mm10_v2_chr4_-_61674094_61674136	10.8932	Hoxa4	ENSMUST00000098040.3|Mup18|ENSMUSG00000078674.2|major urinary protein 18
mm10_v2_chr4_-_60222580_60222599	10.0476	Hoxa4	ENSMUST00000095058.4|Mup8|ENSMUSG00000078687.3|major urinary protein 8 	ENSMUST00000163931.1|Mup8|ENSMUSG00000078687.3|major urinary protein 8
mm10_v2_chr4_-_61835185_61835233	9.75254	Hoxa4	ENSMUST00000082287.2|Mup5|ENSMUSG00000058523.2|major urinary protein 5
mm10_v2_chr7_-_19699008_19699166	7.73797	Hoxa4	ENSMUST00000174355.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000172983.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000174710.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000167646.2|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000003066.9|Apoe|ENSMUSG00000002985.9|apolipoprotein E 	ENSMUST00000174064.1|Apoe|ENSMUSG00000002985.9|apolipoprotein E
mm10_v2_chr9_-_50555170_50555183	6.5134	Hoxa4	ENSMUST00000119103.1|Bco2|ENSMUSG00000032066.9|beta-carotene oxygenase 2
mm10_v2_chr10_+_84756055_84756084	5.48451	Hoxa4	ENSMUST00000060397.6|Rfx4|ENSMUSG00000020037.9|regulatory factor X, 4 (influences HLA class II expression)
mm10_v2_chr15_+_10249560_10249577	5.33834	Hoxa4	ENSMUST00000134410.1|Prlr|ENSMUSG00000005268.14|prolactin receptor
mm10_v2_chr2_+_70474923_70474923	5.15797	Hoxa4	ENSMUST00000100043.2|Sp5|ENSMUSG00000075304.2|trans-acting transcription factor 5
mm10_v2_chr10_+_87859481_87859492	4.94339	Hoxa4	ENSMUST00000121952.1|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr1_-_180193475_180193492	4.93675	Hoxa4	ENSMUST00000160482.1|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3 	ENSMUST00000170472.1|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3
mm10_v2_chr4_+_144893077_144893103	4.75065	Hoxa4	ENSMUST00000154208.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr1_-_180193653_180193666	4.68787	Hoxa4	ENSMUST00000159914.1|Adck3|ENSMUSG00000026489.7|aarF domain containing kinase 3
mm10_v2_chr7_+_51878967_51879000	4.53691	Hoxa4	ENSMUST00000051912.6|Gas2|ENSMUSG00000030498.8|growth arrest specific 2
mm10_v2_chr5_-_87092546_87092563	4.41302	Hoxa4	ENSMUST00000132667.1|Ugt2b36|ENSMUSG00000070704.4|UDP glucuronosyltransferase 2 family, polypeptide B36 	ENSMUST00000145617.1|Ugt2b36|ENSMUSG00000070704.4|UDP glucuronosyltransferase 2 family, polypeptide B36 	ENSMUST00000094649.4|Ugt2b36|ENSMUSG00000070704.4|UDP glucuronosyltransferase 2 family, polypeptide B36
mm10_v2_chr10_+_87859255_87859266	4.34848	Hoxa4	ENSMUST00000105300.2|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr4_+_144892813_144892835	4.33132	Hoxa4	ENSMUST00000105744.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3 	ENSMUST00000171001.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr4_+_144893127_144893151	4.28951	Hoxa4	ENSMUST00000142808.1|Dhrs3|ENSMUSG00000066026.8|dehydrogenase/reductase (SDR family) member 3
mm10_v2_chr7_+_51879041_51879064	4.16796	Hoxa4	ENSMUST00000107591.2|Gas2|ENSMUSG00000030498.8|growth arrest specific 2
mm10_v2_chr5_+_42067960_42067960	4.16555	Hoxa4	ENSMUST00000087332.4|Gm16223|ENSMUSG00000067285.4|predicted gene 16223
mm10_v2_chr11_-_43836243_43836332	4.14966	Hoxa4	ENSMUST00000167574.1|Adra1b|ENSMUSG00000050541.8|adrenergic receptor, alpha 1b
mm10_v2_chr10_+_87859062_87859094	4.13594	Hoxa4	ENSMUST00000095360.4|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr3_+_115080965_115081036	3.9019	Hoxa4	ENSMUST00000051309.8|Olfm3|ENSMUSG00000027965.9|olfactomedin 3
mm10_v2_chr12_-_57546121_57546141	3.37547	Hoxa4	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr18_+_37435602_37435636	3.22549	Hoxa4	ENSMUST00000055495.5|Pcdhb12|ENSMUSG00000043458.5|protocadherin beta 12
mm10_v2_chr4_-_134372529_134372561	3.1872	Hoxa4	ENSMUST00000030643.2|Extl1|ENSMUSG00000028838.5|exostoses (multiple)-like 1
mm10_v2_chr16_+_37580137_37580153	3.09635	Hoxa4	ENSMUST00000160847.1|Hgd|ENSMUSG00000022821.7|homogentisate 1, 2-dioxygenase
mm10_v2_chr6_+_124916863_124916863	2.92414	Hoxa4	ENSMUST00000069553.2|A230083G16Rik|ENSMUSG00000055818.2|RIKEN cDNA A230083G16 gene
mm10_v2_chr13_+_58807884_58807902	2.8059	Hoxa4	ENSMUST00000079828.5|Ntrk2|ENSMUSG00000055254.8|neurotrophic tyrosine kinase, receptor, type 2
mm10_v2_chr2_+_20737306_20737321	2.79897	Hoxa4	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr16_+_22857845_22857914	2.64159	Hoxa4	ENSMUST00000004574.7|Dnajb11|ENSMUSG00000004460.10|DnaJ (Hsp40) homolog, subfamily B, member 11 	ENSMUST00000178320.1|Dnajb11|ENSMUSG00000004460.10|DnaJ (Hsp40) homolog, subfamily B, member 11 	ENSMUST00000166487.2|Dnajb11|ENSMUSG00000004460.10|DnaJ (Hsp40) homolog, subfamily B, member 11
mm10_v2_chr6_+_124304646_124304671	2.59099	Hoxa4	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr2_-_5676046_5676065	2.56033	Hoxa4	ENSMUST00000114987.3|Camk1d|ENSMUSG00000039145.10|calcium/calmodulin-dependent protein kinase ID
mm10_v2_chr1_+_74284930_74285072	2.5532	Hoxa4	ENSMUST00000113805.1|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000027370.6|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia 	ENSMUST00000087226.4|Pnkd|ENSMUSG00000026179.8|paroxysmal nonkinesiogenic dyskinesia
mm10_v2_chrM_+_5319_5333	2.4646	Hoxa4	ENSMUST00000082402.1|mt-Co1|ENSMUSG00000064351.1|mitochondrially encoded cytochrome c oxidase I
mm10_v2_chr2_+_109917639_109917656	2.44909	Hoxa4	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr11_-_116189542_116189575	2.40513	Hoxa4	ENSMUST00000148601.1|Acox1|ENSMUSG00000020777.10|acyl-Coenzyme A oxidase 1, palmitoyl
