mm10_v2_chr6_-_138079916_138079916	7.8839	Hoxa6	ENSMUST00000171804.1|Slc15a5|ENSMUSG00000044378.6|solute carrier family 15, member 5
mm10_v2_chr2_+_70474923_70474923	7.15911	Hoxa6	ENSMUST00000100043.2|Sp5|ENSMUSG00000075304.2|trans-acting transcription factor 5
mm10_v2_chr16_+_42907563_42907684	6.8908	Hoxa6	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr14_-_118052235_118052253	6.44844	Hoxa6	ENSMUST00000022725.2|Dct|ENSMUSG00000022129.3|dopachrome tautomerase
mm10_v2_chr1_-_150466165_150466236	5.96412	Hoxa6	ENSMUST00000162367.1|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000161611.1|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000161320.1|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) 	ENSMUST00000159035.1|Prg4|ENSMUSG00000006014.10|proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
mm10_v2_chr8_-_5105232_5105254	5.8454	Hoxa6	ENSMUST00000023835.1|Slc10a2|ENSMUSG00000023073.1|solute carrier family 10, member 2
mm10_v2_chr2_-_148038270_148038299	4.86473	Hoxa6	ENSMUST00000132070.1|9030622O22Rik|ENSMUSG00000086141.1|RIKEN cDNA 9030622O22 gene
mm10_v2_chr2_-_18048784_18048822	4.20977	Hoxa6	ENSMUST00000142856.1|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr10_+_87859255_87859266	4.07101	Hoxa6	ENSMUST00000105300.2|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr19_+_26749726_26749877	4.0697	Hoxa6	ENSMUST00000175842.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chrM_+_5319_5333	3.93675	Hoxa6	ENSMUST00000082402.1|mt-Co1|ENSMUSG00000064351.1|mitochondrially encoded cytochrome c oxidase I
mm10_v2_chr16_+_43503607_43503642	3.90993	Hoxa6	ENSMUST00000126100.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000123047.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000156981.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr5_+_42067960_42067960	3.79937	Hoxa6	ENSMUST00000087332.4|Gm16223|ENSMUSG00000067285.4|predicted gene 16223
mm10_v2_chr6_+_15185203_15185244	3.75217	Hoxa6	ENSMUST00000154448.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr16_+_43247278_43247309	3.6704	Hoxa6	ENSMUST00000114691.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000079441.6|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr10_+_87859062_87859094	3.47796	Hoxa6	ENSMUST00000095360.4|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr14_+_29018205_29018226	3.33202	Hoxa6	ENSMUST00000055662.2|Lrtm1|ENSMUSG00000045776.2|leucine-rich repeats and transmembrane domains 1
mm10_v2_chr19_+_26605106_26605119	3.27972	Hoxa6	ENSMUST00000025862.7|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENSMUST00000176030.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr16_+_43235856_43235880	2.97543	Hoxa6	ENSMUST00000146708.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr4_+_99295900_99295900	2.90779	Hoxa6	ENSMUST00000094955.1|Gm12689|ENSMUSG00000070891.1|predicted gene 12689
mm10_v2_chr16_+_43363855_43363888	2.81636	Hoxa6	ENSMUST00000156367.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chrM_+_7005_7022	2.80419	Hoxa6	ENSMUST00000082405.1|mt-Co2|ENSMUSG00000064354.1|mitochondrially encoded cytochrome c oxidase II
mm10_v2_chr8_-_84773381_84773427	2.56351	Hoxa6	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr6_+_15185456_15185563	2.40197	Hoxa6	ENSMUST00000115472.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000115474.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000031545.7|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000137628.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr6_-_136171722_136171849	2.39646	Hoxa6	ENSMUST00000053880.6|Grin2b|ENSMUSG00000030209.8|glutamate receptor, ionotropic, NMDA2B (epsilon 2)
mm10_v2_chr6_+_15185439_15185452	2.28473	Hoxa6	ENSMUST00000118133.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr7_+_49910112_49910146	2.24232	Hoxa6	ENSMUST00000056442.5|Slc6a5|ENSMUSG00000039728.8|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm10_v2_chr13_+_63014934_63014934	2.21436	Hoxa6	ENSMUST00000091560.4|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr19_+_26748268_26748474	2.13533	Hoxa6	ENSMUST00000175791.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENSMUST00000176698.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENSMUST00000177252.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENSMUST00000176475.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENSMUST00000112637.2|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chrM_+_8600_8616	2.13043	Hoxa6	ENSMUST00000082409.1|mt-Co3|ENSMUSG00000064358.1|mitochondrially encoded cytochrome c oxidase III
mm10_v2_chr6_+_29859374_29859381	2.08977	Hoxa6	ENSMUST00000115238.3|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr9_-_61372187_61372211	2.07035	Hoxa6	ENSMUST00000098658.2|Gm10655|ENSMUSG00000074256.2|predicted gene 10655
mm10_v2_chr4_+_11579647_11579674	1.86624	Hoxa6	ENSMUST00000180239.1|Fsbp|ENSMUSG00000094595.1|fibrinogen silencer binding protein
mm10_v2_chr12_-_86892540_86892569	1.82984	Hoxa6	ENSMUST00000181290.1|Gm26698|ENSMUSG00000097208.1|predicted gene, 26698
mm10_v2_chr13_+_40704005_40704005	1.82199	Hoxa6	ENSMUST00000069457.1|Gm9979|ENSMUSG00000055732.1|predicted gene 9979
mm10_v2_chr14_-_48665098_48665246	1.81113	Hoxa6	ENSMUST00000118578.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr7_-_37773555_37773641	1.77666	Hoxa6	ENSMUST00000176534.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr13_-_40730416_40730429	1.7626	Hoxa6	ENSMUST00000021787.5|Tfap2a|ENSMUSG00000021359.9|transcription factor AP-2, alpha
