mm10_v2_chr6_+_86078070_86078089	2.91322	GGCAGUG	ENSMUST00000032069.5|Add2|ENSMUSG00000030000.8|adducin 2 (beta)
mm10_v2_chr11_-_102088471_102088530	1.34199	GGCAGUG	ENSMUST00000017458.4|Mpp2|ENSMUSG00000017314.6|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
mm10_v2_chr1_-_119422239_119422291	1.29035	GGCAGUG	ENSMUST00000038765.5|Inhbb|ENSMUSG00000037035.5|inhibin beta-B
mm10_v2_chr13_+_95696851_95696869	1.07343	GGCAGUG	ENSMUST00000022182.4|F2rl2|ENSMUSG00000021675.4|coagulation factor II (thrombin) receptor-like 2
mm10_v2_chr7_+_117380937_117380992	1.06442	GGCAGUG	ENSMUST00000032892.5|Xylt1|ENSMUSG00000030657.5|xylosyltransferase 1
mm10_v2_chrX_+_160390684_160390730	0.99879	GGCAGUG	ENSMUST00000112408.2|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112402.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112401.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112400.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112405.2|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112404.2|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000146805.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64
mm10_v2_chr16_-_43979050_43979093	0.994246	GGCAGUG	ENSMUST00000165648.1|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23 	ENSMUST00000036321.7|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23
mm10_v2_chrX_-_142306170_142306294	0.987121	GGCAGUG	ENSMUST00000134825.2|Kcne1l|ENSMUSG00000090122.3|potassium voltage-gated channel, Isk-related family, member 1-like, pseudogene
mm10_v2_chr7_+_26061495_26061495	0.974304	GGCAGUG	ENSMUST00000005669.7|Cyp2b13|ENSMUSG00000040583.7|cytochrome P450, family 2, subfamily b, polypeptide 13
mm10_v2_chr19_-_5273080_5273129	0.95781	GGCAGUG	ENSMUST00000025786.7|Pacs1|ENSMUSG00000024855.9|phosphofurin acidic cluster sorting protein 1
mm10_v2_chr10_-_62340514_62340549	0.95496	GGCAGUG	ENSMUST00000099691.4|Hk1|ENSMUSG00000037012.12|hexokinase 1
mm10_v2_chr4_-_49597860_49597892	0.931404	GGCAGUG	ENSMUST00000042750.2|Tmem246|ENSMUSG00000039611.2|transmembrane protein 246
mm10_v2_chr2_-_157079212_157079276	0.874462	GGCAGUG	ENSMUST00000069098.6|Soga1|ENSMUSG00000055485.6|suppressor of glucose, autophagy associated 1
mm10_v2_chr11_+_82892116_82892128	0.870037	GGCAGUG	ENSMUST00000018988.5|Fndc8|ENSMUSG00000018844.6|fibronectin type III domain containing 8
mm10_v2_chr7_+_27258725_27258815	0.846219	GGCAGUG	ENSMUST00000079258.6|Numbl|ENSMUSG00000063160.6|numb-like
mm10_v2_chr2_+_156840077_156840141	0.835166	GGCAGUG	ENSMUST00000081335.6|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2 	ENSMUST00000073352.3|Tgif2|ENSMUSG00000062175.7|TGFB-induced factor homeobox 2
mm10_v2_chr17_-_81649607_81649607	0.833424	GGCAGUG	ENSMUST00000163680.2|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000086538.3|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000163123.1|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1
mm10_v2_chr1_+_91540553_91540578	0.816871	GGCAGUG	ENSMUST00000027538.7|Asb1|ENSMUSG00000026311.10|ankyrin repeat and SOCS box-containing 1
mm10_v2_chr4_-_88033328_88033373	0.72483	GGCAGUG	ENSMUST00000078090.5|Mllt3|ENSMUSG00000028496.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm10_v2_chr4_-_68954351_68954397	0.721125	GGCAGUG	ENSMUST00000030036.5|Brinp1|ENSMUSG00000028351.5|bone morphogenic protein/retinoic acid inducible neural specific 1
mm10_v2_chr5_-_112392213_112392213	0.720993	GGCAGUG	ENSMUST00000031291.7|Asphd2|ENSMUSG00000029348.7|aspartate beta-hydroxylase domain containing 2
mm10_v2_chrX_+_71962971_71963013	0.719234	GGCAGUG	ENSMUST00000048790.6|Prrg3|ENSMUSG00000033361.7|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
mm10_v2_chr4_-_45084538_45084604	0.694045	GGCAGUG	ENSMUST00000052236.6|Fbxo10|ENSMUSG00000048232.6|F-box protein 10
mm10_v2_chr6_+_42264983_42265032	0.682813	GGCAGUG	ENSMUST00000031895.6|Casp2|ENSMUSG00000029863.7|caspase 2
mm10_v2_chr13_+_54371340_54371352	0.65993	GGCAGUG	ENSMUST00000026985.8|Cplx2|ENSMUSG00000025867.8|complexin 2
mm10_v2_chr9_-_53975246_53975348	0.632569	GGCAGUG	ENSMUST00000048409.7|Elmod1|ENSMUSG00000041986.9|ELMO/CED-12 domain containing 1
mm10_v2_chr5_+_37050854_37050865	0.618521	GGCAGUG	ENSMUST00000043794.4|Jakmip1|ENSMUSG00000063646.7|janus kinase and microtubule interacting protein 1
mm10_v2_chr12_-_50649190_50649281	0.611291	GGCAGUG	ENSMUST00000002765.7|Prkd1|ENSMUSG00000002688.7|protein kinase D1
mm10_v2_chr13_-_28953690_28953713	0.605586	GGCAGUG	ENSMUST00000067230.5|Sox4|ENSMUSG00000076431.4|SRY-box containing gene 4
mm10_v2_chr5_-_137072254_137072277	0.605123	GGCAGUG	ENSMUST00000077523.3|Serpine1|ENSMUSG00000037411.4|serine (or cysteine) peptidase inhibitor, clade E, member 1 	ENSMUST00000041388.4|Serpine1|ENSMUSG00000037411.4|serine (or cysteine) peptidase inhibitor, clade E, member 1
mm10_v2_chr11_+_116198853_116198903	0.583182	GGCAGUG	ENSMUST00000021130.6|Ten1|ENSMUSG00000020778.6|TEN1 telomerase capping complex subunit
mm10_v2_chr3_-_127409044_127409064	0.574234	GGCAGUG	ENSMUST00000182704.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr4_+_11191726_11191789	0.566547	GGCAGUG	ENSMUST00000029866.9|Ccne2|ENSMUSG00000028212.10|cyclin E2 	ENSMUST00000108324.3|Ccne2|ENSMUSG00000028212.10|cyclin E2
mm10_v2_chr2_+_4400958_4400975	0.562932	GGCAGUG	ENSMUST00000075767.7|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr11_-_76509419_76509435	0.542709	GGCAGUG	ENSMUST00000094012.4|Abr|ENSMUSG00000017631.12|active BCR-related gene
mm10_v2_chr2_-_163918683_163918683	0.531305	GGCAGUG	ENSMUST00000044734.2|Rims4|ENSMUSG00000035226.5|regulating synaptic membrane exocytosis 4
mm10_v2_chr5_+_113490447_113490548	0.52907	GGCAGUG	ENSMUST00000094452.3|Wscd2|ENSMUSG00000063430.8|WSC domain containing 2
mm10_v2_chr3_+_123446913_123446913	0.515455	GGCAGUG	ENSMUST00000029603.8|Prss12|ENSMUSG00000027978.8|protease, serine, 12 neurotrypsin (motopsin)
