mm10_v2_chr3_-_113258837_113258837	55.1249	Foxa2_Foxa1	ENSMUST00000098673.3|Amy2a5|ENSMUSG00000074268.3|amylase 2a5
mm10_v2_chr3_-_113532288_113532428	39.0012	Foxa2_Foxa1	ENSMUST00000132353.1|Amy2a1|ENSMUSG00000070360.5|amylase 2a1
mm10_v2_chr6_+_30541582_30541650	28.1743	Foxa2_Foxa1	ENSMUST00000096066.4|Cpa2|ENSMUSG00000071553.4|carboxypeptidase A2, pancreatic
mm10_v2_chr3_-_20275659_20275733	27.1149	Foxa2_Foxa1	ENSMUST00000011607.5|Cpb1|ENSMUSG00000011463.5|carboxypeptidase B1 (tissue)
mm10_v2_chr17_-_31144271_31144288	25.5031	Foxa2_Foxa1	ENSMUST00000024826.7|Tff2|ENSMUSG00000024028.7|trefoil factor 2 (spasmolytic protein 1)
mm10_v2_chr2_-_62483637_62483653	20.0255	Foxa2_Foxa1	ENSMUST00000136686.1|Gcg|ENSMUSG00000000394.9|glucagon 	ENSMUST00000102733.3|Gcg|ENSMUSG00000000394.9|glucagon
mm10_v2_chr7_+_131032061_131032076	17.4223	Foxa2_Foxa1	ENSMUST00000084509.3|Dmbt1|ENSMUSG00000047517.9|deleted in malignant brain tumors 1
mm10_v2_chr6_+_142298419_142298435	16.6854	Foxa2_Foxa1	ENSMUST00000041993.2|Iapp|ENSMUSG00000041681.2|islet amyloid polypeptide
mm10_v2_chr3_+_107230608_107230617	13.0845	Foxa2_Foxa1	ENSMUST00000179399.1|A630076J17Rik|ENSMUSG00000094613.1|RIKEN cDNA A630076J17 gene
mm10_v2_chr9_+_46268601_46268633	12.3517	Foxa2_Foxa1	ENSMUST00000121598.1|Apoa5|ENSMUSG00000032079.5|apolipoprotein A-V
mm10_v2_chr6_-_136922169_136922198	11.1887	Foxa2_Foxa1	ENSMUST00000032343.6|Erp27|ENSMUSG00000030219.7|endoplasmic reticulum protein 27
mm10_v2_chr5_-_108795352_108795374	8.8991	Foxa2_Foxa1	ENSMUST00000004943.1|Tmed11|ENSMUSG00000004821.1|transmembrane emp24 protein transport domain containing
mm10_v2_chr6_-_41446062_41446097	8.87986	Foxa2_Foxa1	ENSMUST00000095999.5|Gm10334|ENSMUSG00000071517.5|predicted gene 10334
mm10_v2_chr3_-_113324052_113324052	8.3644	Foxa2_Foxa1	ENSMUST00000179314.1|Amy2a3|ENSMUSG00000093931.1|amylase 2a3
mm10_v2_chr3_-_113291449_113291449	8.28432	Foxa2_Foxa1	ENSMUST00000179568.1|Amy2a4|ENSMUSG00000096770.1|amylase 2a4
mm10_v2_chr4_-_57916283_57916306	8.18161	Foxa2_Foxa1	ENSMUST00000063816.5|D630039A03Rik|ENSMUSG00000052117.5|RIKEN cDNA D630039A03 gene
mm10_v2_chr7_+_140763739_140763828	7.7012	Foxa2_Foxa1	ENSMUST00000026552.7|Cyp2e1|ENSMUSG00000025479.8|cytochrome P450, family 2, subfamily e, polypeptide 1
mm10_v2_chr15_+_10223974_10224034	7.11068	Foxa2_Foxa1	ENSMUST00000128450.1|Prlr|ENSMUSG00000005268.14|prolactin receptor 	ENSMUST00000148257.1|Prlr|ENSMUSG00000005268.14|prolactin receptor 	ENSMUST00000128921.1|Prlr|ENSMUSG00000005268.14|prolactin receptor
mm10_v2_chr1_+_130865669_130865768	6.8243	Foxa2_Foxa1	ENSMUST00000038829.5|Faim3|ENSMUSG00000042474.5|Fas apoptotic inhibitory molecule 3
mm10_v2_chr3_-_145032765_145032781	6.27532	Foxa2_Foxa1	ENSMUST00000029919.5|Clca3|ENSMUSG00000028255.5|chloride channel calcium activated 3
mm10_v2_chr2_+_164403194_164403219	6.17865	Foxa2_Foxa1	ENSMUST00000017151.1|Rbpjl|ENSMUSG00000017007.3|recombination signal binding protein for immunoglobulin kappa J region-like
mm10_v2_chr4_-_6275629_6275634	6.16489	Foxa2_Foxa1	ENSMUST00000029905.1|Cyp7a1|ENSMUSG00000028240.2|cytochrome P450, family 7, subfamily a, polypeptide 1
mm10_v2_chr19_+_23141183_23141263	4.79757	Foxa2_Foxa1	ENSMUST00000036884.1|Klf9|ENSMUSG00000033863.1|Kruppel-like factor 9
mm10_v2_chr6_-_87388878_87388935	4.75463	Foxa2_Foxa1	ENSMUST00000032127.4|Gkn3|ENSMUSG00000030048.4|gastrokine 3
mm10_v2_chr2_+_58755177_58755195	4.72751	Foxa2_Foxa1	ENSMUST00000102755.3|Upp2|ENSMUSG00000026839.10|uridine phosphorylase 2
mm10_v2_chr4_+_34893772_34893788	4.64019	Foxa2_Foxa1	ENSMUST00000029975.3|Cga|ENSMUSG00000028298.4|glycoprotein hormones, alpha subunit 	ENSMUST00000135871.1|Cga|ENSMUSG00000028298.4|glycoprotein hormones, alpha subunit 	ENSMUST00000108130.1|Cga|ENSMUSG00000028298.4|glycoprotein hormones, alpha subunit
mm10_v2_chr17_-_12675833_12675844	4.63792	Foxa2_Foxa1	ENSMUST00000024596.8|Slc22a1|ENSMUSG00000023829.8|solute carrier family 22 (organic cation transporter), member 1
mm10_v2_chr2_-_134554348_134554369	4.38072	Foxa2_Foxa1	ENSMUST00000028704.2|Hao1|ENSMUSG00000027261.2|hydroxyacid oxidase 1, liver
mm10_v2_chr2_+_58754910_58754942	4.12982	Foxa2_Foxa1	ENSMUST00000059102.6|Upp2|ENSMUSG00000026839.10|uridine phosphorylase 2
mm10_v2_chr16_+_22892035_22892051	4.01194	Foxa2_Foxa1	ENSMUST00000023583.5|Ahsg|ENSMUSG00000022868.5|alpha-2-HS-glycoprotein
mm10_v2_chr12_-_80968075_80968086	3.98933	Foxa2_Foxa1	ENSMUST00000095572.4|Slc10a1|ENSMUSG00000021135.7|solute carrier family 10 (sodium/bile acid cotransporter family), member 1
mm10_v2_chr1_-_130661584_130661610	3.94446	Foxa2_Foxa1	ENSMUST00000137276.2|C4bp|ENSMUSG00000026405.8|complement component 4 binding protein
mm10_v2_chr9_+_37539255_37539279	3.71974	Foxa2_Foxa1	ENSMUST00000002008.5|Vsig2|ENSMUSG00000001943.7|V-set and immunoglobulin domain containing 2
mm10_v2_chr10_-_41611319_41611319	3.66851	Foxa2_Foxa1	ENSMUST00000179614.1|Ccdc162|ENSMUSG00000075225.5|coiled-coil domain containing 162
mm10_v2_chr17_+_47726834_47726848	3.52842	Foxa2_Foxa1	ENSMUST00000024782.5|Pgc|ENSMUSG00000023987.8|progastricsin (pepsinogen C) 	ENSMUST00000144955.1|Pgc|ENSMUSG00000023987.8|progastricsin (pepsinogen C)
mm10_v2_chr5_-_89457763_89457898	3.48833	Foxa2_Foxa1	ENSMUST00000049209.8|Gc|ENSMUSG00000035540.8|group specific component
mm10_v2_chr17_-_31165045_31165053	3.46383	Foxa2_Foxa1	ENSMUST00000024831.6|Tff1|ENSMUSG00000024032.6|trefoil factor 1
mm10_v2_chr4_+_150853919_150854050	3.43924	Foxa2_Foxa1	ENSMUST00000073600.2|Errfi1|ENSMUSG00000028967.4|ERBB receptor feedback inhibitor 1
mm10_v2_chr3_+_19957240_19957284	3.35151	Foxa2_Foxa1	ENSMUST00000108325.2|Cp|ENSMUSG00000003617.10|ceruloplasmin
mm10_v2_chr16_-_29378667_29378732	3.26286	Foxa2_Foxa1	ENSMUST00000143373.1|Atp13a5|ENSMUSG00000048939.7|ATPase type 13A5 	ENSMUST00000075806.4|Atp13a5|ENSMUSG00000048939.7|ATPase type 13A5
mm10_v2_chr2_-_148040196_148040211	3.25118	Foxa2_Foxa1	ENSMUST00000136555.1|9030622O22Rik|ENSMUSG00000086141.1|RIKEN cDNA 9030622O22 gene
mm10_v2_chr2_+_69219971_69220005	3.23736	Foxa2_Foxa1	ENSMUST00000005364.5|G6pc2|ENSMUSG00000005232.5|glucose-6-phosphatase, catalytic, 2 	ENSMUST00000112317.2|G6pc2|ENSMUSG00000005232.5|glucose-6-phosphatase, catalytic, 2
mm10_v2_chr4_-_127354074_127354086	3.21077	Foxa2_Foxa1	ENSMUST00000106090.1|Gjb4|ENSMUSG00000046623.2|gap junction protein, beta 4 	ENSMUST00000060419.1|Gjb4|ENSMUSG00000046623.2|gap junction protein, beta 4
mm10_v2_chr1_-_130661613_130661637	3.1819	Foxa2_Foxa1	ENSMUST00000027657.7|C4bp|ENSMUSG00000026405.8|complement component 4 binding protein
mm10_v2_chr17_+_12378603_12378621	3.0505	Foxa2_Foxa1	ENSMUST00000014578.5|Plg|ENSMUSG00000059481.4|plasminogen
mm10_v2_chr12_-_103773592_103773610	3.01728	Foxa2_Foxa1	ENSMUST00000078869.5|Serpina1d|ENSMUSG00000071177.4|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm10_v2_chr13_+_112467504_112467593	3.013	Foxa2_Foxa1	ENSMUST00000183868.1|Il6st|ENSMUSG00000021756.6|interleukin 6 signal transducer
mm10_v2_chr10_+_111506286_111506286	2.97865	Foxa2_Foxa1	ENSMUST00000164773.1|Phlda1|ENSMUSG00000020205.7|pleckstrin homology-like domain, family A, member 1
mm10_v2_chr1_-_157256682_157256701	2.92437	Foxa2_Foxa1	ENSMUST00000134543.1|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2
