	Hoxc13_Hoxd13	ENSMUST00000107445.1|Krt39|ENSMUSG00000064165.2|keratin 39
mm10_v2_chr1_+_107361929_107361929	0.256089	Hoxc13_Hoxd13	ENSMUST00000027566.2|Serpinb11|ENSMUSG00000026327.2|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11
mm10_v2_chr7_-_68264201_68264233	0.255731	Hoxc13_Hoxd13	ENSMUST00000032770.2|Pgpep1l|ENSMUSG00000030553.2|pyroglutamyl-peptidase I-like
mm10_v2_chr10_-_128696257_128696273	0.254834	Hoxc13_Hoxd13	ENSMUST00000000727.2|Rab5b|ENSMUSG00000000711.2|RAB5B, member RAS oncogene family
mm10_v2_chr7_-_102759465_102759478	0.251618	Hoxc13_Hoxd13	ENSMUST00000168007.1|Olfr78|ENSMUSG00000043366.7|olfactory receptor 78 	ENSMUST00000060187.7|Olfr78|ENSMUSG00000043366.7|olfactory receptor 78
mm10_v2_chr3_-_88458876_88459043	0.246154	Hoxc13_Hoxd13	ENSMUST00000147200.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENSMUST00000169222.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr16_-_89508313_89508327	0.242014	Hoxc13_Hoxd13	ENSMUST00000056118.2|Krtap7-1|ENSMUSG00000056706.2|keratin associated protein 7-1
mm10_v2_chr8_+_105264648_105264697	0.239183	Hoxc13_Hoxd13	ENSMUST00000036221.5|Fbxl8|ENSMUSG00000033313.5|F-box and leucine-rich repeat protein 8
mm10_v2_chr8_+_104961713_104961786	0.233565	Hoxc13_Hoxd13	ENSMUST00000043183.7|Ces2g|ENSMUSG00000031877.8|carboxylesterase 2G
mm10_v2_chr9_-_96719549_96719565	0.233386	Hoxc13_Hoxd13	ENSMUST00000128269.1|Zbtb38|ENSMUSG00000040433.10|zinc finger and BTB domain containing 38
mm10_v2_chr11_-_53430417_53430434	0.231056	Hoxc13_Hoxd13	ENSMUST00000109019.1|Uqcrq|ENSMUSG00000044894.8|ubiquinol-cytochrome c reductase, complex III subunit VII
mm10_v2_chr8_+_112570043_112570060	0.218657	Hoxc13_Hoxd13	ENSMUST00000034225.6|Cntnap4|ENSMUSG00000031772.11|contactin associated protein-like 4 	ENSMUST00000118171.1|Cntnap4|ENSMUSG00000031772.11|contactin associated protein-like 4
mm10_v2_chrX_+_107816477_107816572	0.212952	Hoxc13_Hoxd13	ENSMUST00000143975.1|Fam46d|ENSMUSG00000073007.4|family with sequence similarity 46, member D 	ENSMUST00000144695.1|Fam46d|ENSMUSG00000073007.4|family with sequence similarity 46, member D 	ENSMUST00000167154.1|Fam46d|ENSMUSG00000073007.4|family with sequence similarity 46, member D
mm10_v2_chr9_-_77347889_77347916	0.205261	Hoxc13_Hoxd13	ENSMUST00000185039.1|Mlip|ENSMUSG00000032355.10|muscular LMNA-interacting protein
mm10_v2_chr1_-_138847579_138847719	0.198995	Hoxc13_Hoxd13	ENSMUST00000093486.3|Lhx9|ENSMUSG00000019230.8|LIM homeobox protein 9 	ENSMUST00000046870.6|Lhx9|ENSMUSG00000019230.8|LIM homeobox protein 9
mm10_v2_chr8_-_36732897_36733054	0.197361	Hoxc13_Hoxd13	ENSMUST00000098826.3|Dlc1|ENSMUSG00000031523.10|deleted in liver cancer 1
mm10_v2_chr5_+_17574268_17574293	0.192121	Hoxc13_Hoxd13	ENSMUST00000030568.7|Sema3c|ENSMUSG00000028780.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