mm10_v2_chr17_+_28801090_28801145	0.513667	GGCAGUG	ENSMUST00000004985.9|Brpf3|ENSMUSG00000063952.9|bromodomain and PHD finger containing, 3
mm10_v2_chr15_+_103240405_103240432	0.498406	GGCAGUG	ENSMUST00000036004.9|Hnrnpa1|ENSMUSG00000046434.9|heterogeneous nuclear ribonucleoprotein A1 	ENSMUST00000087351.7|Hnrnpa1|ENSMUSG00000046434.9|heterogeneous nuclear ribonucleoprotein A1
mm10_v2_chr5_-_22344690_22344710	0.49611	GGCAGUG	ENSMUST00000062372.7|Reln|ENSMUSG00000042453.8|reelin 	ENSMUST00000161356.1|Reln|ENSMUSG00000042453.8|reelin
mm10_v2_chrX_-_48454152_48454193	0.495191	GGCAGUG	ENSMUST00000114958.1|Elf4|ENSMUSG00000031103.6|E74-like factor 4 (ets domain transcription factor)
mm10_v2_chr9_-_100571049_100571128	0.474178	GGCAGUG	ENSMUST00000093792.2|Slc35g2|ENSMUSG00000070287.2|solute carrier family 35, member G2
mm10_v2_chr14_-_65425453_65425472	0.471505	GGCAGUG	ENSMUST00000059339.5|Pnoc|ENSMUSG00000045731.5|prepronociceptin
mm10_v2_chr17_-_23645264_23645309	0.465665	GGCAGUG	ENSMUST00000024696.7|Mmp25|ENSMUSG00000023903.7|matrix metallopeptidase 25
mm10_v2_chr9_+_96196246_96196280	0.461631	GGCAGUG	ENSMUST00000165120.2|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2 	ENSMUST00000034982.9|Tfdp2|ENSMUSG00000032411.9|transcription factor Dp 2
mm10_v2_chr1_+_75382114_75382149	0.456529	GGCAGUG	ENSMUST00000113590.1|Speg|ENSMUSG00000026207.10|SPEG complex locus 	ENSMUST00000148515.1|Speg|ENSMUSG00000026207.10|SPEG complex locus
mm10_v2_chr2_-_34913976_34914043	0.455561	GGCAGUG	ENSMUST00000028232.3|Phf19|ENSMUSG00000026873.3|PHD finger protein 19
mm10_v2_chr1_-_37541003_37541046	0.44156	GGCAGUG	ENSMUST00000151952.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm10_v2_chr7_+_126272589_126272619	0.434326	GGCAGUG	ENSMUST00000056028.9|Sbk1|ENSMUSG00000042978.9|SH3-binding kinase 1
mm10_v2_chr15_+_98632220_98632390	0.429945	GGCAGUG	ENSMUST00000109150.1|Cacnb3|ENSMUSG00000003352.7|calcium channel, voltage-dependent, beta 3 subunit
mm10_v2_chr4_-_136835843_136835988	0.428792	GGCAGUG	ENSMUST00000105846.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000059287.7|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000105845.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2
mm10_v2_chr9_-_85327110_85327128	0.428054	GGCAGUG	ENSMUST00000034802.8|Fam46a|ENSMUSG00000032265.8|family with sequence similarity 46, member A
mm10_v2_chr6_+_127887582_127887639	0.425933	GGCAGUG	ENSMUST00000032501.4|Tspan11|ENSMUSG00000030351.4|tetraspanin 11
mm10_v2_chr15_-_91573181_91573261	0.425627	GGCAGUG	ENSMUST00000109283.1|Slc2a13|ENSMUSG00000036298.10|solute carrier family 2 (facilitated glucose transporter), member 13
mm10_v2_chr19_-_6128208_6128304	0.424654	GGCAGUG	ENSMUST00000025702.7|Snx15|ENSMUSG00000024787.7|sorting nexin 15
mm10_v2_chr6_+_4747306_4747372	0.417435	GGCAGUG	ENSMUST00000175823.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10 	ENSMUST00000176204.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10 	ENSMUST00000166678.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10
mm10_v2_chr13_-_117025505_117025541	0.416084	GGCAGUG	ENSMUST00000022239.6|Parp8|ENSMUSG00000021725.8|poly (ADP-ribose) polymerase family, member 8
mm10_v2_chr1_-_135585314_135585364	0.409048	GGCAGUG	ENSMUST00000040599.8|Nav1|ENSMUSG00000009418.9|neuron navigator 1 	ENSMUST00000067414.6|Nav1|ENSMUSG00000009418.9|neuron navigator 1
mm10_v2_chr12_-_84876479_84876532	0.404719	GGCAGUG	ENSMUST00000163189.1|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2 	ENSMUST00000110254.2|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2 	ENSMUST00000002073.6|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2
mm10_v2_chr9_+_109875541_109875591	0.39813	GGCAGUG	ENSMUST00000094324.3|Cdc25a|ENSMUSG00000032477.9|cell division cycle 25A
mm10_v2_chr2_+_162943474_162943516	0.395287	GGCAGUG	ENSMUST00000035751.5|L3mbtl1|ENSMUSG00000035576.7|l(3)mbt-like (Drosophila) 	ENSMUST00000156954.1|L3mbtl1|ENSMUSG00000035576.7|l(3)mbt-like (Drosophila)
mm10_v2_chr2_+_179442427_179442442	0.395221	GGCAGUG	ENSMUST00000000314.6|Cdh4|ENSMUSG00000000305.6|cadherin 4
mm10_v2_chr17_-_67354459_67354485	0.385282	GGCAGUG	ENSMUST00000037974.8|Ptprm|ENSMUSG00000033278.9|protein tyrosine phosphatase, receptor type, M
mm10_v2_chr7_-_25788635_25788710	0.385013	GGCAGUG	ENSMUST00000002677.4|Axl|ENSMUSG00000002602.10|AXL receptor tyrosine kinase 	ENSMUST00000085948.4|Axl|ENSMUSG00000002602.10|AXL receptor tyrosine kinase
mm10_v2_chr2_+_121289589_121289606	0.380597	GGCAGUG	ENSMUST00000094639.3|Map1a|ENSMUSG00000027254.7|microtubule-associated protein 1 A
mm10_v2_chr10_+_128377086_128377155	0.377006	GGCAGUG	ENSMUST00000014642.3|Ankrd52|ENSMUSG00000014498.3|ankyrin repeat domain 52
mm10_v2_chr11_+_75650501_75650544	0.373183	GGCAGUG	ENSMUST00000102505.3|Myo1c|ENSMUSG00000017774.13|myosin IC
mm10_v2_chr2_-_157007039_157007154	0.363877	GGCAGUG	ENSMUST00000103129.2|Dsn1|ENSMUSG00000027635.9|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae) 	ENSMUST00000103130.1|Dsn1|ENSMUSG00000027635.9|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)
mm10_v2_chr11_-_98053415_98053467	0.363244	GGCAGUG	ENSMUST00000017544.2|Stac2|ENSMUSG00000017400.4|SH3 and cysteine rich domain 2
mm10_v2_chr7_+_139085984_139086048	0.358888	GGCAGUG	ENSMUST00000026551.8|Dpysl4|ENSMUSG00000025478.9|dihydropyrimidinase-like 4
mm10_v2_chr11_-_106160101_106160168	0.356611	GGCAGUG	ENSMUST00000045923.3|Limd2|ENSMUSG00000040699.7|LIM domain containing 2
mm10_v2_chr3_-_27710413_27710467	0.347498	GGCAGUG	ENSMUST00000046157.4|Fndc3b|ENSMUSG00000039286.7|fibronectin type III domain containing 3B
mm10_v2_chr6_+_47877204_47877204	0.337066	GGCAGUG	ENSMUST00000061890.7|Zfp282|ENSMUSG00000025821.9|zinc finger protein 282
mm10_v2_chr5_-_113908685_113908758	0.334556	GGCAGUG	ENSMUST00000004646.6|Coro1c|ENSMUSG00000004530.6|coronin, actin binding protein 1C
