mm10_v2_chr2_+_102658640_102658669	3.15791	GGCAAGA	ENSMUST00000080210.3|Slc1a2|ENSMUSG00000005089.9|solute carrier family 1 (glial high affinity glutamate transporter), member 2
mm10_v2_chr6_+_91684061_91684132	0.626139	GGCAAGA	ENSMUST00000032185.7|Slc6a6|ENSMUSG00000030096.7|solute carrier family 6 (neurotransmitter transporter, taurine), member 6
mm10_v2_chr11_-_23497867_23497962	0.582542	GGCAAGA	ENSMUST00000128559.1|Ahsa2|ENSMUSG00000020288.7|AHA1, activator of heat shock protein ATPase 2 	ENSMUST00000147157.1|Ahsa2|ENSMUSG00000020288.7|AHA1, activator of heat shock protein ATPase 2 	ENSMUST00000109539.1|Ahsa2|ENSMUSG00000020288.7|AHA1, activator of heat shock protein ATPase 2
mm10_v2_chr8_-_110805863_110805952	0.576882	GGCAAGA	ENSMUST00000150680.1|Il34|ENSMUSG00000031750.9|interleukin 34 	ENSMUST00000076846.4|Il34|ENSMUSG00000031750.9|interleukin 34
mm10_v2_chr8_+_107150621_107150690	0.562662	GGCAAGA	ENSMUST00000034400.3|Cyb5b|ENSMUSG00000031924.3|cytochrome b5 type B
mm10_v2_chr16_-_23988852_23988852	0.536758	GGCAAGA	ENSMUST00000023151.5|Bcl6|ENSMUSG00000022508.5|B cell leukemia/lymphoma 6
mm10_v2_chr1_-_136960427_136960494	0.519189	GGCAAGA	ENSMUST00000027649.7|Nr5a2|ENSMUSG00000026398.8|nuclear receptor subfamily 5, group A, member 2
mm10_v2_chr5_+_143464493_143464536	0.516074	GGCAAGA	ENSMUST00000045593.8|Daglb|ENSMUSG00000039206.10|diacylglycerol lipase, beta
mm10_v2_chr19_+_25236959_25236982	0.510173	GGCAAGA	ENSMUST00000049400.8|Kank1|ENSMUSG00000032702.10|KN motif and ankyrin repeat domains 1
mm10_v2_chr17_-_46487641_46487682	0.484237	GGCAAGA	ENSMUST00000047034.8|Ttbk1|ENSMUSG00000015599.8|tau tubulin kinase 1
mm10_v2_chr4_+_126103940_126104020	0.477784	GGCAAGA	ENSMUST00000116286.2|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40 	ENSMUST00000094761.4|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40 	ENSMUST00000139524.1|Stk40|ENSMUSG00000042608.9|serine/threonine kinase 40
mm10_v2_chr11_-_3722189_3722222	0.464034	GGCAAGA	ENSMUST00000102950.3|Osbp2|ENSMUSG00000020435.11|oxysterol binding protein 2 	ENSMUST00000101632.3|Osbp2|ENSMUSG00000020435.11|oxysterol binding protein 2
mm10_v2_chr3_+_62338344_62338344	0.455712	GGCAAGA	ENSMUST00000079300.6|Arhgef26|ENSMUSG00000036885.8|Rho guanine nucleotide exchange factor (GEF) 26
mm10_v2_chr6_-_124415037_124415078	0.440049	GGCAAGA	ENSMUST00000035861.5|Pex5|ENSMUSG00000005069.6|peroxisomal biogenesis factor 5 	ENSMUST00000112532.1|Pex5|ENSMUSG00000005069.6|peroxisomal biogenesis factor 5 	ENSMUST00000080557.5|Pex5|ENSMUSG00000005069.6|peroxisomal biogenesis factor 5
mm10_v2_chr15_+_25843264_25843280	0.437045	GGCAAGA	ENSMUST00000022881.7|Fam134b|ENSMUSG00000022270.9|family with sequence similarity 134, member B
mm10_v2_chr6_-_18030435_18030585	0.385354	GGCAAGA	ENSMUST00000010941.2|Wnt2|ENSMUSG00000010797.2|wingless-related MMTV integration site 2
mm10_v2_chr10_+_94036001_94036121	0.352971	GGCAAGA	ENSMUST00000020208.4|Fgd6|ENSMUSG00000020021.4|FYVE, RhoGEF and PH domain containing 6
mm10_v2_chr13_-_55362782_55362804	0.33036	GGCAAGA	ENSMUST00000021940.7|Lman2|ENSMUSG00000021484.7|lectin, mannose-binding 2
mm10_v2_chr6_-_59426279_59426345	0.327203	GGCAAGA	ENSMUST00000051065.4|Gprin3|ENSMUSG00000045441.4|GPRIN family member 3
mm10_v2_chr7_+_97332311_97332331	0.316938	GGCAAGA	ENSMUST00000054107.5|Kctd21|ENSMUSG00000044952.5|potassium channel tetramerisation domain containing 21
