mm10_v2_chr19_+_39287074_39287104	9.81719	Emx1_Emx2	ENSMUST00000003137.8|Cyp2c29|ENSMUSG00000003053.11|cytochrome P450, family 2, subfamily c, polypeptide 29
mm10_v2_chr3_-_81975742_81975760	6.65635	Emx1_Emx2	ENSMUST00000029645.8|Tdo2|ENSMUSG00000028011.10|tryptophan 2,3-dioxygenase
mm10_v2_chr7_-_68275098_68275120	6.20996	Emx1_Emx2	ENSMUST00000135564.1|Gm16157|ENSMUSG00000086628.1|predicted gene 16157
mm10_v2_chr19_-_39463067_39463081	5.12446	Emx1_Emx2	ENSMUST00000035488.2|Cyp2c38|ENSMUSG00000032808.2|cytochrome P450, family 2, subfamily c, polypeptide 38
mm10_v2_chr7_-_48848023_48848051	5.08291	Emx1_Emx2	ENSMUST00000032658.6|Csrp3|ENSMUSG00000030470.8|cysteine and glycine-rich protein 3
mm10_v2_chr17_-_36032682_36032855	4.60978	Emx1_Emx2	ENSMUST00000102678.4|H2-T23|ENSMUSG00000067212.8|histocompatibility 2, T region locus 23
mm10_v2_chr12_-_98577940_98578046	4.58559	Emx1_Emx2	ENSMUST00000110113.1|Kcnk10|ENSMUSG00000033854.9|potassium channel, subfamily K, member 10
mm10_v2_chr18_-_38866702_38866748	4.27613	Emx1_Emx2	ENSMUST00000115582.1|Fgf1|ENSMUSG00000036585.9|fibroblast growth factor 1
mm10_v2_chr4_-_61439743_61439743	4.20133	Emx1_Emx2	ENSMUST00000095049.4|Mup15|ENSMUSG00000096674.1|major urinary protein 15
mm10_v2_chr5_-_89457763_89457898	3.8964	Emx1_Emx2	ENSMUST00000049209.8|Gc|ENSMUSG00000035540.8|group specific component
mm10_v2_chr16_+_22918378_22918385	3.5419	Emx1_Emx2	ENSMUST00000170805.1|Fetub|ENSMUSG00000022871.6|fetuin beta
mm10_v2_chr17_-_31636631_31636790	3.00118	Emx1_Emx2	ENSMUST00000135425.1|Cbs|ENSMUSG00000024039.8|cystathionine beta-synthase 	ENSMUST00000151718.1|Cbs|ENSMUSG00000024039.8|cystathionine beta-synthase 	ENSMUST00000155814.1|Cbs|ENSMUSG00000024039.8|cystathionine beta-synthase
mm10_v2_chr1_+_130826762_130826888	2.74072	Emx1_Emx2	ENSMUST00000133792.1|Pigr|ENSMUSG00000026417.7|polymeric immunoglobulin receptor
mm10_v2_chr5_-_87337165_87337203	2.74038	Emx1_Emx2	ENSMUST00000031195.2|Ugt2a3|ENSMUSG00000035780.2|UDP glucuronosyltransferase 2 family, polypeptide A3
mm10_v2_chr4_-_82505707_82505739	2.6631	Emx1_Emx2	ENSMUST00000107248.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107247.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr7_+_27029074_27029090	2.60772	Emx1_Emx2	ENSMUST00000075552.5|Cyp2a12|ENSMUSG00000060407.5|cytochrome P450, family 2, subfamily a, polypeptide 12
mm10_v2_chr1_-_162898665_162898728	2.58352	Emx1_Emx2	ENSMUST00000111510.1|Fmo2|ENSMUSG00000040170.7|flavin containing monooxygenase 2 	ENSMUST00000045902.6|Fmo2|ENSMUSG00000040170.7|flavin containing monooxygenase 2
mm10_v2_chr2_-_67194695_67194736	2.51733	Emx1_Emx2	ENSMUST00000147939.1|Gm13598|ENSMUSG00000086908.1|predicted gene 13598
mm10_v2_chr1_-_162898484_162898498	2.50903	Emx1_Emx2	ENSMUST00000143123.1|Fmo2|ENSMUSG00000040170.7|flavin containing monooxygenase 2
mm10_v2_chr6_+_42245907_42245977	2.44785	Emx1_Emx2	ENSMUST00000031897.5|Gstk1|ENSMUSG00000029864.5|glutathione S-transferase kappa 1
mm10_v2_chr8_-_93363676_93363676	2.42394	Emx1_Emx2	ENSMUST00000145041.1|Ces1h|ENSMUSG00000074156.4|carboxylesterase 1H
mm10_v2_chr19_-_8218832_8218899	2.38449	Emx1_Emx2	ENSMUST00000113298.2|Slc22a29|ENSMUSG00000075044.5|solute carrier family 22. member 29