mm10_v2_chr4_+_102570065_102570124	2.90972	Foxa2_Foxa1	ENSMUST00000097950.2|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr17_+_12584183_12584195	2.85321	Foxa2_Foxa1	ENSMUST00000046959.7|Slc22a2|ENSMUSG00000040966.9|solute carrier family 22 (organic cation transporter), member 2
mm10_v2_chr14_+_41131777_41131794	2.85141	Foxa2_Foxa1	ENSMUST00000022314.3|Sftpa1|ENSMUSG00000021789.8|surfactant associated protein A1 	ENSMUST00000170719.1|Sftpa1|ENSMUSG00000021789.8|surfactant associated protein A1
mm10_v2_chr13_+_4049001_4049030	2.66095	Foxa2_Foxa1	ENSMUST00000118717.2|Akr1c14|ENSMUSG00000033715.8|aldo-keto reductase family 1, member C14
mm10_v2_chr15_-_3303521_3303569	2.65649	Foxa2_Foxa1	ENSMUST00000165386.1|Ccdc152|ENSMUSG00000091119.1|coiled-coil domain containing 152
mm10_v2_chr2_-_160859601_160859631	2.6252	Foxa2_Foxa1	ENSMUST00000103112.1|Zhx3|ENSMUSG00000035877.11|zinc fingers and homeoboxes 3
mm10_v2_chr7_-_142661858_142661880	2.54186	Foxa2_Foxa1	ENSMUST00000145896.2|Igf2|ENSMUSG00000048583.10|insulin-like growth factor 2
mm10_v2_chr10_+_60106452_60106468	2.45661	Foxa2_Foxa1	ENSMUST00000165024.2|Spock2|ENSMUSG00000058297.10|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm10_v2_chr15_-_97020322_97020336	2.44168	Foxa2_Foxa1	ENSMUST00000166223.1|Slc38a4|ENSMUSG00000022464.7|solute carrier family 38, member 4
mm10_v2_chr13_+_23807027_23807063	2.43662	Foxa2_Foxa1	ENSMUST00000006786.4|Slc17a2|ENSMUSG00000036110.8|solute carrier family 17 (sodium phosphate), member 2 	ENSMUST00000099697.2|Slc17a2|ENSMUSG00000036110.8|solute carrier family 17 (sodium phosphate), member 2
mm10_v2_chr11_+_94565039_94565056	2.43343	Foxa2_Foxa1	ENSMUST00000040418.8|Chad|ENSMUSG00000039084.8|chondroadherin
mm10_v2_chr12_-_103738158_103738158	2.42764	Foxa2_Foxa1	ENSMUST00000095450.4|Serpina1b|ENSMUSG00000071178.5|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm10_v2_chr12_-_103904887_103904955	2.35912	Foxa2_Foxa1	ENSMUST00000074051.5|Serpina1c|ENSMUSG00000079015.2|serine (or cysteine) peptidase inhibitor, clade A, member 1C
mm10_v2_chr2_-_102400863_102400970	2.34908	Foxa2_Foxa1	ENSMUST00000102573.1|Trim44|ENSMUSG00000027189.10|tripartite motif-containing 44
mm10_v2_chr16_+_33518528_33518542	2.31355	Foxa2_Foxa1	ENSMUST00000119173.1|Slc12a8|ENSMUSG00000035506.10|solute carrier family 12 (potassium/chloride transporters), member 8
mm10_v2_chr11_-_68386821_68386835	2.31206	Foxa2_Foxa1	ENSMUST00000021284.3|Ntn1|ENSMUSG00000020902.6|netrin 1
mm10_v2_chr7_-_105600103_105600123	2.31079	Foxa2_Foxa1	ENSMUST00000033185.8|Hpx|ENSMUSG00000030895.8|hemopexin
mm10_v2_chr1_-_97977233_97977279	2.30176	Foxa2_Foxa1	ENSMUST00000161567.1|Pam|ENSMUSG00000026335.10|peptidylglycine alpha-amidating monooxygenase
mm10_v2_chr9_-_71163224_71163293	2.25802	Foxa2_Foxa1	ENSMUST00000074465.2|Aqp9|ENSMUSG00000032204.7|aquaporin 9
mm10_v2_chr16_+_91269759_91269778	2.23175	Foxa2_Foxa1	ENSMUST00000056882.5|Olig1|ENSMUSG00000046160.5|oligodendrocyte transcription factor 1
mm10_v2_chr8_-_65129317_65129328	2.22968	Foxa2_Foxa1	ENSMUST00000098713.3|BC030870|ENSMUSG00000074300.3|cDNA sequence BC030870
mm10_v2_chr3_+_98222148_98222164	2.21733	Foxa2_Foxa1	ENSMUST00000029469.4|Reg4|ENSMUSG00000027876.4|regenerating islet-derived family, member 4
mm10_v2_chr11_-_60036917_60037005	2.20767	Foxa2_Foxa1	ENSMUST00000102692.3|Pemt|ENSMUSG00000000301.10|phosphatidylethanolamine N-methyltransferase
mm10_v2_chr3_+_19957088_19957114	2.19177	Foxa2_Foxa1	ENSMUST00000108328.1|Cp|ENSMUSG00000003617.10|ceruloplasmin
mm10_v2_chr18_-_38918642_38918771	2.17519	Foxa2_Foxa1	ENSMUST00000040647.4|Fgf1|ENSMUSG00000036585.9|fibroblast growth factor 1
mm10_v2_chr5_+_90561102_90561209	2.05378	Foxa2_Foxa1	ENSMUST00000094615.4|5830473C10Rik|ENSMUSG00000070690.4|RIKEN cDNA 5830473C10 gene
mm10_v2_chr8_+_45628176_45628219	2.04217	Foxa2_Foxa1	ENSMUST00000130850.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr13_+_40859768_40859822	2.01634	Foxa2_Foxa1	ENSMUST00000110191.2|Gcnt2|ENSMUSG00000021360.9|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm10_v2_chr15_-_5108469_5108490	1.95031	Foxa2_Foxa1	ENSMUST00000141020.1|Card6|ENSMUSG00000041849.7|caspase recruitment domain family, member 6
mm10_v2_chr11_+_78499087_78499123	1.89835	Foxa2_Foxa1	ENSMUST00000017488.4|Vtn|ENSMUSG00000017344.4|vitronectin
mm10_v2_chr11_-_68386974_68387012	1.88337	Foxa2_Foxa1	ENSMUST00000135141.1|Ntn1|ENSMUSG00000020902.6|netrin 1
mm10_v2_chr3_+_19957037_19957073	1.82468	Foxa2_Foxa1	ENSMUST00000091309.5|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000108329.1|Cp|ENSMUSG00000003617.10|ceruloplasmin 	ENSMUST00000003714.6|Cp|ENSMUSG00000003617.10|ceruloplasmin
mm10_v2_chr1_-_139858684_139858729	1.81988	Foxa2_Foxa1	ENSMUST00000094489.3|Cfhr2|ENSMUSG00000033898.11|complement factor H-related 2
mm10_v2_chr10_-_61979073_61979108	1.79446	Foxa2_Foxa1	ENSMUST00000105453.1|Col13a1|ENSMUSG00000058806.8|collagen, type XIII, alpha 1 	ENSMUST00000105452.2|Col13a1|ENSMUSG00000058806.8|collagen, type XIII, alpha 1 	ENSMUST00000105454.2|Col13a1|ENSMUSG00000058806.8|collagen, type XIII, alpha 1
mm10_v2_chr19_-_58455903_58455914	1.78633	Foxa2_Foxa1	ENSMUST00000131877.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1
mm10_v2_chr1_+_67123015_67123069	1.78348	Foxa2_Foxa1	ENSMUST00000027144.7|Cps1|ENSMUSG00000025991.8|carbamoyl-phosphate synthetase 1
mm10_v2_chr2_-_147186389_147186413	1.73126	Foxa2_Foxa1	ENSMUST00000109970.3|Nkx2-2|ENSMUSG00000027434.10|NK2 homeobox 2 	ENSMUST00000067075.5|Nkx2-2|ENSMUSG00000027434.10|NK2 homeobox 2
mm10_v2_chr14_-_41185188_41185199	1.71918	Foxa2_Foxa1	ENSMUST00000077136.3|Sftpd|ENSMUSG00000021795.9|surfactant associated protein D
mm10_v2_chr1_+_34121250_34121288	1.70642	Foxa2_Foxa1	ENSMUST00000183006.1|Dst|ENSMUSG00000026131.11|dystonin
mm10_v2_chr6_-_3494587_3494598	1.70641	Foxa2_Foxa1	ENSMUST00000049985.8|Hepacam2|ENSMUSG00000044156.8|HEPACAM family member 2
mm10_v2_chr8_-_45294854_45294863	1.70562	Foxa2_Foxa1	ENSMUST00000116473.2|Klkb1|ENSMUSG00000031640.9|kallikrein B, plasma 1
mm10_v2_chr9_-_107668967_107668995	1.70362	Foxa2_Foxa1	ENSMUST00000177567.1|Slc38a3|ENSMUSG00000010064.9|solute carrier family 38, member 3
mm10_v2_chr19_-_58455161_58455324	1.6316	Foxa2_Foxa1	ENSMUST00000135730.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1 	ENSMUST00000152507.1|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1
mm10_v2_chr17_-_56121946_56121958	1.62222	Foxa2_Foxa1	ENSMUST00000041357.7|Lrg1|ENSMUSG00000037095.7|leucine-rich alpha-2-glycoprotein 1
mm10_v2_chr16_-_38294774_38294838	1.61029	Foxa2_Foxa1	ENSMUST00000023504.4|Nr1i2|ENSMUSG00000022809.4|nuclear receptor subfamily 1, group I, member 2
mm10_v2_chrX_+_57212110_57212143	1.59968	Foxa2_Foxa1	ENSMUST00000033466.1|Cd40lg|ENSMUSG00000031132.1|CD40 ligand
mm10_v2_chr16_+_33518278_33518340	1.59095	Foxa2_Foxa1	ENSMUST00000122427.1|Slc12a8|ENSMUSG00000035506.10|solute carrier family 12 (potassium/chloride transporters), member 8 	ENSMUST00000059056.8|Slc12a8|ENSMUSG00000035506.10|solute carrier family 12 (potassium/chloride transporters), member 8
mm10_v2_chr6_-_83656082_83656187	1.5844	Foxa2_Foxa1	ENSMUST00000014686.2|Clec4f|ENSMUSG00000014542.2|C-type lectin domain family 4, member f
mm10_v2_chr9_+_74848437_74848531	1.56242	Foxa2_Foxa1	ENSMUST00000161862.1|Gm16551|ENSMUSG00000066477.7|predicted gene 16551 	ENSMUST00000160950.1|Gm20649|ENSMUSG00000093662.1|predicted gene 20649 	ENSMUST00000162089.1|Gm16551|ENSMUSG00000066477.7|predicted gene 16551 	ENSMUST00000160017.1|Gm16551|ENSMUSG00000066477.7|predicted gene 16551
