mm10_v2_chr16_+_32608920_32608964	0.786588	GGAAGAC	ENSMUST00000023486.8|Tfrc|ENSMUSG00000022797.9|transferrin receptor
mm10_v2_chrX_-_70365052_70365112	0.548286	GGAAGAC	ENSMUST00000101509.2|Ids|ENSMUSG00000035847.9|iduronate 2-sulfatase
mm10_v2_chr15_+_41789495_41789527	0.478816	GGAAGAC	ENSMUST00000090095.5|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1 	ENSMUST00000022918.7|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr19_+_38930909_38930920	0.410356	GGAAGAC	ENSMUST00000025965.5|Hells|ENSMUSG00000025001.5|helicase, lymphoid specific
mm10_v2_chr7_+_110018301_110018425	0.393736	GGAAGAC	ENSMUST00000084731.3|Ipo7|ENSMUSG00000066232.3|importin 7
mm10_v2_chr3_-_116614587_116614587	0.373053	GGAAGAC	ENSMUST00000041524.4|Trmt13|ENSMUSG00000033439.6|tRNA methyltransferase 13
mm10_v2_chr3_+_41555723_41555745	0.34612	GGAAGAC	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr12_+_76370266_76370266	0.3387	GGAAGAC	ENSMUST00000042779.3|Zbtb1|ENSMUSG00000033454.6|zinc finger and BTB domain containing 1
mm10_v2_chr12_-_51691883_51691925	0.324487	GGAAGAC	ENSMUST00000013130.8|Strn3|ENSMUSG00000020954.9|striatin, calmodulin binding protein 3 	ENSMUST00000169503.1|Strn3|ENSMUSG00000020954.9|striatin, calmodulin binding protein 3
mm10_v2_chr14_+_14012491_14012693	0.322197	GGAAGAC	ENSMUST00000022257.2|Atxn7|ENSMUSG00000021738.4|ataxin 7
mm10_v2_chr9_-_72111827_72111895	0.321576	GGAAGAC	ENSMUST00000183404.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184783.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr2_-_126876209_126876267	0.320457	GGAAGAC	ENSMUST00000103224.3|Trpm7|ENSMUSG00000027365.8|transient receptor potential cation channel, subfamily M, member 7
mm10_v2_chr17_-_66077022_66077081	0.305902	GGAAGAC	ENSMUST00000150766.1|Ankrd12|ENSMUSG00000034647.8|ankyrin repeat domain 12 	ENSMUST00000038116.5|Ankrd12|ENSMUSG00000034647.8|ankyrin repeat domain 12
mm10_v2_chr2_-_142901506_142901576	0.285977	GGAAGAC	ENSMUST00000043589.7|Kif16b|ENSMUSG00000038844.8|kinesin family member 16B
mm10_v2_chr6_+_86078070_86078089	0.261854	GGAAGAC	ENSMUST00000032069.5|Add2|ENSMUSG00000030000.8|adducin 2 (beta)
mm10_v2_chr4_+_49632046_49632110	0.261417	GGAAGAC	ENSMUST00000156314.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000167496.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000029989.4|Rnf20|ENSMUSG00000028309.8|ring finger protein 20 	ENSMUST00000146547.1|Rnf20|ENSMUSG00000028309.8|ring finger protein 20
mm10_v2_chr6_-_60829826_60829855	0.254182	GGAAGAC	ENSMUST00000163779.1|Snca|ENSMUSG00000025889.7|synuclein, alpha
mm10_v2_chr12_+_71015966_71016063	0.251188	GGAAGAC	ENSMUST00000046305.5|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr13_+_109903089_109903110	0.243018	GGAAGAC	ENSMUST00000120664.1|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chr3_+_103914560_103914605	0.24297	GGAAGAC	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr4_-_15149051_15149131	0.242502	GGAAGAC	ENSMUST00000041606.7|Necab1|ENSMUSG00000040536.9|N-terminal EF-hand calcium binding protein 1
mm10_v2_chr14_-_70766598_70766644	0.240007	GGAAGAC	ENSMUST00000167242.1|Xpo7|ENSMUSG00000022100.7|exportin 7 	ENSMUST00000022696.6|Xpo7|ENSMUSG00000022100.7|exportin 7
mm10_v2_chr2_-_66124994_66125143	0.231742	GGAAGAC	ENSMUST00000028378.3|Galnt3|ENSMUSG00000026994.3|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3
mm10_v2_chr13_+_45507438_45507515	0.228078	GGAAGAC	ENSMUST00000000260.6|Gmpr|ENSMUSG00000000253.6|guanosine monophosphate reductase