mm10_v2_chrX_-_136868537_136868755	0.316005	GGCAAGA	ENSMUST00000058814.6|Rab9b|ENSMUSG00000043463.6|RAB9B, member RAS oncogene family
mm10_v2_chr16_+_42907563_42907684	0.312018	GGCAAGA	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chrX_-_164980310_164980375	0.311631	GGCAAGA	ENSMUST00000004715.1|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2 	ENSMUST00000112248.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chr11_-_86993682_86993707	0.300975	GGCAAGA	ENSMUST00000018571.4|Ypel2|ENSMUSG00000018427.7|yippee-like 2 (Drosophila)
mm10_v2_chr18_-_14682756_14682914	0.287945	GGCAAGA	ENSMUST00000040964.6|Ss18|ENSMUSG00000037013.9|synovial sarcoma translocation, Chromosome 18 	ENSMUST00000092041.3|Ss18|ENSMUSG00000037013.9|synovial sarcoma translocation, Chromosome 18 	ENSMUST00000040924.7|Ss18|ENSMUSG00000037013.9|synovial sarcoma translocation, Chromosome 18
mm10_v2_chr9_-_52168111_52168111	0.282337	GGCAAGA	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chr16_+_24393350_24393428	0.273584	GGCAAGA	ENSMUST00000038053.6|Lpp|ENSMUSG00000033306.8|LIM domain containing preferred translocation partner in lipoma
mm10_v2_chr5_-_76304474_76304548	0.257899	GGCAAGA	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chr3_-_107696462_107696574	0.252961	GGCAAGA	ENSMUST00000029490.8|Ahcyl1|ENSMUSG00000027893.8|S-adenosylhomocysteine hydrolase-like 1
mm10_v2_chr9_+_83548309_83548338	0.250856	GGCAAGA	ENSMUST00000113215.3|Sh3bgrl2|ENSMUSG00000032261.10|SH3 domain binding glutamic acid-rich protein like 2
mm10_v2_chr19_-_6941428_6941518	0.246706	GGCAAGA	ENSMUST00000025909.4|Gpr137|ENSMUSG00000024958.6|G protein-coupled receptor 137 	ENSMUST00000099774.3|Gpr137|ENSMUSG00000024958.6|G protein-coupled receptor 137
mm10_v2_chr1_-_169747634_169747649	0.245791	GGCAAGA	ENSMUST00000027991.5|Rgs4|ENSMUSG00000038530.5|regulator of G-protein signaling 4 	ENSMUST00000111357.1|Rgs4|ENSMUSG00000038530.5|regulator of G-protein signaling 4
mm10_v2_chr17_+_86167777_86167795	0.24574	GGCAAGA	ENSMUST00000097275.2|Prkce|ENSMUSG00000045038.8|protein kinase C, epsilon
mm10_v2_chr12_-_83921899_83921934	0.241147	GGCAAGA	ENSMUST00000117217.1|Numb|ENSMUSG00000021224.8|numb gene homolog (Drosophila)
mm10_v2_chr4_+_125490688_125490704	0.235605	GGCAAGA	ENSMUST00000030676.7|Grik3|ENSMUSG00000001985.9|glutamate receptor, ionotropic, kainate 3
mm10_v2_chr17_-_85090204_85090275	0.22405	GGCAAGA	ENSMUST00000072406.3|Prepl|ENSMUSG00000024127.8|prolyl endopeptidase-like 	ENSMUST00000171795.1|Prepl|ENSMUSG00000024127.8|prolyl endopeptidase-like
mm10_v2_chr14_-_69732510_69732581	0.222419	GGCAAGA	ENSMUST00000036381.8|Chmp7|ENSMUSG00000034190.8|charged multivesicular body protein 7
mm10_v2_chr4_-_66404458_66404509	0.216128	GGCAAGA	ENSMUST00000084496.2|Astn2|ENSMUSG00000028373.10|astrotactin 2
mm10_v2_chrX_+_151344171_151344197	0.212811	GGCAAGA	ENSMUST00000073364.5|Fam120c|ENSMUSG00000025262.8|family with sequence similarity 120, member C
mm10_v2_chr9_+_52047150_52047163	0.204326	GGCAAGA	ENSMUST00000163153.1|Rdx|ENSMUSG00000032050.10|radixin
mm10_v2_chr2_-_161109017_161109027	0.19916	GGCAAGA	ENSMUST00000039782.7|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6 	ENSMUST00000134178.1|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6