mm10_v2_chr7_+_113765998_113766039	1.54727	Foxa2_Foxa1	ENSMUST00000046687.9|Spon1|ENSMUSG00000038156.9|spondin 1, (f-spondin) extracellular matrix protein
mm10_v2_chr14_-_30943275_30943294	1.5456	Foxa2_Foxa1	ENSMUST00000006704.8|Itih1|ENSMUSG00000006529.8|inter-alpha trypsin inhibitor, heavy chain 1 	ENSMUST00000163118.1|Itih1|ENSMUSG00000006529.8|inter-alpha trypsin inhibitor, heavy chain 1
mm10_v2_chr2_+_176236860_176236860	1.53106	Foxa2_Foxa1	ENSMUST00000166464.1|2210418O10Rik|ENSMUSG00000078894.3|RIKEN cDNA 2210418O10 gene
mm10_v2_chr6_+_129533183_129533205	1.48739	Foxa2_Foxa1	ENSMUST00000032264.6|Gabarapl1|ENSMUSG00000030161.6|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm10_v2_chr17_+_28858411_28858499	1.47982	Foxa2_Foxa1	ENSMUST00000114737.1|Pnpla1|ENSMUSG00000043286.5|patatin-like phospholipase domain containing 1 	ENSMUST00000056866.5|Pnpla1|ENSMUSG00000043286.5|patatin-like phospholipase domain containing 1
mm10_v2_chrX_-_108664891_108664891	1.47123	Foxa2_Foxa1	ENSMUST00000178160.1|Gm379|ENSMUSG00000093916.1|predicted gene 379
mm10_v2_chr1_-_179546261_179546276	1.45293	Foxa2_Foxa1	ENSMUST00000027769.5|Tfb2m|ENSMUSG00000026492.5|transcription factor B2, mitochondrial
mm10_v2_chr11_+_32000452_32000470	1.42042	Foxa2_Foxa1	ENSMUST00000020537.2|Nsg2|ENSMUSG00000020297.4|neuron specific gene family member 2 	ENSMUST00000109409.1|Nsg2|ENSMUSG00000020297.4|neuron specific gene family member 2
mm10_v2_chr14_+_73237891_73238007	1.42039	Foxa2_Foxa1	ENSMUST00000044405.6|Lpar6|ENSMUSG00000033446.6|lysophosphatidic acid receptor 6
mm10_v2_chr1_+_87574016_87574046	1.4163	Foxa2_Foxa1	ENSMUST00000166259.1|Neu2|ENSMUSG00000079434.2|neuraminidase 2 	ENSMUST00000172222.1|Neu2|ENSMUSG00000079434.2|neuraminidase 2 	ENSMUST00000163606.1|Neu2|ENSMUSG00000079434.2|neuraminidase 2
mm10_v2_chr5_-_51567717_51567732	1.41604	Foxa2_Foxa1	ENSMUST00000127135.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha 	ENSMUST00000151104.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm10_v2_chr4_-_63154130_63154173	1.37685	Foxa2_Foxa1	ENSMUST00000030041.4|Ambp|ENSMUSG00000028356.4|alpha 1 microglobulin/bikunin
mm10_v2_chr6_+_34709610_34709635	1.36971	Foxa2_Foxa1	ENSMUST00000031775.6|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr2_+_158306493_158306653	1.3616	Foxa2_Foxa1	ENSMUST00000016168.2|Lbp|ENSMUSG00000016024.3|lipopolysaccharide binding protein 	ENSMUST00000109491.1|Lbp|ENSMUSG00000016024.3|lipopolysaccharide binding protein
mm10_v2_chr6_+_83743010_83743038	1.34081	Foxa2_Foxa1	ENSMUST00000006431.6|Atp6v1b1|ENSMUSG00000006269.6|ATPase, H+ transporting, lysosomal V1 subunit B1
mm10_v2_chr5_+_43515513_43515588	1.31993	Foxa2_Foxa1	ENSMUST00000167522.1|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7 	ENSMUST00000144558.1|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7 	ENSMUST00000076939.6|C1qtnf7|ENSMUSG00000061535.8|C1q and tumor necrosis factor related protein 7
mm10_v2_chrX_+_101376359_101376378	1.3145	Foxa2_Foxa1	ENSMUST00000119080.1|Gjb1|ENSMUSG00000047797.8|gap junction protein, beta 1
mm10_v2_chr10_+_128909866_128909873	1.26435	Foxa2_Foxa1	ENSMUST00000026407.7|Cd63|ENSMUSG00000025351.7|CD63 antigen
mm10_v2_chr8_-_84773381_84773427	1.25448	Foxa2_Foxa1	ENSMUST00000109764.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr9_+_55326913_55326958	1.25386	Foxa2_Foxa1	ENSMUST00000085754.3|AI118078|ENSMUSG00000032313.5|expressed sequence AI118078 	ENSMUST00000034862.4|AI118078|ENSMUSG00000032313.5|expressed sequence AI118078
mm10_v2_chr19_+_26623419_26623471	1.2484	Foxa2_Foxa1	ENSMUST00000176584.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr12_-_56613270_56613291	1.23617	Foxa2_Foxa1	ENSMUST00000072631.5|Nkx2-9|ENSMUSG00000058669.7|NK2 homeobox 9
mm10_v2_chr15_+_25940846_25940934	1.19992	Foxa2_Foxa1	ENSMUST00000110438.1|Fam134b|ENSMUSG00000022270.9|family with sequence similarity 134, member B
mm10_v2_chr2_+_27676440_27676454	1.18444	Foxa2_Foxa1	ENSMUST00000129514.1|Rxra|ENSMUSG00000015846.8|retinoid X receptor alpha
mm10_v2_chr10_+_87861309_87861338	1.18375	Foxa2_Foxa1	ENSMUST00000122100.1|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr16_-_63864114_63864182	1.17929	Foxa2_Foxa1	ENSMUST00000064405.6|Epha3|ENSMUSG00000052504.6|Eph receptor A3
mm10_v2_chr3_+_5218516_5218544	1.17711	Foxa2_Foxa1	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr19_-_58455398_58455458	1.175	Foxa2_Foxa1	ENSMUST00000026076.7|Gfra1|ENSMUSG00000025089.9|glial cell line derived neurotrophic factor family receptor alpha 1
mm10_v2_chr2_+_50066429_50066469	1.17128	Foxa2_Foxa1	ENSMUST00000112712.3|Lypd6|ENSMUSG00000050447.9|LY6/PLAUR domain containing 6 	ENSMUST00000128451.1|Lypd6|ENSMUSG00000050447.9|LY6/PLAUR domain containing 6 	ENSMUST00000053208.7|Lypd6|ENSMUSG00000050447.9|LY6/PLAUR domain containing 6
mm10_v2_chrX_+_150594420_150594478	1.16005	Foxa2_Foxa1	ENSMUST00000112713.2|Pfkfb1|ENSMUSG00000025271.7|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
mm10_v2_chr18_-_62756275_62756347	1.14824	Foxa2_Foxa1	ENSMUST00000067450.1|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene 	ENSMUST00000048109.5|2700046A07Rik|ENSMUSG00000041789.6|RIKEN cDNA 2700046A07 gene
mm10_v2_chr6_+_134830216_134830270	1.1185	Foxa2_Foxa1	ENSMUST00000111937.1|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chrX_-_94123087_94123159	1.10811	Foxa2_Foxa1	ENSMUST00000113925.1|Zfx|ENSMUSG00000079509.4|zinc finger protein X-linked
mm10_v2_chrX_-_139782353_139782368	1.10425	Foxa2_Foxa1	ENSMUST00000101217.3|Ripply1|ENSMUSG00000072945.3|ripply1 homolog (zebrafish)
mm10_v2_chr12_-_103863551_103863630	1.07158	Foxa2_Foxa1	ENSMUST00000085056.6|Serpina1a|ENSMUSG00000066366.8|serine (or cysteine) peptidase inhibitor, clade A, member 1A 	ENSMUST00000072876.5|Serpina1a|ENSMUSG00000066366.8|serine (or cysteine) peptidase inhibitor, clade A, member 1A 	ENSMUST00000124717.1|Serpina1a|ENSMUSG00000066366.8|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm10_v2_chr4_+_43669610_43669678	1.06845	Foxa2_Foxa1	ENSMUST00000107866.1|Tmem8b|ENSMUSG00000078716.3|transmembrane protein 8B
mm10_v2_chr1_+_132298606_132298631	1.05142	Foxa2_Foxa1	ENSMUST00000046071.4|Klhdc8a|ENSMUSG00000042115.4|kelch domain containing 8A
mm10_v2_chr2_+_4718145_4718205	1.04694	Foxa2_Foxa1	ENSMUST00000056914.6|Bend7|ENSMUSG00000048186.8|BEN domain containing 7
mm10_v2_chr15_-_5108492_5108565	1.04043	Foxa2_Foxa1	ENSMUST00000118365.2|Card6|ENSMUSG00000041849.7|caspase recruitment domain family, member 6
mm10_v2_chr16_-_95586585_95586595	1.03558	Foxa2_Foxa1	ENSMUST00000077773.6|Erg|ENSMUSG00000040732.12|avian erythroblastosis virus E-26 (v-ets) oncogene related
mm10_v2_chr18_-_84086379_84086404	1.03456	Foxa2_Foxa1	ENSMUST00000060303.8|Tshz1|ENSMUSG00000046982.9|teashirt zinc finger family member 1
mm10_v2_chr19_+_56461629_56461646	1.02316	Foxa2_Foxa1	ENSMUST00000178590.1|Plekhs1|ENSMUSG00000035818.7|pleckstrin homology domain containing, family S member 1 	ENSMUST00000039666.6|Plekhs1|ENSMUSG00000035818.7|pleckstrin homology domain containing, family S member 1
mm10_v2_chr6_-_136781718_136781806	1.01999	Foxa2_Foxa1	ENSMUST00000078095.6|Gucy2c|ENSMUSG00000042638.8|guanylate cyclase 2c 	ENSMUST00000032338.7|Gucy2c|ENSMUSG00000042638.8|guanylate cyclase 2c