mm10_v2_chr9_-_65885024_65885069	2.37995	Hoxa4	ENSMUST00000122410.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4 	ENSMUST00000117083.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4
mm10_v2_chr11_+_94327984_94328029	2.33129	Hoxa4	ENSMUST00000107818.2|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40 	ENSMUST00000051221.6|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr12_+_59129757_59129818	2.29828	Hoxa4	ENSMUST00000069430.8|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000177370.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr2_-_77519565_77519647	2.20663	Hoxa4	ENSMUST00000111830.2|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr10_+_53337686_53337724	2.19076	Hoxa4	ENSMUST00000046221.6|Pln|ENSMUSG00000038583.6|phospholamban 	ENSMUST00000163319.1|Pln|ENSMUSG00000038583.6|phospholamban
mm10_v2_chr6_+_43265582_43265681	2.17283	Hoxa4	ENSMUST00000031750.7|Arhgef5|ENSMUSG00000033542.7|Rho guanine nucleotide exchange factor (GEF) 5
mm10_v2_chr10_-_24101951_24101951	2.1654	Hoxa4	ENSMUST00000170267.1|Taar8c|ENSMUSG00000096204.1|trace amine-associated receptor 8C
mm10_v2_chr17_-_34862122_34862238	2.14363	Hoxa4	ENSMUST00000154526.1|Cfb|ENSMUSG00000090231.4|complement factor B
mm10_v2_chr13_+_89540636_89540678	2.14135	Hoxa4	ENSMUST00000022108.7|Hapln1|ENSMUSG00000021613.8|hyaluronan and proteoglycan link protein 1
mm10_v2_chr6_+_63255971_63256036	2.12551	Hoxa4	ENSMUST00000159561.1|Grid2|ENSMUSG00000071424.3|glutamate receptor, ionotropic, delta 2 	ENSMUST00000095852.3|Grid2|ENSMUSG00000071424.3|glutamate receptor, ionotropic, delta 2
mm10_v2_chr11_+_94328242_94328261	2.11135	Hoxa4	ENSMUST00000021227.5|Ankrd40|ENSMUSG00000020864.7|ankyrin repeat domain 40
mm10_v2_chr7_-_34654342_34654398	2.07622	Hoxa4	ENSMUST00000108069.1|Kctd15|ENSMUSG00000030499.3|potassium channel tetramerisation domain containing 15
mm10_v2_chr17_+_45734506_45734630	2.05964	Hoxa4	ENSMUST00000180558.1|F630040K05Rik|ENSMUSG00000097727.1|RIKEN cDNA F630040K05 gene
mm10_v2_chr12_+_59129720_59129755	1.99864	Hoxa4	ENSMUST00000175912.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000176892.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr18_+_58659443_58659522	1.98553	Hoxa4	ENSMUST00000025503.8|Isoc1|ENSMUSG00000024601.8|isochorismatase domain containing 1
mm10_v2_chr19_+_31868754_31868787	1.90033	Hoxa4	ENSMUST00000075838.5|A1cf|ENSMUSG00000052595.6|APOBEC1 complementation factor
mm10_v2_chr6_+_21986887_21986917	1.87959	Hoxa4	ENSMUST00000151315.1|Cped1|ENSMUSG00000062980.9|cadherin-like and PC-esterase domain containing 1
mm10_v2_chr11_-_49114874_49114874	1.85832	Hoxa4	ENSMUST00000109201.1|Olfr1396|ENSMUSG00000047511.2|olfactory receptor 1396
mm10_v2_chr3_+_89459118_89459214	1.845	Hoxa4	ENSMUST00000029564.5|Pmvk|ENSMUSG00000027952.10|phosphomevalonate kinase
mm10_v2_chr10_+_4611971_4612021	1.83778	Hoxa4	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr5_+_139543889_139543904	1.8344	Hoxa4	ENSMUST00000174792.1|Uncx|ENSMUSG00000029546.11|UNC homeobox 	ENSMUST00000031523.8|Uncx|ENSMUSG00000029546.11|UNC homeobox
mm10_v2_chr1_+_165788681_165788728	1.7589	Hoxa4	ENSMUST00000161971.1|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000178336.1|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000005907.5|Cd247|ENSMUSG00000005763.9|CD247 antigen 	ENSMUST00000027849.4|Cd247|ENSMUSG00000005763.9|CD247 antigen
mm10_v2_chr1_+_132298606_132298631	1.72334	Hoxa4	ENSMUST00000046071.4|Klhdc8a|ENSMUSG00000042115.4|kelch domain containing 8A
mm10_v2_chr17_+_24850515_24850591	1.72331	Hoxa4	ENSMUST00000154363.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase 	ENSMUST00000169200.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase
mm10_v2_chr13_-_55362782_55362804	1.70842	Hoxa4	ENSMUST00000021940.7|Lman2|ENSMUSG00000021484.7|lectin, mannose-binding 2
mm10_v2_chr17_+_24850654_24850683	1.68606	Hoxa4	ENSMUST00000130989.1|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase 	ENSMUST00000024974.9|Hagh|ENSMUSG00000024158.11|hydroxyacyl glutathione hydrolase
mm10_v2_chr12_-_56535047_56535106	1.66754	Hoxa4	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr5_+_30814722_30814776	1.65914	Hoxa4	ENSMUST00000114724.1|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
mm10_v2_chr7_+_76411062_76411062	1.64626	Hoxa4	ENSMUST00000026854.3|Agbl1|ENSMUSG00000025754.5|ATP/GTP binding protein-like 1 	ENSMUST00000107442.2|Agbl1|ENSMUSG00000025754.5|ATP/GTP binding protein-like 1
mm10_v2_chr10_-_127121125_127121160	1.6086	Hoxa4	ENSMUST00000164259.1|Os9|ENSMUSG00000040462.6|amplified in osteosarcoma 	ENSMUST00000080975.4|Os9|ENSMUSG00000040462.6|amplified in osteosarcoma
mm10_v2_chr11_-_21572193_21572211	1.59393	Hoxa4	ENSMUST00000102874.4|Mdh1|ENSMUSG00000020321.9|malate dehydrogenase 1, NAD (soluble)
mm10_v2_chr5_-_84417359_84417389	1.58969	Hoxa4	ENSMUST00000113401.1|Epha5|ENSMUSG00000029245.10|Eph receptor A5
mm10_v2_chr19_-_28967794_28967852	1.58194	Hoxa4	ENSMUST00000162110.1|4430402I18Rik|ENSMUSG00000064202.9|RIKEN cDNA 4430402I18 gene
mm10_v2_chr18_+_37447641_37447674	1.57832	Hoxa4	ENSMUST00000052387.3|Pcdhb14|ENSMUSG00000044043.3|protocadherin beta 14
mm10_v2_chr8_-_67974567_67974596	1.57819	Hoxa4	ENSMUST00000098696.3|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000038959.9|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000093469.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr16_-_36990449_36990467	1.57191	Hoxa4	ENSMUST00000075869.6|Fbxo40|ENSMUSG00000047746.8|F-box protein 40
mm10_v2_chr12_+_55598917_55598917	1.56446	Hoxa4	ENSMUST00000051857.3|Insm2|ENSMUSG00000045440.3|insulinoma-associated 2