mm10_v2_chr4_-_42168603_42168603	1.76039	Hoxa6	ENSMUST00000098121.3|Gm13305|ENSMUSG00000073876.3|predicted gene 13305
mm10_v2_chr14_-_48662740_48662872	1.73492	Hoxa6	ENSMUST00000122009.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr17_-_90088343_90088373	1.73418	Hoxa6	ENSMUST00000173917.1|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr14_-_12345847_12345872	1.70052	Hoxa6	ENSMUST00000022262.4|Fezf2|ENSMUSG00000021743.5|Fez family zinc finger 2
mm10_v2_chr5_+_115235836_115235836	1.69986	Hoxa6	ENSMUST00000081497.6|Pop5|ENSMUSG00000060152.8|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
mm10_v2_chrM_+_10167_10167	1.68569	Hoxa6	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr14_-_122451109_122451121	1.66682	Hoxa6	ENSMUST00000081580.2|Gm5089|ENSMUSG00000064052.2|predicted gene 5089
mm10_v2_chr16_+_43364145_43364204	1.66385	Hoxa6	ENSMUST00000148775.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr2_-_58052832_58052870	1.64075	Hoxa6	ENSMUST00000090940.5|Ermn|ENSMUSG00000026830.9|ermin, ERM-like protein
mm10_v2_chr4_-_21685782_21685805	1.63011	Hoxa6	ENSMUST00000076206.4|Prdm13|ENSMUSG00000040478.8|PR domain containing 13
mm10_v2_chr2_-_28916412_28916440	1.61665	Hoxa6	ENSMUST00000050776.2|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila) 	ENSMUST00000113849.1|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila)
mm10_v2_chr2_-_28916668_28916668	1.6008	Hoxa6	ENSMUST00000113847.1|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila)
mm10_v2_chr3_+_102010138_102010171	1.58706	Hoxa6	ENSMUST00000066187.4|Nhlh2|ENSMUSG00000048540.7|nescient helix loop helix 2
mm10_v2_chr8_+_22624019_22624043	1.57082	Hoxa6	ENSMUST00000033936.6|Dkk4|ENSMUSG00000031535.6|dickkopf homolog 4 (Xenopus laevis)
mm10_v2_chr2_+_132847719_132847743	1.55631	Hoxa6	ENSMUST00000124836.1|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1 	ENSMUST00000154160.1|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1
mm10_v2_chr10_+_90576570_90576668	1.54994	Hoxa6	ENSMUST00000182786.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182600.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr12_-_56613270_56613291	1.53348	Hoxa6	ENSMUST00000072631.5|Nkx2-9|ENSMUSG00000058669.7|NK2 homeobox 9
mm10_v2_chr4_-_14621669_14621786	1.52676	Hoxa6	ENSMUST00000143105.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr19_-_59170978_59170978	1.52637	Hoxa6	ENSMUST00000172821.2|Vax1|ENSMUSG00000006270.6|ventral anterior homeobox containing gene 1
mm10_v2_chr19_+_26750939_26750967	1.52121	Hoxa6	ENSMUST00000175953.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr17_+_43952999_43953063	1.4988	Hoxa6	ENSMUST00000177857.1|Rcan2|ENSMUSG00000039601.9|regulator of calcineurin 2
mm10_v2_chr5_+_90460889_90460908	1.48506	Hoxa6	ENSMUST00000031314.8|Alb|ENSMUSG00000029368.9|albumin
mm10_v2_chr10_+_90576252_90576517	1.47883	Hoxa6	ENSMUST00000182427.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182053.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182113.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr2_-_74659861_74659861	1.44924	Hoxa6	ENSMUST00000001867.6|Evx2|ENSMUSG00000001815.9|even skipped homeotic gene 2 homolog
mm10_v2_chr2_+_71528657_71528683	1.40213	Hoxa6	ENSMUST00000126400.1|Dlx1|ENSMUSG00000041911.3|distal-less homeobox 1
mm10_v2_chr17_-_44814649_44814797	1.39942	Hoxa6	ENSMUST00000113571.3|Runx2|ENSMUSG00000039153.10|runt related transcription factor 2
mm10_v2_chr13_-_83729544_83729584	1.3937	Hoxa6	ENSMUST00000181705.1|Gm26803|ENSMUSG00000097265.1|predicted gene, 26803
mm10_v2_chr2_+_109692436_109692544	1.3852	Hoxa6	ENSMUST00000111050.3|Bdnf|ENSMUSG00000048482.8|brain derived neurotrophic factor
mm10_v2_chr1_+_6730051_6730117	1.37853	Hoxa6	ENSMUST00000043578.6|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000131467.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000150761.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000151281.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr9_+_43744399_43744576	1.35689	Hoxa6	ENSMUST00000034510.7|Pvrl1|ENSMUSG00000032012.7|poliovirus receptor-related 1
mm10_v2_chr2_+_61804453_61804538	1.33917	Hoxa6	ENSMUST00000048934.8|Tbr1|ENSMUSG00000035033.9|T-box brain gene 1
mm10_v2_chr1_-_165934900_165935036	1.32532	Hoxa6	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr3_+_118430299_118430368	1.32213	Hoxa6	ENSMUST00000180774.1|Gm26871|ENSMUSG00000097311.1|predicted gene, 26871
mm10_v2_chr3_-_131344892_131344940	1.30569	Hoxa6	ENSMUST00000090246.4|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2 	ENSMUST00000126569.1|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2
mm10_v2_chr3_+_115080965_115081036	1.30477	Hoxa6	ENSMUST00000051309.8|Olfm3|ENSMUSG00000027965.9|olfactomedin 3
mm10_v2_chr1_+_19212054_19212106	1.2675	Hoxa6	ENSMUST00000064976.4|Tfap2b|ENSMUSG00000025927.7|transcription factor AP-2 beta
mm10_v2_chr13_-_91388079_91388090	1.2361	Hoxa6	ENSMUST00000181054.1|A830009L08Rik|ENSMUSG00000097182.1|RIKEN cDNA A830009L08 gene
mm10_v2_chr11_+_116657106_116657117	1.22135	Hoxa6	ENSMUST00000116318.2|Gm11744|ENSMUSG00000075410.6|predicted gene 11744
mm10_v2_chr5_+_90518932_90518956	1.21284	Hoxa6	ENSMUST00000113179.2|Afm|ENSMUSG00000029369.11|afamin 	ENSMUST00000128740.1|Afm|ENSMUSG00000029369.11|afamin