mm10_v2_chr1_-_56972437_56972502	0.197476	GGCAAGA	ENSMUST00000042857.7|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr1_-_16519284_16519336	0.190336	GGCAAGA	ENSMUST00000162751.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000027052.6|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000149320.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr16_+_41532999_41533069	0.188636	GGCAAGA	ENSMUST00000099761.3|Lsamp|ENSMUSG00000061080.5|limbic system-associated membrane protein
mm10_v2_chr4_+_106561027_106561038	0.188317	GGCAAGA	ENSMUST00000047973.3|Dhcr24|ENSMUSG00000034926.3|24-dehydrocholesterol reductase
mm10_v2_chr3_+_102469918_102469932	0.186353	GGCAAGA	ENSMUST00000106925.2|Ngf|ENSMUSG00000027859.4|nerve growth factor 	ENSMUST00000035952.3|Ngf|ENSMUSG00000027859.4|nerve growth factor
mm10_v2_chr1_+_153899937_153899953	0.18433	GGCAAGA	ENSMUST00000086199.5|Glul|ENSMUSG00000026473.9|glutamate-ammonia ligase (glutamine synthetase)
mm10_v2_chr2_-_64097994_64098023	0.176827	GGCAAGA	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr11_-_78165521_78165589	0.170426	GGCAAGA	ENSMUST00000017530.3|Traf4|ENSMUSG00000017386.4|TNF receptor associated factor 4
mm10_v2_chr1_-_165934900_165935036	0.168253	GGCAAGA	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr1_-_74124420_74124466	0.167818	GGCAAGA	ENSMUST00000169786.1|Tns1|ENSMUSG00000055322.8|tensin 1
mm10_v2_chr6_-_83775767_83775826	0.165491	GGCAAGA	ENSMUST00000014892.6|Tex261|ENSMUSG00000014748.7|testis expressed gene 261
mm10_v2_chr7_+_25077205_25077335	0.164522	GGCAAGA	ENSMUST00000179556.1|Zfp574|ENSMUSG00000045252.10|zinc finger protein 574 	ENSMUST00000053410.9|Zfp574|ENSMUSG00000045252.10|zinc finger protein 574
mm10_v2_chrX_+_82948861_82948915	0.163259	GGCAAGA	ENSMUST00000114000.1|Dmd|ENSMUSG00000045103.11|dystrophin, muscular dystrophy
mm10_v2_chr6_-_3763618_3763629	0.161369	GGCAAGA	ENSMUST00000171613.1|Calcr|ENSMUSG00000023964.9|calcitonin receptor
mm10_v2_chr9_+_103112072_103112093	0.160408	GGCAAGA	ENSMUST00000035155.6|Rab6b|ENSMUSG00000032549.6|RAB6B, member RAS oncogene family
mm10_v2_chr6_+_8948608_8948619	0.159332	GGCAAGA	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr3_+_58576636_58576717	0.159196	GGCAAGA	ENSMUST00000107924.1|Selt|ENSMUSG00000075700.9|selenoprotein T
mm10_v2_chr13_+_54071815_54071859	0.15696	GGCAAGA	ENSMUST00000021930.8|Sfxn1|ENSMUSG00000021474.8|sideroflexin 1
mm10_v2_chr4_-_20778527_20778593	0.156735	GGCAAGA	ENSMUST00000119374.1|Nkain3|ENSMUSG00000055761.8|Na+/K+ transporting ATPase interacting 3
mm10_v2_chr10_-_89621253_89621275	0.156269	GGCAAGA	ENSMUST00000020102.7|Slc17a8|ENSMUSG00000019935.10|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8
mm10_v2_chr16_-_46496955_46496986	0.153768	GGCAAGA	ENSMUST00000023335.6|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3 	ENSMUST00000023334.8|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3
mm10_v2_chr2_-_125859139_125859221	0.153284	GGCAAGA	ENSMUST00000110463.1|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana) 	ENSMUST00000028635.5|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)
mm10_v2_chr7_-_137314394_137314445	0.152796	GGCAAGA	ENSMUST00000168203.1|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000106118.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000169486.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000033378.5|Ebf3|ENSMUSG00000010476.7|early B cell factor 3