mm10_v2_chr15_+_32920723_32920826	1.54762	Hoxa4	ENSMUST00000022871.5|Sdc2|ENSMUSG00000022261.5|syndecan 2
mm10_v2_chr6_+_54040078_54040091	1.54083	Hoxa4	ENSMUST00000127323.2|Chn2|ENSMUSG00000004633.11|chimerin (chimaerin) 2
mm10_v2_chr2_+_170731807_170731920	1.53341	Hoxa4	ENSMUST00000029075.4|Dok5|ENSMUSG00000027560.4|docking protein 5
mm10_v2_chr2_-_119547194_119547194	1.51327	Hoxa4	ENSMUST00000133668.1|Exd1|ENSMUSG00000048647.3|exonuclease 3'-5' domain containing 1
mm10_v2_chr7_+_131966446_131966469	1.50264	Hoxa4	ENSMUST00000045840.4|Gpr26|ENSMUSG00000040125.4|G protein-coupled receptor 26
mm10_v2_chr1_+_165788746_165788769	1.48737	Hoxa4	ENSMUST00000161559.2|Cd247|ENSMUSG00000005763.9|CD247 antigen
mm10_v2_chr1_-_138848576_138848603	1.44046	Hoxa4	ENSMUST00000112030.2|Lhx9|ENSMUSG00000019230.8|LIM homeobox protein 9
mm10_v2_chr3_-_32491969_32491969	1.43406	Hoxa4	ENSMUST00000164954.1|Kcnmb3|ENSMUSG00000091091.1|potassium large conductance calcium-activated channel, subfamily M, beta member 3
mm10_v2_chr8_+_22624019_22624043	1.42154	Hoxa4	ENSMUST00000033936.6|Dkk4|ENSMUSG00000031535.6|dickkopf homolog 4 (Xenopus laevis)
mm10_v2_chr10_+_127420334_127420348	1.4168	Hoxa4	ENSMUST00000171434.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr2_+_70563435_70563461	1.38549	Hoxa4	ENSMUST00000123330.1|Gad1|ENSMUSG00000070880.4|glutamate decarboxylase 1
mm10_v2_chr14_-_30353468_30353535	1.3629	Hoxa4	ENSMUST00000112249.1|Cacna1d|ENSMUSG00000015968.10|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm10_v2_chr6_-_138426735_138426816	1.34872	Hoxa4	ENSMUST00000162932.1|Lmo3|ENSMUSG00000030226.6|LIM domain only 3
mm10_v2_chr3_+_86070915_86070915	1.34755	Hoxa4	ENSMUST00000182666.1|Sh3d19|ENSMUSG00000028082.7|SH3 domain protein D19
mm10_v2_chr8_+_47713266_47713266	1.33353	Hoxa4	ENSMUST00000180928.1|E030037K01Rik|ENSMUSG00000097706.1|RIKEN cDNA E030037K01 gene
mm10_v2_chr1_-_67038824_67038872	1.32956	Hoxa4	ENSMUST00000119559.1|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000149996.1|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000027149.5|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000113979.3|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1
mm10_v2_chrM_+_10167_10167	1.3294	Hoxa4	ENSMUST00000082414.1|mt-Nd4|ENSMUSG00000064363.1|mitochondrially encoded NADH dehydrogenase 4
mm10_v2_chr2_+_147187424_147187424	1.32557	Hoxa4	ENSMUST00000144411.1|6430503K07Rik|ENSMUSG00000053545.6|RIKEN cDNA 6430503K07 gene
mm10_v2_chr5_-_146220901_146220987	1.32156	Hoxa4	ENSMUST00000169407.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000161331.1|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000159074.2|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6 	ENSMUST00000067837.3|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6
mm10_v2_chr9_-_29412204_29412277	1.30533	Hoxa4	ENSMUST00000115237.1|Ntm|ENSMUSG00000059974.4|neurotrimin
mm10_v2_chr19_+_8840519_8840549	1.30206	Hoxa4	ENSMUST00000086058.6|Bscl2|ENSMUSG00000071657.6|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm10_v2_chrX_+_7579666_7579693	1.26909	Hoxa4	ENSMUST00000115740.1|Foxp3|ENSMUSG00000039521.6|forkhead box P3 	ENSMUST00000115739.1|Foxp3|ENSMUSG00000039521.6|forkhead box P3
mm10_v2_chr6_+_8949670_8949686	1.26259	Hoxa4	ENSMUST00000060369.3|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr11_-_99337930_99337967	1.24322	Hoxa4	ENSMUST00000100482.2|Krt26|ENSMUSG00000075570.2|keratin 26
mm10_v2_chrX_+_48623737_48623790	1.24207	Hoxa4	ENSMUST00000114936.1|Slc25a14|ENSMUSG00000031105.10|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm10_v2_chr1_-_5070281_5070288	1.22123	Hoxa4	ENSMUST00000147158.1|Rgs20|ENSMUSG00000002459.11|regulator of G-protein signaling 20 	ENSMUST00000118000.1|Rgs20|ENSMUSG00000002459.11|regulator of G-protein signaling 20
mm10_v2_chr14_-_50897456_50897507	1.18962	Hoxa4	ENSMUST00000170855.1|A930018M24Rik|ENSMUSG00000091089.1|RIKEN cDNA A930018M24 gene
mm10_v2_chr5_+_105824511_105824511	1.13907	Hoxa4	ENSMUST00000055994.3|D830014E11Rik|ENSMUSG00000045750.3|RIKEN cDNA D830014E11 gene
mm10_v2_chr3_-_88177671_88177785	1.11986	Hoxa4	ENSMUST00000181837.1|1700113A16Rik|ENSMUSG00000096935.1|RIKEN cDNA 1700113A16 gene
mm10_v2_chr10_+_39612934_39612934	1.11677	Hoxa4	ENSMUST00000019987.6|Traf3ip2|ENSMUSG00000019842.6|TRAF3 interacting protein 2
mm10_v2_chr5_+_115235836_115235836	1.11202	Hoxa4	ENSMUST00000081497.6|Pop5|ENSMUSG00000060152.8|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
mm10_v2_chr12_+_10390756_10390836	1.10881	Hoxa4	ENSMUST00000020947.5|Rdh14|ENSMUSG00000020621.5|retinol dehydrogenase 14 (all-trans and 9-cis)
mm10_v2_chr19_+_24875679_24875689	1.08678	Hoxa4	ENSMUST00000073080.5|Gm10053|ENSMUSG00000058927.5|predicted gene 10053
mm10_v2_chr3_+_5218546_5218561	1.08111	Hoxa4	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr17_+_39846958_39847059	1.0783	Hoxa4	ENSMUST00000182010.1|Gm26924|ENSMUSG00000098178.1|predicted gene, 26924
mm10_v2_chr18_-_61014199_61014261	1.05419	Hoxa4	ENSMUST00000025520.8|Slc6a7|ENSMUSG00000052026.7|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
mm10_v2_chr1_-_190170671_190170744	1.02305	Hoxa4	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr13_+_63015167_63015167	1.02286	Hoxa4	ENSMUST00000021911.8|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chrX_-_106603677_106603702	1.02263	Hoxa4	ENSMUST00000113480.1|Cysltr1|ENSMUSG00000052821.3|cysteinyl leukotriene receptor 1
mm10_v2_chr9_+_77636494_77636528	0.997164	Hoxa4	ENSMUST00000057781.7|Klhl31|ENSMUSG00000044938.8|kelch-like 31
