mm10_v2_chr7_+_143005046_143005105	1.97077	Foxg1	ENSMUST00000009396.6|Tspan32|ENSMUSG00000000244.10|tetraspanin 32
mm10_v2_chr10_-_120476469_120476527	1.64857	Foxg1	ENSMUST00000072777.7|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2 	ENSMUST00000159699.1|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2
mm10_v2_chr3_-_106149761_106149761	1.52455	Foxg1	ENSMUST00000149836.1|Chi3l3|ENSMUSG00000040809.10|chitinase 3-like 3
mm10_v2_chr15_+_79891631_79891694	1.48933	Foxg1	ENSMUST00000177350.1|Apobec3|ENSMUSG00000009585.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 	ENSMUST00000177483.1|Apobec3|ENSMUSG00000009585.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
mm10_v2_chr15_-_95528702_95528777	1.06695	Foxg1	ENSMUST00000166170.1|Nell2|ENSMUSG00000022454.10|NEL-like 2
mm10_v2_chr15_-_95528228_95528266	0.896733	Foxg1	ENSMUST00000075275.2|Nell2|ENSMUSG00000022454.10|NEL-like 2
mm10_v2_chr3_-_127225917_127225959	0.86472	Foxg1	ENSMUST00000182064.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182662.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr4_+_154960915_154960930	0.860233	Foxg1	ENSMUST00000049621.6|Hes5|ENSMUSG00000048001.7|hairy and enhancer of split 5 (Drosophila)
mm10_v2_chr13_-_71963713_71963729	0.830773	Foxg1	ENSMUST00000077337.8|Irx1|ENSMUSG00000060969.8|Iroquois related homeobox 1 (Drosophila)
mm10_v2_chr2_-_152830615_152830680	0.816271	Foxg1	ENSMUST00000146380.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000134902.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000134357.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000109820.3|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr7_-_115824699_115824752	0.806854	Foxg1	ENSMUST00000169129.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr2_-_152831112_152831326	0.796846	Foxg1	ENSMUST00000128172.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr3_-_127225847_127225915	0.782326	Foxg1	ENSMUST00000182726.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182779.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr1_-_180813534_180813583	0.780689	Foxg1	ENSMUST00000159789.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000081026.4|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr1_-_180813591_180813632	0.758974	Foxg1	ENSMUST00000162118.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000159685.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A 	ENSMUST00000161308.1|H3f3a|ENSMUSG00000060743.6|H3 histone, family 3A
mm10_v2_chr4_+_48585193_48585215	0.742721	Foxg1	ENSMUST00000107703.1|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr17_+_34377124_34377154	0.719162	Foxg1	ENSMUST00000080254.5|Btnl1|ENSMUSG00000062638.10|butyrophilin-like 1
mm10_v2_chr4_+_48585276_48585365	0.71302	Foxg1	ENSMUST00000123476.1|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr2_-_154558834_154558897	0.698409	Foxg1	ENSMUST00000109716.2|Necab3|ENSMUSG00000027489.9|N-terminal EF-hand calcium binding protein 3 	ENSMUST00000000895.6|Necab3|ENSMUSG00000027489.9|N-terminal EF-hand calcium binding protein 3 	ENSMUST00000125793.1|Necab3|ENSMUSG00000027489.9|N-terminal EF-hand calcium binding protein 3
mm10_v2_chr1_+_82839449_82839518	0.691352	Foxg1	ENSMUST00000113444.1|Agfg1|ENSMUSG00000026159.7|ArfGAP with FG repeats 1 	ENSMUST00000063380.4|Agfg1|ENSMUSG00000026159.7|ArfGAP with FG repeats 1