mm10_v2_chr11_-_96977660_96977711	0.333632	GGCAGUG	ENSMUST00000107626.1|Sp2|ENSMUSG00000018678.6|Sp2 transcription factor 	ENSMUST00000107624.1|Sp2|ENSMUSG00000018678.6|Sp2 transcription factor
mm10_v2_chr1_-_133753681_133753857	0.327773	GGCAGUG	ENSMUST00000125659.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000165602.2|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000048953.7|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr9_-_89622986_89622986	0.325301	GGCAGUG	ENSMUST00000044491.6|AF529169|ENSMUSG00000039313.8|cDNA sequence AF529169
mm10_v2_chr11_+_94990996_94991035	0.320474	GGCAGUG	ENSMUST00000038696.5|Ppp1r9b|ENSMUSG00000038976.6|protein phosphatase 1, regulatory subunit 9B
mm10_v2_chr12_+_77239036_77239074	0.312997	GGCAGUG	ENSMUST00000062804.7|Fut8|ENSMUSG00000021065.9|fucosyltransferase 8
mm10_v2_chr9_+_21337828_21337859	0.309179	GGCAGUG	ENSMUST00000034697.7|Slc44a2|ENSMUSG00000057193.7|solute carrier family 44, member 2
mm10_v2_chr14_+_30479565_30479685	0.307128	GGCAGUG	ENSMUST00000022535.7|Dcp1a|ENSMUSG00000021962.8|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm10_v2_chr17_-_51832666_51832678	0.301874	GGCAGUG	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr2_+_71117923_71118061	0.298711	GGCAGUG	ENSMUST00000028403.2|Cybrd1|ENSMUSG00000027015.4|cytochrome b reductase 1
mm10_v2_chr11_+_101176041_101176041	0.295014	GGCAGUG	ENSMUST00000103109.3|Cntnap1|ENSMUSG00000017167.6|contactin associated protein-like 1
mm10_v2_chr8_-_70439557_70439612	0.29269	GGCAGUG	ENSMUST00000076615.5|Crtc1|ENSMUSG00000003575.7|CREB regulated transcription coactivator 1
mm10_v2_chr17_+_84511832_84511913	0.28914	GGCAGUG	ENSMUST00000047206.5|Plekhh2|ENSMUSG00000040852.5|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
mm10_v2_chr15_-_97908261_97908316	0.286488	GGCAGUG	ENSMUST00000023119.8|Vdr|ENSMUSG00000022479.9|vitamin D receptor
mm10_v2_chr1_-_119837613_119837673	0.28117	GGCAGUG	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr5_+_91517615_91517694	0.278337	GGCAGUG	ENSMUST00000040576.9|Parm1|ENSMUSG00000034981.9|prostate androgen-regulated mucin-like protein 1
mm10_v2_chr1_-_36558349_36558366	0.276896	GGCAGUG	ENSMUST00000114991.1|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C 	ENSMUST00000114992.1|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
mm10_v2_chr7_+_16401187_16401233	0.272362	GGCAGUG	ENSMUST00000098789.3|Zc3h4|ENSMUSG00000059273.7|zinc finger CCCH-type containing 4
mm10_v2_chr8_+_124793061_124793092	0.271797	GGCAGUG	ENSMUST00000041106.7|Trim67|ENSMUSG00000036913.8|tripartite motif-containing 67
mm10_v2_chr8_+_116943387_116943424	0.270263	GGCAGUG	ENSMUST00000109099.3|Atmin|ENSMUSG00000047388.10|ATM interactor
mm10_v2_chr11_-_114066174_114066218	0.266382	GGCAGUG	ENSMUST00000041627.7|Sdk2|ENSMUSG00000041592.10|sidekick homolog 2 (chicken)
mm10_v2_chr14_-_70159433_70159502	0.264983	GGCAGUG	ENSMUST00000058240.7|9930012K11Rik|ENSMUSG00000044551.7|RIKEN cDNA 9930012K11 gene 	ENSMUST00000153871.1|9930012K11Rik|ENSMUSG00000044551.7|RIKEN cDNA 9930012K11 gene
mm10_v2_chr10_-_110000219_110000219	0.26236	GGCAGUG	ENSMUST00000032719.7|Nav3|ENSMUSG00000020181.9|neuron navigator 3
mm10_v2_chr6_-_13839916_13839942	0.257122	GGCAGUG	ENSMUST00000060442.7|Gpr85|ENSMUSG00000048216.7|G protein-coupled receptor 85
mm10_v2_chr12_-_101819048_101819061	0.256825	GGCAGUG	ENSMUST00000021603.8|Fbln5|ENSMUSG00000021186.8|fibulin 5
mm10_v2_chr9_+_108991902_108991969	0.254384	GGCAGUG	ENSMUST00000147989.1|Pfkfb4|ENSMUSG00000025648.11|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 	ENSMUST00000051873.8|Pfkfb4|ENSMUSG00000025648.11|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
mm10_v2_chr3_+_94478831_94478831	0.254198	GGCAGUG	ENSMUST00000029784.5|Celf3|ENSMUSG00000028137.5|CUGBP, Elav-like family member 3
mm10_v2_chr10_+_85386813_85386846	0.244829	GGCAGUG	ENSMUST00000105307.1|Btbd11|ENSMUSG00000020042.9|BTB (POZ) domain containing 11 	ENSMUST00000020231.3|Btbd11|ENSMUSG00000020042.9|BTB (POZ) domain containing 11
mm10_v2_chr8_+_93810832_93810843	0.244437	GGCAGUG	ENSMUST00000034198.8|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O 	ENSMUST00000125716.1|Gnao1|ENSMUSG00000031748.9|guanine nucleotide binding protein, alpha O
mm10_v2_chr18_+_61105844_61105890	0.242195	GGCAGUG	ENSMUST00000115268.3|Csf1r|ENSMUSG00000024621.9|colony stimulating factor 1 receptor
mm10_v2_chr7_+_80186835_80186904	0.238579	GGCAGUG	ENSMUST00000107383.1|Sema4b|ENSMUSG00000030539.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 	ENSMUST00000032754.7|Sema4b|ENSMUSG00000030539.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
mm10_v2_chr11_-_98022594_98022671	0.234723	GGCAGUG	ENSMUST00000103144.3|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000017552.6|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000092736.4|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit 	ENSMUST00000107562.1|Cacnb1|ENSMUSG00000020882.11|calcium channel, voltage-dependent, beta 1 subunit
mm10_v2_chr6_-_101377897_101378016	0.234327	GGCAGUG	ENSMUST00000075994.6|Pdzrn3|ENSMUSG00000035357.10|PDZ domain containing RING finger 3
mm10_v2_chr3_+_90341654_90341654	0.228675	GGCAGUG	ENSMUST00000049382.4|Gatad2b|ENSMUSG00000042390.5|GATA zinc finger domain containing 2B
mm10_v2_chr7_+_43463145_43463185	0.227734	GGCAGUG	ENSMUST00000107977.1|Vsig10l|ENSMUSG00000070604.3|ZV-set and immunoglobulin domain containing 10 like
mm10_v2_chr4_-_16013868_16013888	0.226938	GGCAGUG	ENSMUST00000037198.3|Osgin2|ENSMUSG00000041153.3|oxidative stress induced growth inhibitor family member 2
mm10_v2_chrX_+_161162744_161162775	0.225892	GGCAGUG	ENSMUST00000074802.5|Scml2|ENSMUSG00000000037.10|sex comb on midleg-like 2 (Drosophila) 	ENSMUST00000019101.4|Scml2|ENSMUSG00000000037.10|sex comb on midleg-like 2 (Drosophila) 	ENSMUST00000112345.1|Scml2|ENSMUSG00000000037.10|sex comb on midleg-like 2 (Drosophila)