mm10_v2_chr4_-_82505274_82505358	2.38429	Emx1_Emx2	ENSMUST00000050872.8|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000064770.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr5_-_65428354_65428374	2.31049	Emx1_Emx2	ENSMUST00000131263.1|Ugdh|ENSMUSG00000029201.8|UDP-glucose dehydrogenase
mm10_v2_chr2_-_157566319_157566361	2.23621	Emx1_Emx2	ENSMUST00000109528.2|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human) 	ENSMUST00000088494.2|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human)
mm10_v2_chr11_+_109543694_109543754	2.02104	Emx1_Emx2	ENSMUST00000106696.1|Arsg|ENSMUSG00000020604.7|arylsulfatase G
mm10_v2_chr1_-_174921813_174921827	1.99575	Emx1_Emx2	ENSMUST00000055294.3|Grem2|ENSMUSG00000050069.3|gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)
mm10_v2_chr2_-_17460610_17460635	1.9044	Emx1_Emx2	ENSMUST00000145492.1|Nebl|ENSMUSG00000053702.10|nebulette
mm10_v2_chr1_-_139858684_139858729	1.87172	Emx1_Emx2	ENSMUST00000094489.3|Cfhr2|ENSMUSG00000033898.11|complement factor H-related 2
mm10_v2_chr4_-_82505749_82505802	1.85468	Emx1_Emx2	ENSMUST00000107245.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107246.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr5_+_45493374_45493437	1.85222	Emx1_Emx2	ENSMUST00000046122.6|Lap3|ENSMUSG00000039682.6|leucine aminopeptidase 3
mm10_v2_chr1_+_58113136_58113184	1.83176	Emx1_Emx2	ENSMUST00000040999.7|Aox3|ENSMUSG00000064294.6|aldehyde oxidase 3
mm10_v2_chr5_-_87535113_87535146	1.73808	Emx1_Emx2	ENSMUST00000120150.1|Sult1b1|ENSMUSG00000029269.5|sulfotransferase family 1B, member 1
mm10_v2_chr11_-_54249640_54249667	1.72221	Emx1_Emx2	ENSMUST00000019060.5|Csf2|ENSMUSG00000018916.5|colony stimulating factor 2 (granulocyte-macrophage)
mm10_v2_chr17_+_45734506_45734630	1.67964	Emx1_Emx2	ENSMUST00000180558.1|F630040K05Rik|ENSMUSG00000097727.1|RIKEN cDNA F630040K05 gene
mm10_v2_chr7_-_26939377_26939390	1.67289	Emx1_Emx2	ENSMUST00000170227.1|Cyp2a22|ENSMUSG00000091867.1|cytochrome P450, family 2, subfamily a, polypeptide 22
mm10_v2_chrX_-_8193387_8193512	1.54606	Emx1_Emx2	ENSMUST00000143223.1|Ebp|ENSMUSG00000031168.8|phenylalkylamine Ca2+ antagonist (emopamil) binding protein 	ENSMUST00000033509.8|Ebp|ENSMUSG00000031168.8|phenylalkylamine Ca2+ antagonist (emopamil) binding protein
mm10_v2_chr7_+_132610620_132610662	1.53444	Emx1_Emx2	ENSMUST00000033241.5|Lhpp|ENSMUSG00000030946.6|phospholysine phosphohistidine inorganic pyrophosphate phosphatase
mm10_v2_chr19_-_39649046_39649061	1.51261	Emx1_Emx2	ENSMUST00000067328.6|Cyp2c67|ENSMUSG00000062624.5|cytochrome P450, family 2, subfamily c, polypeptide 67
mm10_v2_chr7_+_44676965_44676965	1.49481	Emx1_Emx2	ENSMUST00000094460.1|2310016G11Rik|ENSMUSG00000070574.1|RIKEN cDNA 2310016G11 gene
mm10_v2_chr7_-_101845300_101845339	1.48792	Emx1_Emx2	ENSMUST00000094141.5|Folr2|ENSMUSG00000032725.9|folate receptor 2 (fetal)
mm10_v2_chr19_-_39812744_39812814	1.45706	Emx1_Emx2	ENSMUST00000162507.1|Cyp2c40|ENSMUSG00000025004.9|cytochrome P450, family 2, subfamily c, polypeptide 40 	ENSMUST00000160476.1|Cyp2c40|ENSMUSG00000025004.9|cytochrome P450, family 2, subfamily c, polypeptide 40
mm10_v2_chr9_-_15301555_15301607	1.44779	Emx1_Emx2	ENSMUST00000034414.8|4931406C07Rik|ENSMUSG00000031938.8|RIKEN cDNA 4931406C07 gene