mm10_v2_chr13_+_47122719_47122761	0.15036	GGCAAGA	ENSMUST00000068891.4|Rnf144b|ENSMUSG00000038068.8|ring finger protein 144B
mm10_v2_chr15_+_68928414_68928421	0.150002	GGCAAGA	ENSMUST00000022954.6|Khdrbs3|ENSMUSG00000022332.7|KH domain containing, RNA binding, signal transduction associated 3
mm10_v2_chr4_-_141723401_141723436	0.147966	GGCAAGA	ENSMUST00000102484.4|Ddi2|ENSMUSG00000078515.3|DNA-damage inducible protein 2 	ENSMUST00000177592.1|Rsc1a1|ENSMUSG00000040715.11|regulatory solute carrier protein, family 1, member 1
mm10_v2_chr16_-_23225334_23225368	0.142645	GGCAAGA	ENSMUST00000055369.4|BC106179|ENSMUSG00000045231.4|cDNA sequence BC106179
mm10_v2_chr9_+_32116040_32116136	0.141152	GGCAAGA	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr4_-_14826582_14826589	0.137657	GGCAAGA	ENSMUST00000117268.1|Otud6b|ENSMUSG00000040550.10|OTU domain containing 6B
mm10_v2_chr1_+_162570687_162570837	0.134478	GGCAAGA	ENSMUST00000050010.4|Vamp4|ENSMUSG00000026696.9|vesicle-associated membrane protein 4 	ENSMUST00000150040.1|Vamp4|ENSMUSG00000026696.9|vesicle-associated membrane protein 4
mm10_v2_chr6_-_13608011_13608100	0.130179	GGCAAGA	ENSMUST00000031554.2|Tmem168|ENSMUSG00000029569.3|transmembrane protein 168
mm10_v2_chr19_-_3575708_3575756	0.129561	GGCAAGA	ENSMUST00000113997.2|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000025846.8|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000172362.1|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3
mm10_v2_chr17_-_26508463_26508519	0.128535	GGCAAGA	ENSMUST00000025025.6|Dusp1|ENSMUSG00000024190.6|dual specificity phosphatase 1
mm10_v2_chr12_+_111538101_111538243	0.128139	GGCAAGA	ENSMUST00000166123.1|Eif5|ENSMUSG00000021282.10|eukaryotic translation initiation factor 5
mm10_v2_chr12_-_98901478_98901492	0.127725	GGCAAGA	ENSMUST00000065716.6|Eml5|ENSMUSG00000051166.9|echinoderm microtubule associated protein like 5
mm10_v2_chr10_-_61452658_61452813	0.125441	GGCAAGA	ENSMUST00000167087.1|Eif4ebp2|ENSMUSG00000020091.8|eukaryotic translation initiation factor 4E binding protein 2 	ENSMUST00000020288.7|Eif4ebp2|ENSMUSG00000020091.8|eukaryotic translation initiation factor 4E binding protein 2
mm10_v2_chr1_+_194619815_194619833	0.12205	GGCAAGA	ENSMUST00000027952.5|Plxna2|ENSMUSG00000026640.6|plexin A2
mm10_v2_chr14_+_26579535_26579612	0.122025	GGCAAGA	ENSMUST00000037585.7|Dennd6a|ENSMUSG00000040818.7|DENN/MADD domain containing 6A
mm10_v2_chr2_+_22622183_22622205	0.1199	GGCAAGA	ENSMUST00000028123.3|Gad2|ENSMUSG00000026787.3|glutamic acid decarboxylase 2
mm10_v2_chr7_-_134938264_134938430	0.119073	GGCAAGA	ENSMUST00000171394.1|Fam196a|ENSMUSG00000073805.4|family with sequence similarity 196, member A
mm10_v2_chr13_+_37826225_37826315	0.113061	GGCAAGA	ENSMUST00000128570.1|Rreb1|ENSMUSG00000039087.10|ras responsive element binding protein 1
mm10_v2_chr4_-_133633419_133633525	0.112698	GGCAAGA	ENSMUST00000084238.4|Zdhhc18|ENSMUSG00000037553.8|zinc finger, DHHC domain containing 18
mm10_v2_chr2_-_33371400_33371484	0.110978	GGCAAGA	ENSMUST00000113164.1|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1 	ENSMUST00000091039.2|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1 	ENSMUST00000042615.6|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1
mm10_v2_chr4_+_116720920_116721004	0.110856	GGCAAGA	ENSMUST00000045542.6|Tesk2|ENSMUSG00000033985.11|testis-specific kinase 2 	ENSMUST00000106459.1|Tesk2|ENSMUSG00000033985.11|testis-specific kinase 2