mm10_v2_chr11_-_99521258_99521295	1.20964	Hoxa6	ENSMUST00000076948.1|Krt39|ENSMUSG00000064165.2|keratin 39
mm10_v2_chr12_-_31713873_31713947	1.20209	Hoxa6	ENSMUST00000057783.4|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000174480.2|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000176710.1|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22
mm10_v2_chr4_-_49408042_49408151	1.19166	Hoxa6	ENSMUST00000081541.2|Acnat2|ENSMUSG00000060317.3|acyl-coenzyme A amino acid N-acyltransferase 2
mm10_v2_chr11_+_96286623_96286653	1.17624	Hoxa6	ENSMUST00000049352.7|Hoxb7|ENSMUSG00000038721.8|homeobox B7
mm10_v2_chr4_-_110292719_110292732	1.17526	Hoxa6	ENSMUST00000106601.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr4_-_82705735_82705754	1.17525	Hoxa6	ENSMUST00000155821.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr19_+_56287911_56287936	1.17247	Hoxa6	ENSMUST00000095948.4|Habp2|ENSMUSG00000025075.8|hyaluronic acid binding protein 2
mm10_v2_chr19_+_22692613_22692630	1.17119	Hoxa6	ENSMUST00000099564.2|Trpm3|ENSMUSG00000052387.9|transient receptor potential cation channel, subfamily M, member 3 	ENSMUST00000099566.3|Trpm3|ENSMUSG00000052387.9|transient receptor potential cation channel, subfamily M, member 3
mm10_v2_chr4_+_107968332_107968424	1.15885	Hoxa6	ENSMUST00000106713.3|Slc1a7|ENSMUSG00000008932.9|solute carrier family 1 (glutamate transporter), member 7
mm10_v2_chr5_-_66080971_66081009	1.15631	Hoxa6	ENSMUST00000127275.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47 	ENSMUST00000113724.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47
mm10_v2_chr10_+_90576678_90576691	1.14352	Hoxa6	ENSMUST00000182284.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr11_-_24075054_24075054	1.13568	Hoxa6	ENSMUST00000068360.1|A830031A19Rik|ENSMUSG00000055010.1|RIKEN cDNA A830031A19 gene
mm10_v2_chr11_-_99521336_99521340	1.13473	Hoxa6	ENSMUST00000107445.1|Krt39|ENSMUSG00000064165.2|keratin 39
mm10_v2_chr4_-_110287479_110287534	1.1344	Hoxa6	ENSMUST00000106598.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) 	ENSMUST00000102723.4|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) 	ENSMUST00000153906.1|Elavl4|ENSMUSG00000028546.11|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm10_v2_chr10_+_90576777_90576815	1.12238	Hoxa6	ENSMUST00000183136.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182595.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr3_-_138131356_138131381	1.11971	Hoxa6	ENSMUST00000029805.8|Mttp|ENSMUSG00000028158.8|microsomal triglyceride transfer protein
mm10_v2_chr2_-_33942111_33942151	1.11794	Hoxa6	ENSMUST00000130988.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403 	ENSMUST00000127936.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403 	ENSMUST00000134271.1|Gm13403|ENSMUSG00000085987.1|predicted gene 13403
mm10_v2_chr18_-_84086379_84086404	1.11189	Hoxa6	ENSMUST00000060303.8|Tshz1|ENSMUSG00000046982.9|teashirt zinc finger family member 1
mm10_v2_chr12_-_104473236_104473324	1.09607	Hoxa6	ENSMUST00000021513.4|Gsc|ENSMUSG00000021095.4|goosecoid homeobox
mm10_v2_chr7_-_84679346_84679401	1.08898	Hoxa6	ENSMUST00000069537.2|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6 	ENSMUST00000178385.1|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6
mm10_v2_chr8_+_47822143_47822143	1.08106	Hoxa6	ENSMUST00000079639.2|Cldn24|ENSMUSG00000061974.2|claudin 24
mm10_v2_chr10_+_90576708_90576766	1.07543	Hoxa6	ENSMUST00000182430.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182960.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182045.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000182083.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr3_+_125404292_125404340	1.0719	Hoxa6	ENSMUST00000144344.1|Ndst4|ENSMUSG00000027971.10|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm10_v2_chr2_+_116067933_116067975	1.05164	Hoxa6	ENSMUST00000156095.1|G630016G05Rik|ENSMUSG00000086308.1|RIKEN cDNA G630016G05 gene
mm10_v2_chr2_+_79707780_79707927	1.02446	Hoxa6	ENSMUST00000090760.2|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENSMUST00000040863.4|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENSMUST00000111780.2|Ppp1r1c|ENSMUSG00000034683.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm10_v2_chr1_-_132707304_132707326	1.02375	Hoxa6	ENSMUST00000043189.7|Nfasc|ENSMUSG00000026442.8|neurofascin
mm10_v2_chr2_+_181767040_181767073	1.02188	Hoxa6	ENSMUST00000108756.1|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr10_-_42583628_42583639	1.01585	Hoxa6	ENSMUST00000019938.4|Nr2e1|ENSMUSG00000019803.5|nuclear receptor subfamily 2, group E, member 1
mm10_v2_chr1_+_187997835_187997882	1.01576	Hoxa6	ENSMUST00000110938.1|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr1_+_177445660_177445821	0.997475	Hoxa6	ENSMUST00000077225.6|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr16_-_88056176_88056176	0.988446	Hoxa6	ENSMUST00000072256.5|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1 	ENSMUST00000023652.8|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1 	ENSMUST00000114137.1|Grik1|ENSMUSG00000022935.8|glutamate receptor, ionotropic, kainate 1
mm10_v2_chr5_+_118169712_118169748	0.98755	Hoxa6	ENSMUST00000054836.6|Hrk|ENSMUSG00000046607.6|harakiri, BCL2 interacting protein (contains only BH3 domain)
