mm10_v2_chr3_+_40745430_40745459	0.649523	GUAACAG	ENSMUST00000077083.6|Hspa4l|ENSMUSG00000025757.7|heat shock protein 4 like
mm10_v2_chr16_-_15594507_15594531	0.596783	GUAACAG	ENSMUST00000115776.1|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2 	ENSMUST00000115777.3|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2
mm10_v2_chrX_-_38564519_38564555	0.561126	GUAACAG	ENSMUST00000016681.8|Cul4b|ENSMUSG00000031095.9|cullin 4B
mm10_v2_chr12_+_59131286_59131469	0.550522	GUAACAG	ENSMUST00000176464.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000170992.2|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5 	ENSMUST00000176322.1|Ctage5|ENSMUSG00000021000.9|CTAGE family, member 5
mm10_v2_chr2_+_49451486_49451559	0.54217	GUAACAG	ENSMUST00000092123.4|Epc2|ENSMUSG00000069495.6|enhancer of polycomb homolog 2 (Drosophila)
mm10_v2_chr5_-_51553896_51553921	0.533609	GUAACAG	ENSMUST00000132734.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm10_v2_chr16_-_76373827_76373852	0.506303	GUAACAG	ENSMUST00000121927.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr8_-_69373383_69373383	0.504966	GUAACAG	ENSMUST00000072427.4|Gm10033|ENSMUSG00000057924.4|predicted gene 10033
mm10_v2_chr5_-_63968867_63968905	0.467977	GUAACAG	ENSMUST00000154169.1|Rell1|ENSMUSG00000047881.8|RELT-like 1
mm10_v2_chr5_+_124439891_124439991	0.465716	GUAACAG	ENSMUST00000059580.4|Setd8|ENSMUSG00000049327.11|SET domain containing (lysine methyltransferase) 8
mm10_v2_chr10_+_7681197_7681225	0.408902	GUAACAG	ENSMUST00000165952.1|Lats1|ENSMUSG00000040021.6|large tumor suppressor
mm10_v2_chr19_-_23448322_23448350	0.40435	GUAACAG	ENSMUST00000036069.6|Mamdc2|ENSMUSG00000033207.6|MAM domain containing 2
mm10_v2_chr13_+_96542727_96542775	0.389644	GUAACAG	ENSMUST00000077672.4|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 	ENSMUST00000109444.2|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm10_v2_chr5_+_63649335_63649451	0.388461	GUAACAG	ENSMUST00000159584.1|3110047P20Rik|ENSMUSG00000090061.3|RIKEN cDNA 3110047P20 gene
mm10_v2_chr8_+_107293463_107293483	0.386809	GUAACAG	ENSMUST00000169453.1|Nfat5|ENSMUSG00000003847.10|nuclear factor of activated T cells 5
mm10_v2_chr13_+_104178797_104178872	0.375212	GUAACAG	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chr5_+_3803160_3803193	0.371223	GUAACAG	ENSMUST00000171023.1|Krit1|ENSMUSG00000000600.9|KRIT1, ankyrin repeat containing 	ENSMUST00000080085.4|Krit1|ENSMUSG00000000600.9|KRIT1, ankyrin repeat containing
mm10_v2_chr18_+_35562158_35562174	0.361207	GUAACAG	ENSMUST00000166793.1|Matr3|ENSMUSG00000037236.8|matrin 3
mm10_v2_chr16_+_44139821_44139900	0.360048	GUAACAG	ENSMUST00000159514.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000161326.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063520.8|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063542.7|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm10_v2_chr6_+_145211134_145211222	0.355095	GUAACAG	ENSMUST00000111725.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111726.3|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000039729.3|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111723.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111724.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111721.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5 	ENSMUST00000111719.1|Lyrm5|ENSMUSG00000040370.7|LYR motif containing 5
mm10_v2_chr5_+_124540695_124540786	0.354811	GUAACAG	ENSMUST00000060226.4|Tmed2|ENSMUSG00000029390.7|transmembrane emp24 domain trafficking protein 2
mm10_v2_chr9_-_13827029_13827129	0.351529	GUAACAG	ENSMUST00000148086.1|Cep57|ENSMUSG00000031922.6|centrosomal protein 57 	ENSMUST00000034398.5|Cep57|ENSMUSG00000031922.6|centrosomal protein 57
mm10_v2_chrX_+_166238901_166238914	0.344622	GUAACAG	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr2_-_75704535_75704641	0.343823	GUAACAG	ENSMUST00000102672.4|Nfe2l2|ENSMUSG00000015839.6|nuclear factor, erythroid derived 2, like 2
mm10_v2_chr7_+_59228743_59228769	0.342883	GUAACAG	ENSMUST00000107537.1|Ube3a|ENSMUSG00000025326.8|ubiquitin protein ligase E3A
mm10_v2_chr5_+_23434435_23434471	0.339134	GUAACAG	ENSMUST00000094962.2|Kmt2e|ENSMUSG00000029004.9|lysine (K)-specific methyltransferase 2E 	ENSMUST00000115128.1|Kmt2e|ENSMUSG00000029004.9|lysine (K)-specific methyltransferase 2E