mm10_v2_chr1_-_187215454_187215478	1.44523	Emx1_Emx2	ENSMUST00000183819.1|Spata17|ENSMUSG00000026611.11|spermatogenesis associated 17
mm10_v2_chr6_+_124304646_124304671	1.43708	Emx1_Emx2	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr11_+_99873389_99873389	1.3878	Emx1_Emx2	ENSMUST00000093936.3|Krtap9-1|ENSMUSG00000070335.3|keratin associated protein 9-1
mm10_v2_chr4_+_138879360_138879399	1.38659	Emx1_Emx2	ENSMUST00000105804.1|Pla2g2e|ENSMUSG00000028751.7|phospholipase A2, group IIE
mm10_v2_chr6_-_57535422_57535447	1.29198	Emx1_Emx2	ENSMUST00000042766.3|Ppm1k|ENSMUSG00000037826.3|protein phosphatase 1K (PP2C domain containing)
mm10_v2_chr5_-_3647806_3648009	1.28892	Emx1_Emx2	ENSMUST00000119783.1|Gatad1|ENSMUSG00000007415.9|GATA zinc finger domain containing 1 	ENSMUST00000007559.8|Gatad1|ENSMUSG00000007415.9|GATA zinc finger domain containing 1
mm10_v2_chr3_-_96452306_96452306	1.28385	Emx1_Emx2	ENSMUST00000093126.4|BC107364|ENSMUSG00000046317.8|cDNA sequence BC107364 	ENSMUST00000098841.3|BC107364|ENSMUSG00000046317.8|cDNA sequence BC107364
mm10_v2_chr2_+_30171486_30171497	1.26685	Emx1_Emx2	ENSMUST00000015481.5|Endog|ENSMUSG00000015337.5|endonuclease G
mm10_v2_chr13_-_120215213_120215213	1.248	Emx1_Emx2	ENSMUST00000177561.1|Gm21762|ENSMUSG00000094027.1|predicted gene, 21762
mm10_v2_chr18_-_73754457_73754503	1.23509	Emx1_Emx2	ENSMUST00000041138.2|Elac1|ENSMUSG00000036941.2|elaC homolog 1 (E. coli)
mm10_v2_chr6_+_129533183_129533205	1.21279	Emx1_Emx2	ENSMUST00000032264.6|Gabarapl1|ENSMUSG00000030161.6|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm10_v2_chr11_-_49113757_49113757	1.20366	Emx1_Emx2	ENSMUST00000060398.1|Olfr1396|ENSMUSG00000047511.2|olfactory receptor 1396
mm10_v2_chr3_+_57425314_57425452	1.19753	Emx1_Emx2	ENSMUST00000029377.7|Tm4sf4|ENSMUSG00000027801.7|transmembrane 4 superfamily member 4
mm10_v2_chr4_-_150914401_150914480	1.14232	Emx1_Emx2	ENSMUST00000105675.1|Park7|ENSMUSG00000028964.8|Parkinson disease (autosomal recessive, early onset) 7
mm10_v2_chr6_+_79818031_79818031	1.12857	Emx1_Emx2	ENSMUST00000179797.1|Gm20594|ENSMUSG00000096887.1|predicted gene, 20594
mm10_v2_chr9_+_78191966_78191999	1.12487	Emx1_Emx2	ENSMUST00000034903.5|Gsta4|ENSMUSG00000032348.5|glutathione S-transferase, alpha 4
mm10_v2_chr14_+_55560010_55560037	1.12205	Emx1_Emx2	ENSMUST00000147981.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11 	ENSMUST00000133256.1|Dcaf11|ENSMUSG00000022214.8|DDB1 and CUL4 associated factor 11
mm10_v2_chr3_+_127633134_127633140	1.1188	Emx1_Emx2	ENSMUST00000029587.7|Neurog2|ENSMUSG00000027967.7|neurogenin 2
mm10_v2_chr14_+_118137101_118137178	1.10586	Emx1_Emx2	ENSMUST00000022728.2|Gpr180|ENSMUSG00000022131.2|G protein-coupled receptor 180
mm10_v2_chr8_+_45507768_45507818	1.06939	Emx1_Emx2	ENSMUST00000067065.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000098788.3|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000067107.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000171337.2|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000138049.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000141039.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr2_-_5676046_5676065	1.06334	Emx1_Emx2	ENSMUST00000114987.3|Camk1d|ENSMUSG00000039145.10|calcium/calmodulin-dependent protein kinase ID