mm10_v2_chr2_-_176917518_176917518	1.01737	Foxa2_Foxa1	ENSMUST00000108931.2|Gm14296|ENSMUSG00000074527.5|predicted gene 14296
mm10_v2_chr13_-_66227573_66227573	0.991844	Foxa2_Foxa1	ENSMUST00000167981.2|Gm10772|ENSMUSG00000091347.2|predicted gene 10772
mm10_v2_chr11_+_114851142_114851173	0.982973	Foxa2_Foxa1	ENSMUST00000133245.1|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C 	ENSMUST00000122967.2|Gprc5c|ENSMUSG00000051043.10|G protein-coupled receptor, family C, group 5, member C
mm10_v2_chr9_+_53850243_53850257	0.969038	Foxa2_Foxa1	ENSMUST00000048485.5|Sln|ENSMUSG00000042045.5|sarcolipin
mm10_v2_chr9_+_46228580_46228714	0.963084	Foxa2_Foxa1	ENSMUST00000034588.8|Apoa1|ENSMUSG00000032083.8|apolipoprotein A-I
mm10_v2_chr15_+_59648644_59648687	0.95869	Foxa2_Foxa1	ENSMUST00000118228.1|Trib1|ENSMUSG00000032501.8|tribbles homolog 1 (Drosophila)
mm10_v2_chr11_+_70092705_70092749	0.937539	Foxa2_Foxa1	ENSMUST00000124721.1|Asgr2|ENSMUSG00000040963.9|asialoglycoprotein receptor 2
mm10_v2_chr4_+_98546710_98546739	0.925858	Foxa2_Foxa1	ENSMUST00000102792.3|Inadl|ENSMUSG00000061859.10|InaD-like (Drosophila)
mm10_v2_chr5_-_86906937_86906955	0.919176	Foxa2_Foxa1	ENSMUST00000031181.9|Ugt2b34|ENSMUSG00000029260.9|UDP glucuronosyltransferase 2 family, polypeptide B34 	ENSMUST00000113333.1|Ugt2b34|ENSMUSG00000029260.9|UDP glucuronosyltransferase 2 family, polypeptide B34
mm10_v2_chr10_+_128908907_128908925	0.918817	Foxa2_Foxa1	ENSMUST00000105229.1|Cd63|ENSMUSG00000025351.7|CD63 antigen
mm10_v2_chr4_+_102254993_102255003	0.910315	Foxa2_Foxa1	ENSMUST00000106908.2|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr7_+_101317073_101317132	0.905805	Foxa2_Foxa1	ENSMUST00000163799.2|Stard10|ENSMUSG00000030688.8|START domain containing 10 	ENSMUST00000164479.2|Stard10|ENSMUSG00000030688.8|START domain containing 10
mm10_v2_chr15_+_59648350_59648369	0.903558	Foxa2_Foxa1	ENSMUST00000067543.6|Trib1|ENSMUSG00000032501.8|tribbles homolog 1 (Drosophila)
mm10_v2_chr11_+_70092634_70092644	0.895063	Foxa2_Foxa1	ENSMUST00000102572.1|Asgr2|ENSMUSG00000040963.9|asialoglycoprotein receptor 2
mm10_v2_chr2_+_72054598_72054640	0.885571	Foxa2_Foxa1	ENSMUST00000028525.5|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4
mm10_v2_chr12_+_38781093_38781129	0.876214	Foxa2_Foxa1	ENSMUST00000161513.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr13_-_12464925_12464949	0.853462	Foxa2_Foxa1	ENSMUST00000124888.1|Lgals8|ENSMUSG00000057554.7|lectin, galactose binding, soluble 8
mm10_v2_chr19_+_26749726_26749877	0.852196	Foxa2_Foxa1	ENSMUST00000175842.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr18_+_69925466_69925537	0.852	Foxa2_Foxa1	ENSMUST00000043929.4|Ccdc68|ENSMUSG00000038903.7|coiled-coil domain containing 68
mm10_v2_chr4_+_98546919_98546973	0.851751	Foxa2_Foxa1	ENSMUST00000030290.7|Inadl|ENSMUSG00000061859.10|InaD-like (Drosophila)
mm10_v2_chr11_+_70092653_70092698	0.850689	Foxa2_Foxa1	ENSMUST00000143772.1|Asgr2|ENSMUSG00000040963.9|asialoglycoprotein receptor 2
mm10_v2_chr12_+_119443410_119443410	0.843367	Foxa2_Foxa1	ENSMUST00000048880.6|Macc1|ENSMUSG00000041886.6|metastasis associated in colon cancer 1
mm10_v2_chr3_+_53041517_53041583	0.83499	Foxa2_Foxa1	ENSMUST00000059562.7|Lhfp|ENSMUSG00000048332.7|lipoma HMGIC fusion partner 	ENSMUST00000147139.1|Lhfp|ENSMUSG00000048332.7|lipoma HMGIC fusion partner
mm10_v2_chr18_+_69925542_69925576	0.828772	Foxa2_Foxa1	ENSMUST00000080050.5|Ccdc68|ENSMUSG00000038903.7|coiled-coil domain containing 68
mm10_v2_chr7_+_67655414_67655447	0.827784	Foxa2_Foxa1	ENSMUST00000107470.1|Ttc23|ENSMUSG00000030555.9|tetratricopeptide repeat domain 23
mm10_v2_chr8_-_45262012_45262057	0.815326	Foxa2_Foxa1	ENSMUST00000034064.3|F11|ENSMUSG00000031645.3|coagulation factor XI
mm10_v2_chr10_+_96616998_96617015	0.813847	Foxa2_Foxa1	ENSMUST00000038377.7|Btg1|ENSMUSG00000036478.7|B cell translocation gene 1, anti-proliferative
mm10_v2_chr5_+_16553488_16553550	0.805818	Foxa2_Foxa1	ENSMUST00000030683.3|Hgf|ENSMUSG00000028864.3|hepatocyte growth factor
mm10_v2_chr1_+_161494649_161494656	0.790298	Foxa2_Foxa1	ENSMUST00000086084.1|Tnfsf18|ENSMUSG00000066755.2|tumor necrosis factor (ligand) superfamily, member 18
mm10_v2_chr6_+_134830145_134830179	0.77818	Foxa2_Foxa1	ENSMUST00000046303.5|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chr11_+_115334731_115334849	0.768503	Foxa2_Foxa1	ENSMUST00000106543.1|Otop3|ENSMUSG00000018862.5|otopetrin 3 	ENSMUST00000019006.4|Otop3|ENSMUSG00000018862.5|otopetrin 3
mm10_v2_chr19_+_7056731_7056773	0.761849	Foxa2_Foxa1	ENSMUST00000040261.5|Macrod1|ENSMUSG00000036278.6|MACRO domain containing 1
mm10_v2_chr9_+_32224246_32224264	0.756405	Foxa2_Foxa1	ENSMUST00000168954.2|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr18_+_36528145_36528157	0.754578	Foxa2_Foxa1	ENSMUST00000074298.6|Slc4a9|ENSMUSG00000024485.9|solute carrier family 4, sodium bicarbonate cotransporter, member 9 	ENSMUST00000115694.2|Slc4a9|ENSMUSG00000024485.9|solute carrier family 4, sodium bicarbonate cotransporter, member 9
mm10_v2_chr16_-_38433145_38433175	0.747743	Foxa2_Foxa1	ENSMUST00000002926.6|Pla1a|ENSMUSG00000002847.6|phospholipase A1 member A
mm10_v2_chr13_+_31558157_31558176	0.746893	Foxa2_Foxa1	ENSMUST00000042118.8|Foxq1|ENSMUSG00000038415.8|forkhead box Q1
mm10_v2_chr4_+_97777606_97777632	0.745605	Foxa2_Foxa1	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr9_-_44802951_44802961	0.743702	Foxa2_Foxa1	ENSMUST00000044694.6|Ttc36|ENSMUSG00000039438.6|tetratricopeptide repeat domain 36
mm10_v2_chr3_-_69859875_69859901	0.743666	Foxa2_Foxa1	ENSMUST00000051239.7|Sptssb|ENSMUSG00000043461.7|serine palmitoyltransferase, small subunit B 	ENSMUST00000171529.1|Sptssb|ENSMUSG00000043461.7|serine palmitoyltransferase, small subunit B
mm10_v2_chr18_-_60648290_60648325	0.740365	Foxa2_Foxa1	ENSMUST00000143275.2|Synpo|ENSMUSG00000043079.11|synaptopodin
mm10_v2_chr8_-_121083085_121083153	0.736344	Foxa2_Foxa1	ENSMUST00000182264.1|Fendrr|ENSMUSG00000097336.2|Foxf1 adjacent non-coding developmental regulatory RNA
mm10_v2_chr7_-_65371210_65371287	0.735217	Foxa2_Foxa1	ENSMUST00000102592.3|Tjp1|ENSMUSG00000030516.8|tight junction protein 1
mm10_v2_chr1_+_156838915_156838978	0.731759	Foxa2_Foxa1	ENSMUST00000111720.1|Angptl1|ENSMUSG00000033544.6|angiopoietin-like 1
mm10_v2_chr7_+_28825202_28825217	0.730197	Foxa2_Foxa1	ENSMUST00000066264.6|Ech1|ENSMUSG00000053898.6|enoyl coenzyme A hydratase 1, peroxisomal
mm10_v2_chr3_+_27154020_27154031	0.722149	Foxa2_Foxa1	ENSMUST00000181124.1|1700125G22Rik|ENSMUSG00000097584.1|RIKEN cDNA 1700125G22 gene
mm10_v2_chr9_+_44398176_44398176	0.721569	Foxa2_Foxa1	ENSMUST00000165839.1|Slc37a4|ENSMUSG00000032114.8|solute carrier family 37 (glucose-6-phosphate transporter), member 4
mm10_v2_chr2_-_60722636_60722657	0.72103	Foxa2_Foxa1	ENSMUST00000028348.2|Itgb6|ENSMUSG00000026971.9|integrin beta 6 	ENSMUST00000112517.1|Itgb6|ENSMUSG00000026971.9|integrin beta 6
mm10_v2_chr18_-_3281036_3281132	0.714974	Foxa2_Foxa1	ENSMUST00000049942.6|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000139537.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator 	ENSMUST00000124747.1|Crem|ENSMUSG00000063889.10|cAMP responsive element modulator
mm10_v2_chr19_+_42090422_42090502	0.711601	Foxa2_Foxa1	ENSMUST00000066778.4|Pi4k2a|ENSMUSG00000025178.8|phosphatidylinositol 4-kinase type 2 alpha