mm10_v2_chr5_-_32133045_32133168	0.995058	Hoxa4	ENSMUST00000031308.6|Gm10463|ENSMUSG00000073058.2|predicted gene 10463
mm10_v2_chr4_+_99295900_99295900	0.994345	Hoxa4	ENSMUST00000094955.1|Gm12689|ENSMUSG00000070891.1|predicted gene 12689
mm10_v2_chr15_-_37458523_37458581	0.991866	Hoxa4	ENSMUST00000116445.2|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr4_-_116053825_116053876	0.978194	Hoxa4	ENSMUST00000030475.1|Nsun4|ENSMUSG00000028706.8|NOL1/NOP2/Sun domain family, member 4
mm10_v2_chr19_-_20954202_20954295	0.974972	Hoxa4	ENSMUST00000039500.3|Tmc1|ENSMUSG00000024749.8|transmembrane channel-like gene family 1
mm10_v2_chr8_+_46986913_46986962	0.968631	Hoxa4	ENSMUST00000039840.7|Enpp6|ENSMUSG00000038173.8|ectonucleotide pyrophosphatase/phosphodiesterase 6 	ENSMUST00000119686.1|Enpp6|ENSMUSG00000038173.8|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm10_v2_chr1_-_93478785_93478823	0.968092	Hoxa4	ENSMUST00000170883.1|Hdlbp|ENSMUSG00000034088.9|high density lipoprotein (HDL) binding protein
mm10_v2_chr8_-_45294854_45294863	0.967003	Hoxa4	ENSMUST00000116473.2|Klkb1|ENSMUSG00000031640.9|kallikrein B, plasma 1
mm10_v2_chr8_-_84937347_84937367	0.964438	Hoxa4	ENSMUST00000109741.2|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1 	ENSMUST00000119820.1|Mast1|ENSMUSG00000053693.10|microtubule associated serine/threonine kinase 1
mm10_v2_chr19_+_11965817_11965887	0.954271	Hoxa4	ENSMUST00000025590.9|Osbp|ENSMUSG00000024687.10|oxysterol binding protein
mm10_v2_chr2_+_83956398_83956398	0.954022	Hoxa4	ENSMUST00000178325.1|Gm13698|ENSMUSG00000094125.1|predicted gene 13698
mm10_v2_chr15_+_55307743_55307762	0.915707	Hoxa4	ENSMUST00000023053.5|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1 	ENSMUST00000110221.2|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1 	ENSMUST00000110217.3|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1
mm10_v2_chr7_-_122101735_122101886	0.907501	Hoxa4	ENSMUST00000139456.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000106471.2|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000123296.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000033157.3|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm10_v2_chr16_-_64786321_64786321	0.904581	Hoxa4	ENSMUST00000052588.4|Zfp654|ENSMUSG00000047141.4|zinc finger protein 654
mm10_v2_chr11_+_67200137_67200148	0.899752	Hoxa4	ENSMUST00000129018.1|Myh1|ENSMUSG00000056328.8|myosin, heavy polypeptide 1, skeletal muscle, adult
mm10_v2_chr9_-_77399308_77399418	0.889973	Hoxa4	ENSMUST00000183878.1|RP23-264N13.2|ENSMUSG00000099170.1|RP23-264N13.2
mm10_v2_chr11_-_99374895_99374909	0.885792	Hoxa4	ENSMUST00000006963.2|Krt28|ENSMUSG00000055937.1|keratin 28
mm10_v2_chr16_-_22857514_22857576	0.882053	Hoxa4	ENSMUST00000004576.6|Tbccd1|ENSMUSG00000004462.6|TBCC domain containing 1
mm10_v2_chr6_+_97210689_97210728	0.87082	Hoxa4	ENSMUST00000044681.6|Arl6ip5|ENSMUSG00000035199.6|ADP-ribosylation factor-like 6 interacting protein 5
mm10_v2_chr13_+_63014934_63014934	0.862367	Hoxa4	ENSMUST00000091560.4|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr13_+_38204928_38204962	0.854169	Hoxa4	ENSMUST00000091641.5|Snrnp48|ENSMUSG00000021431.8|small nuclear ribonucleoprotein 48 (U11/U12) 	ENSMUST00000178564.1|Snrnp48|ENSMUSG00000021431.8|small nuclear ribonucleoprotein 48 (U11/U12)
mm10_v2_chr17_+_24470393_24470481	0.854085	Hoxa4	ENSMUST00000053024.6|Pgp|ENSMUSG00000043445.6|phosphoglycolate phosphatase
mm10_v2_chr10_+_127421124_127421203	0.849533	Hoxa4	ENSMUST00000170336.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr5_-_87699414_87699427	0.848287	Hoxa4	ENSMUST00000082370.5|Csn2|ENSMUSG00000063157.5|casein beta
mm10_v2_chr15_-_99820072_99820154	0.831396	Hoxa4	ENSMUST00000109024.2|Lima1|ENSMUSG00000023022.7|LIM domain and actin binding 1
mm10_v2_chr6_+_21986438_21986596	0.823744	Hoxa4	ENSMUST00000115382.1|Cped1|ENSMUSG00000062980.9|cadherin-like and PC-esterase domain containing 1
mm10_v2_chr6_-_77979515_77979622	0.821199	Hoxa4	ENSMUST00000159626.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2 	ENSMUST00000075340.5|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2 	ENSMUST00000162273.1|Ctnna2|ENSMUSG00000063063.6|catenin (cadherin associated protein), alpha 2
mm10_v2_chr4_+_11579647_11579674	0.813125	Hoxa4	ENSMUST00000180239.1|Fsbp|ENSMUSG00000094595.1|fibrinogen silencer binding protein
mm10_v2_chr3_+_93442330_93442389	0.809957	Hoxa4	ENSMUST00000064257.5|Tchh|ENSMUSG00000052415.5|trichohyalin
mm10_v2_chr18_-_31949571_31949636	0.809859	Hoxa4	ENSMUST00000064016.5|Gpr17|ENSMUSG00000052229.5|G protein-coupled receptor 17
mm10_v2_chr4_+_150237694_150237705	0.809553	Hoxa4	ENSMUST00000141931.1|Eno1|ENSMUSG00000063524.7|enolase 1, alpha non-neuron
mm10_v2_chrX_-_112698642_112698657	0.805969	Hoxa4	ENSMUST00000039887.3|Pof1b|ENSMUSG00000034607.6|premature ovarian failure 1B
mm10_v2_chr8_-_67515606_67515606	0.801689	Hoxa4	ENSMUST00000032981.5|Gm9755|ENSMUSG00000030735.5|predicted pseudogene 9755
mm10_v2_chr16_-_50432340_50432409	0.789983	Hoxa4	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr3_+_5218516_5218544	0.785898	Hoxa4	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr19_-_57197377_57197417	0.783089	Hoxa4	ENSMUST00000111546.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr14_+_46832127_46832151	0.766949	Hoxa4	ENSMUST00000068532.8|Cgrrf1|ENSMUSG00000055128.8|cell growth regulator with ring finger domain 1
mm10_v2_chr5_-_137531204_137531297	0.755138	Hoxa4	ENSMUST00000150063.2|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr3_+_41564880_41564933	0.729706	Hoxa4	ENSMUST00000168086.1|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr15_+_28203726_28203752	0.714409	Hoxa4	ENSMUST00000067048.6|Dnah5|ENSMUSG00000022262.7|dynein, axonemal, heavy chain 5