mm10_v2_chrM_+_7759_7927	0.985948	Hoxa6	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr3_-_37125943_37125969	0.984115	Hoxa6	ENSMUST00000029275.5|Il2|ENSMUSG00000027720.7|interleukin 2
mm10_v2_chr4_-_14621494_14621506	0.979214	Hoxa6	ENSMUST00000149633.1|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr6_-_138426735_138426816	0.979198	Hoxa6	ENSMUST00000162932.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3
mm10_v2_chr19_+_56287943_56287996	0.972468	Hoxa6	ENSMUST00000166049.1|Habp2|ENSMUSG00000025075.8|hyaluronic acid binding protein 2
mm10_v2_chr1_+_104768510_104768529	0.966158	Hoxa6	ENSMUST00000062528.8|Cdh20|ENSMUSG00000050840.8|cadherin 20
mm10_v2_chr19_-_19001099_19001119	0.950209	Hoxa6	ENSMUST00000040153.8|Rorb|ENSMUSG00000036192.9|RAR-related orphan receptor beta 	ENSMUST00000112828.1|Rorb|ENSMUSG00000036192.9|RAR-related orphan receptor beta
mm10_v2_chr7_-_37772868_37772891	0.945734	Hoxa6	ENSMUST00000176205.1|Zfp536|ENSMUSG00000043456.10|zinc finger protein 536
mm10_v2_chr7_-_49636847_49636851	0.945295	Hoxa6	ENSMUST00000032717.6|Dbx1|ENSMUSG00000030507.6|developing brain homeobox 1
mm10_v2_chr9_-_48964990_48964990	0.93793	Hoxa6	ENSMUST00000008734.4|Htr3b|ENSMUSG00000008590.4|5-hydroxytryptamine (serotonin) receptor 3B
mm10_v2_chr6_+_15196949_15197102	0.935647	Hoxa6	ENSMUST00000151301.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000131414.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000140557.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2 	ENSMUST00000115469.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr6_+_34598530_34598587	0.930421	Hoxa6	ENSMUST00000115027.1|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000115026.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr5_-_48889531_48889557	0.921306	Hoxa6	ENSMUST00000176978.1|Kcnip4|ENSMUSG00000029088.10|Kv channel interacting protein 4
mm10_v2_chr9_-_71163224_71163293	0.896858	Hoxa6	ENSMUST00000074465.2|Aqp9|ENSMUSG00000032204.7|aquaporin 9
mm10_v2_chr16_+_19028232_19028232	0.888329	Hoxa6	ENSMUST00000074116.4|Gm10088|ENSMUSG00000060811.4|predicted gene 10088
mm10_v2_chr17_+_70561739_70561787	0.885711	Hoxa6	ENSMUST00000097288.2|Dlgap1|ENSMUSG00000003279.10|discs, large (Drosophila) homolog-associated protein 1
mm10_v2_chr11_+_96365752_96365752	0.879229	Hoxa6	ENSMUST00000019117.2|Hoxb1|ENSMUSG00000018973.2|homeobox B1
mm10_v2_chr2_-_36104060_36104073	0.874555	Hoxa6	ENSMUST00000112961.3|Lhx6|ENSMUSG00000026890.13|LIM homeobox protein 6 	ENSMUST00000112966.3|Lhx6|ENSMUSG00000026890.13|LIM homeobox protein 6
mm10_v2_chrM_+_2743_2761	0.873655	Hoxa6	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr8_-_67818218_67818269	0.872672	Hoxa6	ENSMUST00000059374.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr9_+_61372359_61372383	0.86424	Hoxa6	ENSMUST00000178113.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl) 	ENSMUST00000159386.1|Tle3|ENSMUSG00000032280.10|transducin-like enhancer of split 3, homolog of Drosophila E(spl)
mm10_v2_chr11_-_99374895_99374909	0.856902	Hoxa6	ENSMUST00000006963.2|Krt28|ENSMUSG00000055937.1|keratin 28
mm10_v2_chr10_+_101681487_101681662	0.855294	Hoxa6	ENSMUST00000179929.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000127504.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr10_+_52391606_52391610	0.85143	Hoxa6	ENSMUST00000067085.4|Nepn|ENSMUSG00000038624.11|nephrocan
mm10_v2_chr10_+_90576872_90576992	0.84615	Hoxa6	ENSMUST00000182550.1|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B 	ENSMUST00000099364.5|Anks1b|ENSMUSG00000058589.8|ankyrin repeat and sterile alpha motif domain containing 1B
mm10_v2_chr1_+_177444653_177444669	0.836677	Hoxa6	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr2_-_63184170_63184195	0.835348	Hoxa6	ENSMUST00000112452.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr2_-_63184253_63184292	0.832267	Hoxa6	ENSMUST00000075052.3|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7 	ENSMUST00000112454.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr6_-_144209471_144209487	0.83198	Hoxa6	ENSMUST00000038815.7|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr2_-_64097994_64098023	0.827575	Hoxa6	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr1_+_187997821_187997834	0.81997	Hoxa6	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr11_-_33203588_33203599	0.816216	Hoxa6	ENSMUST00000037746.6|Tlx3|ENSMUSG00000040610.6|T cell leukemia, homeobox 3
mm10_v2_chr8_-_67974567_67974596	0.808122	Hoxa6	ENSMUST00000098696.3|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000038959.9|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000093469.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr18_-_23041641_23041671	0.803141	Hoxa6	ENSMUST00000097651.3|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr2_-_35061431_35061447	0.795	Hoxa6	ENSMUST00000028233.3|Hc|ENSMUSG00000026874.4|hemolytic complement
mm10_v2_chr4_-_91399984_91400007	0.791328	Hoxa6	ENSMUST00000102799.3|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr2_+_74691090_74691090	0.788719	Hoxa6	ENSMUST00000061745.3|Hoxd10|ENSMUSG00000050368.3|homeobox D10
mm10_v2_chr9_+_44398176_44398176	0.784076	Hoxa6	ENSMUST00000165839.1|Slc37a4|ENSMUSG00000032114.8|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm10_v2_chr14_-_48667508_48667644	0.780369	Hoxa6	ENSMUST00000144465.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila) 	ENSMUST00000133479.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila) 	ENSMUST00000119070.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila) 	ENSMUST00000152018.1|Otx2|ENSMUSG00000021848.9|orthodenticle homolog 2 (Drosophila)