mm10_v2_chr16_-_57231434_57231509	0.190133	Hoxc13_Hoxd13	ENSMUST00000023431.6|Tbc1d23|ENSMUSG00000022749.6|TBC1 domain family, member 23
mm10_v2_chr11_-_102407899_102407946	0.187468	Hoxc13_Hoxd13	ENSMUST00000124755.1|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39
mm10_v2_chr3_-_88459047_88459101	0.186343	Hoxc13_Hoxd13	ENSMUST00000165898.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENSMUST00000127436.1|Sema4a|ENSMUSG00000028064.11|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm10_v2_chr5_+_105876532_105876585	0.183441	Hoxc13_Hoxd13	ENSMUST00000150440.1|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326 	ENSMUST00000031227.4|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326
mm10_v2_chr15_-_101438788_101438804	0.181667	Hoxc13_Hoxd13	ENSMUST00000081945.3|Krt83|ENSMUSG00000047641.7|keratin 83
mm10_v2_chr17_+_8283762_8283852	0.171266	Hoxc13_Hoxd13	ENSMUST00000155364.1|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1 	ENSMUST00000046754.8|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1 	ENSMUST00000124023.1|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1
mm10_v2_chr8_-_15046047_15046091	0.169839	Hoxc13_Hoxd13	ENSMUST00000050493.3|BB014433|ENSMUSG00000049008.4|expressed sequence BB014433 	ENSMUST00000123331.1|BB014433|ENSMUSG00000049008.4|expressed sequence BB014433
mm10_v2_chr1_-_39805311_39805345	0.160041	Hoxc13_Hoxd13	ENSMUST00000171319.2|Gm3646|ENSMUSG00000091937.2|predicted gene 3646
mm10_v2_chr9_+_50575273_50575273	0.158483	Hoxc13_Hoxd13	ENSMUST00000059081.6|Il18|ENSMUSG00000039217.6|interleukin 18 	ENSMUST00000180021.1|Il18|ENSMUSG00000039217.6|interleukin 18
mm10_v2_chr5_-_62765618_62765656	0.158431	Hoxc13_Hoxd13	ENSMUST00000159470.1|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr12_+_11456052_11456079	0.158179	Hoxc13_Hoxd13	ENSMUST00000124065.1|Rad51ap2|ENSMUSG00000086022.1|RAD51 associated protein 2
mm10_v2_chr9_-_96719404_96719479	0.15716	Hoxc13_Hoxd13	ENSMUST00000140121.1|Zbtb38|ENSMUSG00000040433.10|zinc finger and BTB domain containing 38
mm10_v2_chr16_-_59555752_59555752	0.155756	Hoxc13_Hoxd13	ENSMUST00000179383.1|Crybg3|ENSMUSG00000022723.9|beta-gamma crystallin domain containing 3 	ENSMUST00000044604.8|Crybg3|ENSMUSG00000022723.9|beta-gamma crystallin domain containing 3
mm10_v2_chr10_-_127351753_127351772	0.154722	Hoxc13_Hoxd13	ENSMUST00000059718.4|Inhbe|ENSMUSG00000047492.4|inhibin beta E
mm10_v2_chr11_-_100088226_100088270	0.154422	Hoxc13_Hoxd13	ENSMUST00000107419.1|Krt32|ENSMUSG00000046095.5|keratin 32
mm10_v2_chr15_-_101532819_101532824	0.153094	Hoxc13_Hoxd13	ENSMUST00000023720.7|Krt84|ENSMUSG00000044294.7|keratin 84
mm10_v2_chr6_-_24528013_24528034	0.152783	Hoxc13_Hoxd13	ENSMUST00000023851.5|Ndufa5|ENSMUSG00000023089.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
