mm10_v2_chr10_-_109010955_109010983	0.218616	GAGAACU	ENSMUST00000105276.1|Syt1|ENSMUSG00000035864.8|synaptotagmin I 	ENSMUST00000064054.7|Syt1|ENSMUSG00000035864.8|synaptotagmin I
mm10_v2_chr10_+_107271827_107271850	0.0972894	GAGAACU	ENSMUST00000020057.8|Lin7a|ENSMUSG00000019906.8|lin-7 homolog A (C. elegans) 	ENSMUST00000105280.3|Lin7a|ENSMUSG00000019906.8|lin-7 homolog A (C. elegans)
mm10_v2_chr7_-_38227975_38228000	0.0752865	GAGAACU	ENSMUST00000098513.4|Plekhf1|ENSMUSG00000074170.4|pleckstrin homology domain containing, family F (with FYVE domain) member 1
mm10_v2_chr1_-_15892657_15892729	0.0737454	GAGAACU	ENSMUST00000040695.4|Sbspon|ENSMUSG00000032719.4|somatomedin B and thrombospondin, type 1 domain containing
mm10_v2_chr1_-_170976112_170976127	0.0722064	GAGAACU	ENSMUST00000027966.7|Fcgr2b|ENSMUSG00000026656.9|Fc receptor, IgG, low affinity IIb 	ENSMUST00000081103.5|Fcgr2b|ENSMUSG00000026656.9|Fc receptor, IgG, low affinity IIb 	ENSMUST00000159688.1|Fcgr2b|ENSMUSG00000026656.9|Fc receptor, IgG, low affinity IIb
mm10_v2_chr17_-_12507704_12507727	0.068174	GAGAACU	ENSMUST00000024595.2|Slc22a3|ENSMUSG00000023828.2|solute carrier family 22 (organic cation transporter), member 3
mm10_v2_chr15_+_55112317_55112346	0.0597002	GAGAACU	ENSMUST00000096433.3|Deptor|ENSMUSG00000022419.9|DEP domain containing MTOR-interacting protein
mm10_v2_chr7_-_7299492_7299540	0.0543595	GAGAACU	ENSMUST00000000619.6|Clcn4-2|ENSMUSG00000000605.8|chloride channel 4-2
mm10_v2_chr19_+_4231899_4231928	0.0434415	GAGAACU	ENSMUST00000025773.3|Pold4|ENSMUSG00000024854.3|polymerase (DNA-directed), delta 4
mm10_v2_chr7_-_19796789_19796829	0.0433699	GAGAACU	ENSMUST00000108449.2|Cblc|ENSMUSG00000040525.7|Casitas B-lineage lymphoma c 	ENSMUST00000043822.7|Cblc|ENSMUSG00000040525.7|Casitas B-lineage lymphoma c
mm10_v2_chr2_+_15055274_15055379	0.0401954	GAGAACU	ENSMUST00000069870.3|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chr4_+_131921771_131921771	0.039042	GAGAACU	ENSMUST00000094666.3|Tmem200b|ENSMUSG00000070720.3|transmembrane protein 200B
mm10_v2_chr3_-_58692391_58692412	0.0390009	GAGAACU	ENSMUST00000070368.7|Siah2|ENSMUSG00000036432.8|seven in absentia 2
mm10_v2_chr2_+_101678403_101678469	0.0379199	GAGAACU	ENSMUST00000004949.7|Traf6|ENSMUSG00000027164.8|TNF receptor-associated factor 6
mm10_v2_chr10_-_86498836_86498858	0.0370827	GAGAACU	ENSMUST00000120638.1|Syn3|ENSMUSG00000059602.8|synapsin III
mm10_v2_chr2_+_163547148_163547188	0.0361677	GAGAACU	ENSMUST00000109411.1|Hnf4a|ENSMUSG00000017950.10|hepatic nuclear factor 4, alpha 	ENSMUST00000018094.6|Hnf4a|ENSMUSG00000017950.10|hepatic nuclear factor 4, alpha
mm10_v2_chr11_-_23770953_23771028	0.0339088	GAGAACU	ENSMUST00000102864.3|Rel|ENSMUSG00000020275.8|reticuloendotheliosis oncogene