mm10_v2_chr2_+_75832168_75832194	0.225047	GGAAGAC	ENSMUST00000047232.7|Agps|ENSMUSG00000042410.9|alkylglycerone phosphate synthase 	ENSMUST00000111952.2|Agps|ENSMUSG00000042410.9|alkylglycerone phosphate synthase
mm10_v2_chr10_-_62486772_62486805	0.222741	GGAAGAC	ENSMUST00000105447.3|Vps26a|ENSMUSG00000020078.9|vacuolar protein sorting 26 homolog A (yeast)
mm10_v2_chr5_+_124439891_124439991	0.219868	GGAAGAC	ENSMUST00000059580.4|Setd8|ENSMUSG00000049327.11|SET domain containing (lysine methyltransferase) 8
mm10_v2_chr5_-_20951769_20951824	0.218523	GGAAGAC	ENSMUST00000036489.5|Rsbn1l|ENSMUSG00000039968.5|round spermatid basic protein 1-like
mm10_v2_chr12_+_84451485_84451518	0.218501	GGAAGAC	ENSMUST00000137170.1|Lin52|ENSMUSG00000085793.1|lin-52 homolog (C. elegans)
mm10_v2_chr9_-_95511897_95511996	0.210573	GGAAGAC	ENSMUST00000079659.5|U2surp|ENSMUSG00000032407.7|U2 snRNP-associated SURP domain containing 	ENSMUST00000078374.6|U2surp|ENSMUSG00000032407.7|U2 snRNP-associated SURP domain containing
mm10_v2_chr18_+_34777008_34777075	0.201289	GGAAGAC	ENSMUST00000043775.7|Kdm3b|ENSMUSG00000038773.10|KDM3B lysine (K)-specific demethylase 3B
mm10_v2_chr4_-_19708922_19709004	0.198056	GGAAGAC	ENSMUST00000108246.2|Wwp1|ENSMUSG00000041058.9|WW domain containing E3 ubiquitin protein ligase 1
mm10_v2_chr19_-_37330613_37330613	0.196689	GGAAGAC	ENSMUST00000131070.1|Ide|ENSMUSG00000056999.8|insulin degrading enzyme
mm10_v2_chr14_+_34673888_34673930	0.195769	GGAAGAC	ENSMUST00000048263.7|Wapal|ENSMUSG00000041408.10|wings apart-like homolog (Drosophila)
mm10_v2_chr19_+_8819401_8819401	0.193259	GGAAGAC	ENSMUST00000096753.3|Hnrnpul2|ENSMUSG00000071659.3|heterogeneous nuclear ribonucleoprotein U-like 2
mm10_v2_chr12_+_95692212_95692246	0.190314	GGAAGAC	ENSMUST00000057324.3|Flrt2|ENSMUSG00000047414.6|fibronectin leucine rich transmembrane protein 2
mm10_v2_chr7_-_47008397_47008421	0.189705	GGAAGAC	ENSMUST00000061639.7|Spty2d1|ENSMUSG00000049516.7|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
mm10_v2_chr2_-_60963192_60963251	0.18817	GGAAGAC	ENSMUST00000028347.6|Rbms1|ENSMUSG00000026970.10|RNA binding motif, single stranded interacting protein 1
mm10_v2_chr8_+_13869641_13869740	0.185823	GGAAGAC	ENSMUST00000051870.7|Champ1|ENSMUSG00000047710.7|chromosome alignment maintaining phosphoprotein 1 	ENSMUST00000128557.1|Champ1|ENSMUSG00000047710.7|chromosome alignment maintaining phosphoprotein 1
mm10_v2_chr9_-_96752822_96752869	0.180671	GGAAGAC	ENSMUST00000152594.1|Zbtb38|ENSMUSG00000040433.10|zinc finger and BTB domain containing 38
mm10_v2_chr13_+_81783220_81783307	0.170975	GGAAGAC	ENSMUST00000022009.8|Cetn3|ENSMUSG00000021537.8|centrin 3
mm10_v2_chr1_+_180568913_180568960	0.170416	GGAAGAC	ENSMUST00000027777.6|Parp1|ENSMUSG00000026496.6|poly (ADP-ribose) polymerase family, member 1
mm10_v2_chr19_-_12796108_12796146	0.164403	GGAAGAC	ENSMUST00000038627.8|Zfp91|ENSMUSG00000024695.9|zinc finger protein 91
mm10_v2_chr16_+_44173239_44173270	0.161336	GGAAGAC	ENSMUST00000119746.1|Gm608|ENSMUSG00000068284.8|predicted gene 608
mm10_v2_chr11_-_44470464_44470513	0.157733	GGAAGAC	ENSMUST00000102795.3|Ublcp1|ENSMUSG00000041231.9|ubiquitin-like domain containing CTD phosphatase 1
mm10_v2_chr18_+_59175333_59175406	0.155593	GGAAGAC	ENSMUST00000080721.4|Chsy3|ENSMUSG00000058152.7|chondroitin sulfate synthase 3
mm10_v2_chr3_+_138526174_138526191	0.154901	GGAAGAC	ENSMUST00000029803.7|Eif4e|ENSMUSG00000028156.8|eukaryotic translation initiation factor 4E