mm10_v2_chr15_-_98296083_98296157	0.22413	GGCAGUG	ENSMUST00000169721.1|Zfp641|ENSMUSG00000022987.5|zinc finger protein 641 	ENSMUST00000023722.5|Zfp641|ENSMUSG00000022987.5|zinc finger protein 641
mm10_v2_chr8_+_95703037_95703063	0.21769	GGCAGUG	ENSMUST00000073139.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4 	ENSMUST00000080666.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4
mm10_v2_chr6_-_118197732_118197744	0.215627	GGCAGUG	ENSMUST00000032201.5|Ret|ENSMUSG00000030110.7|ret proto-oncogene 	ENSMUST00000088790.3|Ret|ENSMUSG00000030110.7|ret proto-oncogene
mm10_v2_chr2_+_106693185_106693278	0.214839	GGCAGUG	ENSMUST00000111063.1|Mpped2|ENSMUSG00000016386.9|metallophosphoesterase domain containing 2
mm10_v2_chr7_-_126799163_126799254	0.214659	GGCAGUG	ENSMUST00000032934.5|Aldoa|ENSMUSG00000030695.7|aldolase A, fructose-bisphosphate
mm10_v2_chr2_-_25983236_25983290	0.211242	GGCAGUG	ENSMUST00000114167.2|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000091268.4|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1 	ENSMUST00000183461.1|Camsap1|ENSMUSG00000026933.11|calmodulin regulated spectrin-associated protein 1
mm10_v2_chr6_-_31563978_31563989	0.21075	GGCAGUG	ENSMUST00000026698.7|Podxl|ENSMUSG00000025608.9|podocalyxin-like
mm10_v2_chr3_+_131110350_131110471	0.210433	GGCAGUG	ENSMUST00000066849.6|Lef1|ENSMUSG00000027985.8|lymphoid enhancer binding factor 1 	ENSMUST00000106341.2|Lef1|ENSMUSG00000027985.8|lymphoid enhancer binding factor 1 	ENSMUST00000029611.7|Lef1|ENSMUSG00000027985.8|lymphoid enhancer binding factor 1
mm10_v2_chr9_+_108986163_108986163	0.203271	GGCAGUG	ENSMUST00000052724.3|Ucn2|ENSMUSG00000049699.3|urocortin 2
mm10_v2_chr11_+_105589970_105590028	0.203188	GGCAGUG	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chr2_-_93334467_93334515	0.203136	GGCAGUG	ENSMUST00000111265.2|Tspan18|ENSMUSG00000027217.7|tetraspanin 18
mm10_v2_chr17_+_46202740_46202855	0.202754	GGCAGUG	ENSMUST00000087031.5|Xpo5|ENSMUSG00000067150.5|exportin 5
mm10_v2_chr19_+_8941865_8942050	0.195985	GGCAGUG	ENSMUST00000096240.2|Mta2|ENSMUSG00000071646.3|metastasis-associated gene family, member 2
mm10_v2_chr1_-_156939626_156939657	0.19366	GGCAGUG	ENSMUST00000063199.6|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000027886.7|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000172057.1|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2
mm10_v2_chr15_-_79546741_79546787	0.192359	GGCAGUG	ENSMUST00000054014.7|Ddx17|ENSMUSG00000055065.6|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
mm10_v2_chr7_-_98178254_98178274	0.191781	GGCAGUG	ENSMUST00000040971.7|Capn5|ENSMUSG00000035547.8|calpain 5
mm10_v2_chr11_+_106276715_106276748	0.191081	GGCAGUG	ENSMUST00000044462.3|Tcam1|ENSMUSG00000020712.5|testicular cell adhesion molecule 1
mm10_v2_chr11_+_61485431_61485461	0.185974	GGCAGUG	ENSMUST00000064783.3|Mfap4|ENSMUSG00000042436.6|microfibrillar-associated protein 4 	ENSMUST00000040522.6|Mfap4|ENSMUSG00000042436.6|microfibrillar-associated protein 4
mm10_v2_chr4_+_58943575_58943638	0.182359	GGCAGUG	ENSMUST00000107554.1|Zkscan16|ENSMUSG00000038630.8|zinc finger with KRAB and SCAN domains 16
mm10_v2_chr4_+_21931291_21931366	0.180226	GGCAGUG	ENSMUST00000029908.7|Faxc|ENSMUSG00000028246.7|failed axon connections homolog (Drosophila)
mm10_v2_chr8_-_122699066_122699119	0.178931	GGCAGUG	ENSMUST00000127984.1|Cbfa2t3|ENSMUSG00000006362.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
mm10_v2_chr1_+_132298606_132298631	0.176433	GGCAGUG	ENSMUST00000046071.4|Klhdc8a|ENSMUSG00000042115.4|kelch domain containing 8A
mm10_v2_chr5_+_75152274_75152297	0.175617	GGCAGUG	ENSMUST00000000476.8|Pdgfra|ENSMUSG00000029231.9|platelet derived growth factor receptor, alpha polypeptide
mm10_v2_chr9_+_70678950_70679010	0.173934	GGCAGUG	ENSMUST00000067880.6|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr15_-_66969616_66969647	0.173669	GGCAGUG	ENSMUST00000170903.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000166420.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000005256.6|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1 	ENSMUST00000164070.1|Ndrg1|ENSMUSG00000005125.6|N-myc downstream regulated gene 1
mm10_v2_chr10_+_126978690_126978749	0.173016	GGCAGUG	ENSMUST00000105256.2|Ctdsp2|ENSMUSG00000078429.2|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm10_v2_chr18_+_86394952_86394968	0.170871	GGCAGUG	ENSMUST00000058829.2|Neto1|ENSMUSG00000050321.2|neuropilin (NRP) and tolloid (TLL)-like 1
mm10_v2_chr9_+_65908967_65909020	0.164828	GGCAGUG	ENSMUST00000034949.3|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1 	ENSMUST00000154589.1|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1
mm10_v2_chr9_-_107635330_107635353	0.164806	GGCAGUG	ENSMUST00000055704.6|Gnai2|ENSMUSG00000032562.8|guanine nucleotide binding protein (G protein), alpha inhibiting 2
mm10_v2_chr3_-_107518001_107518023	0.164758	GGCAGUG	ENSMUST00000169449.1|Slc6a17|ENSMUSG00000027894.8|solute carrier family 6 (neurotransmitter transporter), member 17 	ENSMUST00000029499.8|Slc6a17|ENSMUSG00000027894.8|solute carrier family 6 (neurotransmitter transporter), member 17
mm10_v2_chr14_+_14012491_14012693	0.162953	GGCAGUG	ENSMUST00000022257.2|Atxn7|ENSMUSG00000021738.4|ataxin 7
mm10_v2_chr5_+_19907502_19907551	0.162758	GGCAGUG	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr4_+_59805829_59805914	0.160301	GGCAGUG	ENSMUST00000030080.6|Snx30|ENSMUSG00000028385.8|sorting nexin family member 30
mm10_v2_chr8_-_111933761_111933816	0.159648	GGCAGUG	ENSMUST00000034429.7|Tmem231|ENSMUSG00000031951.7|transmembrane protein 231
mm10_v2_chr19_-_5663701_5663710	0.158913	GGCAGUG	ENSMUST00000071857.5|Sipa1|ENSMUSG00000056917.6|signal-induced proliferation associated gene 1 	ENSMUST00000080824.5|Sipa1|ENSMUSG00000056917.6|signal-induced proliferation associated gene 1 	ENSMUST00000164304.1|Sipa1|ENSMUSG00000056917.6|signal-induced proliferation associated gene 1 	ENSMUST00000169854.1|Sipa1|ENSMUSG00000056917.6|signal-induced proliferation associated gene 1