mm10_v2_chr11_-_23895208_23895280	0.148121	Hoxc13_Hoxd13	ENSMUST00000102863.2|Papolg|ENSMUSG00000020273.7|poly(A) polymerase gamma 	ENSMUST00000020513.3|Papolg|ENSMUSG00000020273.7|poly(A) polymerase gamma
mm10_v2_chr5_+_135064206_135064254	0.145263	Hoxc13_Hoxd13	ENSMUST00000071263.5|Dnajc30|ENSMUSG00000061118.7|DnaJ (Hsp40) homolog, subfamily C, member 30
mm10_v2_chr2_-_180824596_180824630	0.143467	Hoxc13_Hoxd13	ENSMUST00000148700.1|Gm14340|ENSMUSG00000074507.6|predicted gene 14340
mm10_v2_chr17_+_8182247_8182247	0.142034	Hoxc13_Hoxd13	ENSMUST00000161898.1|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner
mm10_v2_chr14_+_124005355_124005355	0.140755	Hoxc13_Hoxd13	ENSMUST00000166105.1|Gm17615|ENSMUSG00000090286.1|predicted gene, 17615
mm10_v2_chr11_-_99337930_99337967	0.139666	Hoxc13_Hoxd13	ENSMUST00000100482.2|Krt26|ENSMUSG00000075570.2|keratin 26
mm10_v2_chr5_-_62766153_62766246	0.139254	Hoxc13_Hoxd13	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr11_-_102407315_102407448	0.136007	Hoxc13_Hoxd13	ENSMUST00000149777.1|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39 	ENSMUST00000154001.1|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39
mm10_v2_chr19_-_41896132_41896155	0.135497	Hoxc13_Hoxd13	ENSMUST00000038677.3|Rrp12|ENSMUSG00000035049.3|ribosomal RNA processing 12 homolog (S. cerevisiae)
mm10_v2_chr10_-_120979327_120979373	0.135155	Hoxc13_Hoxd13	ENSMUST00000119944.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3 	ENSMUST00000119093.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3
mm10_v2_chr7_-_30612731_30612744	0.133028	Hoxc13_Hoxd13	ENSMUST00000006476.4|Upk1a|ENSMUSG00000006313.4|uroplakin 1A
mm10_v2_chr4_-_133602168_133602168	0.130393	Hoxc13_Hoxd13	ENSMUST00000057311.3|Sfn|ENSMUSG00000047281.3|stratifin
mm10_v2_chr3_-_75451818_75451818	0.123032	Hoxc13_Hoxd13	ENSMUST00000178270.1|Wdr49|ENSMUSG00000095162.1|WD repeat domain 49
mm10_v2_chr1_+_60909148_60909171	0.118092	Hoxc13_Hoxd13	ENSMUST00000097720.3|Ctla4|ENSMUSG00000026011.7|cytotoxic T-lymphocyte-associated protein 4
mm10_v2_chr10_+_96616998_96617015	0.1156	Hoxc13_Hoxd13	ENSMUST00000038377.7|Btg1|ENSMUSG00000036478.7|B cell translocation gene 1, anti-proliferative
mm10_v2_chr11_-_100050542_100050557	0.113621	Hoxc13_Hoxd13	ENSMUST00000007318.1|Krt31|ENSMUSG00000048981.1|keratin 31
mm10_v2_chr8_+_33653238_33653238	0.11319	Hoxc13_Hoxd13	ENSMUST00000033992.8|Gsr|ENSMUSG00000031584.10|glutathione reductase
mm10_v2_chr1_+_53313636_53313682	0.107761	Hoxc13_Hoxd13	ENSMUST00000114484.1|Osgepl1|ENSMUSG00000026096.8|O-sialoglycoprotein endopeptidase-like 1
mm10_v2_chr4_-_134853294_134853345	0.104698	Hoxc13_Hoxd13	ENSMUST00000030628.8|Tmem57|ENSMUSG00000028826.8|transmembrane protein 57
mm10_v2_chr4_+_109235262_109235262	0.103882	Hoxc13_Hoxd13	ENSMUST00000106631.2|Calr4|ENSMUSG00000028558.8|calreticulin 4