mm10_v2_chr19_+_53600377_53600435	0.336672	GUAACAG	ENSMUST00000025930.9|Smc3|ENSMUSG00000024974.10|structural maintenance of chromosomes 3
mm10_v2_chr1_+_180726019_180726106	0.335623	GUAACAG	ENSMUST00000027780.4|Acbd3|ENSMUSG00000026499.4|acyl-Coenzyme A binding domain containing 3
mm10_v2_chr2_+_96318014_96318216	0.332807	GUAACAG	ENSMUST00000135431.1|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C 	ENSMUST00000162807.2|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C
mm10_v2_chr10_+_39732099_39732140	0.326827	GUAACAG	ENSMUST00000019986.6|Rev3l|ENSMUSG00000019841.9|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm10_v2_chr14_-_49066653_49066674	0.321302	GUAACAG	ENSMUST00000162175.1|Exoc5|ENSMUSG00000061244.7|exocyst complex component 5
mm10_v2_chr1_-_64737735_64737756	0.319199	GUAACAG	ENSMUST00000063982.5|Fzd5|ENSMUSG00000045005.8|frizzled homolog 5 (Drosophila) 	ENSMUST00000116133.2|Fzd5|ENSMUSG00000045005.8|frizzled homolog 5 (Drosophila)
mm10_v2_chr9_-_70657121_70657188	0.315355	GUAACAG	ENSMUST00000049031.5|Fam63b|ENSMUSG00000042444.9|family with sequence similarity 63, member B
mm10_v2_chr6_-_13677930_13677974	0.313202	GUAACAG	ENSMUST00000045235.5|B630005N14Rik|ENSMUSG00000042742.5|RIKEN cDNA B630005N14 gene
mm10_v2_chr8_-_26119125_26119233	0.31107	GUAACAG	ENSMUST00000037182.7|Hook3|ENSMUSG00000037234.10|hook homolog 3 (Drosophila)
mm10_v2_chr9_-_101251810_101251839	0.310789	GUAACAG	ENSMUST00000075941.5|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr6_+_146888481_146888589	0.308521	GUAACAG	ENSMUST00000016631.7|Ppfibp1|ENSMUSG00000016487.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENSMUST00000111623.2|Ppfibp1|ENSMUSG00000016487.9|PTPRF interacting protein, binding protein 1 (liprin beta 1)
mm10_v2_chr18_-_16809233_16809324	0.305623	GUAACAG	ENSMUST00000025166.7|Cdh2|ENSMUSG00000024304.8|cadherin 2
mm10_v2_chr9_+_70542872_70542920	0.30033	GUAACAG	ENSMUST00000049263.7|Sltm|ENSMUSG00000032212.9|SAFB-like, transcription modulator
mm10_v2_chr1_-_86359455_86359486	0.295301	GUAACAG	ENSMUST00000027438.6|Ncl|ENSMUSG00000026234.6|nucleolin
mm10_v2_chr2_+_30061754_30061859	0.29344	GUAACAG	ENSMUST00000149578.1|Set|ENSMUSG00000054766.7|SET nuclear oncogene 	ENSMUST00000102866.3|Set|ENSMUSG00000054766.7|SET nuclear oncogene
mm10_v2_chr10_-_122097371_122097371	0.291107	GUAACAG	ENSMUST00000140299.1|Tmem5|ENSMUSG00000034620.11|transmembrane protein 5
mm10_v2_chr10_+_111164794_111164811	0.289305	GUAACAG	ENSMUST00000105275.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8 	ENSMUST00000095310.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8
mm10_v2_chr19_+_47579602_47579681	0.284704	GUAACAG	ENSMUST00000026043.5|Slk|ENSMUSG00000025060.8|STE20-like kinase
mm10_v2_chr14_+_34673888_34673930	0.281327	GUAACAG	ENSMUST00000048263.7|Wapal|ENSMUSG00000041408.10|wings apart-like homolog (Drosophila)
mm10_v2_chr1_+_91053422_91053520	0.272201	GUAACAG	ENSMUST00000097650.3|Lrrfip1|ENSMUSG00000026305.9|leucine rich repeat (in FLII) interacting protein 1 	ENSMUST00000068167.6|Lrrfip1|ENSMUSG00000026305.9|leucine rich repeat (in FLII) interacting protein 1 	ENSMUST00000097649.3|Lrrfip1|ENSMUSG00000026305.9|leucine rich repeat (in FLII) interacting protein 1
mm10_v2_chr8_+_128359065_128359085	0.268655	GUAACAG	ENSMUST00000026917.8|Nrp1|ENSMUSG00000025810.8|neuropilin 1
mm10_v2_chr2_-_20968881_20968957	0.268645	GUAACAG	ENSMUST00000114594.1|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr2_-_161109017_161109027	0.265837	GUAACAG	ENSMUST00000039782.7|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6 	ENSMUST00000134178.1|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6
mm10_v2_chr1_+_185454803_185454848	0.256266	GUAACAG	ENSMUST00000061093.6|Slc30a10|ENSMUSG00000026614.6|solute carrier family 30, member 10
mm10_v2_chr12_+_4917376_4917438	0.248546	GUAACAG	ENSMUST00000045664.5|Atad2b|ENSMUSG00000052812.4|ATPase family, AAA domain containing 2B
mm10_v2_chr12_+_71831064_71831178	0.237939	GUAACAG	ENSMUST00000085299.2|Daam1|ENSMUSG00000034574.9|dishevelled associated activator of morphogenesis 1
mm10_v2_chr2_+_69897220_69897247	0.236335	GUAACAG	ENSMUST00000055758.9|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3 	ENSMUST00000112251.2|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr13_+_84222286_84222356	0.233857	GUAACAG	ENSMUST00000057495.8|Tmem161b|ENSMUSG00000035762.10|transmembrane protein 161B