mm10_v2_chr6_+_47454320_47454423	0.154225	GGAAGAC	ENSMUST00000031697.8|Cul1|ENSMUSG00000029686.9|cullin 1
mm10_v2_chr3_+_108591279_108591414	0.150388	GGAAGAC	ENSMUST00000051145.8|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47 	ENSMUST00000139626.1|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47
mm10_v2_chr16_+_33380765_33380787	0.148116	GGAAGAC	ENSMUST00000165418.1|Zfp148|ENSMUSG00000022811.10|zinc finger protein 148
mm10_v2_chr11_-_102697710_102697782	0.143055	GGAAGAC	ENSMUST00000164506.2|Ccdc43|ENSMUSG00000020925.10|coiled-coil domain containing 43 	ENSMUST00000092569.6|Ccdc43|ENSMUSG00000020925.10|coiled-coil domain containing 43
mm10_v2_chr6_+_8209216_8209263	0.139993	GGAAGAC	ENSMUST00000040017.7|Mios|ENSMUSG00000042447.7|missing oocyte, meiosis regulator, homolog (Drosophila)
mm10_v2_chr5_+_143622440_143622459	0.131621	GGAAGAC	ENSMUST00000116456.3|Cyth3|ENSMUSG00000018001.12|cytohesin 3
mm10_v2_chr16_-_14159232_14159286	0.131578	GGAAGAC	ENSMUST00000090300.4|Marf1|ENSMUSG00000060657.7|meiosis arrest female 1
mm10_v2_chr16_-_87432597_87432613	0.128032	GGAAGAC	ENSMUST00000039449.7|Ltn1|ENSMUSG00000052299.8|listerin E3 ubiquitin protein ligase 1
mm10_v2_chr10_-_120979327_120979373	0.125662	GGAAGAC	ENSMUST00000119944.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3 	ENSMUST00000119093.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3
mm10_v2_chr15_+_102406143_102406380	0.125237	GGAAGAC	ENSMUST00000170884.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000165924.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000163709.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000001326.6|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr9_+_113812547_113812621	0.123875	GGAAGAC	ENSMUST00000166734.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000111838.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000163895.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2
mm10_v2_chr11_-_86544754_86544805	0.123125	GGAAGAC	ENSMUST00000138810.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000058286.2|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000154617.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1
mm10_v2_chr15_-_96699698_96699717	0.122002	GGAAGAC	ENSMUST00000023099.6|Slc38a2|ENSMUSG00000022462.6|solute carrier family 38, member 2
mm10_v2_chr3_+_146404631_146404738	0.121276	GGAAGAC	ENSMUST00000106153.2|Ssx2ip|ENSMUSG00000036825.6|synovial sarcoma, X breakpoint 2 interacting protein 	ENSMUST00000039021.4|Ssx2ip|ENSMUSG00000036825.6|synovial sarcoma, X breakpoint 2 interacting protein 	ENSMUST00000106151.1|Ssx2ip|ENSMUSG00000036825.6|synovial sarcoma, X breakpoint 2 interacting protein 	ENSMUST00000149262.1|Ssx2ip|ENSMUSG00000036825.6|synovial sarcoma, X breakpoint 2 interacting protein
mm10_v2_chr3_-_144720315_144720336	0.119767	GGAAGAC	ENSMUST00000163279.1|Sh3glb1|ENSMUSG00000037062.9|SH3-domain GRB2-like B1 (endophilin)
mm10_v2_chr1_-_143776973_143777068	0.119174	GGAAGAC	ENSMUST00000159879.1|Trove2|ENSMUSG00000018199.8|TROVE domain family, member 2
mm10_v2_chr19_+_5298302_5298357	0.118083	GGAAGAC	ENSMUST00000061169.6|Gal3st3|ENSMUSG00000047658.6|galactose-3-O-sulfotransferase 3
mm10_v2_chr9_-_25151772_25151840	0.114062	GGAAGAC	ENSMUST00000008573.7|Herpud2|ENSMUSG00000008429.7|HERPUD family member 2
mm10_v2_chr4_-_55532453_55532485	0.111522	GGAAGAC	ENSMUST00000132746.1|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut) 	ENSMUST00000107619.2|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut)