mm10_v2_chr15_+_103240405_103240432	0.654535	Foxg1	ENSMUST00000036004.9|Hnrnpa1|ENSMUSG00000046434.9|heterogeneous nuclear ribonucleoprotein A1 	ENSMUST00000087351.7|Hnrnpa1|ENSMUSG00000046434.9|heterogeneous nuclear ribonucleoprotein A1
mm10_v2_chr4_+_48585135_48585187	0.651498	Foxg1	ENSMUST00000030032.6|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr11_+_3488275_3488287	0.634174	Foxg1	ENSMUST00000064265.6|Pla2g3|ENSMUSG00000034579.11|phospholipase A2, group III
mm10_v2_chr18_+_68300351_68300422	0.631698	Foxg1	ENSMUST00000009679.4|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000131075.1|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000025427.7|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000139111.1|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase
mm10_v2_chr19_+_8617991_8618000	0.631664	Foxg1	ENSMUST00000010250.2|Slc22a6|ENSMUSG00000024650.4|solute carrier family 22 (organic anion transporter), member 6
mm10_v2_chr6_-_12109583_12109583	0.581768	Foxg1	ENSMUST00000080891.5|Gm6578|ENSMUSG00000057223.5|predicted gene 6578
mm10_v2_chr1_+_180935022_180935041	0.538998	Foxg1	ENSMUST00000037361.8|Lefty1|ENSMUSG00000038793.8|left right determination factor 1
mm10_v2_chr2_-_164389095_164389095	0.516921	Foxg1	ENSMUST00000167427.1|Slpi|ENSMUSG00000017002.8|secretory leukocyte peptidase inhibitor
mm10_v2_chr12_+_112999964_112999964	0.497523	Foxg1	ENSMUST00000180971.1|9230104M06Rik|ENSMUSG00000097100.1|RIKEN cDNA 9230104M06 gene
mm10_v2_chr15_-_85581809_85581821	0.428556	Foxg1	ENSMUST00000023015.7|Wnt7b|ENSMUSG00000022382.8|wingless-related MMTV integration site 7B
mm10_v2_chr8_+_92901387_92901411	0.421561	Foxg1	ENSMUST00000104947.2|Capns2|ENSMUSG00000078144.2|calpain, small subunit 2
mm10_v2_chr9_+_64121501_64121606	0.42037	Foxg1	ENSMUST00000118215.1|Lctl|ENSMUSG00000032401.9|lactase-like
mm10_v2_chr3_-_50443603_50443615	0.407176	Foxg1	ENSMUST00000029297.4|Slc7a11|ENSMUSG00000027737.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm10_v2_chr7_-_41560795_41560836	0.402952	Foxg1	ENSMUST00000164677.1|Gm6871|ENSMUSG00000090744.1|predicted gene 6871 	ENSMUST00000073410.5|Gm6871|ENSMUSG00000090744.1|predicted gene 6871
mm10_v2_chr5_+_34369909_34369970	0.383241	Foxg1	ENSMUST00000180376.1|Fam193a|ENSMUSG00000037210.10|family with sequence similarity 193, member A
mm10_v2_chr19_-_4615453_4615512	0.379878	Foxg1	ENSMUST00000053597.2|Lrfn4|ENSMUSG00000045045.7|leucine rich repeat and fibronectin type III domain containing 4
mm10_v2_chr9_-_60649793_60649805	0.361318	Foxg1	ENSMUST00000053171.7|Lrrc49|ENSMUSG00000047766.9|leucine rich repeat containing 49
mm10_v2_chr14_-_24245913_24245925	0.347968	Foxg1	ENSMUST00000073687.6|Dlg5|ENSMUSG00000021782.8|discs, large homolog 5 (Drosophila) 	ENSMUST00000090398.4|Dlg5|ENSMUSG00000021782.8|discs, large homolog 5 (Drosophila)
mm10_v2_chr3_-_95015416_95015462	0.34079	Foxg1	ENSMUST00000132195.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687
mm10_v2_chr16_-_97504925_97504943	0.329239	Foxg1	ENSMUST00000049721.7|Fam3b|ENSMUSG00000022938.7|family with sequence similarity 3, member B
mm10_v2_chr13_-_3918157_3918220	0.323916	Foxg1	ENSMUST00000091853.4|Net1|ENSMUSG00000021215.8|neuroepithelial cell transforming gene 1
mm10_v2_chr2_-_57124003_57124071	0.298673	Foxg1	ENSMUST00000112629.1|Nr4a2|ENSMUSG00000026826.7|nuclear receptor subfamily 4, group A, member 2
mm10_v2_chr18_+_73859366_73859402	0.215576	Foxg1	ENSMUST00000120033.1|Mro|ENSMUSG00000064036.9|maestro 	ENSMUST00000179472.1|Mro|ENSMUSG00000064036.9|maestro 	ENSMUST00000119239.1|Mro|ENSMUSG00000064036.9|maestro