mm10_v2_chr16_-_92400067_92400083	0.777849	Hoxa6	ENSMUST00000023672.8|Rcan1|ENSMUSG00000022951.9|regulator of calcineurin 1
mm10_v2_chr6_+_104493220_104493248	0.777764	Hoxa6	ENSMUST00000162872.1|Cntn6|ENSMUSG00000030092.8|contactin 6
mm10_v2_chr2_+_74721978_74722074	0.774775	Hoxa6	ENSMUST00000047904.3|Hoxd3|ENSMUSG00000079277.3|homeobox D3
mm10_v2_chr1_+_81077204_81077252	0.774365	Hoxa6	ENSMUST00000123720.1|Nyap2|ENSMUSG00000054976.8|neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2
mm10_v2_chr6_-_144209448_144209469	0.772716	Hoxa6	ENSMUST00000077160.5|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr2_+_20737306_20737321	0.768532	Hoxa6	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr13_-_18382041_18382041	0.759876	Hoxa6	ENSMUST00000139064.2|Pou6f2|ENSMUSG00000009734.11|POU domain, class 6, transcription factor 2 	ENSMUST00000175703.2|Pou6f2|ENSMUSG00000009734.11|POU domain, class 6, transcription factor 2
mm10_v2_chr6_+_104492790_104492965	0.757181	Hoxa6	ENSMUST00000161446.1|Cntn6|ENSMUSG00000030092.8|contactin 6 	ENSMUST00000161070.1|Cntn6|ENSMUSG00000030092.8|contactin 6 	ENSMUST00000089215.5|Cntn6|ENSMUSG00000030092.8|contactin 6
mm10_v2_chr11_+_100320596_100320708	0.741294	Hoxa6	ENSMUST00000152521.1|Eif1|ENSMUSG00000035530.7|eukaryotic translation initiation factor 1
mm10_v2_chr1_+_6730135_6730176	0.73836	Hoxa6	ENSMUST00000155921.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr11_-_100088226_100088270	0.73792	Hoxa6	ENSMUST00000107419.1|Krt32|ENSMUSG00000046095.5|keratin 32
mm10_v2_chr9_+_43829963_43829963	0.73629	Hoxa6	ENSMUST00000180221.1|Gm3898|ENSMUSG00000096322.1|predicted gene 3898
mm10_v2_chr6_-_144209558_144209647	0.719529	Hoxa6	ENSMUST00000111749.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000170367.2|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr11_-_42000532_42000592	0.709111	Hoxa6	ENSMUST00000070735.3|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr1_+_6734827_6734874	0.708231	Hoxa6	ENSMUST00000139838.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr19_-_45235811_45235811	0.696892	Hoxa6	ENSMUST00000099401.4|Lbx1|ENSMUSG00000025216.8|ladybird homeobox homolog 1 (Drosophila)
mm10_v2_chr4_-_120815703_120815761	0.694974	Hoxa6	ENSMUST00000120779.1|Nfyc|ENSMUSG00000032897.11|nuclear transcription factor-Y gamma
mm10_v2_chr11_+_78826575_78826618	0.694668	Hoxa6	ENSMUST00000147875.2|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9 	ENSMUST00000141321.1|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9
mm10_v2_chr5_-_67099045_67099063	0.693393	Hoxa6	ENSMUST00000174251.1|Phox2b|ENSMUSG00000012520.8|paired-like homeobox 2b
mm10_v2_chr6_+_34598500_34598529	0.692232	Hoxa6	ENSMUST00000079391.3|Cald1|ENSMUSG00000029761.10|caldesmon 1 	ENSMUST00000142512.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr14_-_124677089_124677127	0.687739	Hoxa6	ENSMUST00000095529.3|Fgf14|ENSMUSG00000025551.7|fibroblast growth factor 14
mm10_v2_chr9_-_37669170_37669226	0.656688	Hoxa6	ENSMUST00000011262.2|Panx3|ENSMUSG00000011118.3|pannexin 3
mm10_v2_chr11_-_42000834_42000867	0.651809	Hoxa6	ENSMUST00000070725.4|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr11_+_96292453_96292508	0.647148	Hoxa6	ENSMUST00000173432.1|Hoxb6|ENSMUSG00000000690.4|homeobox B6
mm10_v2_chr8_-_109251698_109251728	0.639657	Hoxa6	ENSMUST00000079189.3|4922502B01Rik|ENSMUSG00000057387.3|RIKEN cDNA 4922502B01 gene
mm10_v2_chr9_-_87731248_87731273	0.638097	Hoxa6	ENSMUST00000034991.7|Tbx18|ENSMUSG00000032419.7|T-box18
mm10_v2_chr6_+_29859662_29859685	0.624136	Hoxa6	ENSMUST00000128927.2|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr1_-_12991109_12991177	0.62208	Hoxa6	ENSMUST00000115403.2|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1 	ENSMUST00000115402.1|Slco5a1|ENSMUSG00000025938.10|solute carrier organic anion transporter family, member 5A1
mm10_v2_chr10_-_92164666_92164754	0.617215	Hoxa6	ENSMUST00000183123.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA) 	ENSMUST00000182033.1|Rmst|ENSMUSG00000097348.2|rhabdomyosarcoma 2 associated transcript (non-coding RNA)
mm10_v2_chr8_-_67818284_67818320	0.614921	Hoxa6	ENSMUST00000120071.1|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr6_+_34709442_34709497	0.606845	Hoxa6	ENSMUST00000115021.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr11_+_94044331_94044365	0.596563	Hoxa6	ENSMUST00000024979.8|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr13_+_80883403_80883422	0.591851	Hoxa6	ENSMUST00000099356.2|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr4_-_97584605_97584610	0.589547	Hoxa6	ENSMUST00000107067.1|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr6_+_96113146_96113170	0.587392	Hoxa6	ENSMUST00000122120.1|Fam19a1|ENSMUSG00000059187.6|family with sequence similarity 19, member A1
mm10_v2_chr9_+_46998931_46998931	0.580135	Hoxa6	ENSMUST00000178065.1|Gm4791|ENSMUSG00000094893.1|predicted gene 4791
mm10_v2_chr13_+_42681513_42681564	0.575569	Hoxa6	ENSMUST00000149235.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr2_+_101624696_101624730	0.574398	Hoxa6	ENSMUST00000044031.3|Rag2|ENSMUSG00000032864.4|recombination activating gene 2