mm10_v2_chr2_+_33216051_33216084	0.0336715	GAGAACU	ENSMUST00000004208.5|Angptl2|ENSMUSG00000004105.6|angiopoietin-like 2
mm10_v2_chr19_-_34527396_34527481	0.0304532	GAGAACU	ENSMUST00000049572.8|Lipa|ENSMUSG00000024781.9|lysosomal acid lipase A 	ENSMUST00000178114.1|Lipa|ENSMUSG00000024781.9|lysosomal acid lipase A
mm10_v2_chr7_-_34654342_34654398	0.0293268	GAGAACU	ENSMUST00000108069.1|Kctd15|ENSMUSG00000030499.3|potassium channel tetramerisation domain containing 15
mm10_v2_chr15_-_53902472_53902530	0.0286011	GAGAACU	ENSMUST00000078673.6|Samd12|ENSMUSG00000058656.6|sterile alpha motif domain containing 12
mm10_v2_chrX_+_98149666_98149721	0.0285892	GAGAACU	ENSMUST00000052837.7|Ar|ENSMUSG00000046532.7|androgen receptor
mm10_v2_chr11_+_72607221_72607307	0.0285839	GAGAACU	ENSMUST00000021148.6|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1 	ENSMUST00000138247.1|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1
mm10_v2_chr11_-_5542177_5542219	0.0282847	GAGAACU	ENSMUST00000020776.4|Ccdc117|ENSMUSG00000020482.4|coiled-coil domain containing 117
mm10_v2_chr6_+_147091379_147091528	0.0217528	GAGAACU	ENSMUST00000036003.7|Klhl42|ENSMUSG00000040102.9|kelch-like 42
mm10_v2_chr1_-_16519284_16519336	0.0216196	GAGAACU	ENSMUST00000162751.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000027052.6|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000149320.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr18_+_11839220_11839475	0.0201216	GAGAACU	ENSMUST00000171109.1|Cables1|ENSMUSG00000040957.8|CDK5 and Abl enzyme substrate 1 	ENSMUST00000046948.8|Cables1|ENSMUSG00000040957.8|CDK5 and Abl enzyme substrate 1
mm10_v2_chr12_-_83921899_83921934	0.0196341	GAGAACU	ENSMUST00000117217.1|Numb|ENSMUSG00000021224.8|numb gene homolog (Drosophila)
mm10_v2_chr14_-_16575456_16575501	0.0192372	GAGAACU	ENSMUST00000063750.6|Rarb|ENSMUSG00000017491.8|retinoic acid receptor, beta
mm10_v2_chr16_+_72663143_72663189	0.0191971	GAGAACU	ENSMUST00000023600.7|Robo1|ENSMUSG00000022883.10|roundabout homolog 1 (Drosophila)
mm10_v2_chr12_-_111377705_111377719	0.0190035	GAGAACU	ENSMUST00000041965.3|Cdc42bpb|ENSMUSG00000021279.4|CDC42 binding protein kinase beta
mm10_v2_chr11_-_76763550_76763582	0.018423	GAGAACU	ENSMUST00000010536.8|Gosr1|ENSMUSG00000010392.8|golgi SNAP receptor complex member 1
mm10_v2_chr16_-_56886131_56886176	0.0178618	GAGAACU	ENSMUST00000023435.5|Tmem45a|ENSMUSG00000022754.5|transmembrane protein 45a
mm10_v2_chr18_+_38250240_38250287	0.0174536	GAGAACU	ENSMUST00000025314.5|0610009O20Rik|ENSMUSG00000024442.5|RIKEN cDNA 0610009O20 gene
mm10_v2_chr7_-_66388286_66388350	0.0169076	GAGAACU	ENSMUST00000015277.7|Lrrk1|ENSMUSG00000015133.10|leucine-rich repeat kinase 1