mm10_v2_chr4_-_70534904_70534987	0.109991	GGAAGAC	ENSMUST00000107359.2|Megf9|ENSMUSG00000039270.3|multiple EGF-like-domains 9
mm10_v2_chr11_-_6475992_6476102	0.109907	GGAAGAC	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr9_+_72532214_72532271	0.109559	GGAAGAC	ENSMUST00000163401.2|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7 	ENSMUST00000093820.3|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7
mm10_v2_chr5_+_90903864_90903899	0.108739	GGAAGAC	ENSMUST00000075433.6|Cxcl2|ENSMUSG00000058427.7|chemokine (C-X-C motif) ligand 2
mm10_v2_chr15_+_93398344_93398464	0.103755	GGAAGAC	ENSMUST00000109256.3|Pphln1|ENSMUSG00000036167.9|periphilin 1 	ENSMUST00000068457.7|Pphln1|ENSMUSG00000036167.9|periphilin 1 	ENSMUST00000049122.8|Pphln1|ENSMUSG00000036167.9|periphilin 1 	ENSMUST00000165935.1|Pphln1|ENSMUSG00000036167.9|periphilin 1
mm10_v2_chr7_-_118243564_118243641	0.103208	GGAAGAC	ENSMUST00000179047.1|Smg1|ENSMUSG00000030655.8|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) 	ENSMUST00000032891.8|Smg1|ENSMUSG00000030655.8|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
mm10_v2_chr13_+_15463837_15463980	0.101838	GGAAGAC	ENSMUST00000110510.3|Gli3|ENSMUSG00000021318.9|GLI-Kruppel family member GLI3
mm10_v2_chr10_+_62920630_62920646	0.0920534	GGAAGAC	ENSMUST00000044977.3|Slc25a16|ENSMUSG00000071253.2|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
mm10_v2_chr3_+_34020075_34020082	0.0917867	GGAAGAC	ENSMUST00000001620.8|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog 	ENSMUST00000167354.1|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog
mm10_v2_chr11_+_75679259_75679327	0.0906044	GGAAGAC	ENSMUST00000017920.7|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108426.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108425.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000093115.3|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian)
mm10_v2_chr18_+_23954668_23954704	0.0874446	GGAAGAC	ENSMUST00000060762.4|Zfp397|ENSMUSG00000024276.6|zinc finger protein 397
mm10_v2_chr17_+_26715644_26715724	0.0858645	GGAAGAC	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr9_-_99140065_99140087	0.0855978	GGAAGAC	ENSMUST00000035037.7|Pik3cb|ENSMUSG00000032462.8|phosphatidylinositol 3-kinase, catalytic, beta polypeptide
mm10_v2_chr11_-_75796048_75796081	0.0839673	GGAAGAC	ENSMUST00000021209.7|Doc2b|ENSMUSG00000020848.7|double C2, beta
mm10_v2_chr14_+_65358661_65358691	0.0839283	GGAAGAC	ENSMUST00000066994.6|Zfp395|ENSMUSG00000034522.9|zinc finger protein 395
mm10_v2_chr5_+_88720855_88720876	0.0825933	GGAAGAC	ENSMUST00000113229.1|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B 	ENSMUST00000006424.7|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B
mm10_v2_chr1_+_60409612_60409648	0.0792681	GGAAGAC	ENSMUST00000052332.8|Abi2|ENSMUSG00000026782.9|abl-interactor 2
mm10_v2_chr5_+_146384947_146384994	0.0776917	GGAAGAC	ENSMUST00000110600.1|Wasf3|ENSMUSG00000029636.7|WAS protein family, member 3 	ENSMUST00000016143.7|Wasf3|ENSMUSG00000029636.7|WAS protein family, member 3
mm10_v2_chr1_+_131910458_131910539	0.0765654	GGAAGAC	ENSMUST00000062264.6|Nucks1|ENSMUSG00000026434.6|nuclear casein kinase and cyclin-dependent kinase substrate 1
mm10_v2_chr8_+_94601928_94602003	0.0745502	GGAAGAC	ENSMUST00000060389.8|Rspry1|ENSMUSG00000050079.9|ring finger and SPRY domain containing 1 	ENSMUST00000121101.1|Rspry1|ENSMUSG00000050079.9|ring finger and SPRY domain containing 1