mm10_v2_chr3_+_125404072_125404131	0.569258	Hoxa6	ENSMUST00000173932.1|Ndst4|ENSMUSG00000027971.10|N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4
mm10_v2_chrX_-_43274786_43274786	0.564767	Hoxa6	ENSMUST00000016294.7|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1
mm10_v2_chr5_-_106574706_106574727	0.555486	Hoxa6	ENSMUST00000131029.1|RP24-421H18.1|ENSMUSG00000099061.1|RP24-421H18.1	ENSMUST00000124394.2|RP24-421H18.1|ENSMUSG00000099061.1|RP24-421H18.1
mm10_v2_chr9_-_105521147_105521265	0.54957	Hoxa6	ENSMUST00000176770.1|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering 	ENSMUST00000085133.6|Atp2c1|ENSMUSG00000032570.10|ATPase, Ca++-sequestering
mm10_v2_chr9_+_32116040_32116136	0.543832	Hoxa6	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr6_-_138421379_138421452	0.532235	Hoxa6	ENSMUST00000163065.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3
mm10_v2_chr6_+_80018877_80018945	0.532175	Hoxa6	ENSMUST00000147663.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4 	ENSMUST00000128718.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4 	ENSMUST00000126005.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4 	ENSMUST00000133918.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4
mm10_v2_chr2_-_76889753_76889925	0.532126	Hoxa6	ENSMUST00000148747.1|Ttn|ENSMUSG00000051747.8|titin
mm10_v2_chr9_+_118478182_118478212	0.527677	Hoxa6	ENSMUST00000111763.1|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr13_-_53473074_53473074	0.523309	Hoxa6	ENSMUST00000021922.8|Msx2|ENSMUSG00000021469.8|msh homeobox 2
mm10_v2_chr3_+_93393696_93393699	0.521887	Hoxa6	ENSMUST00000045912.2|Rptn|ENSMUSG00000041984.2|repetin
mm10_v2_chr6_-_52165413_52165413	0.519449	Hoxa6	ENSMUST00000014848.8|Hoxa2|ENSMUSG00000014704.8|homeobox A2
mm10_v2_chr13_+_55399648_55399700	0.516553	Hoxa6	ENSMUST00000057167.7|Slc34a1|ENSMUSG00000021490.10|solute carrier family 34 (sodium phosphate), member 1
mm10_v2_chr3_-_26133734_26133734	0.499968	Hoxa6	ENSMUST00000108308.3|Nlgn1|ENSMUSG00000063887.7|neuroligin 1 	ENSMUST00000075054.4|Nlgn1|ENSMUSG00000063887.7|neuroligin 1
mm10_v2_chr2_+_181767283_181767322	0.499791	Hoxa6	ENSMUST00000108757.2|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr11_+_94044241_94044273	0.498888	Hoxa6	ENSMUST00000103168.3|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr6_-_138422898_138422999	0.495073	Hoxa6	ENSMUST00000161450.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3 	ENSMUST00000163024.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3 	ENSMUST00000162185.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3
mm10_v2_chr3_+_41563356_41563392	0.490823	Hoxa6	ENSMUST00000163764.1|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr9_-_101198999_101199080	0.481559	Hoxa6	ENSMUST00000066773.7|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr4_-_14621805_14621819	0.475723	Hoxa6	ENSMUST00000042221.7|Slc26a7|ENSMUSG00000040569.7|solute carrier family 26, member 7
mm10_v2_chr12_+_21417872_21417911	0.473704	Hoxa6	ENSMUST00000180671.1|Gm4419|ENSMUSG00000097055.1|predicted gene 4419
mm10_v2_chr11_+_94044194_94044238	0.473335	Hoxa6	ENSMUST00000092777.4|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9 	ENSMUST00000075695.6|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr14_+_28511344_28511405	0.466222	Hoxa6	ENSMUST00000112272.1|Wnt5a|ENSMUSG00000021994.8|wingless-related MMTV integration site 5A
mm10_v2_chr4_-_97584612_97584643	0.455555	Hoxa6	ENSMUST00000107068.2|E130114P18Rik|ENSMUSG00000048747.8|RIKEN cDNA E130114P18 gene
mm10_v2_chr16_-_95459245_95459384	0.450599	Hoxa6	ENSMUST00000176345.1|Erg|ENSMUSG00000040732.12|avian erythroblastosis virus E-26 (v-ets) oncogene related 	ENSMUST00000121809.2|Erg|ENSMUSG00000040732.12|avian erythroblastosis virus E-26 (v-ets) oncogene related 	ENSMUST00000118113.1|Erg|ENSMUSG00000040732.12|avian erythroblastosis virus E-26 (v-ets) oncogene related 	ENSMUST00000122199.1|Erg|ENSMUSG00000040732.12|avian erythroblastosis virus E-26 (v-ets) oncogene related
mm10_v2_chr1_+_40580227_40580302	0.444927	Hoxa6	ENSMUST00000027233.7|Slc9a4|ENSMUSG00000026065.7|solute carrier family 9 (sodium/hydrogen exchanger), member 4
mm10_v2_chr3_+_13946368_13946379	0.44322	Hoxa6	ENSMUST00000171075.1|Ralyl|ENSMUSG00000039717.9|RALY RNA binding protein-like 	ENSMUST00000108372.2|Ralyl|ENSMUSG00000039717.9|RALY RNA binding protein-like
mm10_v2_chr5_-_147307264_147307281	0.441877	Hoxa6	ENSMUST00000031650.3|Cdx2|ENSMUSG00000029646.3|caudal type homeobox 2
mm10_v2_chr4_+_114821722_114821722	0.436849	Hoxa6	ENSMUST00000137570.1|Gm12830|ENSMUSG00000055198.3|predicted gene 12830
mm10_v2_chr11_+_96282529_96282556	0.436756	Hoxa6	ENSMUST00000125410.1|Hoxb8|ENSMUSG00000056648.4|homeobox B8
mm10_v2_chr8_+_58911755_58911755	0.434692	Hoxa6	ENSMUST00000062978.6|BC030500|ENSMUSG00000049946.7|cDNA sequence BC030500
mm10_v2_chr19_+_27322539_27322592	0.433639	Hoxa6	ENSMUST00000056708.3|Kcnv2|ENSMUSG00000047298.3|potassium channel, subfamily V, member 2
mm10_v2_chr1_-_25228814_25228834	0.432859	Hoxa6	ENSMUST00000126626.1|Bai3|ENSMUSG00000033569.11|brain-specific angiogenesis inhibitor 3
mm10_v2_chr4_-_82885148_82885148	0.427458	Hoxa6	ENSMUST00000048430.3|Cer1|ENSMUSG00000038192.5|cerberus 1 homolog (Xenopus laevis)
mm10_v2_chr10_+_102159000_102159079	0.422354	Hoxa6	ENSMUST00000020039.6|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr5_+_88487982_88487982	0.422206	Hoxa6	ENSMUST00000031222.8|Enam|ENSMUSG00000029286.8|enamelin