mm10_v2_chr2_-_137116624_137116644	0.15622	GGCAGUG	ENSMUST00000028735.7|Jag1|ENSMUSG00000027276.7|jagged 1
mm10_v2_chr1_-_166002591_166002609	0.15538	GGCAGUG	ENSMUST00000111429.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000176800.1|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr14_+_63436394_63436525	0.149681	GGCAGUG	ENSMUST00000121288.1|Fam167a|ENSMUSG00000035095.11|family with sequence similarity 167, member A
mm10_v2_chr12_+_52699297_52699411	0.145674	GGCAGUG	ENSMUST00000095737.3|Akap6|ENSMUSG00000061603.7|A kinase (PRKA) anchor protein 6
mm10_v2_chr2_+_28513243_28513326	0.145252	GGCAGUG	ENSMUST00000028170.8|Ralgds|ENSMUSG00000026821.9|ral guanine nucleotide dissociation stimulator
mm10_v2_chr9_-_79718518_79718592	0.142999	GGCAGUG	ENSMUST00000071750.6|Col12a1|ENSMUSG00000032332.11|collagen, type XII, alpha 1
mm10_v2_chr2_-_32353247_32353282	0.142855	GGCAGUG	ENSMUST00000078352.5|Dnm1|ENSMUSG00000026825.11|dynamin 1 	ENSMUST00000113352.2|Dnm1|ENSMUSG00000026825.11|dynamin 1 	ENSMUST00000113365.1|Dnm1|ENSMUSG00000026825.11|dynamin 1
mm10_v2_chr1_-_54194048_54194048	0.141637	GGCAGUG	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr2_+_10372426_10372497	0.138939	GGCAGUG	ENSMUST00000114864.2|Sfmbt2|ENSMUSG00000061186.9|Scm-like with four mbt domains 2 	ENSMUST00000116594.2|Sfmbt2|ENSMUSG00000061186.9|Scm-like with four mbt domains 2 	ENSMUST00000041105.6|Sfmbt2|ENSMUSG00000061186.9|Scm-like with four mbt domains 2
mm10_v2_chr15_+_82274935_82275034	0.138251	GGCAGUG	ENSMUST00000023095.6|Sept3|ENSMUSG00000022456.9|septin 3
mm10_v2_chr2_-_13011747_13011778	0.137489	GGCAGUG	ENSMUST00000061545.5|C1ql3|ENSMUSG00000049630.5|C1q-like 3
mm10_v2_chr15_+_89499598_89499653	0.135091	GGCAGUG	ENSMUST00000109309.1|Shank3|ENSMUSG00000022623.9|SH3/ankyrin domain gene 3
mm10_v2_chr3_+_7366598_7366641	0.133157	GGCAGUG	ENSMUST00000028999.6|Pkia|ENSMUSG00000027499.7|protein kinase inhibitor, alpha
mm10_v2_chr16_-_26989974_26989974	0.132583	GGCAGUG	ENSMUST00000089832.4|Gmnc|ENSMUSG00000068428.6|geminin coiled-coil domain containing
mm10_v2_chr2_+_32587057_32587123	0.131826	GGCAGUG	ENSMUST00000102818.4|St6galnac4|ENSMUSG00000079442.6|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
mm10_v2_chr4_+_42916647_42916712	0.126565	GGCAGUG	ENSMUST00000132173.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178 	ENSMUST00000107975.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178
mm10_v2_chr16_+_17451981_17452034	0.125865	GGCAGUG	ENSMUST00000006293.3|Crkl|ENSMUSG00000006134.3|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
mm10_v2_chr11_+_4986824_4986894	0.12557	GGCAGUG	ENSMUST00000009234.9|Ap1b1|ENSMUSG00000009090.11|adaptor protein complex AP-1, beta 1 subunit 	ENSMUST00000109897.1|Ap1b1|ENSMUSG00000009090.11|adaptor protein complex AP-1, beta 1 subunit
mm10_v2_chr6_-_82939676_82939769	0.124852	GGCAGUG	ENSMUST00000000641.9|Sema4f|ENSMUSG00000000627.9|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain 	ENSMUST00000113982.1|Sema4f|ENSMUSG00000000627.9|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
mm10_v2_chr11_-_49712674_49712726	0.124346	GGCAGUG	ENSMUST00000020624.6|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6 	ENSMUST00000145353.1|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6
mm10_v2_chr8_+_84021444_84021475	0.121008	GGCAGUG	ENSMUST00000055077.6|Palm3|ENSMUSG00000047986.6|paralemmin 3
mm10_v2_chr16_+_91729281_91729390	0.120672	GGCAGUG	ENSMUST00000114001.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000113999.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000064797.5|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000114002.2|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000095909.3|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000056482.7|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000113996.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A)
mm10_v2_chr19_+_16132812_16132910	0.118748	GGCAGUG	ENSMUST00000025541.5|Gnaq|ENSMUSG00000024639.5|guanine nucleotide binding protein, alpha q polypeptide
mm10_v2_chr1_-_106714217_106714330	0.118392	GGCAGUG	ENSMUST00000112751.1|Bcl2|ENSMUSG00000057329.6|B cell leukemia/lymphoma 2
mm10_v2_chrX_+_49470450_49470548	0.116533	GGCAGUG	ENSMUST00000114904.3|Arhgap36|ENSMUSG00000036198.6|Rho GTPase activating protein 36
mm10_v2_chr15_+_100469034_100469075	0.116195	GGCAGUG	ENSMUST00000037001.8|Letmd1|ENSMUSG00000037353.8|LETM1 domain containing 1
mm10_v2_chr6_+_115134899_115134982	0.114071	GGCAGUG	ENSMUST00000009538.5|Syn2|ENSMUSG00000009394.7|synapsin II 	ENSMUST00000169345.1|Syn2|ENSMUSG00000009394.7|synapsin II
mm10_v2_chr17_+_35916541_35916566	0.114012	GGCAGUG	ENSMUST00000087211.2|Ppp1r10|ENSMUSG00000039220.10|protein phosphatase 1, regulatory subunit 10
mm10_v2_chr5_+_147430407_147430545	0.113682	GGCAGUG	ENSMUST00000176600.1|Pan3|ENSMUSG00000029647.9|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm10_v2_chr4_+_120854786_120854843	0.112316	GGCAGUG	ENSMUST00000071093.2|Rims3|ENSMUSG00000032890.11|regulating synaptic membrane exocytosis 3
mm10_v2_chr5_+_134099704_134099760	0.110253	GGCAGUG	ENSMUST00000016088.8|Gatsl2|ENSMUSG00000015944.8|GATS protein-like 2
mm10_v2_chr4_-_55532453_55532485	0.109161	GGCAGUG	ENSMUST00000132746.1|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut) 	ENSMUST00000107619.2|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut)
mm10_v2_chr2_-_30903255_30903297	0.103063	GGCAGUG	ENSMUST00000102852.3|Ptges|ENSMUSG00000050737.11|prostaglandin E synthase
mm10_v2_chr11_-_75438900_75438946	0.101482	GGCAGUG	ENSMUST00000108437.1|Serpinf2|ENSMUSG00000038224.6|serine (or cysteine) peptidase inhibitor, clade F, member 2
mm10_v2_chr1_+_75360321_75360338	0.100197	GGCAGUG	ENSMUST00000027409.9|Des|ENSMUSG00000026208.9|desmin