mm10_v2_chr16_-_90284412_90284498	0.190982	Foxg1	ENSMUST00000039280.7|Scaf4|ENSMUSG00000022983.9|SR-related CTD-associated factor 4
mm10_v2_chr6_-_72345144_72345206	0.173569	Foxg1	ENSMUST00000070345.3|Usp39|ENSMUSG00000056305.3|ubiquitin specific peptidase 39
mm10_v2_chr12_-_10900296_10900318	0.158934	Foxg1	ENSMUST00000085735.2|Pgk1-rs7|ENSMUSG00000066632.2|phosphoglycerate kinase-1, related sequence-7
mm10_v2_chr1_-_72874877_72874891	0.146206	Foxg1	ENSMUST00000027377.8|Igfbp5|ENSMUSG00000026185.8|insulin-like growth factor binding protein 5
mm10_v2_chr12_-_113000621_113000656	0.144886	Foxg1	ENSMUST00000011302.7|Brf1|ENSMUSG00000011158.7|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)
mm10_v2_chr3_-_95015214_95015246	0.138007	Foxg1	ENSMUST00000128438.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687 	ENSMUST00000149747.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687 	ENSMUST00000019482.1|Zfp687|ENSMUSG00000019338.7|zinc finger protein 687
mm10_v2_chr9_+_54586450_54586512	0.115424	Foxg1	ENSMUST00000167866.1|Idh3a|ENSMUSG00000032279.10|isocitrate dehydrogenase 3 (NAD+) alpha
mm10_v2_chr16_-_90284300_90284348	0.101494	Foxg1	ENSMUST00000163419.1|Scaf4|ENSMUSG00000022983.9|SR-related CTD-associated factor 4
mm10_v2_chr5_-_121191365_121191400	0.097417	Foxg1	ENSMUST00000100770.2|Ptpn11|ENSMUSG00000043733.8|protein tyrosine phosphatase, non-receptor type 11 	ENSMUST00000054547.7|Ptpn11|ENSMUSG00000043733.8|protein tyrosine phosphatase, non-receptor type 11
mm10_v2_chr11_-_28583995_28584105	0.092937	Foxg1	ENSMUST00000146385.2|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A
mm10_v2_chr10_+_22158566_22158586	0.0804147	Foxg1	ENSMUST00000181645.1|Raet1e|ENSMUSG00000053219.9|retinoic acid early transcript 1E 	ENSMUST00000105522.2|H60b|ENSMUSG00000075297.4|histocompatibility 60b
mm10_v2_chr15_+_66577536_66577637	0.0676098	Foxg1	ENSMUST00000048188.8|Phf20l1|ENSMUSG00000072501.4|PHD finger protein 20-like 1
mm10_v2_chr2_+_174330006_174330126	0.0632349	Foxg1	ENSMUST00000109085.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus 	ENSMUST00000109087.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus 	ENSMUST00000109084.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm10_v2_chr12_-_104751900_104751952	0.0594422	Foxg1	ENSMUST00000041987.6|Dicer1|ENSMUSG00000041415.9|dicer 1, ribonuclease type III
mm10_v2_chr4_-_155653184_155653384	0.0590544	Foxg1	ENSMUST00000030937.1|Mmp23|ENSMUSG00000029061.2|matrix metallopeptidase 23
mm10_v2_chr11_-_120041774_120041790	0.0559651	Foxg1	ENSMUST00000103019.1|Aatk|ENSMUSG00000025375.9|apoptosis-associated tyrosine kinase
mm10_v2_chr8_+_46163733_46163750	0.0476799	Foxg1	ENSMUST00000110376.1|4933411K20Rik|ENSMUSG00000031631.9|RIKEN cDNA 4933411K20 gene
mm10_v2_chr8_+_46163651_46163729	0.0475529	Foxg1	ENSMUST00000034048.6|4933411K20Rik|ENSMUSG00000031631.9|RIKEN cDNA 4933411K20 gene 	ENSMUST00000145229.1|4933411K20Rik|ENSMUSG00000031631.9|RIKEN cDNA 4933411K20 gene
mm10_v2_chr4_+_128058962_128058962	0.0207021	Foxg1	ENSMUST00000184063.1|Csmd2|ENSMUSG00000028804.12|CUB and Sushi multiple domains 2
mm10_v2_chr13_+_34162953_34163033	0.00468641	Foxg1	ENSMUST00000124996.1|Psmg4|ENSMUSG00000071451.3|proteasome (prosome, macropain) assembly chaperone 4 	ENSMUST00000147632.1|Psmg4|ENSMUSG00000071451.3|proteasome (prosome, macropain) assembly chaperone 4