mm10_v2_chr3_-_80802789_80802840	0.698274	Hoxa4	ENSMUST00000107745.1|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2) 	ENSMUST00000075316.4|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm10_v2_chr18_-_20114767_20114782	0.689174	Hoxa4	ENSMUST00000038710.5|Dsc1|ENSMUSG00000044322.6|desmocollin 1
mm10_v2_chr6_-_73138947_73139005	0.68822	Hoxa4	ENSMUST00000114038.1|Dnah6|ENSMUSG00000052861.7|dynein, axonemal, heavy chain 6
mm10_v2_chr19_-_57197435_57197460	0.684327	Hoxa4	ENSMUST00000111550.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr10_+_24076500_24076500	0.682763	Hoxa4	ENSMUST00000051133.5|Taar8a|ENSMUSG00000096442.1|trace amine-associated receptor 8A
mm10_v2_chr10_+_127420867_127420916	0.659365	Hoxa4	ENSMUST00000064793.6|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr3_+_94837702_94837723	0.643856	Hoxa4	ENSMUST00000107266.1|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain 	ENSMUST00000042402.5|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain 	ENSMUST00000107269.1|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain
mm10_v2_chr18_+_37489465_37489465	0.642175	Hoxa4	ENSMUST00000055949.2|Pcdhb18|ENSMUSG00000048347.4|protocadherin beta 18
mm10_v2_chr7_-_120145286_120145292	0.640203	Hoxa4	ENSMUST00000033207.4|Zp2|ENSMUSG00000030911.6|zona pellucida glycoprotein 2
mm10_v2_chr10_+_18469958_18469981	0.636906	Hoxa4	ENSMUST00000162891.1|Nhsl1|ENSMUSG00000039835.9|NHS-like 1 	ENSMUST00000100054.3|Nhsl1|ENSMUSG00000039835.9|NHS-like 1
mm10_v2_chr11_-_100041547_100041561	0.625102	Hoxa4	ENSMUST00000056362.2|Krt34|ENSMUSG00000043485.2|keratin 34
mm10_v2_chr6_+_29468068_29468113	0.625082	Hoxa4	ENSMUST00000143101.1|Atp6v1f|ENSMUSG00000004285.6|ATPase, H+ transporting, lysosomal V1 subunit F
mm10_v2_chr5_-_137314175_137314241	0.623566	Hoxa4	ENSMUST00000024119.9|Trip6|ENSMUSG00000023348.10|thyroid hormone receptor interactor 6
mm10_v2_chrX_+_150589907_150589996	0.619116	Hoxa4	ENSMUST00000080884.4|Pfkfb1|ENSMUSG00000025271.7|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
mm10_v2_chr1_-_130729249_130729260	0.618591	Hoxa4	ENSMUST00000171479.1|Pfkfb2|ENSMUSG00000026409.8|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm10_v2_chr9_+_75775355_75775378	0.607783	Hoxa4	ENSMUST00000012281.7|Bmp5|ENSMUSG00000032179.7|bone morphogenetic protein 5
mm10_v2_chr2_+_174327747_174327768	0.587763	Hoxa4	ENSMUST00000087871.4|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm10_v2_chr2_-_116065798_116065853	0.584638	Hoxa4	ENSMUST00000110907.1|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000110908.2|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chrX_+_136822671_136822780	0.577335	Hoxa4	ENSMUST00000033800.6|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr7_-_35056467_35056556	0.567243	Hoxa4	ENSMUST00000130491.1|Cebpg|ENSMUSG00000056216.8|CCAAT/enhancer binding protein (C/EBP), gamma
mm10_v2_chr16_-_76373827_76373852	0.564344	Hoxa4	ENSMUST00000121927.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr3_+_94837533_94837567	0.563096	Hoxa4	ENSMUST00000107270.2|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain
mm10_v2_chr12_+_55384222_55384261	0.55475	Hoxa4	ENSMUST00000163070.1|Psma6|ENSMUSG00000021024.8|proteasome (prosome, macropain) subunit, alpha type 6
mm10_v2_chr19_-_38224096_38224183	0.553165	Hoxa4	ENSMUST00000067167.5|Fra10ac1|ENSMUSG00000054237.5|FRA10AC1 homolog (human)
mm10_v2_chr1_-_92518515_92518515	0.545921	Hoxa4	ENSMUST00000062353.4|Olfr1414|ENSMUSG00000042849.4|olfactory receptor 1414
mm10_v2_chr16_+_17331371_17331427	0.538281	Hoxa4	ENSMUST00000023450.6|Serpind1|ENSMUSG00000022766.6|serine (or cysteine) peptidase inhibitor, clade D, member 1 	ENSMUST00000161034.1|Serpind1|ENSMUSG00000022766.6|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm10_v2_chr1_+_180111339_180111339	0.525224	Hoxa4	ENSMUST00000145181.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr9_-_37669170_37669226	0.520927	Hoxa4	ENSMUST00000011262.2|Panx3|ENSMUSG00000011118.3|pannexin 3
mm10_v2_chr18_-_79109391_79109510	0.518369	Hoxa4	ENSMUST00000025430.8|Setbp1|ENSMUSG00000024548.9|SET binding protein 1 	ENSMUST00000161465.2|Setbp1|ENSMUSG00000024548.9|SET binding protein 1
mm10_v2_chr18_+_37355271_37355271	0.515663	Hoxa4	ENSMUST00000051163.1|Pcdhb8|ENSMUSG00000045876.3|protocadherin beta 8
mm10_v2_chr17_-_43667015_43667163	0.515427	Hoxa4	ENSMUST00000024705.4|Slc25a27|ENSMUSG00000023912.9|solute carrier family 25, member 27
mm10_v2_chr15_-_37459327_37459380	0.51079	Hoxa4	ENSMUST00000119730.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta 	ENSMUST00000120746.1|Ncald|ENSMUSG00000051359.8|neurocalcin delta
mm10_v2_chr1_-_110977366_110977382	0.505507	Hoxa4	ENSMUST00000094626.3|Cdh19|ENSMUSG00000047216.7|cadherin 19, type 2
mm10_v2_chr10_+_127421208_127421235	0.498933	Hoxa4	ENSMUST00000168780.1|R3hdm2|ENSMUSG00000025404.9|R3H domain containing 2
mm10_v2_chr1_-_163313661_163313710	0.497935	Hoxa4	ENSMUST00000174397.1|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1 	ENSMUST00000075805.6|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1 	ENSMUST00000027878.7|Prrx1|ENSMUSG00000026586.10|paired related homeobox 1
mm10_v2_chr2_-_93849679_93849836	0.497869	Hoxa4	ENSMUST00000068513.4|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional) 	ENSMUST00000041593.8|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional) 	ENSMUST00000130077.1|Accs|ENSMUSG00000040272.8|1-aminocyclopropane-1-carboxylate synthase (non-functional)