mm10_v2_chr19_-_7105729_7105729	0.0975597	GGCAGUG	ENSMUST00000113383.2|Flrt1|ENSMUSG00000047787.7|fibronectin leucine rich transmembrane protein 1
mm10_v2_chr11_+_70657196_70657285	0.09611	GGCAGUG	ENSMUST00000157027.1|Eno3|ENSMUSG00000060600.9|enolase 3, beta muscle 	ENSMUST00000072841.5|Eno3|ENSMUSG00000060600.9|enolase 3, beta muscle 	ENSMUST00000108548.1|Eno3|ENSMUSG00000060600.9|enolase 3, beta muscle 	ENSMUST00000126241.1|Eno3|ENSMUSG00000060600.9|enolase 3, beta muscle
mm10_v2_chr7_+_120842824_120842836	0.0957775	GGCAGUG	ENSMUST00000047875.8|Eef2k|ENSMUSG00000035064.10|eukaryotic elongation factor-2 kinase
mm10_v2_chr7_+_19076242_19076273	0.094702	GGCAGUG	ENSMUST00000032570.7|Dmwd|ENSMUSG00000030410.10|dystrophia myotonica-containing WD repeat motif 	ENSMUST00000108479.1|Dmwd|ENSMUSG00000030410.10|dystrophia myotonica-containing WD repeat motif
mm10_v2_chr10_-_5922385_5922407	0.0943162	GGCAGUG	ENSMUST00000131996.1|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17 	ENSMUST00000064225.7|Rgs17|ENSMUSG00000019775.11|regulator of G-protein signaling 17
mm10_v2_chr15_-_76817970_76818174	0.0940196	GGCAGUG	ENSMUST00000175843.1|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000177026.1|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000176736.1|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000036176.8|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000176219.1|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000077821.3|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39
mm10_v2_chr2_+_65620829_65620857	0.0937703	GGCAGUG	ENSMUST00000028377.7|Scn2a1|ENSMUSG00000075318.6|sodium channel, voltage-gated, type II, alpha 1
mm10_v2_chr9_-_90270712_90270804	0.0926095	GGCAGUG	ENSMUST00000041767.7|Tbc1d2b|ENSMUSG00000037410.7|TBC1 domain family, member 2B 	ENSMUST00000144348.1|Tbc1d2b|ENSMUSG00000037410.7|TBC1 domain family, member 2B
mm10_v2_chr2_-_74659861_74659861	0.0920476	GGCAGUG	ENSMUST00000001867.6|Evx2|ENSMUSG00000001815.9|even skipped homeotic gene 2 homolog
mm10_v2_chr11_+_75630974_75631076	0.0892145	GGCAGUG	ENSMUST00000006286.2|Inpp5k|ENSMUSG00000006127.3|inositol polyphosphate 5-phosphatase K
mm10_v2_chr1_-_152090308_152090332	0.0878852	GGCAGUG	ENSMUST00000044581.7|1700025G04Rik|ENSMUSG00000032666.10|RIKEN cDNA 1700025G04 gene
mm10_v2_chr15_-_102257449_102257517	0.0867841	GGCAGUG	ENSMUST00000043172.8|Rarg|ENSMUSG00000001288.8|retinoic acid receptor, gamma
mm10_v2_chr19_-_6840590_6840644	0.086526	GGCAGUG	ENSMUST00000170516.2|Rps6ka4|ENSMUSG00000024952.6|ribosomal protein S6 kinase, polypeptide 4 	ENSMUST00000025903.5|Rps6ka4|ENSMUSG00000024952.6|ribosomal protein S6 kinase, polypeptide 4
mm10_v2_chr2_-_152398046_152398076	0.0864068	GGCAGUG	ENSMUST00000063332.8|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12 	ENSMUST00000182625.1|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12
mm10_v2_chr4_-_141790891_141790931	0.0857239	GGCAGUG	ENSMUST00000038014.4|Dnajc16|ENSMUSG00000040697.4|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENSMUST00000153880.1|Dnajc16|ENSMUSG00000040697.4|DnaJ (Hsp40) homolog, subfamily C, member 16
mm10_v2_chr8_-_57653023_57653039	0.0854683	GGCAGUG	ENSMUST00000034021.5|Galnt7|ENSMUSG00000031608.7|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
mm10_v2_chr6_-_52234902_52234960	0.0833098	GGCAGUG	ENSMUST00000125581.1|Hoxa10|ENSMUSG00000000938.11|homeobox A10
mm10_v2_chrX_+_56346390_56346415	0.077604	GGCAGUG	ENSMUST00000101560.3|Zfp449|ENSMUSG00000073176.4|zinc finger protein 449
mm10_v2_chr7_-_84086494_84086509	0.0773041	GGCAGUG	ENSMUST00000064174.5|9930013L23Rik|ENSMUSG00000052353.7|RIKEN cDNA 9930013L23 gene
mm10_v2_chr3_+_38886940_38886940	0.0753946	GGCAGUG	ENSMUST00000061260.7|Fat4|ENSMUSG00000046743.6|FAT tumor suppressor homolog 4 (Drosophila)
mm10_v2_chr2_+_68861433_68861510	0.0753499	GGCAGUG	ENSMUST00000028426.2|Cers6|ENSMUSG00000027035.4|ceramide synthase 6
mm10_v2_chr12_+_71015966_71016063	0.0752328	GGCAGUG	ENSMUST00000046305.5|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr8_+_4493022_4493199	0.0741902	GGCAGUG	ENSMUST00000177010.2|Cers4|ENSMUSG00000008206.9|ceramide synthase 4 	ENSMUST00000176042.1|Cers4|ENSMUSG00000008206.9|ceramide synthase 4 	ENSMUST00000008350.9|Cers4|ENSMUSG00000008206.9|ceramide synthase 4
mm10_v2_chr3_+_89229046_89229066	0.0733823	GGCAGUG	ENSMUST00000041142.3|Muc1|ENSMUSG00000042784.3|mucin 1, transmembrane
mm10_v2_chr18_+_78349754_78349754	0.0731387	GGCAGUG	ENSMUST00000164064.1|Gm6133|ENSMUSG00000090451.1|predicted gene 6133
mm10_v2_chr6_+_114282635_114282817	0.072594	GGCAGUG	ENSMUST00000032454.5|Slc6a1|ENSMUSG00000030310.8|solute carrier family 6 (neurotransmitter transporter, GABA), member 1
mm10_v2_chr5_-_143269958_143270022	0.0719953	GGCAGUG	ENSMUST00000161448.1|Zfp316|ENSMUSG00000046658.10|zinc finger protein 316
mm10_v2_chr13_+_13590402_13590456	0.0719719	GGCAGUG	ENSMUST00000110559.1|Lyst|ENSMUSG00000019726.10|lysosomal trafficking regulator
mm10_v2_chr18_+_61045139_61045206	0.0714182	GGCAGUG	ENSMUST00000025522.4|Pdgfrb|ENSMUSG00000024620.5|platelet derived growth factor receptor, beta polypeptide 	ENSMUST00000115274.1|Pdgfrb|ENSMUSG00000024620.5|platelet derived growth factor receptor, beta polypeptide
mm10_v2_chr11_+_119393060_119393100	0.071385	GGCAGUG	ENSMUST00000131035.2|Rnf213|ENSMUSG00000070327.7|ring finger protein 213 	ENSMUST00000093902.5|Rnf213|ENSMUSG00000070327.7|ring finger protein 213
mm10_v2_chr14_-_16575456_16575501	0.0699736	GGCAGUG	ENSMUST00000063750.6|Rarb|ENSMUSG00000017491.8|retinoic acid receptor, beta
mm10_v2_chr2_-_57114970_57115038	0.0696203	GGCAGUG	ENSMUST00000028166.2|Nr4a2|ENSMUSG00000026826.7|nuclear receptor subfamily 4, group A, member 2