mm10_v2_chr11_-_100146120_100146120	0.698846	Foxa2_Foxa1	ENSMUST00000007317.7|Krt19|ENSMUSG00000020911.8|keratin 19
mm10_v2_chr3_+_5218546_5218561	0.693638	Foxa2_Foxa1	ENSMUST00000026284.6|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr5_+_102481374_102481391	0.691721	Foxa2_Foxa1	ENSMUST00000094559.2|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24 	ENSMUST00000073302.5|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24
mm10_v2_chr4_+_11123950_11123980	0.686596	Foxa2_Foxa1	ENSMUST00000142297.1|Gm11827|ENSMUSG00000086765.1|predicted gene 11827
mm10_v2_chr3_-_82903963_82903981	0.68247	Foxa2_Foxa1	ENSMUST00000029632.6|Lrat|ENSMUSG00000028003.6|lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)
mm10_v2_chr17_+_29090969_29091020	0.681704	Foxa2_Foxa1	ENSMUST00000119901.1|Cdkn1a|ENSMUSG00000023067.7|cyclin-dependent kinase inhibitor 1A (P21)
mm10_v2_chr9_-_48835932_48835962	0.679808	Foxa2_Foxa1	ENSMUST00000093852.3|Zbtb16|ENSMUSG00000066687.4|zinc finger and BTB domain containing 16
mm10_v2_chr5_-_35679416_35679537	0.676848	Foxa2_Foxa1	ENSMUST00000114233.2|Htra3|ENSMUSG00000029096.9|HtrA serine peptidase 3
mm10_v2_chr5_-_66080971_66081009	0.670925	Foxa2_Foxa1	ENSMUST00000127275.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47 	ENSMUST00000113724.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47
mm10_v2_chr5_+_92809372_92809436	0.654514	Foxa2_Foxa1	ENSMUST00000113054.2|Shroom3|ENSMUSG00000029381.9|shroom family member 3
mm10_v2_chr11_+_70459611_70459633	0.654355	Foxa2_Foxa1	ENSMUST00000039093.3|Zmynd15|ENSMUSG00000040829.8|zinc finger, MYND-type containing 15
mm10_v2_chr9_+_32224457_32224592	0.651211	Foxa2_Foxa1	ENSMUST00000183121.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr11_-_99438143_99438159	0.647968	Foxa2_Foxa1	ENSMUST00000017743.2|Krt20|ENSMUSG00000035775.2|keratin 20
mm10_v2_chr6_+_97991776_97991792	0.641532	Foxa2_Foxa1	ENSMUST00000043628.6|Mitf|ENSMUSG00000035158.9|microphthalmia-associated transcription factor
mm10_v2_chr14_-_121915774_121915793	0.638376	Foxa2_Foxa1	ENSMUST00000055475.7|Gpr18|ENSMUSG00000050350.7|G protein-coupled receptor 18
mm10_v2_chr15_+_3270767_3271006	0.627785	Foxa2_Foxa1	ENSMUST00000082424.4|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159158.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000159216.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1 	ENSMUST00000160311.1|Sepp1|ENSMUSG00000064373.5|selenoprotein P, plasma, 1
mm10_v2_chr2_+_30595037_30595048	0.627632	Foxa2_Foxa1	ENSMUST00000102853.3|Cstad|ENSMUSG00000047363.4|CSA-conditional, T cell activation-dependent protein
mm10_v2_chr8_+_45658731_45658804	0.622513	Foxa2_Foxa1	ENSMUST00000143820.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000132139.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr7_-_100656953_100657103	0.622392	Foxa2_Foxa1	ENSMUST00000107046.1|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1 	ENSMUST00000107045.1|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1 	ENSMUST00000139708.1|Plekhb1|ENSMUSG00000030701.10|pleckstrin homology domain containing, family B (evectins) member 1
mm10_v2_chr8_-_125492710_125492710	0.620792	Foxa2_Foxa1	ENSMUST00000108775.1|Sipa1l2|ENSMUSG00000001995.8|signal-induced proliferation-associated 1 like 2
mm10_v2_chr4_+_102430047_102430079	0.614961	Foxa2_Foxa1	ENSMUST00000172616.1|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr11_-_33147400_33147448	0.610788	Foxa2_Foxa1	ENSMUST00000020507.7|Fgf18|ENSMUSG00000057967.6|fibroblast growth factor 18
mm10_v2_chr9_-_53536728_53536747	0.608309	Foxa2_Foxa1	ENSMUST00000118282.1|Atm|ENSMUSG00000034218.9|ataxia telangiectasia mutated homolog (human)
mm10_v2_chrX_+_169685191_169685250	0.602149	Foxa2_Foxa1	ENSMUST00000112104.1|Mid1|ENSMUSG00000035299.10|midline 1 	ENSMUST00000112107.1|Mid1|ENSMUSG00000035299.10|midline 1
mm10_v2_chr6_+_147032528_147032547	0.602108	Foxa2_Foxa1	ENSMUST00000036194.4|Rep15|ENSMUSG00000040121.4|RAB15 effector protein
mm10_v2_chr15_-_89170688_89170688	0.597109	Foxa2_Foxa1	ENSMUST00000060808.9|Plxnb2|ENSMUSG00000036606.10|plexin B2
mm10_v2_chr18_-_6135888_6135999	0.59018	Foxa2_Foxa1	ENSMUST00000182383.1|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12 	ENSMUST00000062584.7|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12 	ENSMUST00000077128.6|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12 	ENSMUST00000182038.1|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12 	ENSMUST00000182213.1|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12
mm10_v2_chr12_+_7977640_7977779	0.582687	Foxa2_Foxa1	ENSMUST00000171271.1|Apob|ENSMUSG00000020609.8|apolipoprotein B 	ENSMUST00000037811.6|Apob|ENSMUSG00000020609.8|apolipoprotein B 	ENSMUST00000037520.7|Apob|ENSMUSG00000020609.8|apolipoprotein B
mm10_v2_chr3_+_83007850_83007868	0.582585	Foxa2_Foxa1	ENSMUST00000048486.7|Fgg|ENSMUSG00000033860.8|fibrinogen gamma chain
mm10_v2_chr7_+_113766119_113766199	0.561167	Foxa2_Foxa1	ENSMUST00000084696.4|Spon1|ENSMUSG00000038156.9|spondin 1, (f-spondin) extracellular matrix protein
mm10_v2_chr3_+_5218589_5218614	0.548172	Foxa2_Foxa1	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr10_-_93310963_93310989	0.543477	Foxa2_Foxa1	ENSMUST00000151153.1|Elk3|ENSMUSG00000008398.8|ELK3, member of ETS oncogene family
mm10_v2_chr3_-_108889706_108889808	0.542347	Foxa2_Foxa1	ENSMUST00000180063.1|Fndc7|ENSMUSG00000045326.7|fibronectin type III domain containing 7
mm10_v2_chr6_+_48895243_48895264	0.540978	Foxa2_Foxa1	ENSMUST00000031835.7|Aoc1|ENSMUSG00000029811.8|amine oxidase, copper-containing 1
mm10_v2_chrX_+_94234594_94234604	0.54085	Foxa2_Foxa1	ENSMUST00000153900.1|Klhl15|ENSMUSG00000043929.10|kelch-like 15
mm10_v2_chr11_+_70459940_70460137	0.526173	Foxa2_Foxa1	ENSMUST00000147289.1|Zmynd15|ENSMUSG00000040829.8|zinc finger, MYND-type containing 15 	ENSMUST00000126105.1|Zmynd15|ENSMUSG00000040829.8|zinc finger, MYND-type containing 15
mm10_v2_chr11_-_70459957_70459984	0.524132	Foxa2_Foxa1	ENSMUST00000019064.2|Cxcl16|ENSMUSG00000018920.5|chemokine (C-X-C motif) ligand 16
mm10_v2_chr5_+_102481546_102481560	0.519371	Foxa2_Foxa1	ENSMUST00000112854.1|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24
mm10_v2_chr3_-_46447939_46447980	0.506819	Foxa2_Foxa1	ENSMUST00000166505.1|Pabpc4l|ENSMUSG00000090919.1|poly(A) binding protein, cytoplasmic 4-like
mm10_v2_chr2_-_104742802_104742878	0.505692	Foxa2_Foxa1	ENSMUST00000028595.7|Depdc7|ENSMUSG00000027173.7|DEP domain containing 7
mm10_v2_chr1_+_40580227_40580302	0.502078	Foxa2_Foxa1	ENSMUST00000027233.7|Slc9a4|ENSMUSG00000026065.7|solute carrier family 9 (sodium/hydrogen exchanger), member 4
mm10_v2_chr5_+_75152274_75152297	0.496228	Foxa2_Foxa1	ENSMUST00000000476.8|Pdgfra|ENSMUSG00000029231.9|platelet derived growth factor receptor, alpha polypeptide
mm10_v2_chr16_+_43363855_43363888	0.495927	Foxa2_Foxa1	ENSMUST00000156367.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr10_-_13388830_13388970	0.490428	Foxa2_Foxa1	ENSMUST00000079698.5|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr8_-_8639363_8639363	0.479159	Foxa2_Foxa1	ENSMUST00000152698.1|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr6_-_52183828_52183855	0.47622	Foxa2_Foxa1	ENSMUST00000134831.1|Hoxa3|ENSMUSG00000079560.7|homeobox A3
mm10_v2_chr2_-_90479165_90479178	0.467569	Foxa2_Foxa1	ENSMUST00000111495.2|Ptprj|ENSMUSG00000025314.10|protein tyrosine phosphatase, receptor type, J