mm10_v2_chr11_-_33203588_33203599	0.496267	Hoxa4	ENSMUST00000037746.6|Tlx3|ENSMUSG00000040610.6|T cell leukemia, homeobox 3
mm10_v2_chr3_-_146781351_146781431	0.494247	Hoxa4	ENSMUST00000005164.7|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr5_-_122614445_122614544	0.493507	Hoxa4	ENSMUST00000127220.1|Ift81|ENSMUSG00000029469.8|intraflagellar transport 81 	ENSMUST00000031426.7|Ift81|ENSMUSG00000029469.8|intraflagellar transport 81
mm10_v2_chrX_-_48513518_48513565	0.491721	Hoxa4	ENSMUST00000114945.2|Aifm1|ENSMUSG00000036932.8|apoptosis-inducing factor, mitochondrion-associated 1 	ENSMUST00000037349.7|Aifm1|ENSMUSG00000036932.8|apoptosis-inducing factor, mitochondrion-associated 1
mm10_v2_chr15_-_82912134_82912190	0.491551	Hoxa4	ENSMUST00000048966.5|Tcf20|ENSMUSG00000041852.8|transcription factor 20 	ENSMUST00000109510.2|Tcf20|ENSMUSG00000041852.8|transcription factor 20
mm10_v2_chr6_+_106118924_106119006	0.485328	Hoxa4	ENSMUST00000079416.5|Cntn4|ENSMUSG00000064293.8|contactin 4
mm10_v2_chr6_+_29467718_29467764	0.47497	Hoxa4	ENSMUST00000004396.6|Atp6v1f|ENSMUSG00000004285.6|ATPase, H+ transporting, lysosomal V1 subunit F
mm10_v2_chr12_-_31713873_31713947	0.470865	Hoxa4	ENSMUST00000057783.4|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000174480.2|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22 	ENSMUST00000176710.1|Gpr22|ENSMUSG00000044067.6|G protein-coupled receptor 22
mm10_v2_chr3_+_5218589_5218614	0.467503	Hoxa4	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr5_-_137530990_137531049	0.451166	Hoxa4	ENSMUST00000132525.1|Gnb2|ENSMUSG00000029713.9|guanine nucleotide binding protein (G protein), beta 2
mm10_v2_chr8_+_106059562_106059623	0.450725	Hoxa4	ENSMUST00000109308.1|Nfatc3|ENSMUSG00000031902.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
mm10_v2_chr6_-_39810881_39810988	0.449687	Hoxa4	ENSMUST00000114797.1|Mrps33|ENSMUSG00000029918.8|mitochondrial ribosomal protein S33 	ENSMUST00000031978.8|Mrps33|ENSMUSG00000029918.8|mitochondrial ribosomal protein S33
mm10_v2_chr1_+_180101144_180101144	0.436305	Hoxa4	ENSMUST00000133890.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chrX_+_66653003_66653031	0.426402	Hoxa4	ENSMUST00000036043.4|Slitrk2|ENSMUSG00000036790.5|SLIT and NTRK-like family, member 2
mm10_v2_chr1_-_165934900_165935036	0.424125	Hoxa4	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr12_+_100110148_100110193	0.423005	Hoxa4	ENSMUST00000021595.8|Psmc1|ENSMUSG00000021178.8|protease (prosome, macropain) 26S subunit, ATPase 1
mm10_v2_chr14_+_44988192_44988203	0.420157	Hoxa4	ENSMUST00000046891.5|Ptger2|ENSMUSG00000037759.5|prostaglandin E receptor 2 (subtype EP2)
mm10_v2_chr19_-_57197556_57197631	0.418529	Hoxa4	ENSMUST00000099294.2|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr1_+_178529113_178529134	0.414161	Hoxa4	ENSMUST00000161017.1|Kif26b|ENSMUSG00000026494.6|kinesin family member 26B
mm10_v2_chr18_+_46925982_46925982	0.403271	Hoxa4	ENSMUST00000097580.1|Arl14epl|ENSMUSG00000073568.1|ADP-ribosylation factor-like 14 effector protein-like
mm10_v2_chr18_+_86711520_86711650	0.401976	Hoxa4	ENSMUST00000122464.1|Cbln2|ENSMUSG00000024647.8|cerebellin 2 precursor protein
mm10_v2_chr10_-_64090241_64090262	0.396969	Hoxa4	ENSMUST00000133588.1|Lrrtm3|ENSMUSG00000042846.8|leucine rich repeat transmembrane neuronal 3
mm10_v2_chr7_-_127260677_127260709	0.394432	Hoxa4	ENSMUST00000035276.4|Dctpp1|ENSMUSG00000042462.4|dCTP pyrophosphatase 1
mm10_v2_chr9_-_55919605_55919605	0.394301	Hoxa4	ENSMUST00000037408.8|Scaper|ENSMUSG00000034007.9|S phase cyclin A-associated protein in the ER
mm10_v2_chr19_-_42752710_42752775	0.387822	Hoxa4	ENSMUST00000076505.3|Pyroxd2|ENSMUSG00000060224.3|pyridine nucleotide-disulphide oxidoreductase domain 2
mm10_v2_chr4_+_86575668_86575689	0.379305	Hoxa4	ENSMUST00000091064.6|Rraga|ENSMUSG00000070934.5|Ras-related GTP binding A
mm10_v2_chr13_-_102905740_102905814	0.37126	Hoxa4	ENSMUST00000167462.1|Mast4|ENSMUSG00000034751.9|microtubule associated serine/threonine kinase family member 4
mm10_v2_chr7_-_103768395_103768395	0.364498	Hoxa4	ENSMUST00000106878.1|Olfr69|ENSMUSG00000058662.2|olfactory receptor 69
mm10_v2_chr9_+_44398176_44398176	0.361265	Hoxa4	ENSMUST00000165839.1|Slc37a4|ENSMUSG00000032114.8|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm10_v2_chr5_-_112896350_112896405	0.359883	Hoxa4	ENSMUST00000086617.4|Myo18b|ENSMUSG00000072720.3|myosin XVIIIb
mm10_v2_chr9_-_48964990_48964990	0.357232	Hoxa4	ENSMUST00000008734.4|Htr3b|ENSMUSG00000008590.4|5-hydroxytryptamine (serotonin) receptor 3B
mm10_v2_chr4_+_130107556_130107606	0.357007	Hoxa4	ENSMUST00000030563.5|Pef1|ENSMUSG00000028779.10|penta-EF hand domain containing 1
mm10_v2_chr6_+_58833689_58833734	0.341178	Hoxa4	ENSMUST00000041401.8|Herc3|ENSMUSG00000029804.10|hect domain and RLD 3
mm10_v2_chr6_-_124813065_124813092	0.339672	Hoxa4	ENSMUST00000149610.2|Tpi1|ENSMUSG00000023456.8|triosephosphate isomerase 1
mm10_v2_chr6_+_56832059_56832160	0.337835	Hoxa4	ENSMUST00000031795.7|Fkbp9|ENSMUSG00000029781.7|FK506 binding protein 9
mm10_v2_chr11_-_30268169_30268191	0.33517	Hoxa4	ENSMUST00000006629.7|Sptbn1|ENSMUSG00000020315.12|spectrin beta, non-erythrocytic 1
mm10_v2_chr17_+_34238914_34238964	0.335046	Hoxa4	ENSMUST00000167280.1|H2-Ob|ENSMUSG00000041538.9|histocompatibility 2, O region beta locus
mm10_v2_chr6_-_52191695_52191753	0.331593	Hoxa4	ENSMUST00000101395.2|Hoxa4|ENSMUSG00000000942.10|homeobox A4