mm10_v2_chr7_+_112023469_112023566	0.0163234	GAGAACU	ENSMUST00000106653.2|Usp47|ENSMUSG00000059263.7|ubiquitin specific peptidase 47
mm10_v2_chr13_+_63014934_63014934	0.015921	GAGAACU	ENSMUST00000091560.4|2010111I01Rik|ENSMUSG00000021458.10|RIKEN cDNA 2010111I01 gene
mm10_v2_chr2_-_26503814_26503836	0.0159077	GAGAACU	ENSMUST00000028288.4|Notch1|ENSMUSG00000026923.9|notch 1
mm10_v2_chr7_+_89632689_89632731	0.015827	GAGAACU	ENSMUST00000032856.6|Me3|ENSMUSG00000030621.11|malic enzyme 3, NADP(+)-dependent, mitochondrial
mm10_v2_chr12_+_85110833_85110866	0.0155479	GAGAACU	ENSMUST00000053811.8|Dlst|ENSMUSG00000004789.9|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
mm10_v2_chr2_-_30474199_30474222	0.0148946	GAGAACU	ENSMUST00000065134.2|Ier5l|ENSMUSG00000089762.2|immediate early response 5-like
mm10_v2_chr6_+_127015542_127015542	0.014052	GAGAACU	ENSMUST00000000187.5|Fgf6|ENSMUSG00000000183.5|fibroblast growth factor 6
mm10_v2_chr5_-_144358103_144358123	0.0127996	GAGAACU	ENSMUST00000055190.7|Baiap2l1|ENSMUSG00000038859.7|BAI1-associated protein 2-like 1
mm10_v2_chr6_+_113638467_113638544	0.0121321	GAGAACU	ENSMUST00000059286.7|Irak2|ENSMUSG00000060477.8|interleukin-1 receptor-associated kinase 2 	ENSMUST00000089023.4|Irak2|ENSMUSG00000060477.8|interleukin-1 receptor-associated kinase 2 	ENSMUST00000089022.4|Irak2|ENSMUSG00000060477.8|interleukin-1 receptor-associated kinase 2
mm10_v2_chr1_+_178798438_178798467	0.0116539	GAGAACU	ENSMUST00000160789.1|Kif26b|ENSMUSG00000026494.6|kinesin family member 26B
mm10_v2_chr17_+_24470393_24470481	0.0102843	GAGAACU	ENSMUST00000053024.6|Pgp|ENSMUSG00000043445.6|phosphoglycolate phosphatase
mm10_v2_chr13_-_111490111_111490139	0.0101539	GAGAACU	ENSMUST00000047627.7|Gpbp1|ENSMUSG00000032745.11|GC-rich promoter binding protein 1
mm10_v2_chr5_-_96161990_96162097	0.0101366	GAGAACU	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr19_+_10389068_10389090	0.00972879	GAGAACU	ENSMUST00000169121.1|Syt7|ENSMUSG00000024743.8|synaptotagmin VII 	ENSMUST00000076968.3|Syt7|ENSMUSG00000024743.8|synaptotagmin VII 	ENSMUST00000073899.4|Syt7|ENSMUSG00000024743.8|synaptotagmin VII
mm10_v2_chr2_+_163994960_163994960	0.00952914	GAGAACU	ENSMUST00000018470.3|Ywhab|ENSMUSG00000018326.3|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm10_v2_chr9_-_99568849_99568911	0.00808382	GAGAACU	ENSMUST00000035043.5|Armc8|ENSMUSG00000032468.5|armadillo repeat containing 8
mm10_v2_chr3_-_26133734_26133734	0.00795607	GAGAACU	ENSMUST00000108308.3|Nlgn1|ENSMUSG00000063887.7|neuroligin 1 	ENSMUST00000075054.4|Nlgn1|ENSMUSG00000063887.7|neuroligin 1
mm10_v2_chr9_+_40269430_40269441	0.00774983	GAGAACU	ENSMUST00000171835.2|Scn3b|ENSMUSG00000049281.9|sodium channel, voltage-gated, type III, beta