mm10_v2_chr9_+_43744399_43744576	0.463353	Foxa2_Foxa1	ENSMUST00000034510.7|Pvrl1|ENSMUSG00000032012.7|poliovirus receptor-related 1
mm10_v2_chr6_-_59024470_59024549	0.459827	Foxa2_Foxa1	ENSMUST00000089860.5|Fam13a|ENSMUSG00000037709.7|family with sequence similarity 13, member A
mm10_v2_chr16_-_59632520_59632541	0.457179	Foxa2_Foxa1	ENSMUST00000118438.1|Arl6|ENSMUSG00000022722.12|ADP-ribosylation factor-like 6
mm10_v2_chr8_+_45658666_45658728	0.456315	Foxa2_Foxa1	ENSMUST00000134675.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000139869.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000126067.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr5_-_66054499_66054561	0.456113	Foxa2_Foxa1	ENSMUST00000145625.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47
mm10_v2_chr4_+_148602527_148602583	0.448388	Foxa2_Foxa1	ENSMUST00000105701.2|Masp2|ENSMUSG00000028979.11|mannan-binding lectin serine peptidase 2 	ENSMUST00000052060.6|Masp2|ENSMUSG00000028979.11|mannan-binding lectin serine peptidase 2
mm10_v2_chr11_+_85832551_85832551	0.442473	Foxa2_Foxa1	ENSMUST00000000095.6|Tbx2|ENSMUSG00000000093.6|T-box 2
mm10_v2_chr12_+_77238093_77238122	0.434195	Foxa2_Foxa1	ENSMUST00000177595.1|Fut8|ENSMUSG00000021065.9|fucosyltransferase 8 	ENSMUST00000171770.2|Fut8|ENSMUSG00000021065.9|fucosyltransferase 8
mm10_v2_chr6_-_13677930_13677974	0.416132	Foxa2_Foxa1	ENSMUST00000045235.5|B630005N14Rik|ENSMUSG00000042742.5|RIKEN cDNA B630005N14 gene
mm10_v2_chr7_+_19359740_19359770	0.415077	Foxa2_Foxa1	ENSMUST00000140836.1|Ppp1r13l|ENSMUSG00000040734.8|protein phosphatase 1, regulatory (inhibitor) subunit 13 like
mm10_v2_chr10_+_39732099_39732140	0.407772	Foxa2_Foxa1	ENSMUST00000019986.6|Rev3l|ENSMUSG00000019841.9|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm10_v2_chr19_+_8617991_8618000	0.403884	Foxa2_Foxa1	ENSMUST00000010250.2|Slc22a6|ENSMUSG00000024650.4|solute carrier family 22 (organic anion transporter), member 6
mm10_v2_chr4_+_97777780_97777834	0.402363	Foxa2_Foxa1	ENSMUST00000107062.2|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000052018.5|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000107057.1|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr19_+_26750939_26750967	0.397736	Foxa2_Foxa1	ENSMUST00000175953.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr13_+_94173992_94174027	0.397454	Foxa2_Foxa1	ENSMUST00000121618.1|Lhfpl2|ENSMUSG00000045312.5|lipoma HMGIC fusion partner-like 2
mm10_v2_chr12_+_38780284_38780349	0.391622	Foxa2_Foxa1	ENSMUST00000162563.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000161164.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1 	ENSMUST00000160996.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chrX_+_151198078_151198140	0.390153	Foxa2_Foxa1	ENSMUST00000184730.1|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3 	ENSMUST00000184392.1|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3 	ENSMUST00000096285.4|Wnk3|ENSMUSG00000041245.7|WNK lysine deficient protein kinase 3
mm10_v2_chr19_+_44992127_44992136	0.383737	Foxa2_Foxa1	ENSMUST00000179305.1|Sema4g|ENSMUSG00000025207.9|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm10_v2_chr19_+_38264761_38264831	0.381799	Foxa2_Foxa1	ENSMUST00000087252.5|Lgi1|ENSMUSG00000067242.5|leucine-rich repeat LGI family, member 1
mm10_v2_chr12_-_108003414_108003571	0.379915	Foxa2_Foxa1	ENSMUST00000109887.1|Bcl11b|ENSMUSG00000048251.9|B cell leukemia/lymphoma 11B 	ENSMUST00000109891.2|Bcl11b|ENSMUSG00000048251.9|B cell leukemia/lymphoma 11B
mm10_v2_chr3_-_122984404_122984512	0.375996	Foxa2_Foxa1	ENSMUST00000090379.2|Usp53|ENSMUSG00000039701.7|ubiquitin specific peptidase 53
mm10_v2_chr10_+_57645861_57645886	0.368408	Foxa2_Foxa1	ENSMUST00000177473.1|Pkib|ENSMUSG00000019876.9|protein kinase inhibitor beta, cAMP dependent, testis specific
mm10_v2_chr1_-_87573825_87573871	0.367004	Foxa2_Foxa1	ENSMUST00000068681.5|Ngef|ENSMUSG00000026259.8|neuronal guanine nucleotide exchange factor
mm10_v2_chr16_+_7069825_7069846	0.356873	Foxa2_Foxa1	ENSMUST00000056416.7|Rbfox1|ENSMUSG00000008658.9|RNA binding protein, fox-1 homolog (C. elegans) 1
mm10_v2_chr17_-_34628380_34628510	0.356612	Foxa2_Foxa1	ENSMUST00000167097.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2
mm10_v2_chr7_-_73375722_73375744	0.355645	Foxa2_Foxa1	ENSMUST00000181299.1|A730056A06Rik|ENSMUSG00000097756.1|RIKEN cDNA A730056A06 gene
mm10_v2_chr10_-_93311073_93311161	0.354109	Foxa2_Foxa1	ENSMUST00000008542.5|Elk3|ENSMUSG00000008398.8|ELK3, member of ETS oncogene family
mm10_v2_chr17_+_68837062_68837136	0.347142	Foxa2_Foxa1	ENSMUST00000178545.1|Tmem200c|ENSMUSG00000095407.1|transmembrane protein 200C
mm10_v2_chr1_-_170110491_170110532	0.345061	Foxa2_Foxa1	ENSMUST00000027985.2|Ddr2|ENSMUSG00000026674.3|discoidin domain receptor family, member 2
mm10_v2_chr7_+_130692532_130692575	0.341362	Foxa2_Foxa1	ENSMUST00000033141.6|Tacc2|ENSMUSG00000030852.9|transforming, acidic coiled-coil containing protein 2
mm10_v2_chr14_+_84443553_84443568	0.337569	Foxa2_Foxa1	ENSMUST00000071370.5|Pcdh17|ENSMUSG00000035566.6|protocadherin 17
mm10_v2_chr2_+_76675265_76675287	0.331031	Foxa2_Foxa1	ENSMUST00000111920.1|Plekha3|ENSMUSG00000002733.8|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
mm10_v2_chr16_+_17331371_17331427	0.322913	Foxa2_Foxa1	ENSMUST00000023450.6|Serpind1|ENSMUSG00000022766.6|serine (or cysteine) peptidase inhibitor, clade D, member 1 	ENSMUST00000161034.1|Serpind1|ENSMUSG00000022766.6|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm10_v2_chr14_+_48120841_48120869	0.321441	Foxa2_Foxa1	ENSMUST00000073150.4|Peli2|ENSMUSG00000021846.8|pellino 2
mm10_v2_chr2_-_51973219_51973234	0.320654	Foxa2_Foxa1	ENSMUST00000028314.2|Nmi|ENSMUSG00000026946.3|N-myc (and STAT) interactor
mm10_v2_chr18_+_65580230_65580400	0.318425	Foxa2_Foxa1	ENSMUST00000049016.5|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532 	ENSMUST00000183236.1|Zfp532|ENSMUSG00000042439.6|zinc finger protein 532
mm10_v2_chr13_-_60177357_60177373	0.311149	Foxa2_Foxa1	ENSMUST00000065086.4|Gas1|ENSMUSG00000052957.7|growth arrest specific 1
mm10_v2_chr11_+_4883186_4883222	0.302216	Foxa2_Foxa1	ENSMUST00000139737.1|Nipsnap1|ENSMUSG00000034285.9|4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)
mm10_v2_chr12_+_38780817_38780854	0.299047	Foxa2_Foxa1	ENSMUST00000160856.1|Etv1|ENSMUSG00000004151.10|ets variant gene 1
mm10_v2_chr18_+_70472660_70472675	0.29157	Foxa2_Foxa1	ENSMUST00000174118.1|Stard6|ENSMUSG00000079608.4|StAR-related lipid transfer (START) domain containing 6
mm10_v2_chr11_+_83662579_83662594	0.285601	Foxa2_Foxa1	ENSMUST00000019074.3|Ccl4|ENSMUSG00000018930.3|chemokine (C-C motif) ligand 4
mm10_v2_chr12_-_99393010_99393090	0.282021	Foxa2_Foxa1	ENSMUST00000177451.1|Foxn3|ENSMUSG00000033713.5|forkhead box N3
mm10_v2_chr10_+_41303968_41303980	0.281835	Foxa2_Foxa1	ENSMUST00000173517.2|Ak9|ENSMUSG00000091415.4|adenylate kinase 9
mm10_v2_chr11_+_87699897_87699897	0.281246	Foxa2_Foxa1	ENSMUST00000040089.4|Rnf43|ENSMUSG00000034177.9|ring finger protein 43
mm10_v2_chr16_+_24448082_24448153	0.279348	Foxa2_Foxa1	ENSMUST00000078988.2|Lpp|ENSMUSG00000033306.8|LIM domain containing preferred translocation partner in lipoma
mm10_v2_chr17_-_36642661_36642666	0.276663	Foxa2_Foxa1	ENSMUST00000087165.4|H2-M9|ENSMUSG00000067201.5|histocompatibility 2, M region locus 9 	ENSMUST00000087167.4|H2-M9|ENSMUSG00000067201.5|histocompatibility 2, M region locus 9