mm10_v2_chr5_-_114858682_114858682	0.103306	Hoxc13_Hoxd13	ENSMUST00000066959.4|Gm9936|ENSMUSG00000054123.4|predicted gene 9936
mm10_v2_chr1_-_74124420_74124466	0.101386	Hoxc13_Hoxd13	ENSMUST00000169786.1|Tns1|ENSMUSG00000055322.8|tensin 1
mm10_v2_chr6_+_78370877_78370892	0.0997596	Hoxc13_Hoxd13	ENSMUST00000096904.3|Reg3b|ENSMUSG00000071356.5|regenerating islet-derived 3 beta
mm10_v2_chr9_-_50659780_50659801	0.098784	Hoxc13_Hoxd13	ENSMUST00000034567.3|Dlat|ENSMUSG00000000168.3|dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
mm10_v2_chr11_-_102407455_102407544	0.0981574	Hoxc13_Hoxd13	ENSMUST00000107098.1|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39 	ENSMUST00000018821.2|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39
mm10_v2_chr11_+_96286623_96286653	0.0934637	Hoxc13_Hoxd13	ENSMUST00000049352.7|Hoxb7|ENSMUSG00000038721.8|homeobox B7
mm10_v2_chr1_-_30719961_30719961	0.0911783	Hoxc13_Hoxd13	ENSMUST00000065469.1|Gm9898|ENSMUSG00000053185.1|predicted gene 9898
mm10_v2_chr5_+_92809372_92809436	0.085658	Hoxc13_Hoxd13	ENSMUST00000113054.2|Shroom3|ENSMUSG00000029381.9|shroom family member 3
mm10_v2_chr13_-_21402688_21402755	0.0847964	Hoxc13_Hoxd13	ENSMUST00000117721.1|Zkscan3|ENSMUSG00000021327.12|zinc finger with KRAB and SCAN domains 3 	ENSMUST00000070785.8|Zkscan3|ENSMUSG00000021327.12|zinc finger with KRAB and SCAN domains 3 	ENSMUST00000116433.1|Zkscan3|ENSMUSG00000021327.12|zinc finger with KRAB and SCAN domains 3 	ENSMUST00000116434.3|Zkscan3|ENSMUSG00000021327.12|zinc finger with KRAB and SCAN domains 3
mm10_v2_chr14_-_55713482_55713503	0.0835432	Hoxc13_Hoxd13	ENSMUST00000168729.1|Tgm1|ENSMUSG00000022218.9|transglutaminase 1, K polypeptide 	ENSMUST00000178034.1|Tgm1|ENSMUSG00000022218.9|transglutaminase 1, K polypeptide
mm10_v2_chr9_-_110946158_110946158	0.0810483	Hoxc13_Hoxd13	ENSMUST00000035075.8|Tdgf1|ENSMUSG00000032494.8|teratocarcinoma-derived growth factor 1
mm10_v2_chr3_-_104366613_104366613	0.079223	Hoxc13_Hoxd13	ENSMUST00000056145.2|Gm5546|ENSMUSG00000022187.2|predicted gene 5546
mm10_v2_chr18_+_36744656_36744737	0.0785537	Hoxc13_Hoxd13	ENSMUST00000007042.5|Ik|ENSMUSG00000024474.5|IK cytokine
mm10_v2_chr8_+_34807287_34807310	0.0784867	Hoxc13_Hoxd13	ENSMUST00000033930.4|Dusp4|ENSMUSG00000031530.6|dual specificity phosphatase 4
mm10_v2_chr14_-_76110760_76110818	0.0733937	Hoxc13_Hoxd13	ENSMUST00000022585.3|Gpalpp1|ENSMUSG00000022008.3|GPALPP motifs containing 1
mm10_v2_chr9_-_64022027_64022042	0.0710522	Hoxc13_Hoxd13	ENSMUST00000179458.1|Smad6|ENSMUSG00000036867.7|SMAD family member 6
mm10_v2_chr5_-_135064063_135064116	0.0699261	Hoxc13_Hoxd13	ENSMUST00000111205.1|Wbscr22|ENSMUSG00000005378.11|Williams Beuren syndrome chromosome region 22 	ENSMUST00000141309.1|Wbscr22|ENSMUSG00000005378.11|Williams Beuren syndrome chromosome region 22