mm10_v2_chr18_+_64340225_64340364	0.232726	GUAACAG	ENSMUST00000175965.2|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2 	ENSMUST00000115145.3|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2
mm10_v2_chr4_-_108780782_108780803	0.232634	GUAACAG	ENSMUST00000106657.1|Zfyve9|ENSMUSG00000034557.8|zinc finger, FYVE domain containing 9
mm10_v2_chr10_+_20312461_20312492	0.231446	GUAACAG	ENSMUST00000092678.3|Bclaf1|ENSMUSG00000037608.9|BCL2-associated transcription factor 1 	ENSMUST00000043881.5|Bclaf1|ENSMUSG00000037608.9|BCL2-associated transcription factor 1
mm10_v2_chr2_+_52072823_52072854	0.230771	GUAACAG	ENSMUST00000112693.2|Rif1|ENSMUSG00000036202.9|Rap1 interacting factor 1 homolog (yeast) 	ENSMUST00000069794.5|Rif1|ENSMUSG00000036202.9|Rap1 interacting factor 1 homolog (yeast)
mm10_v2_chr1_+_191906743_191906767	0.229241	GUAACAG	ENSMUST00000044954.6|Slc30a1|ENSMUSG00000037434.7|solute carrier family 30 (zinc transporter), member 1
mm10_v2_chr17_-_10319324_10319380	0.228967	GUAACAG	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr14_-_20794009_20794098	0.222606	GUAACAG	ENSMUST00000100837.3|Camk2g|ENSMUSG00000021820.10|calcium/calmodulin-dependent protein kinase II gamma 	ENSMUST00000080440.6|Camk2g|ENSMUSG00000021820.10|calcium/calmodulin-dependent protein kinase II gamma 	ENSMUST00000071816.6|Camk2g|ENSMUSG00000021820.10|calcium/calmodulin-dependent protein kinase II gamma
mm10_v2_chr7_+_97579868_97579901	0.219307	GUAACAG	ENSMUST00000042399.7|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1 	ENSMUST00000107153.1|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1
mm10_v2_chr12_-_57546121_57546141	0.217797	GUAACAG	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr19_-_59943647_59943678	0.217552	GUAACAG	ENSMUST00000171986.1|Rab11fip2|ENSMUSG00000040022.8|RAB11 family interacting protein 2 (class I)
mm10_v2_chr6_+_120364094_120364163	0.214467	GUAACAG	ENSMUST00000100996.3|Kdm5a|ENSMUSG00000030180.9|lysine (K)-specific demethylase 5A 	ENSMUST00000005108.7|Kdm5a|ENSMUSG00000030180.9|lysine (K)-specific demethylase 5A
mm10_v2_chr8_+_90828820_90828842	0.204281	GUAACAG	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr4_+_53440516_53440684	0.202388	GUAACAG	ENSMUST00000107651.2|Slc44a1|ENSMUSG00000028412.11|solute carrier family 44, member 1 	ENSMUST00000107647.1|Slc44a1|ENSMUSG00000028412.11|solute carrier family 44, member 1
mm10_v2_chr14_+_123659971_123660209	0.201936	GUAACAG	ENSMUST00000049681.7|Itgbl1|ENSMUSG00000032925.10|integrin, beta-like 1
mm10_v2_chr5_-_25498702_25498745	0.200231	GUAACAG	ENSMUST00000173073.1|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C 	ENSMUST00000045291.7|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C
mm10_v2_chr6_+_8259379_8259460	0.19884	GUAACAG	ENSMUST00000162034.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039 	ENSMUST00000160705.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039 	ENSMUST00000159433.1|Gm16039|ENSMUSG00000089862.2|predicted gene 16039
mm10_v2_chr2_-_116065798_116065853	0.197829	GUAACAG	ENSMUST00000110907.1|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000110908.2|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr1_+_184034381_184034437	0.191064	GUAACAG	ENSMUST00000048655.7|Dusp10|ENSMUSG00000039384.8|dual specificity phosphatase 10
mm10_v2_chr14_+_12284198_12284239	0.184625	GUAACAG	ENSMUST00000112669.3|3830406C13Rik|ENSMUSG00000033111.9|RIKEN cDNA 3830406C13 gene 	ENSMUST00000163392.1|3830406C13Rik|ENSMUSG00000033111.9|RIKEN cDNA 3830406C13 gene
mm10_v2_chr6_-_148212374_148212391	0.181438	GUAACAG	ENSMUST00000136008.1|Ergic2|ENSMUSG00000030304.5|ERGIC and golgi 2 	ENSMUST00000032447.4|Ergic2|ENSMUSG00000030304.5|ERGIC and golgi 2
mm10_v2_chr11_+_77216180_77216287	0.17991	GUAACAG	ENSMUST00000037912.5|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila) 	ENSMUST00000156488.1|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila)
mm10_v2_chr8_-_35495487_35495545	0.178959	GUAACAG	ENSMUST00000033927.6|Eri1|ENSMUSG00000031527.6|exoribonuclease 1
mm10_v2_chr4_-_122961173_122961193	0.176395	GUAACAG	ENSMUST00000030408.5|Mfsd2a|ENSMUSG00000028655.5|major facilitator superfamily domain containing 2A 	ENSMUST00000127047.1|Mfsd2a|ENSMUSG00000028655.5|major facilitator superfamily domain containing 2A