mm10_v2_chr16_+_4639941_4639978	0.00755367	GAGAACU	ENSMUST00000038770.3|Vasn|ENSMUSG00000039646.5|vasorin
mm10_v2_chr2_+_26916360_26916396	0.00692468	GAGAACU	ENSMUST00000015017.7|Surf2|ENSMUSG00000014873.9|surfeit gene 2
mm10_v2_chrX_-_165327376_165327421	0.00658389	GAGAACU	ENSMUST00000058787.8|Glra2|ENSMUSG00000018589.8|glycine receptor, alpha 2 subunit
mm10_v2_chr18_-_73703739_73703806	0.00577447	GAGAACU	ENSMUST00000025393.7|Smad4|ENSMUSG00000024515.7|SMAD family member 4
mm10_v2_chr1_+_60746358_60746427	0.00576558	GAGAACU	ENSMUST00000027165.2|Cd28|ENSMUSG00000026012.2|CD28 antigen
mm10_v2_chr7_-_111082997_111083037	0.00520767	GAGAACU	ENSMUST00000161051.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000160132.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000106666.3|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000162415.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2
mm10_v2_chr2_-_104494400_104494463	0.00454691	GAGAACU	ENSMUST00000028600.7|Hipk3|ENSMUSG00000027177.8|homeodomain interacting protein kinase 3
mm10_v2_chr12_+_86241848_86241936	0.0042767	GAGAACU	ENSMUST00000071106.4|Gpatch2l|ENSMUSG00000021254.8|G patch domain containing 2 like
mm10_v2_chr14_-_26971232_26971232	0.00395449	GAGAACU	ENSMUST00000036570.4|Appl1|ENSMUSG00000040760.4|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm10_v2_chr3_+_108284089_108284100	0.00394376	GAGAACU	ENSMUST00000102632.4|Sort1|ENSMUSG00000068747.8|sortilin 1
mm10_v2_chr11_-_5381734_5381745	0.00335028	GAGAACU	ENSMUST00000172492.1|Znrf3|ENSMUSG00000041961.8|zinc and ring finger 3
mm10_v2_chr17_-_35046539_35046622	0.00237576	GAGAACU	ENSMUST00000007250.7|Msh5|ENSMUSG00000007035.9|mutS homolog 5 (E. coli)
mm10_v2_chr10_+_85928491_85928491	0.00234364	GAGAACU	ENSMUST00000170396.1|Ascl4|ENSMUSG00000085111.2|achaete-scute complex homolog 4 (Drosophila)
mm10_v2_chr1_+_180568913_180568960	0.0020087	GAGAACU	ENSMUST00000027777.6|Parp1|ENSMUSG00000026496.6|poly (ADP-ribose) polymerase family, member 1
mm10_v2_chr2_-_34826071_34826087	0.00187856	GAGAACU	ENSMUST00000113077.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000028220.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr16_+_84835070_84835124	0.00180979	GAGAACU	ENSMUST00000009120.7|Gabpa|ENSMUSG00000008976.10|GA repeat binding protein, alpha
mm10_v2_chr2_-_181592733_181592803	0.0013509	GAGAACU	ENSMUST00000108789.2|Znf512b|ENSMUSG00000000823.10|zinc finger protein 512B 	ENSMUST00000153998.1|Znf512b|ENSMUSG00000000823.10|zinc finger protein 512B
mm10_v2_chr2_+_130450259_130450309	0.0012776	GAGAACU	ENSMUST00000028769.6|Ptpra|ENSMUSG00000027303.11|protein tyrosine phosphatase, receptor type, A
mm10_v2_chr2_+_37516618_37516634	6.41149e-06	GAGAACU	ENSMUST00000065441.6|Gpr21|ENSMUSG00000053164.6|G protein-coupled receptor 21