mm10_v2_chr9_+_118478344_118478451	0.416636	Hoxa6	ENSMUST00000035020.8|Eomes|ENSMUSG00000032446.8|eomesodermin homolog (Xenopus laevis)
mm10_v2_chr11_-_99285260_99285264	0.411834	Hoxa6	ENSMUST00000017255.3|Krt24|ENSMUSG00000020913.3|keratin 24
mm10_v2_chr1_-_71414881_71414915	0.407324	Hoxa6	ENSMUST00000087268.5|Abca12|ENSMUSG00000050296.8|ATP-binding cassette, sub-family A (ABC1), member 12
mm10_v2_chr9_-_70934808_70934847	0.406567	Hoxa6	ENSMUST00000034731.8|Lipc|ENSMUSG00000032207.9|lipase, hepatic
mm10_v2_chr6_+_106118924_106119006	0.404364	Hoxa6	ENSMUST00000079416.5|Cntn4|ENSMUSG00000064293.8|contactin 4
mm10_v2_chr11_-_42000284_42000356	0.400347	Hoxa6	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr2_+_83956398_83956398	0.394481	Hoxa6	ENSMUST00000178325.1|Gm13698|ENSMUSG00000094125.1|predicted gene 13698
mm10_v2_chr9_-_29963112_29963141	0.391915	Hoxa6	ENSMUST00000075069.4|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr6_-_97459279_97459303	0.391363	Hoxa6	ENSMUST00000113359.1|Frmd4b|ENSMUSG00000030064.10|FERM domain containing 4B
mm10_v2_chr16_-_64786321_64786321	0.389105	Hoxa6	ENSMUST00000052588.4|Zfp654|ENSMUSG00000047141.4|zinc finger protein 654
mm10_v2_chr3_+_55461758_55461961	0.382822	Hoxa6	ENSMUST00000070418.4|Dclk1|ENSMUSG00000027797.9|doublecortin-like kinase 1
mm10_v2_chr11_-_96747419_96747436	0.381438	Hoxa6	ENSMUST00000181758.1|2010300F17Rik|ENSMUSG00000097289.1|RIKEN cDNA 2010300F17 gene
mm10_v2_chrX_-_88115632_88115675	0.370547	Hoxa6	ENSMUST00000113966.1|Il1rapl1|ENSMUSG00000052372.4|interleukin 1 receptor accessory protein-like 1 	ENSMUST00000113964.1|Il1rapl1|ENSMUSG00000052372.4|interleukin 1 receptor accessory protein-like 1
mm10_v2_chr6_+_80019008_80019048	0.365602	Hoxa6	ENSMUST00000126399.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4 	ENSMUST00000136421.1|Lrrtm4|ENSMUSG00000052581.7|leucine rich repeat transmembrane neuronal 4
mm10_v2_chr10_+_127420867_127420916	0.360181	Hoxa6	ENSMUST00000064793.6|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr11_-_37235882_37235994	0.35715	Hoxa6	ENSMUST00000102801.1|Tenm2|ENSMUSG00000049336.10|teneurin transmembrane protein 2
mm10_v2_chr2_+_74727074_74727201	0.356397	Hoxa6	ENSMUST00000111980.2|Hoxd3|ENSMUSG00000079277.3|homeobox D3
mm10_v2_chr1_+_137928100_137928170	0.352793	Hoxa6	ENSMUST00000054333.2|A130050O07Rik|ENSMUSG00000051480.2|RIKEN cDNA A130050O07 gene
mm10_v2_chr2_+_65930117_65930190	0.344719	Hoxa6	ENSMUST00000176109.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr8_-_58911627_58911627	0.344381	Hoxa6	ENSMUST00000077447.4|Galntl6|ENSMUSG00000061864.6|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
mm10_v2_chr7_-_73541738_73541758	0.338838	Hoxa6	ENSMUST00000169922.2|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr13_+_16014457_16014475	0.337612	Hoxa6	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr1_-_144567667_144567667	0.331091	Hoxa6	ENSMUST00000184008.1|Rgs21|ENSMUSG00000098509.1|regulator of G-protein signalling 21
mm10_v2_chr3_+_84952146_84952186	0.330407	Hoxa6	ENSMUST00000029727.7|Fbxw7|ENSMUSG00000028086.8|F-box and WD-40 domain protein 7
mm10_v2_chr2_+_26591423_26591435	0.327654	Hoxa6	ENSMUST00000152988.2|Egfl7|ENSMUSG00000026921.12|EGF-like domain 7 	ENSMUST00000149789.1|Egfl7|ENSMUSG00000026921.12|EGF-like domain 7
mm10_v2_chr5_-_123141067_123141094	0.319367	Hoxa6	ENSMUST00000162697.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000160321.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526 	ENSMUST00000159637.1|AI480526|ENSMUSG00000090086.1|expressed sequence AI480526
mm10_v2_chr18_+_54990280_54990315	0.31031	Hoxa6	ENSMUST00000181538.1|Gm4221|ENSMUSG00000096948.1|predicted gene 4221
mm10_v2_chr10_-_20725023_20725078	0.300235	Hoxa6	ENSMUST00000020165.7|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr15_+_28203726_28203752	0.295426	Hoxa6	ENSMUST00000067048.6|Dnah5|ENSMUSG00000022262.7|dynein, axonemal, heavy chain 5
mm10_v2_chr4_+_128688726_128688795	0.283522	Hoxa6	ENSMUST00000106080.1|Phc2|ENSMUSG00000028796.11|polyhomeotic-like 2 (Drosophila)
mm10_v2_chr5_+_117841839_117841857	0.28076	Hoxa6	ENSMUST00000142742.2|Nos1|ENSMUSG00000029361.12|nitric oxide synthase 1, neuronal
mm10_v2_chr6_+_29859686_29859710	0.278196	Hoxa6	ENSMUST00000134438.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr12_+_29528382_29528468	0.253453	Hoxa6	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr10_+_42860543_42860627	0.249575	Hoxa6	ENSMUST00000157071.1|Scml4|ENSMUSG00000044770.8|sex comb on midleg-like 4 (Drosophila)
mm10_v2_chr9_-_112187898_112187938	0.249091	Hoxa6	ENSMUST00000178410.1|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000172380.3|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr15_+_92597104_92597121	0.248737	Hoxa6	ENSMUST00000035399.8|Pdzrn4|ENSMUSG00000036218.9|PDZ domain containing RING finger 4
mm10_v2_chr11_+_67200137_67200148	0.24828	Hoxa6	ENSMUST00000129018.1|Myh1|ENSMUSG00000056328.8|myosin, heavy polypeptide 1, skeletal muscle, adult
mm10_v2_chr5_-_67099235_67099255	0.246167	Hoxa6	ENSMUST00000012664.8|Phox2b|ENSMUSG00000012520.8|paired-like homeobox 2b