mm10_v2_chr16_-_32079270_32079368	0.176388	GUAACAG	ENSMUST00000023467.8|Pak2|ENSMUSG00000022781.8|p21 protein (Cdc42/Rac)-activated kinase 2
mm10_v2_chr1_+_78657825_78657868	0.176265	GUAACAG	ENSMUST00000035779.8|Acsl3|ENSMUSG00000032883.9|acyl-CoA synthetase long-chain family member 3
mm10_v2_chr2_-_164443177_164443194	0.175872	GUAACAG	ENSMUST00000017153.3|Sdc4|ENSMUSG00000017009.3|syndecan 4
mm10_v2_chr15_-_96460838_96460856	0.174725	GUAACAG	ENSMUST00000047835.6|Scaf11|ENSMUSG00000033228.7|SR-related CTD-associated factor 11
mm10_v2_chr12_+_71015966_71016063	0.169789	GUAACAG	ENSMUST00000046305.5|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr1_+_131910458_131910539	0.169034	GUAACAG	ENSMUST00000062264.6|Nucks1|ENSMUSG00000026434.6|nuclear casein kinase and cyclin-dependent kinase substrate 1
mm10_v2_chr2_+_74825802_74825858	0.167511	GUAACAG	ENSMUST00000028511.7|Mtx2|ENSMUSG00000027099.9|metaxin 2
mm10_v2_chr12_+_52516077_52516077	0.167159	GUAACAG	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr3_+_34020075_34020082	0.165181	GUAACAG	ENSMUST00000001620.8|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog 	ENSMUST00000167354.1|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog
mm10_v2_chr17_+_74528279_74528295	0.164472	GUAACAG	ENSMUST00000180037.1|Birc6|ENSMUSG00000024073.8|baculoviral IAP repeat-containing 6 	ENSMUST00000024879.6|Birc6|ENSMUSG00000024073.8|baculoviral IAP repeat-containing 6
mm10_v2_chr5_-_21055880_21055961	0.162287	GUAACAG	ENSMUST00000030556.7|Ptpn12|ENSMUSG00000028771.7|protein tyrosine phosphatase, non-receptor type 12
mm10_v2_chr2_-_39190687_39190746	0.161243	GUAACAG	ENSMUST00000142872.1|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion 	ENSMUST00000038874.5|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion
mm10_v2_chr18_+_65430945_65430973	0.16	GUAACAG	ENSMUST00000049248.5|Malt1|ENSMUSG00000032688.7|mucosa associated lymphoid tissue lymphoma translocation gene 1
mm10_v2_chr16_+_32608920_32608964	0.158682	GUAACAG	ENSMUST00000023486.8|Tfrc|ENSMUSG00000022797.9|transferrin receptor
mm10_v2_chr1_+_93235836_93235842	0.158632	GUAACAG	ENSMUST00000062202.7|Sned1|ENSMUSG00000047793.7|sushi, nidogen and EGF-like domains 1
mm10_v2_chr9_+_44604844_44604921	0.158538	GUAACAG	ENSMUST00000170489.1|Ddx6|ENSMUSG00000032097.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm10_v2_chr2_-_18392736_18392838	0.15845	GUAACAG	ENSMUST00000091418.5|Dnajc1|ENSMUSG00000026740.6|DnaJ (Hsp40) homolog, subfamily C, member 1 	ENSMUST00000166495.1|Dnajc1|ENSMUSG00000026740.6|DnaJ (Hsp40) homolog, subfamily C, member 1
mm10_v2_chr2_+_121955964_121956001	0.153794	GUAACAG	ENSMUST00000036647.6|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr5_-_108132541_108132570	0.153276	GUAACAG	ENSMUST00000119437.1|Tmed5|ENSMUSG00000063406.5|transmembrane emp24 protein transport domain containing 5 	ENSMUST00000118036.1|Tmed5|ENSMUSG00000063406.5|transmembrane emp24 protein transport domain containing 5
mm10_v2_chr6_+_51523901_51523941	0.151209	GUAACAG	ENSMUST00000049152.8|Snx10|ENSMUSG00000038301.9|sorting nexin 10
mm10_v2_chr19_+_36554661_36554688	0.151031	GUAACAG	ENSMUST00000169036.2|Hectd2|ENSMUSG00000041180.7|HECT domain containing 2 	ENSMUST00000047247.5|Hectd2|ENSMUSG00000041180.7|HECT domain containing 2
mm10_v2_chr13_-_92131494_92131680	0.148044	GUAACAG	ENSMUST00000099326.3|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2 	ENSMUST00000146492.1|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2
mm10_v2_chr5_+_102481374_102481391	0.147631	GUAACAG	ENSMUST00000094559.2|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24 	ENSMUST00000073302.5|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24
mm10_v2_chr16_-_62786742_62786797	0.146947	GUAACAG	ENSMUST00000152553.1|Nsun3|ENSMUSG00000050312.5|NOL1/NOP2/Sun domain family member 3 	ENSMUST00000063089.5|Nsun3|ENSMUSG00000050312.5|NOL1/NOP2/Sun domain family member 3
mm10_v2_chr18_+_10725530_10725564	0.145683	GUAACAG	ENSMUST00000052838.4|Mib1|ENSMUSG00000024294.7|mindbomb homolog 1 (Drosophila)
mm10_v2_chr10_+_85102627_85102719	0.144172	GUAACAG	ENSMUST00000095383.4|AI597468|ENSMUSG00000060935.5|expressed sequence AI597468