mm10_v2_chr17_-_29078953_29078972	0.330204	Hoxa4	ENSMUST00000133221.1|Trp53cor1|ENSMUSG00000085912.1|tumor protein p53 pathway corepressor 1
mm10_v2_chr1_-_86110672_86110761	0.319926	Hoxa4	ENSMUST00000155077.1|Htr2b|ENSMUSG00000026228.6|5-hydroxytryptamine (serotonin) receptor 2B
mm10_v2_chr10_+_127501672_127501706	0.317879	Hoxa4	ENSMUST00000160019.1|Stac3|ENSMUSG00000040287.3|SH3 and cysteine rich domain 3 	ENSMUST00000160610.1|Stac3|ENSMUSG00000040287.3|SH3 and cysteine rich domain 3
mm10_v2_chr12_+_52516077_52516077	0.297929	Hoxa4	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr5_-_100373484_100373527	0.290961	Hoxa4	ENSMUST00000182433.1|Sec31a|ENSMUSG00000035325.10|Sec31 homolog A (S. cerevisiae)
mm10_v2_chr10_-_64090265_64090297	0.287321	Hoxa4	ENSMUST00000105439.1|Lrrtm3|ENSMUSG00000042846.8|leucine rich repeat transmembrane neuronal 3
mm10_v2_chr9_+_75051977_75052082	0.282359	Hoxa4	ENSMUST00000170310.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19 	ENSMUST00000166549.1|Arpp19|ENSMUSG00000007656.7|cAMP-regulated phosphoprotein 19
mm10_v2_chr3_-_64507685_64507685	0.270085	Hoxa4	ENSMUST00000170270.1|Vmn2r5|ENSMUSG00000068999.6|vomeronasal 2, receptor 5
mm10_v2_chr2_+_85991819_85991819	0.267252	Hoxa4	ENSMUST00000050942.2|Olfr1031|ENSMUSG00000043267.2|olfactory receptor 1031
mm10_v2_chrX_+_136822781_136822840	0.261078	Hoxa4	ENSMUST00000113085.1|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr2_-_57113053_57113072	0.258359	Hoxa4	ENSMUST00000112627.1|Nr4a2|ENSMUSG00000026826.7|nuclear receptor subfamily 4, group A, member 2
mm10_v2_chr4_+_114821722_114821722	0.246437	Hoxa4	ENSMUST00000137570.1|Gm12830|ENSMUSG00000055198.3|predicted gene 12830
mm10_v2_chr17_-_26886175_26886248	0.244083	Hoxa4	ENSMUST00000108741.2|Gm17382|ENSMUSG00000078838.2|predicted gene, 17382
mm10_v2_chr17_+_43667389_43667425	0.241243	Hoxa4	ENSMUST00000170988.1|Cyp39a1|ENSMUSG00000023963.9|cytochrome P450, family 39, subfamily a, polypeptide 1
mm10_v2_chr5_+_64812336_64812350	0.230601	Hoxa4	ENSMUST00000166409.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr17_+_75465538_75465568	0.223041	Hoxa4	ENSMUST00000095204.4|Rasgrp3|ENSMUSG00000071042.5|RAS, guanyl releasing protein 3
mm10_v2_chr1_+_53061637_53061663	0.222274	Hoxa4	ENSMUST00000027269.5|Mstn|ENSMUSG00000026100.5|myostatin
mm10_v2_chr5_-_86745787_86745815	0.220961	Hoxa4	ENSMUST00000161306.1|Tmprss11e|ENSMUSG00000054537.8|transmembrane protease, serine 11e
mm10_v2_chr1_+_109983737_109983737	0.220292	Hoxa4	ENSMUST00000172005.1|Cdh7|ENSMUSG00000026312.11|cadherin 7, type 2
mm10_v2_chr18_+_37819543_37819570	0.215898	Hoxa4	ENSMUST00000055935.5|Pcdhga9|ENSMUSG00000023036.8|protocadherin gamma subfamily A, 9
mm10_v2_chr2_+_93452796_93452833	0.210198	Hoxa4	ENSMUST00000099693.2|Gm10804|ENSMUSG00000075025.4|predicted gene 10804 	ENSMUST00000162565.1|Gm10804|ENSMUSG00000075025.4|predicted gene 10804 	ENSMUST00000163052.1|Gm10804|ENSMUSG00000075025.4|predicted gene 10804
mm10_v2_chr2_+_83644435_83644490	0.209159	Hoxa4	ENSMUST00000081591.6|Zc3h15|ENSMUSG00000027091.8|zinc finger CCCH-type containing 15
mm10_v2_chr10_+_34389974_34389990	0.203381	Hoxa4	ENSMUST00000105511.1|Col10a1|ENSMUSG00000039462.4|collagen, type X, alpha 1
mm10_v2_chr3_+_88965812_88965812	0.201734	Hoxa4	ENSMUST00000090933.4|Ash1l|ENSMUSG00000028053.7|ash1 (absent, small, or homeotic)-like (Drosophila)
mm10_v2_chr10_+_102158858_102158889	0.195884	Hoxa4	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr19_-_57197496_57197536	0.192373	Hoxa4	ENSMUST00000111544.1|Ablim1|ENSMUSG00000025085.10|actin-binding LIM protein 1
mm10_v2_chr2_+_37065746_37065746	0.181167	Hoxa4	ENSMUST00000120505.1|Olfr360|ENSMUSG00000083361.2|olfactory receptor 360
mm10_v2_chr10_+_63457505_63457539	0.175078	Hoxa4	ENSMUST00000105440.1|Ctnna3|ENSMUSG00000060843.5|catenin (cadherin associated protein), alpha 3
mm10_v2_chr18_-_65970178_65970201	0.170272	Hoxa4	ENSMUST00000025397.5|Cplx4|ENSMUSG00000024519.5|complexin 4
mm10_v2_chr11_-_30986326_30986372	0.168009	Hoxa4	ENSMUST00000020553.4|Chac2|ENSMUSG00000020309.6|ChaC, cation transport regulator 2 	ENSMUST00000101394.4|Chac2|ENSMUSG00000020309.6|ChaC, cation transport regulator 2
mm10_v2_chr12_-_27160311_27160476	0.163682	Hoxa4	ENSMUST00000182473.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000177636.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866 	ENSMUST00000183238.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866
mm10_v2_chr3_-_146682410_146682522	0.152861	Hoxa4	ENSMUST00000124931.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13 	ENSMUST00000147113.1|Samd13|ENSMUSG00000048652.6|sterile alpha motif domain containing 13
mm10_v2_chr2_-_116065047_116065133	0.151126	Hoxa4	ENSMUST00000028639.6|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000102538.4|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr14_-_46390576_46390669	0.150297	Hoxa4	ENSMUST00000074077.5|Bmp4|ENSMUSG00000021835.8|bone morphogenetic protein 4
mm10_v2_chr14_-_70642268_70642268	0.149502	Hoxa4	ENSMUST00000022697.5|Fgf17|ENSMUSG00000022101.5|fibroblast growth factor 17
mm10_v2_chr7_+_135268579_135268619	0.139845	Hoxa4	ENSMUST00000097983.3|Nps|ENSMUSG00000073804.3|neuropeptide S
mm10_v2_chr6_-_92534855_92534890	0.139725	Hoxa4	ENSMUST00000113446.1|Prickle2|ENSMUSG00000030020.7|prickle homolog 2 (Drosophila)
mm10_v2_chr12_+_56695628_56695700	0.130096	Hoxa4	ENSMUST00000001538.9|Pax9|ENSMUSG00000001497.12|paired box gene 9
mm10_v2_chr10_+_127501707_127501726	0.12924	Hoxa4	ENSMUST00000035839.2|Stac3|ENSMUSG00000040287.3|SH3 and cysteine rich domain 3