mm10_v2_chr5_-_8367982_8368107	0.0689477	GGCAGUG	ENSMUST00000088761.4|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115386.1|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000050166.7|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000046838.7|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115388.2|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000088744.5|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115385.1|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22
mm10_v2_chr10_+_128411616_128411676	0.0684882	GGCAGUG	ENSMUST00000096386.5|Rnf41|ENSMUSG00000025373.7|ring finger protein 41 	ENSMUST00000171342.1|Rnf41|ENSMUSG00000025373.7|ring finger protein 41
mm10_v2_chr1_-_172206775_172206804	0.0679744	GGCAGUG	ENSMUST00000013842.5|Pea15a|ENSMUSG00000013698.6|phosphoprotein enriched in astrocytes 15A 	ENSMUST00000111247.1|Pea15a|ENSMUSG00000013698.6|phosphoprotein enriched in astrocytes 15A
mm10_v2_chr19_-_5924797_5924823	0.0657058	GGCAGUG	ENSMUST00000055458.4|Cdc42ep2|ENSMUSG00000045664.4|CDC42 effector protein (Rho GTPase binding) 2
mm10_v2_chr4_-_126753372_126753440	0.0656413	GGCAGUG	ENSMUST00000030637.7|Ncdn|ENSMUSG00000028833.7|neurochondrin 	ENSMUST00000106116.1|Ncdn|ENSMUSG00000028833.7|neurochondrin
mm10_v2_chrX_+_142681398_142681439	0.0655618	GGCAGUG	ENSMUST00000112889.1|Tmem164|ENSMUSG00000047045.11|transmembrane protein 164 	ENSMUST00000101198.2|Tmem164|ENSMUSG00000047045.11|transmembrane protein 164 	ENSMUST00000112891.1|Tmem164|ENSMUSG00000047045.11|transmembrane protein 164 	ENSMUST00000087333.2|Tmem164|ENSMUSG00000047045.11|transmembrane protein 164
mm10_v2_chr11_+_106036867_106036924	0.0640621	GGCAGUG	ENSMUST00000058438.8|Dcaf7|ENSMUSG00000049354.8|DDB1 and CUL4 associated factor 7
mm10_v2_chr8_+_4166556_4166739	0.0638271	GGCAGUG	ENSMUST00000177053.1|Evi5l|ENSMUSG00000011832.9|ecotropic viral integration site 5 like 	ENSMUST00000176149.1|Evi5l|ENSMUSG00000011832.9|ecotropic viral integration site 5 like 	ENSMUST00000176072.1|Evi5l|ENSMUSG00000011832.9|ecotropic viral integration site 5 like 	ENSMUST00000176825.1|Evi5l|ENSMUSG00000011832.9|ecotropic viral integration site 5 like
mm10_v2_chr15_-_77842133_77842175	0.0627735	GGCAGUG	ENSMUST00000016771.6|Myh9|ENSMUSG00000022443.10|myosin, heavy polypeptide 9, non-muscle
mm10_v2_chr3_+_107101551_107101567	0.0620704	GGCAGUG	ENSMUST00000038695.1|Kcna2|ENSMUSG00000040724.1|potassium voltage-gated channel, shaker-related subfamily, member 2
mm10_v2_chr10_-_87493651_87493666	0.0612555	GGCAGUG	ENSMUST00000020243.7|Ascl1|ENSMUSG00000020052.7|achaete-scute complex homolog 1 (Drosophila)
mm10_v2_chr4_+_14864076_14864150	0.0611419	GGCAGUG	ENSMUST00000029875.3|Tmem55a|ENSMUSG00000028221.3|transmembrane protein 55A
mm10_v2_chr15_+_80711292_80711340	0.0579706	GGCAGUG	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr7_+_46845832_46845863	0.0546296	GGCAGUG	ENSMUST00000048209.9|Ldha|ENSMUSG00000063229.8|lactate dehydrogenase A 	ENSMUST00000092621.4|Ldha|ENSMUSG00000063229.8|lactate dehydrogenase A
mm10_v2_chr4_-_126968124_126968154	0.0525404	GGCAGUG	ENSMUST00000106108.2|Zmym4|ENSMUSG00000042446.10|zinc finger, MYM-type 4
mm10_v2_chr5_-_123572976_123573031	0.0487688	GGCAGUG	ENSMUST00000031388.8|Vps33a|ENSMUSG00000029434.8|vacuolar protein sorting 33A (yeast)
mm10_v2_chr19_+_38264761_38264831	0.0466941	GGCAGUG	ENSMUST00000087252.5|Lgi1|ENSMUSG00000067242.5|leucine-rich repeat LGI family, member 1
mm10_v2_chr5_+_3343893_3343945	0.046054	GGCAGUG	ENSMUST00000165117.1|Cdk6|ENSMUSG00000040274.5|cyclin-dependent kinase 6
mm10_v2_chr6_+_38433913_38433965	0.0452454	GGCAGUG	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr8_-_80880479_80880499	0.0437431	GGCAGUG	ENSMUST00000034150.8|Gab1|ENSMUSG00000031714.8|growth factor receptor bound protein 2-associated protein 1
mm10_v2_chrX_+_101429555_101429708	0.0436822	GGCAGUG	ENSMUST00000033673.6|Nono|ENSMUSG00000031311.11|non-POU-domain-containing, octamer binding protein
mm10_v2_chr3_-_90509450_90509506	0.0425196	GGCAGUG	ENSMUST00000107343.1|Chtop|ENSMUSG00000001017.9|chromatin target of PRMT1 	ENSMUST00000001043.7|Chtop|ENSMUSG00000001017.9|chromatin target of PRMT1 	ENSMUST00000107344.1|Chtop|ENSMUSG00000001017.9|chromatin target of PRMT1 	ENSMUST00000076639.4|Chtop|ENSMUSG00000001017.9|chromatin target of PRMT1 	ENSMUST00000107346.1|Chtop|ENSMUSG00000001017.9|chromatin target of PRMT1 	ENSMUST00000146740.1|Chtop|ENSMUSG00000001017.9|chromatin target of PRMT1 	ENSMUST00000107342.1|Chtop|ENSMUSG00000001017.9|chromatin target of PRMT1 	ENSMUST00000049937.6|Chtop|ENSMUSG00000001017.9|chromatin target of PRMT1
mm10_v2_chr1_+_93754899_93754932	0.0421232	GGCAGUG	ENSMUST00000027502.9|Atg4b|ENSMUSG00000026280.11|autophagy related 4B, cysteine peptidase
mm10_v2_chr11_+_88099146_88099181	0.041957	GGCAGUG	ENSMUST00000018522.6|Cuedc1|ENSMUSG00000018378.7|CUE domain containing 1
mm10_v2_chr4_-_127354074_127354086	0.0414532	GGCAGUG	ENSMUST00000106090.1|Gjb4|ENSMUSG00000046623.2|gap junction protein, beta 4 	ENSMUST00000060419.1|Gjb4|ENSMUSG00000046623.2|gap junction protein, beta 4
mm10_v2_chr11_-_61579637_61579707	0.0386798	GGCAGUG	ENSMUST00000147501.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000146455.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108711.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108712.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000001063.8|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108713.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000179936.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000178202.1|Epn2|ENSMUSG00000001036.11|epsin 2
mm10_v2_chr10_-_112928974_112929026	0.0385378	GGCAGUG	ENSMUST00000099276.2|Atxn7l3b|ENSMUSG00000074748.2|ataxin 7-like 3B
mm10_v2_chr2_+_180967218_180967289	0.0383409	GGCAGUG	ENSMUST00000108862.1|Arfgap1|ENSMUSG00000027575.13|ADP-ribosylation factor GTPase activating protein 1 	ENSMUST00000029092.6|Arfgap1|ENSMUSG00000027575.13|ADP-ribosylation factor GTPase activating protein 1 	ENSMUST00000108861.1|Arfgap1|ENSMUSG00000027575.13|ADP-ribosylation factor GTPase activating protein 1 	ENSMUST00000108860.1|Arfgap1|ENSMUSG00000027575.13|ADP-ribosylation factor GTPase activating protein 1