mm10_v2_chr18_+_38250240_38250287	0.105222	GGCAAGA	ENSMUST00000025314.5|0610009O20Rik|ENSMUSG00000024442.5|RIKEN cDNA 0610009O20 gene
mm10_v2_chr17_-_79896028_79896123	0.105092	GGCAAGA	ENSMUST00000068282.5|Atl2|ENSMUSG00000059811.6|atlastin GTPase 2 	ENSMUST00000112437.1|Atl2|ENSMUSG00000059811.6|atlastin GTPase 2
mm10_v2_chr13_-_85288999_85289058	0.10495	GGCAAGA	ENSMUST00000109552.2|Rasa1|ENSMUSG00000021549.7|RAS p21 protein activator 1
mm10_v2_chr19_+_27322539_27322592	0.10483	GGCAAGA	ENSMUST00000056708.3|Kcnv2|ENSMUSG00000047298.3|potassium channel, subfamily V, member 2
mm10_v2_chr6_+_127015542_127015542	0.103831	GGCAAGA	ENSMUST00000000187.5|Fgf6|ENSMUSG00000000183.5|fibroblast growth factor 6
mm10_v2_chr3_+_103575275_103575286	0.103078	GGCAAGA	ENSMUST00000090697.4|Syt6|ENSMUSG00000027849.12|synaptotagmin VI
mm10_v2_chr10_-_78591945_78591964	0.10305	GGCAAGA	ENSMUST00000040580.6|Syde1|ENSMUSG00000032714.6|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
mm10_v2_chr11_+_75732869_75732975	0.100684	GGCAAGA	ENSMUST00000067664.3|Ywhae|ENSMUSG00000020849.7|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm10_v2_chr12_+_80644212_80644265	0.0998712	GGCAAGA	ENSMUST00000085245.5|Slc39a9|ENSMUSG00000048833.8|solute carrier family 39 (zinc transporter), member 9
mm10_v2_chr4_+_129136948_129136999	0.0982711	GGCAAGA	ENSMUST00000102600.3|Fndc5|ENSMUSG00000001334.9|fibronectin type III domain containing 5
mm10_v2_chr12_+_111039334_111039400	0.0965928	GGCAAGA	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr18_-_46525940_46525999	0.0964201	GGCAAGA	ENSMUST00000036226.5|Fem1c|ENSMUSG00000033319.5|fem-1 homolog c (C.elegans)
mm10_v2_chr3_-_94786469_94786492	0.0946352	GGCAAGA	ENSMUST00000107273.1|Cgn|ENSMUSG00000068876.8|cingulin
mm10_v2_chr7_+_134670667_134670715	0.0945354	GGCAAGA	ENSMUST00000084488.4|Dock1|ENSMUSG00000058325.5|dedicator of cytokinesis 1
mm10_v2_chr19_-_41263931_41264008	0.0918285	GGCAAGA	ENSMUST00000025989.8|Tm9sf3|ENSMUSG00000025016.10|transmembrane 9 superfamily member 3
mm10_v2_chrX_-_36645359_36645414	0.0913614	GGCAAGA	ENSMUST00000051906.6|Akap17b|ENSMUSG00000059708.6|A kinase (PRKA) anchor protein 17B
mm10_v2_chr6_+_149408973_149409038	0.0903325	GGCAAGA	ENSMUST00000086829.4|Bicd1|ENSMUSG00000003452.9|bicaudal D homolog 1 (Drosophila) 	ENSMUST00000111513.2|Bicd1|ENSMUSG00000003452.9|bicaudal D homolog 1 (Drosophila)
mm10_v2_chr11_-_120633594_120633605	0.0901103	GGCAAGA	ENSMUST00000058162.7|Mafg|ENSMUSG00000051510.7|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
mm10_v2_chr1_-_13372434_13372457	0.08801	GGCAAGA	ENSMUST00000081713.4|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr12_+_110485710_110485755	0.0879979	GGCAAGA	ENSMUST00000084985.3|Ppp2r5c|ENSMUSG00000017843.7|protein phosphatase 2, regulatory subunit B (B56), gamma isoform 	ENSMUST00000109832.1|Ppp2r5c|ENSMUSG00000017843.7|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm10_v2_chr2_-_35200923_35201120	0.0861271	GGCAAGA	ENSMUST00000028238.8|Rab14|ENSMUSG00000026878.10|RAB14, member RAS oncogene family 	ENSMUST00000113025.1|Rab14|ENSMUSG00000026878.10|RAB14, member RAS oncogene family
mm10_v2_chr5_-_92083455_92083557	0.0831993	GGCAAGA	ENSMUST00000169094.1|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2 	ENSMUST00000167918.1|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2