mm10_v2_chr9_+_47530173_47530373	0.141955	GUAACAG	ENSMUST00000114548.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000152459.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000143026.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000085909.2|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000114547.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000034581.3|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1
mm10_v2_chr1_+_5083105_5083173	0.140522	GUAACAG	ENSMUST00000044369.7|Atp6v1h|ENSMUSG00000033793.7|ATPase, H+ transporting, lysosomal V1 subunit H
mm10_v2_chr14_+_46882854_46882973	0.139678	GUAACAG	ENSMUST00000022386.8|Samd4|ENSMUSG00000021838.10|sterile alpha motif domain containing 4 	ENSMUST00000100672.3|Samd4|ENSMUSG00000021838.10|sterile alpha motif domain containing 4
mm10_v2_chr14_-_21989475_21989601	0.139485	GUAACAG	ENSMUST00000043409.7|Zfp503|ENSMUSG00000039081.9|zinc finger protein 503
mm10_v2_chr11_-_29515017_29515040	0.137662	GUAACAG	ENSMUST00000133103.1|Prorsd1|ENSMUSG00000032673.5|prolyl-tRNA synthetase domain containing 1 	ENSMUST00000039900.3|Prorsd1|ENSMUSG00000032673.5|prolyl-tRNA synthetase domain containing 1
mm10_v2_chr3_-_32737147_32737147	0.137606	GUAACAG	ENSMUST00000043966.7|Mrpl47|ENSMUSG00000037531.7|mitochondrial ribosomal protein L47
mm10_v2_chr18_+_35598607_35598653	0.137509	GUAACAG	ENSMUST00000041314.8|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115737.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115736.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2 	ENSMUST00000115735.1|Paip2|ENSMUSG00000037058.8|polyadenylate-binding protein-interacting protein 2
mm10_v2_chr15_-_59082026_59082090	0.135543	GUAACAG	ENSMUST00000080371.6|Mtss1|ENSMUSG00000022353.9|metastasis suppressor 1
mm10_v2_chr6_-_99666762_99666786	0.135456	GUAACAG	ENSMUST00000032151.2|Eif4e3|ENSMUSG00000093661.1|eukaryotic translation initiation factor 4E member 3
mm10_v2_chr2_+_3713449_3713474	0.133232	GUAACAG	ENSMUST00000027965.4|Fam107b|ENSMUSG00000026655.8|family with sequence similarity 107, member B
mm10_v2_chr3_-_108562349_108562466	0.129269	GUAACAG	ENSMUST00000090546.5|Tmem167b|ENSMUSG00000068732.5|transmembrane protein 167B
mm10_v2_chr13_+_55209776_55209788	0.128158	GUAACAG	ENSMUST00000099490.2|Nsd1|ENSMUSG00000021488.7|nuclear receptor-binding SET-domain protein 1
mm10_v2_chr11_-_94321957_94321988	0.126882	GUAACAG	ENSMUST00000166312.1|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae) 	ENSMUST00000107821.2|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae) 	ENSMUST00000021226.7|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae) 	ENSMUST00000107820.1|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae)
mm10_v2_chr5_-_92310003_92310024	0.12526	GUAACAG	ENSMUST00000031364.1|Sdad1|ENSMUSG00000029415.1|SDA1 domain containing 1
mm10_v2_chrX_+_82948861_82948915	0.122026	GUAACAG	ENSMUST00000114000.1|Dmd|ENSMUSG00000045103.11|dystrophin, muscular dystrophy
mm10_v2_chr4_-_109476666_109476727	0.12068	GUAACAG	ENSMUST00000030284.3|Rnf11|ENSMUSG00000028557.4|ring finger protein 11
mm10_v2_chrX_-_164027965_164027997	0.12051	GUAACAG	ENSMUST00000033739.4|Car5b|ENSMUSG00000031373.4|carbonic anhydrase 5b, mitochondrial
mm10_v2_chr5_-_20951769_20951824	0.119603	GUAACAG	ENSMUST00000036489.5|Rsbn1l|ENSMUSG00000039968.5|round spermatid basic protein 1-like
mm10_v2_chr3_+_103914560_103914605	0.118433	GUAACAG	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chrX_+_68678541_68678554	0.117848	GUAACAG	ENSMUST00000088546.5|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chr5_-_52190484_52190524	0.116073	GUAACAG	ENSMUST00000031061.7|Dhx15|ENSMUSG00000029169.7|DEAH (Asp-Glu-Ala-His) box polypeptide 15
mm10_v2_chr5_+_36868467_36868560	0.114638	GUAACAG	ENSMUST00000031003.7|Ppp2r2c|ENSMUSG00000029120.7|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform
mm10_v2_chr1_-_9967932_9967932	0.111879	GUAACAG	ENSMUST00000185184.1|Tcf24|ENSMUSG00000099032.1|transcription factor 24
mm10_v2_chr3_-_58525867_58525873	0.10943	GUAACAG	ENSMUST00000029385.7|Serp1|ENSMUSG00000027808.7|stress-associated endoplasmic reticulum protein 1
mm10_v2_chr9_+_27790947_27790991	0.104685	GUAACAG	ENSMUST00000115243.2|Opcml|ENSMUSG00000062257.6|opioid binding protein/cell adhesion molecule-like