mm10_v2_chr9_+_98955525_98955607	0.0667447	Hoxc13_Hoxd13	ENSMUST00000051312.2|Foxl2|ENSMUSG00000050397.2|forkhead box L2
mm10_v2_chr6_+_24528144_24528200	0.0621088	Hoxc13_Hoxd13	ENSMUST00000031696.3|Asb15|ENSMUSG00000029685.9|ankyrin repeat and SOCS box-containing 15
mm10_v2_chr6_+_96115249_96115311	0.0569613	Hoxc13_Hoxd13	ENSMUST00000075080.5|Fam19a1|ENSMUSG00000059187.6|family with sequence similarity 19, member A1
mm10_v2_chr3_+_79885930_79886002	0.0553744	Hoxc13_Hoxd13	ENSMUST00000029567.8|Fam198b|ENSMUSG00000027955.10|family with sequence similarity 198, member B
mm10_v2_chr11_+_77216180_77216287	0.0545728	Hoxc13_Hoxd13	ENSMUST00000037912.5|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila) 	ENSMUST00000156488.1|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila)
mm10_v2_chr4_+_21879662_21879702	0.0521717	Hoxc13_Hoxd13	ENSMUST00000029909.2|Coq3|ENSMUSG00000028247.2|coenzyme Q3 homolog, methyltransferase (yeast)
mm10_v2_chr6_-_112947246_112947277	0.046134	Hoxc13_Hoxd13	ENSMUST00000088373.4|Srgap3|ENSMUSG00000030257.10|SLIT-ROBO Rho GTPase activating protein 3
mm10_v2_chr3_+_76074270_76074270	0.0451801	Hoxc13_Hoxd13	ENSMUST00000038364.8|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr15_-_79774408_79774474	0.0424779	Hoxc13_Hoxd13	ENSMUST00000023055.6|Dnal4|ENSMUSG00000022420.9|dynein, axonemal, light chain 4
mm10_v2_chr14_-_55713088_55713110	0.0374098	Hoxc13_Hoxd13	ENSMUST00000002389.7|Tgm1|ENSMUSG00000022218.9|transglutaminase 1, K polypeptide
mm10_v2_chr11_-_100041547_100041561	0.0372917	Hoxc13_Hoxd13	ENSMUST00000056362.2|Krt34|ENSMUSG00000043485.2|keratin 34
mm10_v2_chr15_-_101924725_101924742	0.0372649	Hoxc13_Hoxd13	ENSMUST00000023797.6|Krt4|ENSMUSG00000059668.5|keratin 4
mm10_v2_chr18_+_37484955_37485028	0.0352691	Hoxc13_Hoxd13	ENSMUST00000053856.4|Pcdhb17|ENSMUSG00000046387.4|protocadherin beta 17
mm10_v2_chr18_-_46280820_46280850	0.0279911	Hoxc13_Hoxd13	ENSMUST00000025354.3|Pggt1b|ENSMUSG00000024477.3|protein geranylgeranyltransferase type I, beta subunit
mm10_v2_chr15_-_79774383_79774394	0.0234227	Hoxc13_Hoxd13	ENSMUST00000069877.5|Dnal4|ENSMUSG00000022420.9|dynein, axonemal, light chain 4
mm10_v2_chr10_-_53647080_53647080	0.0230079	Hoxc13_Hoxd13	ENSMUST00000169866.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr5_-_86745787_86745815	0.0142096	Hoxc13_Hoxd13	ENSMUST00000161306.1|Tmprss11e|ENSMUSG00000054537.8|transmembrane protease, serine 11e
mm10_v2_chr9_+_5308828_5308873	0.00263883	Hoxc13_Hoxd13	ENSMUST00000162846.1|Casp4|ENSMUSG00000033538.7|caspase 4, apoptosis-related cysteine peptidase 	ENSMUST00000027012.7|Casp4|ENSMUSG00000033538.7|caspase 4, apoptosis-related cysteine peptidase
mm10_v2_chr11_-_99993992_99993997	0.000543094	Hoxc13_Hoxd13	ENSMUST00000105049.1|Krtap17-1|ENSMUSG00000078252.1|keratin associated protein 17-1