mm10_v2_chr13_+_80883403_80883422	0.0814003	GGCAAGA	ENSMUST00000099356.2|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr2_-_53191214_53191284	0.0779705	GGCAAGA	ENSMUST00000076313.6|Prpf40a|ENSMUSG00000061136.7|PRP40 pre-mRNA processing factor 40 homolog A (yeast) 	ENSMUST00000125243.1|Prpf40a|ENSMUSG00000061136.7|PRP40 pre-mRNA processing factor 40 homolog A (yeast)
mm10_v2_chr14_-_70351354_70351435	0.0771794	GGCAAGA	ENSMUST00000143153.1|Slc39a14|ENSMUSG00000022094.9|solute carrier family 39 (zinc transporter), member 14 	ENSMUST00000127000.1|Slc39a14|ENSMUSG00000022094.9|solute carrier family 39 (zinc transporter), member 14 	ENSMUST00000068044.7|Slc39a14|ENSMUSG00000022094.9|solute carrier family 39 (zinc transporter), member 14 	ENSMUST00000022688.3|Slc39a14|ENSMUSG00000022094.9|solute carrier family 39 (zinc transporter), member 14
mm10_v2_chr9_+_57589442_57589482	0.0771736	GGCAAGA	ENSMUST00000053230.6|Ulk3|ENSMUSG00000032308.8|unc-51-like kinase 3
mm10_v2_chr5_-_66618772_66618828	0.0764247	GGCAAGA	ENSMUST00000162994.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159512.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159786.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2
mm10_v2_chrX_-_165327376_165327421	0.0760884	GGCAAGA	ENSMUST00000058787.8|Glra2|ENSMUSG00000018589.8|glycine receptor, alpha 2 subunit
mm10_v2_chr19_-_58794436_58794461	0.072505	GGCAAGA	ENSMUST00000028299.4|1700019N19Rik|ENSMUSG00000026931.4|RIKEN cDNA 1700019N19 gene
mm10_v2_chr7_-_63938862_63938933	0.0712656	GGCAAGA	ENSMUST00000063694.8|Klf13|ENSMUSG00000052040.9|Kruppel-like factor 13
mm10_v2_chr12_-_80112998_80113019	0.0692437	GGCAAGA	ENSMUST00000165114.1|Zfp36l1|ENSMUSG00000021127.6|zinc finger protein 36, C3H type-like 1 	ENSMUST00000021552.1|Zfp36l1|ENSMUSG00000021127.6|zinc finger protein 36, C3H type-like 1
mm10_v2_chr9_-_75611308_75611334	0.0655596	GGCAAGA	ENSMUST00000064433.3|Tmod2|ENSMUSG00000032186.8|tropomodulin 2
mm10_v2_chr9_-_52679429_52679429	0.0633211	GGCAAGA	ENSMUST00000098768.2|AI593442|ENSMUSG00000078307.2|expressed sequence AI593442
mm10_v2_chr11_-_22982090_22982382	0.0630471	GGCAAGA	ENSMUST00000160826.1|RP23-242C19.7|ENSMUSG00000098650.1|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3gnt2), transcript variant 2, mRNA 	ENSMUST00000093270.5|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000071068.8|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000159081.1|Commd1|ENSMUSG00000051355.12|COMM domain containing 1
mm10_v2_chr12_-_54203860_54203887	0.0628597	GGCAAGA	ENSMUST00000039516.3|Egln3|ENSMUSG00000035105.5|EGL nine homolog 3 (C. elegans)
mm10_v2_chr17_-_47688028_47688183	0.062377	GGCAAGA	ENSMUST00000113301.1|Tomm6|ENSMUSG00000033475.9|translocase of outer mitochondrial membrane 6 homolog (yeast) 	ENSMUST00000113302.3|Tomm6|ENSMUSG00000033475.9|translocase of outer mitochondrial membrane 6 homolog (yeast)
mm10_v2_chr10_+_86300372_86300372	0.061587	GGCAAGA	ENSMUST00000020234.7|Timp3|ENSMUSG00000020044.7|tissue inhibitor of metalloproteinase 3
mm10_v2_chr19_+_4510472_4510487	0.0592143	GGCAAGA	ENSMUST00000068004.6|Pcx|ENSMUSG00000024892.9|pyruvate carboxylase
mm10_v2_chr7_-_35754394_35754454	0.0580437	GGCAAGA	ENSMUST00000051377.8|Dpy19l3|ENSMUSG00000043671.8|dpy-19-like 3 (C. elegans)