mm10_v2_chr13_+_113342548_113342548	0.275069	Foxa2_Foxa1	ENSMUST00000078163.7|BC067074|ENSMUSG00000021763.10|cDNA sequence BC067074
mm10_v2_chr7_-_80403315_80403339	0.27091	Foxa2_Foxa1	ENSMUST00000147150.1|Furin|ENSMUSG00000030530.9|furin (paired basic amino acid cleaving enzyme)
mm10_v2_chr6_-_87851011_87851060	0.26823	Foxa2_Foxa1	ENSMUST00000113617.1|Cnbp|ENSMUSG00000030057.9|cellular nucleic acid binding protein
mm10_v2_chr14_-_51256112_51256112	0.263601	Foxa2_Foxa1	ENSMUST00000061936.6|Ear11|ENSMUSG00000047222.6|eosinophil-associated, ribonuclease A family, member 11
mm10_v2_chr18_-_6136057_6136098	0.258623	Foxa2_Foxa1	ENSMUST00000182559.1|Arhgap12|ENSMUSG00000041225.10|Rho GTPase activating protein 12
mm10_v2_chr18_+_51117754_51117898	0.258016	Foxa2_Foxa1	ENSMUST00000116639.2|Prr16|ENSMUSG00000073565.4|proline rich 16
mm10_v2_chr1_+_165485168_165485206	0.254417	Foxa2_Foxa1	ENSMUST00000111440.1|Adcy10|ENSMUSG00000026567.10|adenylate cyclase 10 	ENSMUST00000027852.8|Adcy10|ENSMUSG00000026567.10|adenylate cyclase 10 	ENSMUST00000111439.1|Adcy10|ENSMUSG00000026567.10|adenylate cyclase 10
mm10_v2_chr6_+_34709442_34709497	0.253525	Foxa2_Foxa1	ENSMUST00000115021.1|Cald1|ENSMUSG00000029761.10|caldesmon 1
mm10_v2_chr8_-_121944886_121944908	0.251973	Foxa2_Foxa1	ENSMUST00000057653.7|Car5a|ENSMUSG00000025317.7|carbonic anhydrase 5a, mitochondrial
mm10_v2_chr19_-_19111181_19111203	0.250067	Foxa2_Foxa1	ENSMUST00000112832.1|Rorb|ENSMUSG00000036192.9|RAR-related orphan receptor beta
mm10_v2_chr5_-_87482258_87482283	0.24281	Foxa2_Foxa1	ENSMUST00000079811.6|Ugt2a1|ENSMUSG00000029268.8|UDP glucuronosyltransferase 2 family, polypeptide A1 	ENSMUST00000144144.1|Ugt2a1|ENSMUSG00000029268.8|UDP glucuronosyltransferase 2 family, polypeptide A1
mm10_v2_chr12_-_57546121_57546141	0.242793	Foxa2_Foxa1	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr11_+_96929367_96929394	0.238882	Foxa2_Foxa1	ENSMUST00000062172.5|Prr15l|ENSMUSG00000047040.9|proline rich 15-like
mm10_v2_chrX_+_56786527_56786564	0.236676	Foxa2_Foxa1	ENSMUST00000144600.1|Fhl1|ENSMUSG00000023092.10|four and a half LIM domains 1
mm10_v2_chr1_+_93373874_93373899	0.230475	Foxa2_Foxa1	ENSMUST00000058682.4|Ano7|ENSMUSG00000034107.4|anoctamin 7
mm10_v2_chr7_+_44849581_44849629	0.229353	Foxa2_Foxa1	ENSMUST00000150335.1|Akt1s1|ENSMUSG00000011096.10|AKT1 substrate 1 (proline-rich) 	ENSMUST00000107882.1|Akt1s1|ENSMUSG00000011096.10|AKT1 substrate 1 (proline-rich)
mm10_v2_chr11_+_105092194_105092206	0.226345	Foxa2_Foxa1	ENSMUST00000021029.5|Efcab3|ENSMUSG00000020690.6|EF-hand calcium binding domain 3
mm10_v2_chr5_-_92348871_92348889	0.219128	Foxa2_Foxa1	ENSMUST00000038816.6|Cxcl10|ENSMUSG00000034855.7|chemokine (C-X-C motif) ligand 10 	ENSMUST00000118006.1|Cxcl10|ENSMUSG00000034855.7|chemokine (C-X-C motif) ligand 10
mm10_v2_chr12_-_100725028_100725081	0.218889	Foxa2_Foxa1	ENSMUST00000043599.6|Rps6ka5|ENSMUSG00000021180.8|ribosomal protein S6 kinase, polypeptide 5
mm10_v2_chr15_+_4727202_4727230	0.216784	Foxa2_Foxa1	ENSMUST00000161997.1|C6|ENSMUSG00000022181.9|complement component 6 	ENSMUST00000022788.8|C6|ENSMUSG00000022181.9|complement component 6
mm10_v2_chr1_+_59482133_59482179	0.215565	Foxa2_Foxa1	ENSMUST00000114246.2|Fzd7|ENSMUSG00000041075.7|frizzled homolog 7 (Drosophila) 	ENSMUST00000037105.6|Fzd7|ENSMUSG00000041075.7|frizzled homolog 7 (Drosophila)
mm10_v2_chr1_-_166409773_166409863	0.214047	Foxa2_Foxa1	ENSMUST00000135673.1|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain 	ENSMUST00000079972.6|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain 	ENSMUST00000169324.1|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain 	ENSMUST00000111411.2|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain 	ENSMUST00000128861.1|Pogk|ENSMUSG00000040596.9|pogo transposable element with KRAB domain
mm10_v2_chr2_+_153291404_153291459	0.213766	Foxa2_Foxa1	ENSMUST00000028977.6|Kif3b|ENSMUSG00000027475.9|kinesin family member 3B
mm10_v2_chr12_-_31499541_31499616	0.213318	Foxa2_Foxa1	ENSMUST00000101499.3|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000064240.6|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000085487.5|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1
mm10_v2_chr1_-_138619687_138619759	0.209006	Foxa2_Foxa1	ENSMUST00000027642.2|Nek7|ENSMUSG00000026393.4|NIMA (never in mitosis gene a)-related expressed kinase 7
mm10_v2_chr2_-_51972990_51973022	0.20799	Foxa2_Foxa1	ENSMUST00000145481.1|Nmi|ENSMUSG00000026946.3|N-myc (and STAT) interactor 	ENSMUST00000112705.2|Nmi|ENSMUSG00000026946.3|N-myc (and STAT) interactor
mm10_v2_chr16_+_37868383_37868481	0.203499	Foxa2_Foxa1	ENSMUST00000078717.6|Lrrc58|ENSMUSG00000034158.9|leucine rich repeat containing 58
mm10_v2_chr12_-_73113407_73113456	0.203137	Foxa2_Foxa1	ENSMUST00000175693.1|Six4|ENSMUSG00000034460.8|sine oculis-related homeobox 4
mm10_v2_chr2_-_90904827_90904940	0.198615	Foxa2_Foxa1	ENSMUST00000005647.3|Ndufs3|ENSMUSG00000005510.3|NADH dehydrogenase (ubiquinone) Fe-S protein 3
mm10_v2_chr2_-_154613425_154613444	0.197635	Foxa2_Foxa1	ENSMUST00000181369.1|4930519P11Rik|ENSMUSG00000097602.1|RIKEN cDNA 4930519P11 gene
mm10_v2_chr8_+_69300776_69300776	0.188365	Foxa2_Foxa1	ENSMUST00000078257.6|D130040H23Rik|ENSMUSG00000079038.2|RIKEN cDNA D130040H23 gene
mm10_v2_chr19_-_38043559_38043600	0.186165	Foxa2_Foxa1	ENSMUST00000041475.8|Myof|ENSMUSG00000048612.9|myoferlin 	ENSMUST00000172095.2|Myof|ENSMUSG00000048612.9|myoferlin
mm10_v2_chr18_-_47333311_47333373	0.185193	Foxa2_Foxa1	ENSMUST00000126684.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000156422.1|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr3_-_146596588_146596612	0.181937	Foxa2_Foxa1	ENSMUST00000029836.4|Dnase2b|ENSMUSG00000028185.8|deoxyribonuclease II beta
mm10_v2_chr8_-_47713920_47713938	0.180004	Foxa2_Foxa1	ENSMUST00000038738.5|Cdkn2aip|ENSMUSG00000038069.5|CDKN2A interacting protein
mm10_v2_chr7_+_44848991_44849114	0.177165	Foxa2_Foxa1	ENSMUST00000107885.1|Akt1s1|ENSMUSG00000011096.10|AKT1 substrate 1 (proline-rich)
mm10_v2_chr14_+_13454010_13454123	0.17578	Foxa2_Foxa1	ENSMUST00000112656.2|Synpr|ENSMUSG00000056296.10|synaptoporin
mm10_v2_chr10_-_13388753_13388774	0.173462	Foxa2_Foxa1	ENSMUST00000105546.1|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr10_-_67285180_67285316	0.172275	Foxa2_Foxa1	ENSMUST00000159002.1|Nrbf2|ENSMUSG00000075000.5|nuclear receptor binding factor 2 	ENSMUST00000077839.6|Nrbf2|ENSMUSG00000075000.5|nuclear receptor binding factor 2
mm10_v2_chr5_-_5265224_5265309	0.172008	Foxa2_Foxa1	ENSMUST00000115450.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr16_-_26526744_26526774	0.169597	Foxa2_Foxa1	ENSMUST00000165687.1|Tmem207|ENSMUSG00000091972.1|transmembrane protein 207
mm10_v2_chr15_+_4375462_4375511	0.168759	Foxa2_Foxa1	ENSMUST00000061925.4|Plcxd3|ENSMUSG00000049148.8|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm10_v2_chr3_-_127408937_127408981	0.166301	Foxa2_Foxa1	ENSMUST00000183095.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain 	ENSMUST00000182610.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr2_+_90904740_90904778	0.163191	Foxa2_Foxa1	ENSMUST00000111464.1|Kbtbd4|ENSMUSG00000005505.6|kelch repeat and BTB (POZ) domain containing 4 	ENSMUST00000090682.3|Kbtbd4|ENSMUSG00000005505.6|kelch repeat and BTB (POZ) domain containing 4