mm10_v2_chr18_-_22850738_22850759	0.246163	Hoxa6	ENSMUST00000092015.4|Nol4|ENSMUSG00000041923.9|nucleolar protein 4 	ENSMUST00000069215.6|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr3_-_8964037_8964101	0.245648	Hoxa6	ENSMUST00000091354.5|Tpd52|ENSMUSG00000027506.9|tumor protein D52 	ENSMUST00000094381.4|Tpd52|ENSMUSG00000027506.9|tumor protein D52
mm10_v2_chr3_-_146770603_146770781	0.233457	Hoxa6	ENSMUST00000106138.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr2_+_153900374_153900395	0.218529	Hoxa6	ENSMUST00000088955.5|Bpifb6|ENSMUSG00000068009.5|BPI fold containing family B, member 6 	ENSMUST00000135501.1|Bpifb6|ENSMUSG00000068009.5|BPI fold containing family B, member 6
mm10_v2_chr3_-_79145875_79145930	0.200575	Hoxa6	ENSMUST00000118340.1|Rapgef2|ENSMUSG00000062232.8|Rap guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr2_+_125152505_125152606	0.19049	Hoxa6	ENSMUST00000110494.2|Slc12a1|ENSMUSG00000027202.6|solute carrier family 12, member 1 	ENSMUST00000028630.2|Slc12a1|ENSMUSG00000027202.6|solute carrier family 12, member 1 	ENSMUST00000110495.2|Slc12a1|ENSMUSG00000027202.6|solute carrier family 12, member 1
mm10_v2_chr14_-_46575847_46575855	0.18512	Hoxa6	ENSMUST00000151828.1|Gm15219|ENSMUSG00000085123.1|predicted gene 15219
mm10_v2_chr13_+_94875600_94875611	0.185003	Hoxa6	ENSMUST00000022195.10|Otp|ENSMUSG00000021685.10|orthopedia homolog (Drosophila)
mm10_v2_chr10_+_99263224_99263240	0.174109	Hoxa6	ENSMUST00000020118.4|Dusp6|ENSMUSG00000019960.7|dual specificity phosphatase 6
mm10_v2_chr2_-_60673654_60673731	0.171867	Hoxa6	ENSMUST00000059888.8|Itgb6|ENSMUSG00000026971.9|integrin beta 6 	ENSMUST00000154764.1|Itgb6|ENSMUSG00000026971.9|integrin beta 6
mm10_v2_chr12_-_11208948_11208948	0.167238	Hoxa6	ENSMUST00000049877.1|Msgn1|ENSMUSG00000047002.1|mesogenin 1
mm10_v2_chr9_+_120929216_120929251	0.167162	Hoxa6	ENSMUST00000130466.1|Ctnnb1|ENSMUSG00000006932.10|catenin (cadherin associated protein), beta 1
mm10_v2_chr4_+_19280850_19280907	0.15802	Hoxa6	ENSMUST00000102999.1|Cngb3|ENSMUSG00000056494.7|cyclic nucleotide gated channel beta 3
mm10_v2_chr3_+_76075583_76075583	0.154796	Hoxa6	ENSMUST00000160261.1|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr19_+_55895508_55895511	0.15252	Hoxa6	ENSMUST00000111646.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr13_-_84064772_84064808	0.149149	Hoxa6	ENSMUST00000182477.1|Gm17750|ENSMUSG00000098087.1|predicted gene, 17750
mm10_v2_chr5_-_23616528_23616597	0.12631	Hoxa6	ENSMUST00000088392.4|Srpk2|ENSMUSG00000062604.7|serine/arginine-rich protein specific kinase 2
mm10_v2_chr3_-_146770218_146770261	0.126053	Hoxa6	ENSMUST00000106137.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr3_+_55782500_55782521	0.125449	Hoxa6	ENSMUST00000075422.4|Mab21l1|ENSMUSG00000056947.4|mab-21-like 1 (C. elegans)
mm10_v2_chr11_+_96316684_96316684	0.123243	Hoxa6	ENSMUST00000049241.7|Hoxb4|ENSMUSG00000038692.7|homeobox B4
mm10_v2_chr17_-_44814581_44814595	0.116787	Hoxa6	ENSMUST00000159943.1|Runx2|ENSMUSG00000039153.10|runt related transcription factor 2
mm10_v2_chr1_-_30863256_30863256	0.112103	Hoxa6	ENSMUST00000088310.3|Phf3|ENSMUSG00000048874.9|PHD finger protein 3
mm10_v2_chr15_-_8710409_8710498	0.104872	Hoxa6	ENSMUST00000157065.1|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr6_-_119963733_119963836	0.100603	Hoxa6	ENSMUST00000161512.2|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1
mm10_v2_chr2_-_7081256_7081318	0.0984339	Hoxa6	ENSMUST00000183209.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr2_-_168206875_168206922	0.0913044	Hoxa6	ENSMUST00000057793.4|Adnp|ENSMUSG00000051149.9|activity-dependent neuroprotective protein
mm10_v2_chr2_+_72297895_72297912	0.0880329	Hoxa6	ENSMUST00000144111.1|Zak|ENSMUSG00000004085.8|sterile alpha motif and leucine zipper containing kinase AZK
mm10_v2_chr11_+_96282648_96282725	0.0791205	Hoxa6	ENSMUST00000168043.1|Hoxb8|ENSMUSG00000056648.4|homeobox B8
mm10_v2_chr5_+_104299171_104299296	0.0659293	Hoxa6	ENSMUST00000031246.8|Ibsp|ENSMUSG00000029306.8|integrin binding sialoprotein
mm10_v2_chr2_+_9882622_9882646	0.0640608	Hoxa6	ENSMUST00000114919.1|4930412O13Rik|ENSMUSG00000025783.2|RIKEN cDNA 4930412O13 gene
mm10_v2_chr17_-_44814604_44814637	0.0599608	Hoxa6	ENSMUST00000160673.1|Runx2|ENSMUSG00000039153.10|runt related transcription factor 2
mm10_v2_chr15_-_8710734_8710764	0.0351185	Hoxa6	ENSMUST00000005493.7|Slc1a3|ENSMUSG00000005360.8|solute carrier family 1 (glial high affinity glutamate transporter), member 3
mm10_v2_chr2_-_79456750_79456761	0.0329891	Hoxa6	ENSMUST00000041099.4|Neurod1|ENSMUSG00000034701.9|neurogenic differentiation 1
mm10_v2_chr13_+_42680565_42680623	0.0268353	Hoxa6	ENSMUST00000128646.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr19_-_28911879_28911879	0.0266222	Hoxa6	ENSMUST00000179171.1|AC163993.1|ENSMUSG00000095556.1|AC163993.1
mm10_v2_chr16_-_56712825_56712976	0.0235675	Hoxa6	ENSMUST00000136394.1|Tfg|ENSMUSG00000022757.12|Trk-fused gene
mm10_v2_chr10_-_20724696_20724849	0.0179741	Hoxa6	ENSMUST00000170265.1|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr1_+_70725715_70725830	0.0165588	Hoxa6	ENSMUST00000053922.5|Vwc2l|ENSMUSG00000045648.9|von Willebrand factor C domain-containing protein 2-like
mm10_v2_chr9_-_80465429_80465481	0.00203241	Hoxa6	ENSMUST00000085289.5|Impg1|ENSMUSG00000032343.9|interphotoreceptor matrix proteoglycan 1 	ENSMUST00000185068.1|Impg1|ENSMUSG00000032343.9|interphotoreceptor matrix proteoglycan 1 	ENSMUST00000113250.3|Impg1|ENSMUSG00000032343.9|interphotoreceptor matrix proteoglycan 1