mm10_v2_chr15_+_44428073_44428174	0.0575977	GGCAAGA	ENSMUST00000060652.3|Eny2|ENSMUSG00000022338.6|enhancer of yellow 2 homolog (Drosophila)
mm10_v2_chr5_-_149636331_149636376	0.0575699	GGCAAGA	ENSMUST00000074846.7|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000110498.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000127977.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000132412.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1
mm10_v2_chr18_+_64887690_64887762	0.0569708	GGCAAGA	ENSMUST00000163516.1|Nedd4l|ENSMUSG00000024589.9|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm10_v2_chr16_+_16896469_16896598	0.0567902	GGCAAGA	ENSMUST00000027373.9|Ppm1f|ENSMUSG00000026181.11|protein phosphatase 1F (PP2C domain containing)
mm10_v2_chr14_-_57746044_57746144	0.0525535	GGCAAGA	ENSMUST00000173990.1|Lats2|ENSMUSG00000021959.9|large tumor suppressor 2 	ENSMUST00000022531.7|Lats2|ENSMUSG00000021959.9|large tumor suppressor 2
mm10_v2_chr10_+_69212634_69212667	0.0497336	GGCAAGA	ENSMUST00000020101.5|Rhobtb1|ENSMUSG00000019944.8|Rho-related BTB domain containing 1
mm10_v2_chr2_-_120353094_120353143	0.0491278	GGCAAGA	ENSMUST00000028752.7|Vps39|ENSMUSG00000027291.9|vacuolar protein sorting 39 (yeast) 	ENSMUST00000102501.3|Vps39|ENSMUSG00000027291.9|vacuolar protein sorting 39 (yeast)
mm10_v2_chr12_-_85374696_85374719	0.0465372	GGCAAGA	ENSMUST00000040766.7|Tmed10|ENSMUSG00000021248.8|transmembrane emp24-like trafficking protein 10 (yeast)
mm10_v2_chr12_+_55089202_55089202	0.0461018	GGCAAGA	ENSMUST00000021407.10|Srp54a|ENSMUSG00000073079.5|signal recognition particle 54A
mm10_v2_chr15_+_30172570_30172600	0.0431042	GGCAAGA	ENSMUST00000081728.5|Ctnnd2|ENSMUSG00000022240.9|catenin (cadherin associated protein), delta 2
mm10_v2_chr5_+_65537209_65537233	0.0420915	GGCAAGA	ENSMUST00000142407.1|Ube2k|ENSMUSG00000029203.10|ubiquitin-conjugating enzyme E2K
mm10_v2_chr7_-_116443439_116443462	0.042075	GGCAAGA	ENSMUST00000170430.1|Pik3c2a|ENSMUSG00000030660.8|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm10_v2_chr11_-_120991305_120991339	0.0420153	GGCAAGA	ENSMUST00000018274.3|Csnk1d|ENSMUSG00000025162.11|casein kinase 1, delta
mm10_v2_chr12_+_110737949_110738024	0.0408256	GGCAAGA	ENSMUST00000095410.2|Wdr20a|ENSMUSG00000037957.9|WD repeat domain 20A
mm10_v2_chr1_-_151428440_151428474	0.040734	GGCAAGA	ENSMUST00000064771.5|Swt1|ENSMUSG00000052748.8|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
mm10_v2_chrX_+_152144240_152144272	0.0393778	GGCAAGA	ENSMUST00000168786.1|Iqsec2|ENSMUSG00000041115.10|IQ motif and Sec7 domain 2 	ENSMUST00000112605.1|Iqsec2|ENSMUSG00000041115.10|IQ motif and Sec7 domain 2 	ENSMUST00000112604.1|Iqsec2|ENSMUSG00000041115.10|IQ motif and Sec7 domain 2
mm10_v2_chr3_-_116662643_116662677	0.0390421	GGCAAGA	ENSMUST00000029570.5|Hiat1|ENSMUSG00000089911.1|hippocampus abundant gene transcript 1
mm10_v2_chr19_+_55316313_55316367	0.0357969	GGCAAGA	ENSMUST00000095950.2|Vti1a|ENSMUSG00000024983.9|vesicle transport through interaction with t-SNAREs 1A
mm10_v2_chr4_-_91372028_91372069	0.0353877	GGCAAGA	ENSMUST00000107110.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000008633.8|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) 	ENSMUST00000107118.1|Elavl2|ENSMUSG00000008489.12|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm10_v2_chr13_-_107890059_107890073	0.0351842	GGCAAGA	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr7_+_97579868_97579901	0.0348747	GGCAAGA	ENSMUST00000042399.7|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1 	ENSMUST00000107153.1|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1