mm10_v2_chr4_-_118180043_118180054	0.12586	Hoxa4	ENSMUST00000106406.2|Kdm4a|ENSMUSG00000033326.9|lysine (K)-specific demethylase 4A
mm10_v2_chr6_+_77242715_77242729	0.124116	Hoxa4	ENSMUST00000161677.1|Lrrtm1|ENSMUSG00000060780.2|leucine rich repeat transmembrane neuronal 1
mm10_v2_chr2_+_65930117_65930190	0.123574	Hoxa4	ENSMUST00000176109.1|Csrnp3|ENSMUSG00000044647.10|cysteine-serine-rich nuclear protein 3
mm10_v2_chr6_-_145434079_145434090	0.115455	Hoxa4	ENSMUST00000149666.1|Ifltd1|ENSMUSG00000054966.7|intermediate filament tail domain containing 1
mm10_v2_chr2_-_112259281_112259312	0.113108	Hoxa4	ENSMUST00000043970.1|Nutm1|ENSMUSG00000041358.1|NUT midline carcinoma, family member 1
mm10_v2_chr15_-_103448455_103448464	0.0982516	Hoxa4	ENSMUST00000065978.7|BC048502|ENSMUSG00000053508.7|cDNA sequence BC048502
mm10_v2_chr15_+_62037986_62038061	0.0976014	Hoxa4	ENSMUST00000182956.1|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000182075.1|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000180432.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000181416.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1 	ENSMUST00000181657.2|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1
mm10_v2_chr12_+_29528382_29528468	0.0943132	Hoxa4	ENSMUST00000049784.9|Myt1l|ENSMUSG00000061911.8|myelin transcription factor 1-like
mm10_v2_chr13_+_94875600_94875611	0.0915778	Hoxa4	ENSMUST00000022195.10|Otp|ENSMUSG00000021685.10|orthopedia homolog (Drosophila)
mm10_v2_chr12_-_27160498_27160633	0.0885853	Hoxa4	ENSMUST00000182592.1|Gm9866|ENSMUSG00000094002.2|predicted gene 9866
mm10_v2_chr6_-_23650206_23650271	0.0870257	Hoxa4	ENSMUST00000115354.1|Rnf133|ENSMUSG00000051956.4|ring finger protein 133
mm10_v2_chr10_+_102159000_102159079	0.0785637	Hoxa4	ENSMUST00000020039.6|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr9_-_110624361_110624439	0.0770696	Hoxa4	ENSMUST00000035069.9|Nradd|ENSMUSG00000032491.10|neurotrophin receptor associated death domain
mm10_v2_chr13_-_107890059_107890073	0.0713832	Hoxa4	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr11_+_57011945_57011956	0.0706182	Hoxa4	ENSMUST00000094179.4|Gria1|ENSMUSG00000020524.10|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm10_v2_chr16_+_10812915_10812915	0.0703521	Hoxa4	ENSMUST00000115822.1|Gm11172|ENSMUSG00000079740.1|predicted gene 11172
mm10_v2_chr11_+_96302595_96302595	0.0684574	Hoxa4	ENSMUST00000049272.3|Hoxb5|ENSMUSG00000038700.3|homeobox B5
mm10_v2_chr13_+_42680565_42680623	0.0671788	Hoxa4	ENSMUST00000128646.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr7_-_109731708_109731732	0.0650776	Hoxa4	ENSMUST00000035372.1|Ascl3|ENSMUSG00000035951.1|achaete-scute complex homolog 3 (Drosophila)
mm10_v2_chr12_+_84361636_84361657	0.0634813	Hoxa4	ENSMUST00000110276.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr12_-_11208948_11208948	0.0560165	Hoxa4	ENSMUST00000049877.1|Msgn1|ENSMUSG00000047002.1|mesogenin 1
mm10_v2_chr3_+_96645579_96645608	0.0526934	Hoxa4	ENSMUST00000119365.1|Itga10|ENSMUSG00000090210.1|integrin, alpha 10 	ENSMUST00000029744.5|Itga10|ENSMUSG00000090210.1|integrin, alpha 10
mm10_v2_chr6_+_77242644_77242697	0.0515102	Hoxa4	ENSMUST00000159616.1|Lrrtm1|ENSMUSG00000060780.2|leucine rich repeat transmembrane neuronal 1
mm10_v2_chr13_-_3918157_3918220	0.0463157	Hoxa4	ENSMUST00000091853.4|Net1|ENSMUSG00000021215.8|neuroepithelial cell transforming gene 1
mm10_v2_chr1_-_158356258_158356313	0.0440176	Hoxa4	ENSMUST00000004133.8|Brinp2|ENSMUSG00000004031.8|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm10_v2_chr2_+_71528657_71528683	0.0435672	Hoxa4	ENSMUST00000126400.1|Dlx1|ENSMUSG00000041911.3|distal-less homeobox 1
mm10_v2_chr11_+_67171027_67171071	0.0358321	Hoxa4	ENSMUST00000170159.1|Myh2|ENSMUSG00000033196.11|myosin, heavy polypeptide 2, skeletal muscle, adult
mm10_v2_chr11_+_67171095_67171220	0.0319292	Hoxa4	ENSMUST00000018641.7|Myh2|ENSMUSG00000033196.11|myosin, heavy polypeptide 2, skeletal muscle, adult
mm10_v2_chr7_+_64185459_64185601	0.0275748	Hoxa4	ENSMUST00000177102.2|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000107519.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000137650.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000032737.5|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000107515.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1 	ENSMUST00000144996.1|Trpm1|ENSMUSG00000030523.12|transient receptor potential cation channel, subfamily M, member 1
mm10_v2_chr7_+_79273201_79273270	0.0251557	Hoxa4	ENSMUST00000037315.6|Abhd2|ENSMUSG00000039202.6|abhydrolase domain containing 2
mm10_v2_chr13_+_111255010_111255018	0.0247063	Hoxa4	ENSMUST00000054716.3|Actbl2|ENSMUSG00000055194.3|actin, beta-like 2
mm10_v2_chr12_-_84361802_84361838	0.0184227	Hoxa4	ENSMUST00000021659.1|Fam161b|ENSMUSG00000021234.3|family with sequence similarity 161, member B 	ENSMUST00000065536.2|Fam161b|ENSMUSG00000021234.3|family with sequence similarity 161, member B
mm10_v2_chr12_+_84362029_84362064	0.0173281	Hoxa4	ENSMUST00000110278.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast) 	ENSMUST00000145522.1|Coq6|ENSMUSG00000021235.7|coenzyme Q6 homolog (yeast)
mm10_v2_chr10_+_69534208_69534222	0.0130592	Hoxa4	ENSMUST00000182439.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092434.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092432.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000092431.5|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000054167.8|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000047061.6|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