mm10_v2_chr13_+_49341549_49341623	0.104614	GUAACAG	ENSMUST00000110084.2|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000048544.6|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000110085.3|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila)
mm10_v2_chr5_-_135349991_135350040	0.104482	GUAACAG	ENSMUST00000044972.7|Fkbp6|ENSMUSG00000040013.8|FK506 binding protein 6
mm10_v2_chr15_+_81400132_81400215	0.101607	GUAACAG	ENSMUST00000163754.1|Xpnpep3|ENSMUSG00000022401.5|X-prolyl aminopeptidase (aminopeptidase P) 3, putative 	ENSMUST00000041609.4|Xpnpep3|ENSMUSG00000022401.5|X-prolyl aminopeptidase (aminopeptidase P) 3, putative
mm10_v2_chr14_-_8172986_8173003	0.100087	GUAACAG	ENSMUST00000022268.8|Pdhb|ENSMUSG00000021748.8|pyruvate dehydrogenase (lipoamide) beta
mm10_v2_chr12_+_111039334_111039400	0.0999417	GUAACAG	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr6_+_113077354_113077382	0.0995846	GUAACAG	ENSMUST00000042889.5|Setd5|ENSMUSG00000034269.6|SET domain containing 5
mm10_v2_chr10_-_23349887_23349919	0.0994105	GUAACAG	ENSMUST00000074366.6|Eya4|ENSMUSG00000010461.8|eyes absent 4 homolog (Drosophila) 	ENSMUST00000092665.4|Eya4|ENSMUSG00000010461.8|eyes absent 4 homolog (Drosophila)
mm10_v2_chrX_-_13846508_13846591	0.0968035	GUAACAG	ENSMUST00000115436.2|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000033321.4|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000115438.3|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm10_v2_chr17_-_65613521_65613555	0.0964747	GUAACAG	ENSMUST00000024897.8|Vapa|ENSMUSG00000024091.8|vesicle-associated membrane protein, associated protein A
mm10_v2_chr7_+_120677579_120677630	0.095694	GUAACAG	ENSMUST00000060175.6|BC030336|ENSMUSG00000046096.6|cDNA sequence BC030336
mm10_v2_chr2_-_64097994_64098023	0.0950289	GUAACAG	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr8_-_89044162_89044195	0.0948589	GUAACAG	ENSMUST00000034090.6|Sall1|ENSMUSG00000031665.6|sal-like 1 (Drosophila)
mm10_v2_chr19_+_7494033_7494068	0.0923971	GUAACAG	ENSMUST00000170373.1|Atl3|ENSMUSG00000024759.7|atlastin GTPase 3
mm10_v2_chr9_-_91365756_91365774	0.0907229	GUAACAG	ENSMUST00000034927.6|Zic1|ENSMUSG00000032368.8|zinc finger protein of the cerebellum 1
mm10_v2_chr13_+_48261427_48261427	0.0903358	GUAACAG	ENSMUST00000021810.1|Id4|ENSMUSG00000021379.1|inhibitor of DNA binding 4
mm10_v2_chr12_-_84218835_84218890	0.0888004	GUAACAG	ENSMUST00000046266.6|Elmsan1|ENSMUSG00000042507.8|ELM2 and Myb/SANT-like domain containing 1
mm10_v2_chr19_+_6046576_6046662	0.0849032	GUAACAG	ENSMUST00000138532.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin 	ENSMUST00000129081.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin 	ENSMUST00000156550.1|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin
mm10_v2_chr15_-_38078842_38078860	0.0817884	GUAACAG	ENSMUST00000110336.2|Ubr5|ENSMUSG00000037487.6|ubiquitin protein ligase E3 component n-recognin 5
mm10_v2_chr1_-_130715734_130715825	0.0791507	GUAACAG	ENSMUST00000066863.6|Pfkfb2|ENSMUSG00000026409.8|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 	ENSMUST00000050406.4|Pfkfb2|ENSMUSG00000026409.8|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm10_v2_chr2_-_73892530_73892555	0.0785917	GUAACAG	ENSMUST00000136958.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112010.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000128531.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112017.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr10_-_40302186_40302206	0.0779955	GUAACAG	ENSMUST00000099945.4|Amd1|ENSMUSG00000075232.4|S-adenosylmethionine decarboxylase 1
mm10_v2_chr15_+_96287518_96287604	0.0768943	GUAACAG	ENSMUST00000134985.2|Arid2|ENSMUSG00000033237.12|AT rich interactive domain 2 (ARID, RFX-like) 	ENSMUST00000096250.4|Arid2|ENSMUSG00000033237.12|AT rich interactive domain 2 (ARID, RFX-like)
mm10_v2_chr11_-_100472725_100472759	0.0753981	GUAACAG	ENSMUST00000056665.3|Klhl11|ENSMUSG00000048732.5|kelch-like 11
mm10_v2_chr18_+_56572822_56572822	0.0747829	GUAACAG	ENSMUST00000008445.5|Phax|ENSMUSG00000008301.5|phosphorylated adaptor for RNA export
mm10_v2_chr9_-_50659780_50659801	0.0738314	GUAACAG	ENSMUST00000034567.3|Dlat|ENSMUSG00000000168.3|dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
mm10_v2_chr9_+_7184514_7184567	0.0737244	GUAACAG	ENSMUST00000034499.8|Dcun1d5|ENSMUSG00000032002.9|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)