mm10_v2_chr9_+_60769602_60769602	0.162307	Foxa2_Foxa1	ENSMUST00000178191.1|1700036A12Rik|ENSMUSG00000095956.1|RIKEN cDNA 1700036A12 gene
mm10_v2_chr7_+_90426312_90426312	0.155023	Foxa2_Foxa1	ENSMUST00000061391.7|Ccdc89|ENSMUSG00000044362.7|coiled-coil domain containing 89
mm10_v2_chr7_+_30565410_30565432	0.14212	Foxa2_Foxa1	ENSMUST00000043850.7|Igflr1|ENSMUSG00000036826.8|IGF-like family receptor 1
mm10_v2_chrX_+_136707976_136708040	0.141224	Foxa2_Foxa1	ENSMUST00000055104.5|Tceal1|ENSMUSG00000049536.5|transcription elongation factor A (SII)-like 1
mm10_v2_chr10_+_99263224_99263240	0.134305	Foxa2_Foxa1	ENSMUST00000020118.4|Dusp6|ENSMUSG00000019960.7|dual specificity phosphatase 6
mm10_v2_chr2_-_18048784_18048822	0.133627	Foxa2_Foxa1	ENSMUST00000142856.1|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr2_-_153871076_153871104	0.129314	Foxa2_Foxa1	ENSMUST00000028982.4|Sun5|ENSMUSG00000027480.6|Sad1 and UNC84 domain containing 5
mm10_v2_chr3_+_103074035_103074053	0.127265	Foxa2_Foxa1	ENSMUST00000176440.1|Ampd1|ENSMUSG00000070385.6|adenosine monophosphate deaminase 1
mm10_v2_chrX_+_94234921_94234972	0.127246	Foxa2_Foxa1	ENSMUST00000113908.1|Klhl15|ENSMUSG00000043929.10|kelch-like 15 	ENSMUST00000113916.3|Klhl15|ENSMUSG00000043929.10|kelch-like 15
mm10_v2_chr3_-_146770218_146770261	0.126931	Foxa2_Foxa1	ENSMUST00000106137.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr18_+_4920509_4920586	0.126872	Foxa2_Foxa1	ENSMUST00000126977.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr7_+_24271568_24271568	0.125974	Foxa2_Foxa1	ENSMUST00000032696.6|Zfp93|ENSMUSG00000055305.9|zinc finger protein 93
mm10_v2_chr3_-_146770603_146770781	0.123822	Foxa2_Foxa1	ENSMUST00000106138.1|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr2_+_120977017_120977107	0.117215	Foxa2_Foxa1	ENSMUST00000067582.7|Tmem62|ENSMUSG00000054484.8|transmembrane protein 62
mm10_v2_chr5_+_87925579_87925621	0.106372	Foxa2_Foxa1	ENSMUST00000001667.6|Csn3|ENSMUSG00000001622.9|casein kappa 	ENSMUST00000113267.1|Csn3|ENSMUSG00000001622.9|casein kappa
mm10_v2_chr10_-_57532416_57532487	0.103061	Foxa2_Foxa1	ENSMUST00000169122.1|Serinc1|ENSMUSG00000019877.4|serine incorporator 1
mm10_v2_chr14_-_24486994_24487064	0.0999283	Foxa2_Foxa1	ENSMUST00000026322.7|Polr3a|ENSMUSG00000025280.7|polymerase (RNA) III (DNA directed) polypeptide A
mm10_v2_chr14_-_32685246_32685312	0.0968407	Foxa2_Foxa1	ENSMUST00000096038.3|3425401B19Rik|ENSMUSG00000071540.3|RIKEN cDNA 3425401B19 gene
mm10_v2_chr10_+_57645834_57645857	0.0928215	Foxa2_Foxa1	ENSMUST00000177325.1|Pkib|ENSMUSG00000019876.9|protein kinase inhibitor beta, cAMP dependent, testis specific
mm10_v2_chr1_+_10056922_10056926	0.0921383	Foxa2_Foxa1	ENSMUST00000149214.1|Cspp1|ENSMUSG00000056763.10|centrosome and spindle pole associated protein 1
mm10_v2_chr2_-_18048347_18048449	0.0920563	Foxa2_Foxa1	ENSMUST00000066885.5|Skida1|ENSMUSG00000054074.9|SKI/DACH domain containing 1
mm10_v2_chr2_+_160888101_160888113	0.0918123	Foxa2_Foxa1	ENSMUST00000109455.2|Lpin3|ENSMUSG00000027412.6|lipin 3 	ENSMUST00000040872.6|Lpin3|ENSMUSG00000027412.6|lipin 3
mm10_v2_chr4_-_56224520_56224544	0.0902773	Foxa2_Foxa1	ENSMUST00000128591.1|2310081O03Rik|ENSMUSG00000085020.1|RIKEN cDNA 2310081O03 gene
mm10_v2_chr6_+_14901344_14901364	0.0886387	Foxa2_Foxa1	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr18_-_61014199_61014261	0.0838573	Foxa2_Foxa1	ENSMUST00000025520.8|Slc6a7|ENSMUSG00000052026.7|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
mm10_v2_chr11_+_96929260_96929324	0.0791873	Foxa2_Foxa1	ENSMUST00000054311.5|Prr15l|ENSMUSG00000047040.9|proline rich 15-like 	ENSMUST00000107636.3|Prr15l|ENSMUSG00000047040.9|proline rich 15-like
mm10_v2_chr8_+_127064022_127064086	0.0784381	Foxa2_Foxa1	ENSMUST00000160272.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000079777.5|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans) 	ENSMUST00000162907.1|Pard3|ENSMUSG00000025812.11|par-3 (partitioning defective 3) homolog (C. elegans)
mm10_v2_chr4_-_127970951_127970951	0.0708664	Foxa2_Foxa1	ENSMUST00000030614.2|CK137956|ENSMUSG00000028813.2|cDNA sequence CK137956
mm10_v2_chr2_-_73892530_73892555	0.0694604	Foxa2_Foxa1	ENSMUST00000136958.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112010.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000128531.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112017.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr6_-_87851074_87851106	0.0684791	Foxa2_Foxa1	ENSMUST00000032138.8|Cnbp|ENSMUSG00000030057.9|cellular nucleic acid binding protein 	ENSMUST00000113619.1|Cnbp|ENSMUSG00000030057.9|cellular nucleic acid binding protein
mm10_v2_chr11_+_115824029_115824097	0.0669694	Foxa2_Foxa1	ENSMUST00000103032.4|Llgl2|ENSMUSG00000020782.12|lethal giant larvae homolog 2 (Drosophila) 	ENSMUST00000133250.1|Llgl2|ENSMUSG00000020782.12|lethal giant larvae homolog 2 (Drosophila) 	ENSMUST00000177736.1|Llgl2|ENSMUSG00000020782.12|lethal giant larvae homolog 2 (Drosophila)
mm10_v2_chr7_+_44849216_44849295	0.0614929	Foxa2_Foxa1	ENSMUST00000054343.8|Akt1s1|ENSMUSG00000011096.10|AKT1 substrate 1 (proline-rich)
mm10_v2_chr1_-_136960427_136960494	0.0602404	Foxa2_Foxa1	ENSMUST00000027649.7|Nr5a2|ENSMUSG00000026398.8|nuclear receptor subfamily 5, group A, member 2
mm10_v2_chr3_-_52104891_52104922	0.0592493	Foxa2_Foxa1	ENSMUST00000121440.1|Maml3|ENSMUSG00000061143.9|mastermind like 3 (Drosophila)
mm10_v2_chr1_-_156034826_156034880	0.0565144	Foxa2_Foxa1	ENSMUST00000141878.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1 	ENSMUST00000123705.1|Tor1aip1|ENSMUSG00000026466.10|torsin A interacting protein 1
mm10_v2_chrM_+_2743_2761	0.0530099	Foxa2_Foxa1	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr7_-_109960385_109960433	0.0520579	Foxa2_Foxa1	ENSMUST00000106722.1|Dennd5a|ENSMUSG00000035901.8|DENN/MADD domain containing 5A
mm10_v2_chr6_+_139843648_139843648	0.0485972	Foxa2_Foxa1	ENSMUST00000087657.6|Pik3c2g|ENSMUSG00000030228.9|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide
mm10_v2_chr4_-_103215147_103215201	0.0388685	Foxa2_Foxa1	ENSMUST00000150285.1|Slc35d1|ENSMUSG00000028521.11|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
mm10_v2_chr8_+_78213292_78213371	0.0339166	Foxa2_Foxa1	ENSMUST00000117845.1|Ttc29|ENSMUSG00000037101.10|tetratricopeptide repeat domain 29 	ENSMUST00000126172.1|Ttc29|ENSMUSG00000037101.10|tetratricopeptide repeat domain 29 	ENSMUST00000049395.8|Ttc29|ENSMUSG00000037101.10|tetratricopeptide repeat domain 29
mm10_v2_chr18_+_21072329_21072351	0.03126	Foxa2_Foxa1	ENSMUST00000082235.4|Mep1b|ENSMUSG00000024313.7|meprin 1 beta
mm10_v2_chr7_-_109960461_109960477	0.0220255	Foxa2_Foxa1	ENSMUST00000080437.6|Dennd5a|ENSMUSG00000035901.8|DENN/MADD domain containing 5A
mm10_v2_chr15_-_93519499_93519526	0.0213233	Foxa2_Foxa1	ENSMUST00000109255.2|Prickle1|ENSMUSG00000036158.6|prickle homolog 1 (Drosophila)
mm10_v2_chr2_-_121109795_121109795	0.012845	Foxa2_Foxa1	ENSMUST00000110675.1|Tgm7|ENSMUSG00000079103.2|transglutaminase 7
mm10_v2_chr4_-_56741423_56741435	0.00327994	Foxa2_Foxa1	ENSMUST00000095080.3|Actl7b|ENSMUSG00000070980.3|actin-like 7b
mm10_v2_chr9_-_53536608_53536693	0.00229736	Foxa2_Foxa1	ENSMUST00000150244.1|Atm|ENSMUSG00000034218.9|ataxia telangiectasia mutated homolog (human)