mm10_v2_chr1_-_64737735_64737756	0.072799	GGAAGAC	ENSMUST00000063982.5|Fzd5|ENSMUSG00000045005.8|frizzled homolog 5 (Drosophila) 	ENSMUST00000116133.2|Fzd5|ENSMUSG00000045005.8|frizzled homolog 5 (Drosophila)
mm10_v2_chr1_-_181842334_181842401	0.0716482	GGAAGAC	ENSMUST00000005003.6|Lbr|ENSMUSG00000004880.6|lamin B receptor
mm10_v2_chr11_-_78751656_78751729	0.0709276	GGAAGAC	ENSMUST00000059468.4|Fam58b|ENSMUSG00000049489.4|family with sequence similarity 58, member B
mm10_v2_chr7_-_15999495_15999495	0.0688029	GGAAGAC	ENSMUST00000094821.3|Gltscr1|ENSMUSG00000070808.3|glioma tumor suppressor candidate region gene 1
mm10_v2_chr1_+_127774164_127774238	0.068647	GGAAGAC	ENSMUST00000027587.8|Ccnt2|ENSMUSG00000026349.8|cyclin T2 	ENSMUST00000112570.1|Ccnt2|ENSMUSG00000026349.8|cyclin T2
mm10_v2_chr8_-_80057989_80058017	0.0682526	GGAAGAC	ENSMUST00000079038.2|Hhip|ENSMUSG00000064325.3|Hedgehog-interacting protein
mm10_v2_chr14_-_105176860_105176918	0.0671144	GGAAGAC	ENSMUST00000163545.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr3_-_58525867_58525873	0.0657247	GGAAGAC	ENSMUST00000029385.7|Serp1|ENSMUSG00000027808.7|stress-associated endoplasmic reticulum protein 1
mm10_v2_chr7_+_122289297_122289347	0.0630586	GGAAGAC	ENSMUST00000064989.5|Prkcb|ENSMUSG00000052889.5|protein kinase C, beta 	ENSMUST00000064921.4|Prkcb|ENSMUSG00000052889.5|protein kinase C, beta
mm10_v2_chr11_+_22990519_22990654	0.0582429	GGAAGAC	ENSMUST00000173867.1|Cct4|ENSMUSG00000007739.4|chaperonin containing Tcp1, subunit 4 (delta) 	ENSMUST00000020562.4|Cct4|ENSMUSG00000007739.4|chaperonin containing Tcp1, subunit 4 (delta)
mm10_v2_chr7_-_110844350_110844457	0.0574871	GGAAGAC	ENSMUST00000177462.1|Rnf141|ENSMUSG00000030788.9|ring finger protein 141 	ENSMUST00000176746.1|Rnf141|ENSMUSG00000030788.9|ring finger protein 141 	ENSMUST00000177236.1|Rnf141|ENSMUSG00000030788.9|ring finger protein 141
mm10_v2_chr9_-_59486610_59486621	0.0559557	GGAAGAC	ENSMUST00000171975.1|Arih1|ENSMUSG00000025234.5|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
mm10_v2_chr17_-_51832666_51832678	0.0556271	GGAAGAC	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr6_-_42324640_42324671	0.055483	GGAAGAC	ENSMUST00000031891.8|Fam131b|ENSMUSG00000029861.11|family with sequence similarity 131, member B 	ENSMUST00000143278.1|Fam131b|ENSMUSG00000029861.11|family with sequence similarity 131, member B
mm10_v2_chr15_+_96287518_96287604	0.0541723	GGAAGAC	ENSMUST00000134985.2|Arid2|ENSMUSG00000033237.12|AT rich interactive domain 2 (ARID, RFX-like) 	ENSMUST00000096250.4|Arid2|ENSMUSG00000033237.12|AT rich interactive domain 2 (ARID, RFX-like)
mm10_v2_chr2_+_132846638_132846708	0.0540061	GGAAGAC	ENSMUST00000028835.6|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1 	ENSMUST00000110122.3|Crls1|ENSMUSG00000027357.10|cardiolipin synthase 1
mm10_v2_chr5_+_77265454_77265549	0.05314	GGAAGAC	ENSMUST00000080359.5|Rest|ENSMUSG00000029249.9|RE1-silencing transcription factor
mm10_v2_chr10_+_82699007_82699149	0.0530091	GGAAGAC	ENSMUST00000020478.7|Hcfc2|ENSMUSG00000020246.7|host cell factor C2
mm10_v2_chr16_-_22163299_22163299	0.0509141	GGAAGAC	ENSMUST00000100052.4|Igf2bp2|ENSMUSG00000033581.10|insulin-like growth factor 2 mRNA binding protein 2
mm10_v2_chr11_+_52232009_52232041	0.0472656	GGAAGAC	ENSMUST00000037324.5|Skp1a|ENSMUSG00000036309.8|S-phase kinase-associated protein 1A 	ENSMUST00000166537.1|Skp1a|ENSMUSG00000036309.8|S-phase kinase-associated protein 1A