mm10_v2_chr1_-_132067924_132067948	0.0732281	GUAACAG	ENSMUST00000046658.3|Mfsd4|ENSMUSG00000059149.11|major facilitator superfamily domain containing 4
mm10_v2_chr11_-_115535804_115535863	0.071387	GUAACAG	ENSMUST00000117589.1|Sumo2|ENSMUSG00000020738.10|SMT3 suppressor of mif two 3 homolog 2 (yeast) 	ENSMUST00000121185.1|Sumo2|ENSMUSG00000020738.10|SMT3 suppressor of mif two 3 homolog 2 (yeast)
mm10_v2_chr1_-_64121456_64121491	0.0665511	GUAACAG	ENSMUST00000142009.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous) 	ENSMUST00000114086.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr18_+_5591860_5591902	0.066172	GUAACAG	ENSMUST00000025081.5|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1 	ENSMUST00000159390.1|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1
mm10_v2_chr19_+_55742242_55742468	0.0647545	GUAACAG	ENSMUST00000111652.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111649.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111651.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111653.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111656.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000127233.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000153888.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr2_+_62664279_62664300	0.0633492	GUAACAG	ENSMUST00000028257.2|Gca|ENSMUSG00000026893.4|grancalcin
mm10_v2_chr4_-_134535268_134535314	0.0595929	GUAACAG	ENSMUST00000102550.3|Mtfr1l|ENSMUSG00000046671.12|mitochondrial fission regulator 1-like
mm10_v2_chr12_-_21373550_21373593	0.0595129	GUAACAG	ENSMUST00000101551.3|Adam17|ENSMUSG00000052593.9|a disintegrin and metallopeptidase domain 17
mm10_v2_chr19_+_57361009_57361113	0.0590736	GUAACAG	ENSMUST00000036407.4|Fam160b1|ENSMUSG00000033478.4|family with sequence similarity 160, member B1
mm10_v2_chr13_-_36734450_36734492	0.058031	GUAACAG	ENSMUST00000037623.8|Nrn1|ENSMUSG00000039114.9|neuritin 1
mm10_v2_chr7_-_109986445_109986480	0.0567137	GUAACAG	ENSMUST00000094097.5|Tmem41b|ENSMUSG00000047554.7|transmembrane protein 41B
mm10_v2_chr10_+_51677756_51677789	0.0552555	GUAACAG	ENSMUST00000122922.1|Rfx6|ENSMUSG00000019900.11|regulatory factor X, 6
mm10_v2_chr13_-_96132568_96132628	0.0548788	GUAACAG	ENSMUST00000161263.1|Sv2c|ENSMUSG00000051111.9|synaptic vesicle glycoprotein 2c
mm10_v2_chr16_-_22265950_22266005	0.0515888	GUAACAG	ENSMUST00000161286.1|Tra2b|ENSMUSG00000022858.9|transformer 2 beta homolog (Drosophila)
mm10_v2_chr18_-_47368830_47368878	0.0502921	GUAACAG	ENSMUST00000019791.7|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000115449.2|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr3_+_58415689_58415689	0.0501661	GUAACAG	ENSMUST00000099090.2|Tsc22d2|ENSMUSG00000027806.5|TSC22 domain family, member 2
mm10_v2_chr11_-_120991305_120991339	0.0472833	GUAACAG	ENSMUST00000018274.3|Csnk1d|ENSMUSG00000025162.11|casein kinase 1, delta
mm10_v2_chr8_+_85171322_85171322	0.0461541	GUAACAG	ENSMUST00000076896.5|Gm6531|ENSMUSG00000062687.5|predicted gene 6531
mm10_v2_chr1_-_16619437_16619489	0.0449646	GUAACAG	ENSMUST00000117146.1|Ube2w|ENSMUSG00000025939.11|ubiquitin-conjugating enzyme E2W (putative)
mm10_v2_chr2_-_33371400_33371484	0.0431464	GUAACAG	ENSMUST00000113164.1|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1 	ENSMUST00000091039.2|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1 	ENSMUST00000042615.6|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1
mm10_v2_chr1_+_66175286_66175348	0.0404499	GUAACAG	ENSMUST00000114017.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2 	ENSMUST00000114015.1|Map2|ENSMUSG00000015222.11|microtubule-associated protein 2
mm10_v2_chr11_+_17159263_17159357	0.0366622	GUAACAG	ENSMUST00000102880.4|Ppp3r1|ENSMUSG00000033953.10|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm10_v2_chr5_-_24842579_24842624	0.0348769	GUAACAG	ENSMUST00000030787.8|Rheb|ENSMUSG00000028945.8|Ras homolog enriched in brain
mm10_v2_chr1_-_176807124_176807124	0.0345395	GUAACAG	ENSMUST00000057037.7|Cep170|ENSMUSG00000057335.6|centrosomal protein 170
mm10_v2_chr12_-_15816762_15816881	0.0333446	GUAACAG	ENSMUST00000020922.7|Trib2|ENSMUSG00000020601.7|tribbles homolog 2 (Drosophila)