mm10_v2_chr9_+_111311674_111311758	0.0381768	GGCAGUG	ENSMUST00000078626.3|Trank1|ENSMUSG00000062296.4|tetratricopeptide repeat and ankyrin repeat containing 1
mm10_v2_chr8_+_14095849_14095915	0.0373054	GGCAGUG	ENSMUST00000152652.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2 	ENSMUST00000133298.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2
mm10_v2_chr5_+_122850186_122850198	0.0371981	GGCAGUG	ENSMUST00000031434.6|Rnf34|ENSMUSG00000029474.6|ring finger protein 34
mm10_v2_chr2_+_172345565_172345590	0.0336271	GGCAGUG	ENSMUST00000028995.4|Fam210b|ENSMUSG00000027495.4|family with sequence similarity 210, member B
mm10_v2_chr3_+_105452326_105452365	0.0320676	GGCAGUG	ENSMUST00000098761.3|Kcnd3|ENSMUSG00000040896.10|potassium voltage-gated channel, Shal-related family, member 3
mm10_v2_chr17_+_25809085_25809171	0.0301854	GGCAGUG	ENSMUST00000045692.7|Fbxl16|ENSMUSG00000025738.7|F-box and leucine-rich repeat protein 16
mm10_v2_chr8_-_105827190_105827350	0.0285067	GGCAGUG	ENSMUST00000041400.5|Ranbp10|ENSMUSG00000037415.5|RAN binding protein 10
mm10_v2_chr4_+_32983008_32983155	0.0275581	GGCAGUG	ENSMUST00000098190.3|Rragd|ENSMUSG00000028278.8|Ras-related GTP binding D 	ENSMUST00000029946.7|Rragd|ENSMUSG00000028278.8|Ras-related GTP binding D
mm10_v2_chrX_-_95444789_95444872	0.0273351	GGCAGUG	ENSMUST00000084535.5|Amer1|ENSMUSG00000050332.7|APC membrane recruitment 1
mm10_v2_chr6_-_39377681_39377710	0.0256566	GGCAGUG	ENSMUST00000090243.4|Slc37a3|ENSMUSG00000029924.9|solute carrier family 37 (glycerol-3-phosphate transporter), member 3
mm10_v2_chr19_+_47067721_47067768	0.0238823	GGCAGUG	ENSMUST00000026027.5|Taf5|ENSMUSG00000025049.5|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr14_-_70443442_70443476	0.0234827	GGCAGUG	ENSMUST00000000793.5|Polr3d|ENSMUSG00000000776.6|polymerase (RNA) III (DNA directed) polypeptide D
mm10_v2_chr2_-_31845925_31846005	0.0229627	GGCAGUG	ENSMUST00000028188.7|Fibcd1|ENSMUSG00000026841.7|fibrinogen C domain containing 1
mm10_v2_chrX_+_93286499_93286522	0.0217769	GGCAGUG	ENSMUST00000046565.7|Arx|ENSMUSG00000035277.9|aristaless related homeobox 	ENSMUST00000113947.2|Arx|ENSMUSG00000035277.9|aristaless related homeobox
mm10_v2_chr8_+_25518757_25518772	0.021719	GGCAGUG	ENSMUST00000178276.1|Fgfr1|ENSMUSG00000031565.11|fibroblast growth factor receptor 1 	ENSMUST00000179592.1|Fgfr1|ENSMUSG00000031565.11|fibroblast growth factor receptor 1
mm10_v2_chr14_-_100149764_100149764	0.0205781	GGCAGUG	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr3_+_142701067_142701105	0.0190729	GGCAGUG	ENSMUST00000044392.4|Ccbl2|ENSMUSG00000040213.7|cysteine conjugate-beta lyase 2
mm10_v2_chr5_-_31093500_31093615	0.0182352	GGCAGUG	ENSMUST00000031037.7|Slc30a3|ENSMUSG00000029151.8|solute carrier family 30 (zinc transporter), member 3
mm10_v2_chr15_-_97767798_97767972	0.0143549	GGCAGUG	ENSMUST00000129223.2|Rapgef3|ENSMUSG00000022469.10|Rap guanine nucleotide exchange factor (GEF) 3 	ENSMUST00000126854.2|Rapgef3|ENSMUSG00000022469.10|Rap guanine nucleotide exchange factor (GEF) 3 	ENSMUST00000135080.1|Rapgef3|ENSMUSG00000022469.10|Rap guanine nucleotide exchange factor (GEF) 3
mm10_v2_chrX_+_99136119_99136138	0.0136185	GGCAGUG	ENSMUST00000052839.6|Efnb1|ENSMUSG00000031217.8|ephrin B1
mm10_v2_chr1_-_132542934_132542954	0.0129179	GGCAGUG	ENSMUST00000086521.4|Cntn2|ENSMUSG00000053024.8|contactin 2
mm10_v2_chr16_-_91011093_91011113	0.0128454	GGCAGUG	ENSMUST00000170853.1|Synj1|ENSMUSG00000022973.11|synaptojanin 1 	ENSMUST00000118390.2|Synj1|ENSMUSG00000022973.11|synaptojanin 1
mm10_v2_chr1_+_75521521_75521602	0.0126078	GGCAGUG	ENSMUST00000027414.9|Stk11ip|ENSMUSG00000026213.9|serine/threonine kinase 11 interacting protein 	ENSMUST00000113553.1|Stk11ip|ENSMUSG00000026213.9|serine/threonine kinase 11 interacting protein
mm10_v2_chr16_+_20589471_20589582	0.0121319	GGCAGUG	ENSMUST00000100074.3|Vwa5b2|ENSMUSG00000046613.12|von Willebrand factor A domain containing 5B2 	ENSMUST00000096197.4|Vwa5b2|ENSMUSG00000046613.12|von Willebrand factor A domain containing 5B2
mm10_v2_chr11_-_7213897_7213929	0.0113037	GGCAGUG	ENSMUST00000020702.4|Igfbp3|ENSMUSG00000020427.5|insulin-like growth factor binding protein 3 	ENSMUST00000135887.2|Igfbp3|ENSMUSG00000020427.5|insulin-like growth factor binding protein 3
mm10_v2_chr2_-_26445175_26445226	0.0110828	GGCAGUG	ENSMUST00000114082.2|Sec16a|ENSMUSG00000026924.11|SEC16 homolog A (S. cerevisiae) 	ENSMUST00000091252.4|Sec16a|ENSMUSG00000026924.11|SEC16 homolog A (S. cerevisiae)
mm10_v2_chr9_+_94669876_94669928	0.010177	GGCAGUG	ENSMUST00000033463.9|Slc9a9|ENSMUSG00000031129.9|solute carrier family 9 (sodium/hydrogen exchanger), member 9
mm10_v2_chr4_+_62286441_62286516	0.00980263	GGCAGUG	ENSMUST00000084530.2|Slc31a2|ENSMUSG00000066152.5|solute carrier family 31, member 2
mm10_v2_chrX_-_12673540_12673668	0.00839007	GGCAGUG	ENSMUST00000060108.6|1810030O07Rik|ENSMUSG00000044148.6|RIKEN cDNA 1810030O07 gene
mm10_v2_chr12_+_37880700_37880728	0.00674879	GGCAGUG	ENSMUST00000040500.7|Dgkb|ENSMUSG00000036095.10|diacylglycerol kinase, beta
mm10_v2_chrX_+_42149288_42149412	0.00193737	GGCAGUG	ENSMUST00000115073.2|Stag2|ENSMUSG00000025862.8|stromal antigen 2 	ENSMUST00000115072.1|Stag2|ENSMUSG00000025862.8|stromal antigen 2
mm10_v2_chr1_+_10993452_10993478	0.00134735	GGCAGUG	ENSMUST00000027056.5|Prex2|ENSMUSG00000048960.7|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
mm10_v2_chr1_-_161876656_161876682	0.000796521	GGCAGUG	ENSMUST00000048377.5|Suco|ENSMUSG00000040297.7|SUN domain containing ossification factor
mm10_v2_chr16_-_52454074_52454074	0.00077176	GGCAGUG	ENSMUST00000023312.7|Alcam|ENSMUSG00000022636.7|activated leukocyte cell adhesion molecule
mm10_v2_chr5_-_67427794_67427813	0.000277074	GGCAGUG	ENSMUST00000169190.1|Bend4|ENSMUSG00000092060.1|BEN domain containing 4