mm10_v2_chr10_+_128303322_128303352	0.0471252	GGAAGAC	ENSMUST00000005825.6|Pan2|ENSMUSG00000005682.8|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm10_v2_chr18_+_36793918_36793937	0.0443938	GGAAGAC	ENSMUST00000001419.8|Zmat2|ENSMUSG00000001383.8|zinc finger, matrin type 2
mm10_v2_chr5_-_36748639_36748694	0.0422489	GGAAGAC	ENSMUST00000071949.3|Bloc1s4|ENSMUSG00000060708.3|biogenesis of organelles complex-1, subunit 4, cappuccino
mm10_v2_chr11_+_72607221_72607307	0.0415306	GGAAGAC	ENSMUST00000021148.6|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1 	ENSMUST00000138247.1|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1
mm10_v2_chr10_+_86021961_86021991	0.0395974	GGAAGAC	ENSMUST00000130320.1|Fbxo7|ENSMUSG00000001786.8|F-box protein 7
mm10_v2_chr2_+_131186942_131186971	0.039418	GGAAGAC	ENSMUST00000028804.8|Cdc25b|ENSMUSG00000027330.10|cell division cycle 25B 	ENSMUST00000079857.8|Cdc25b|ENSMUSG00000027330.10|cell division cycle 25B
mm10_v2_chr16_+_64851991_64851996	0.0380168	GGAAGAC	ENSMUST00000067744.7|Cggbp1|ENSMUSG00000054604.7|CGG triplet repeat binding protein 1
mm10_v2_chr3_+_68869563_68869589	0.0375874	GGAAGAC	ENSMUST00000054551.2|1110032F04Rik|ENSMUSG00000046999.2|RIKEN cDNA 1110032F04 gene
mm10_v2_chr11_-_79146407_79146422	0.035975	GGAAGAC	ENSMUST00000018478.4|Ksr1|ENSMUSG00000018334.10|kinase suppressor of ras 1 	ENSMUST00000108264.1|Ksr1|ENSMUSG00000018334.10|kinase suppressor of ras 1
mm10_v2_chrX_-_7671341_7671397	0.0347354	GGAAGAC	ENSMUST00000033486.5|Plp2|ENSMUSG00000031146.6|proteolipid protein 2
mm10_v2_chr16_+_33185045_33185153	0.0346957	GGAAGAC	ENSMUST00000039733.8|Osbpl11|ENSMUSG00000022807.8|oxysterol binding protein-like 11
mm10_v2_chr11_+_58104229_58104366	0.0346154	GGAAGAC	ENSMUST00000108843.1|Cnot8|ENSMUSG00000020515.7|CCR4-NOT transcription complex, subunit 8 	ENSMUST00000134896.1|Cnot8|ENSMUSG00000020515.7|CCR4-NOT transcription complex, subunit 8
mm10_v2_chrX_+_101640056_101640108	0.0339725	GGAAGAC	ENSMUST00000119299.1|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) 	ENSMUST00000044475.4|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm10_v2_chr18_+_70568189_70568398	0.0323994	GGAAGAC	ENSMUST00000074058.4|Mbd2|ENSMUSG00000024513.10|methyl-CpG binding domain protein 2 	ENSMUST00000114946.3|Mbd2|ENSMUSG00000024513.10|methyl-CpG binding domain protein 2
mm10_v2_chr2_+_32450444_32450462	0.0317164	GGAAGAC	ENSMUST00000048431.2|Naif1|ENSMUSG00000039164.2|nuclear apoptosis inducing factor 1
mm10_v2_chr4_-_135494615_135494628	0.0283732	GGAAGAC	ENSMUST00000102549.3|Nipal3|ENSMUSG00000028803.12|NIPA-like domain containing 3
mm10_v2_chr11_+_52360824_52360935	0.0280694	GGAAGAC	ENSMUST00000102758.1|Vdac1|ENSMUSG00000020402.5|voltage-dependent anion channel 1
mm10_v2_chr17_+_27655572_27655622	0.0276482	GGAAGAC	ENSMUST00000045896.3|Pacsin1|ENSMUSG00000040276.8|protein kinase C and casein kinase substrate in neurons 1
mm10_v2_chr15_-_98004695_98004708	0.0264252	GGAAGAC	ENSMUST00000023123.8|Col2a1|ENSMUSG00000022483.10|collagen, type II, alpha 1
mm10_v2_chr16_+_20651652_20651712	0.0263513	GGAAGAC	ENSMUST00000007212.8|Psmd2|ENSMUSG00000006998.9|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
mm10_v2_chr2_+_152226839_152226908	0.0242281	GGAAGAC	ENSMUST00000099224.3|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000124791.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000133119.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide
mm10_v2_chr1_+_58393119_58393147	0.0233348	GGAAGAC	ENSMUST00000050552.8|Bzw1|ENSMUSG00000051223.8|basic leucine zipper and W2 domains 1
mm10_v2_chr14_-_41013753_41013817	0.023136	GGAAGAC	ENSMUST00000143143.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A 	ENSMUST00000128236.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A 	ENSMUST00000022317.8|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A 	ENSMUST00000118466.1|Fam213a|ENSMUSG00000021792.9|family with sequence similarity 213, member A
mm10_v2_chr3_-_104864420_104864505	0.0222062	GGAAGAC	ENSMUST00000094028.5|Capza1|ENSMUSG00000070372.7|capping protein (actin filament) muscle Z-line, alpha 1
mm10_v2_chr11_-_22982090_22982382	0.0218602	GGAAGAC	ENSMUST00000160826.1|RP23-242C19.7|ENSMUSG00000098650.1|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3gnt2), transcript variant 2, mRNA 	ENSMUST00000093270.5|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000071068.8|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000159081.1|Commd1|ENSMUSG00000051355.12|COMM domain containing 1
mm10_v2_chr10_-_80671976_80671976	0.0217756	GGAAGAC	ENSMUST00000003433.6|Mknk2|ENSMUSG00000020190.9|MAP kinase-interacting serine/threonine kinase 2
mm10_v2_chr17_+_29490812_29490839	0.0216215	GGAAGAC	ENSMUST00000024811.6|Pim1|ENSMUSG00000024014.6|proviral integration site 1
mm10_v2_chr3_-_104961695_104961728	0.0208261	GGAAGAC	ENSMUST00000029429.4|Wnt2b|ENSMUSG00000027840.4|wingless related MMTV integration site 2b
mm10_v2_chr1_-_182019927_182019989	0.0199116	GGAAGAC	ENSMUST00000078719.6|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111030.3|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000177811.1|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111024.3|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111025.2|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila)
mm10_v2_chr10_-_62880014_62880014	0.0189045	GGAAGAC	ENSMUST00000050826.7|Tet1|ENSMUSG00000047146.9|tet methylcytosine dioxygenase 1
mm10_v2_chr10_-_81025406_81025411	0.0185581	GGAAGAC	ENSMUST00000055125.4|Diras1|ENSMUSG00000043670.4|DIRAS family, GTP-binding RAS-like 1
mm10_v2_chr14_-_98169542_98169595	0.0183198	GGAAGAC	ENSMUST00000069334.7|Dach1|ENSMUSG00000055639.10|dachshund 1 (Drosophila) 	ENSMUST00000071533.6|Dach1|ENSMUSG00000055639.10|dachshund 1 (Drosophila)
mm10_v2_chr9_-_77544870_77544914	0.0180517	GGAAGAC	ENSMUST00000183873.1|Lrrc1|ENSMUSG00000032352.9|leucine rich repeat containing 1
mm10_v2_chr2_-_33468493_33468572	0.0174808	GGAAGAC	ENSMUST00000113156.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000028125.5|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000126442.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43
mm10_v2_chr6_+_86849488_86849628	0.0171416	GGAAGAC	ENSMUST00000089519.6|Aak1|ENSMUSG00000057230.7|AP2 associated kinase 1 	ENSMUST00000113668.1|Aak1|ENSMUSG00000057230.7|AP2 associated kinase 1
mm10_v2_chr14_-_65098031_65098106	0.0166971	GGAAGAC	ENSMUST00000022550.7|Extl3|ENSMUSG00000021978.8|exostoses (multiple)-like 3
mm10_v2_chr1_+_176814660_176814660	0.0155347	GGAAGAC	ENSMUST00000056773.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8 	ENSMUST00000027785.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8
mm10_v2_chr16_+_37868383_37868481	0.0155222	GGAAGAC	ENSMUST00000078717.6|Lrrc58|ENSMUSG00000034158.9|leucine rich repeat containing 58