mm10_v2_chr4_+_101419277_101419332	0.0347185	GGCAAGA	ENSMUST00000102780.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106946.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106945.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4
mm10_v2_chr12_+_55155104_55155104	0.0322351	GGCAAGA	ENSMUST00000110708.2|Srp54b|ENSMUSG00000079108.4|signal recognition particle 54B
mm10_v2_chr4_+_106911470_106911511	0.0307292	GGCAAGA	ENSMUST00000030367.8|Ssbp3|ENSMUSG00000061887.8|single-stranded DNA binding protein 3 	ENSMUST00000149926.1|Ssbp3|ENSMUSG00000061887.8|single-stranded DNA binding protein 3
mm10_v2_chr8_-_17535251_17535390	0.0282235	GGCAAGA	ENSMUST00000082104.6|Csmd1|ENSMUSG00000060924.8|CUB and Sushi multiple domains 1
mm10_v2_chr4_-_134187019_134187112	0.0226425	GGCAAGA	ENSMUST00000040271.5|Cep85|ENSMUSG00000037443.7|centrosomal protein 85
mm10_v2_chrX_+_105764262_105764279	0.0173999	GGCAAGA	ENSMUST00000033581.3|Fgf16|ENSMUSG00000031230.3|fibroblast growth factor 16
mm10_v2_chr9_-_21510181_21510203	0.0137329	GGCAAGA	ENSMUST00000034698.7|Tmed1|ENSMUSG00000032180.10|transmembrane emp24 domain containing 1
mm10_v2_chr19_+_40831248_40831292	0.0136315	GGCAAGA	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr12_+_117516479_117516534	0.0117065	GGCAAGA	ENSMUST00000109691.2|Rapgef5|ENSMUSG00000041992.8|Rap guanine nucleotide exchange factor (GEF) 5
mm10_v2_chr16_+_44139821_44139900	0.0113124	GGCAAGA	ENSMUST00000159514.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000161326.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063520.8|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063542.7|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm10_v2_chr6_+_39381175_39381175	0.009596	GGCAAGA	ENSMUST00000031986.4|Rab19|ENSMUSG00000029923.4|RAB19, member RAS oncogene family
mm10_v2_chr9_-_119322421_119322449	0.00936748	GGCAAGA	ENSMUST00000040853.4|Oxsr1|ENSMUSG00000036737.6|oxidative-stress responsive 1
mm10_v2_chr11_+_75531690_75531743	0.00911115	GGCAAGA	ENSMUST00000149727.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000042561.7|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000108433.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2 	ENSMUST00000143035.1|Slc43a2|ENSMUSG00000038178.10|solute carrier family 43, member 2
mm10_v2_chr4_+_120854786_120854843	0.00821515	GGCAAGA	ENSMUST00000071093.2|Rims3|ENSMUSG00000032890.11|regulating synaptic membrane exocytosis 3
mm10_v2_chr1_+_60746358_60746427	0.00528591	GGCAAGA	ENSMUST00000027165.2|Cd28|ENSMUSG00000026012.2|CD28 antigen
mm10_v2_chr11_+_80300866_80300912	0.00486404	GGCAAGA	ENSMUST00000017836.7|Rhbdl3|ENSMUSG00000017692.8|rhomboid, veinlet-like 3 (Drosophila)
mm10_v2_chr9_-_27030010_27030114	0.00266763	GGCAAGA	ENSMUST00000034470.9|Vps26b|ENSMUSG00000031988.9|vacuolar protein sorting 26 homolog B (yeast)
mm10_v2_chr12_+_101975965_101976004	0.00153416	GGCAAGA	ENSMUST00000047357.8|Cpsf2|ENSMUSG00000041781.8|cleavage and polyadenylation specific factor 2
mm10_v2_chr10_+_50895651_50895651	0.00032551	GGCAAGA	ENSMUST00000020071.3|Sim1|ENSMUSG00000019913.3|single-minded homolog 1 (Drosophila)