mm10_v2_chr8_+_78509319_78509399	0.027459	GUAACAG	ENSMUST00000034111.8|Slc10a7|ENSMUSG00000031684.10|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm10_v2_chr13_+_83504032_83504050	0.0272816	GUAACAG	ENSMUST00000163888.1|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C 	ENSMUST00000005722.7|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C
mm10_v2_chr17_+_75005523_75005568	0.0272348	GUAACAG	ENSMUST00000001927.5|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr1_+_132417409_132417464	0.0267073	GUAACAG	ENSMUST00000045110.7|Dstyk|ENSMUSG00000042046.9|dual serine/threonine and tyrosine protein kinase
mm10_v2_chr3_+_134828993_134829015	0.0264409	GUAACAG	ENSMUST00000029822.4|Tacr3|ENSMUSG00000028172.4|tachykinin receptor 3
mm10_v2_chr11_+_101552849_101552901	0.0236296	GUAACAG	ENSMUST00000107213.1|Nbr1|ENSMUSG00000017119.13|neighbor of Brca1 gene 1 	ENSMUST00000107208.1|Nbr1|ENSMUSG00000017119.13|neighbor of Brca1 gene 1 	ENSMUST00000107212.1|Nbr1|ENSMUSG00000017119.13|neighbor of Brca1 gene 1 	ENSMUST00000127421.1|Nbr1|ENSMUSG00000017119.13|neighbor of Brca1 gene 1
mm10_v2_chr7_-_111082997_111083037	0.0212941	GUAACAG	ENSMUST00000161051.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000160132.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000106666.3|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000162415.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2
mm10_v2_chr19_+_21272276_21272296	0.0204126	GUAACAG	ENSMUST00000025659.4|Zfand5|ENSMUSG00000024750.4|zinc finger, AN1-type domain 5
mm10_v2_chr17_-_26021853_26021866	0.0194499	GUAACAG	ENSMUST00000118828.1|Rab11fip3|ENSMUSG00000037098.11|RAB11 family interacting protein 3 (class II)
mm10_v2_chr13_+_118714678_118714701	0.0179049	GUAACAG	ENSMUST00000022246.8|Fgf10|ENSMUSG00000021732.8|fibroblast growth factor 10
mm10_v2_chr8_-_8660773_8660773	0.0177974	GUAACAG	ENSMUST00000001319.7|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr3_-_105053125_105053151	0.0156137	GUAACAG	ENSMUST00000077548.5|Cttnbp2nl|ENSMUSG00000062127.5|CTTNBP2 N-terminal like
mm10_v2_chr2_-_172043466_172043466	0.0155009	GUAACAG	ENSMUST00000087950.3|Cbln4|ENSMUSG00000067578.3|cerebellin 4 precursor protein
mm10_v2_chr9_+_72925622_72925671	0.0142631	GUAACAG	ENSMUST00000038489.5|Pygo1|ENSMUSG00000034910.5|pygopus 1
mm10_v2_chr2_-_156887056_156887084	0.0134664	GUAACAG	ENSMUST00000029164.2|Sla2|ENSMUSG00000027636.5|Src-like-adaptor 2
mm10_v2_chr15_+_37233036_37233073	0.0119502	GUAACAG	ENSMUST00000161405.1|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila) 	ENSMUST00000022895.8|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila) 	ENSMUST00000161532.1|Grhl2|ENSMUSG00000022286.9|grainyhead-like 2 (Drosophila)
mm10_v2_chr16_+_11322876_11322911	0.0109981	GUAACAG	ENSMUST00000180792.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr7_+_121392266_121392296	0.0106009	GUAACAG	ENSMUST00000084628.3|Hs3st2|ENSMUSG00000046321.7|heparan sulfate (glucosamine) 3-O-sulfotransferase 2
mm10_v2_chr3_+_61364507_61364633	0.0105584	GUAACAG	ENSMUST00000049064.2|Rap2b|ENSMUSG00000036894.2|RAP2B, member of RAS oncogene family
mm10_v2_chr18_-_77713978_77714010	0.0103251	GUAACAG	ENSMUST00000074653.4|8030462N17Rik|ENSMUSG00000047466.9|RIKEN cDNA 8030462N17 gene
mm10_v2_chr11_-_74724670_74724702	0.00841213	GUAACAG	ENSMUST00000021091.8|Pafah1b1|ENSMUSG00000020745.9|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm10_v2_chrX_+_6779306_6779306	0.0060231	GUAACAG	ENSMUST00000067410.7|Dgkk|ENSMUSG00000062393.7|diacylglycerol kinase kappa
mm10_v2_chr5_-_5266038_5266292	0.00560129	GUAACAG	ENSMUST00000115451.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000115452.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000131392.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr16_+_41532999_41533069	0.00493953	GUAACAG	ENSMUST00000099761.3|Lsamp|ENSMUSG00000061080.5|limbic system-associated membrane protein
mm10_v2_chr3_-_51277470_51277514	0.00472503	GUAACAG	ENSMUST00000108053.2|Elf2|ENSMUSG00000037174.12|E74-like factor 2 	ENSMUST00000108051.1|Elf2|ENSMUSG00000037174.12|E74-like factor 2
mm10_v2_chr9_+_118606687_118606751	0.00463351	GUAACAG	ENSMUST00000044165.7|Itga9|ENSMUSG00000039115.7|integrin alpha 9
mm10_v2_chr10_-_35711891_35711891	0.00340857	GUAACAG	ENSMUST00000080898.2|Amd2|ENSMUSG00000063953.2|S-adenosylmethionine decarboxylase 2