mm10_v2_chr18_+_34758890_34758906	0.0145687	GGAAGAC	ENSMUST00000049281.5|Fam53c|ENSMUSG00000034300.10|family with sequence similarity 53, member C
mm10_v2_chr6_-_119330668_119330694	0.0139558	GGAAGAC	ENSMUST00000112756.1|Lrtm2|ENSMUSG00000055003.8|leucine-rich repeats and transmembrane domains 2
mm10_v2_chr18_+_11052487_11052510	0.0138395	GGAAGAC	ENSMUST00000047762.7|Gata6|ENSMUSG00000005836.8|GATA binding protein 6
mm10_v2_chr9_+_45117813_45117881	0.0114384	GGAAGAC	ENSMUST00000170998.1|Scn2b|ENSMUSG00000070304.5|sodium channel, voltage-gated, type II, beta 	ENSMUST00000093855.3|Scn2b|ENSMUSG00000070304.5|sodium channel, voltage-gated, type II, beta
mm10_v2_chr4_-_119492563_119492628	0.00903271	GGAAGAC	ENSMUST00000049994.7|Rimkla|ENSMUSG00000048899.8|ribosomal modification protein rimK-like family member A
mm10_v2_chr10_-_4388037_4388108	0.00875251	GGAAGAC	ENSMUST00000100078.2|Zbtb2|ENSMUSG00000075327.3|zinc finger and BTB domain containing 2
mm10_v2_chr4_-_56947411_56947447	0.00848878	GGAAGAC	ENSMUST00000107609.3|Tmem245|ENSMUSG00000055296.8|transmembrane protein 245 	ENSMUST00000068792.6|Tmem245|ENSMUSG00000055296.8|transmembrane protein 245
mm10_v2_chr6_+_96113146_96113170	0.00740003	GGAAGAC	ENSMUST00000122120.1|Fam19a1|ENSMUSG00000059187.6|family with sequence similarity 19, member A1
mm10_v2_chr7_-_45366714_45366840	0.0073534	GGAAGAC	ENSMUST00000107779.1|Ppfia3|ENSMUSG00000003863.10|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
mm10_v2_chr2_-_34372004_34372044	0.00720337	GGAAGAC	ENSMUST00000113132.2|Pbx3|ENSMUSG00000038718.9|pre B cell leukemia homeobox 3 	ENSMUST00000040638.8|Pbx3|ENSMUSG00000038718.9|pre B cell leukemia homeobox 3
mm10_v2_chr11_-_102185202_102185238	0.00638725	GGAAGAC	ENSMUST00000107156.2|Lsm12|ENSMUSG00000020922.5|LSM12 homolog (S. cerevisiae)
mm10_v2_chr5_-_30907692_30907788	0.00563957	GGAAGAC	ENSMUST00000132034.2|Ost4|ENSMUSG00000038803.5|oligosaccharyltransferase 4 homolog (S. cerevisiae) 	ENSMUST00000132253.2|Ost4|ENSMUSG00000038803.5|oligosaccharyltransferase 4 homolog (S. cerevisiae)
mm10_v2_chr15_-_73423180_73423218	0.00514309	GGAAGAC	ENSMUST00000110036.2|Ptk2|ENSMUSG00000022607.8|PTK2 protein tyrosine kinase 2 	ENSMUST00000170939.1|Ptk2|ENSMUSG00000022607.8|PTK2 protein tyrosine kinase 2
mm10_v2_chr18_+_69345721_69345811	0.00504909	GGAAGAC	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr2_+_6322621_6322667	0.00480391	GGAAGAC	ENSMUST00000114937.1|Usp6nl|ENSMUSG00000039046.9|USP6 N-terminal like
mm10_v2_chr11_+_94629741_94629834	0.00202041	GGAAGAC	ENSMUST00000021239.6|Lrrc59|ENSMUSG00000020869.8|leucine rich repeat containing 59
mm10_v2_chr3_+_88553716_88553806	0.00188292	GGAAGAC	ENSMUST00000008748.6|Ubqln4|ENSMUSG00000008604.6|ubiquilin 4
mm10_v2_chr13_+_37826225_37826315	0.000862971	GGAAGAC	ENSMUST00000128570.1|Rreb1|ENSMUSG00000039087.10|ras responsive element binding protein 1
mm10_v2_chr11_-_118909487_118909575	0.000528318	GGAAGAC	ENSMUST00000117731.1|Rbfox3|ENSMUSG00000025576.11|RNA binding protein, fox-1 homolog (C. elegans) 3 	ENSMUST00000106278.2|Rbfox3|ENSMUSG00000025576.11|RNA binding protein, fox-1 homolog (C. elegans) 3 	ENSMUST00000120061.1|Rbfox3|ENSMUSG00000025576.11|RNA binding protein, fox-1 homolog (C. elegans) 3 	ENSMUST00000017576.4|Rbfox3|ENSMUSG00000025576.11|RNA binding protein, fox-1 homolog (C. elegans) 3
mm10_v2_chr17_-_74294834_74294883	0.000341223	GGAAGAC	ENSMUST00000078459.6|Memo1|ENSMUSG00000058704.7|mediator of cell motility 1