mm10_v2_chr1_+_93685574_93685694	1.05054	Emx1_Emx2	ENSMUST00000027499.6|Bok|ENSMUSG00000026278.8|BCL2-related ovarian killer protein
mm10_v2_chr14_+_69347587_69347587	1.03371	Emx1_Emx2	ENSMUST00000064831.5|Entpd4|ENSMUSG00000095463.2|ectonucleoside triphosphate diphosphohydrolase 4
mm10_v2_chr9_-_50746501_50746597	1.02432	Emx1_Emx2	ENSMUST00000034564.1|2310030G06Rik|ENSMUSG00000032062.1|RIKEN cDNA 2310030G06 gene
mm10_v2_chr16_-_44016387_44016436	1.02277	Emx1_Emx2	ENSMUST00000036174.3|Gramd1c|ENSMUSG00000036292.7|GRAM domain containing 1C
mm10_v2_chr13_-_4609122_4609189	1.01151	Emx1_Emx2	ENSMUST00000110691.3|Akr1e1|ENSMUSG00000045410.11|aldo-keto reductase family 1, member E1 	ENSMUST00000091848.5|Akr1e1|ENSMUSG00000045410.11|aldo-keto reductase family 1, member E1
mm10_v2_chr15_-_33687840_33687883	0.952939	Emx1_Emx2	ENSMUST00000042021.3|Tspyl5|ENSMUSG00000038984.3|testis-specific protein, Y-encoded-like 5
mm10_v2_chr18_-_66002612_66002637	0.93247	Emx1_Emx2	ENSMUST00000120461.1|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1 	ENSMUST00000048260.7|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1
mm10_v2_chr3_+_121953213_121953295	0.904269	Emx1_Emx2	ENSMUST00000037958.7|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29 	ENSMUST00000128366.1|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29
mm10_v2_chr11_+_97029925_97029997	0.890009	Emx1_Emx2	ENSMUST00000021249.4|Scrn2|ENSMUSG00000020877.5|secernin 2
mm10_v2_chr6_-_144209471_144209487	0.884376	Emx1_Emx2	ENSMUST00000038815.7|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr16_+_11406618_11406675	0.882022	Emx1_Emx2	ENSMUST00000122168.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr2_-_175703646_175703646	0.87997	Emx1_Emx2	ENSMUST00000109027.2|Gm4245|ENSMUSG00000095545.1|predicted gene 4245 	ENSMUST00000179061.1|Gm4245|ENSMUSG00000095545.1|predicted gene 4245 	ENSMUST00000131041.1|Gm4245|ENSMUSG00000095545.1|predicted gene 4245
mm10_v2_chr12_+_84285232_84285414	0.875085	Emx1_Emx2	ENSMUST00000123614.1|Ptgr2|ENSMUSG00000072946.6|prostaglandin reductase 2 	ENSMUST00000147363.1|Ptgr2|ENSMUSG00000072946.6|prostaglandin reductase 2 	ENSMUST00000135001.1|Ptgr2|ENSMUSG00000072946.6|prostaglandin reductase 2 	ENSMUST00000146377.1|Ptgr2|ENSMUSG00000072946.6|prostaglandin reductase 2
mm10_v2_chr6_-_144209448_144209469	0.870852	Emx1_Emx2	ENSMUST00000077160.5|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr14_-_8258800_8258832	0.870194	Emx1_Emx2	ENSMUST00000022271.7|Acox2|ENSMUSG00000021751.7|acyl-Coenzyme A oxidase 2, branched chain
mm10_v2_chr9_-_20728219_20728219	0.84493	Emx1_Emx2	ENSMUST00000034692.7|Olfm2|ENSMUSG00000032172.7|olfactomedin 2
mm10_v2_chr10_-_86011833_86011896	0.826944	Emx1_Emx2	ENSMUST00000105304.1|Bpifc|ENSMUSG00000050108.6|BPI fold containing family C 	ENSMUST00000061699.5|Bpifc|ENSMUSG00000050108.6|BPI fold containing family C
mm10_v2_chr7_-_5413145_5413145	0.813433	Emx1_Emx2	ENSMUST00000108569.2|Vmn1r58|ENSMUSG00000078808.4|vomeronasal 1 receptor 58
mm10_v2_chr2_+_175372436_175372492	0.809426	Emx1_Emx2	ENSMUST00000131676.1|Gm4723|ENSMUSG00000078898.3|predicted gene 4723 	ENSMUST00000109048.2|Gm4723|ENSMUSG00000078898.3|predicted gene 4723 	ENSMUST00000109047.2|Gm4723|ENSMUSG00000078898.3|predicted gene 4723
mm10_v2_chr6_-_144209558_144209647	0.784422	Emx1_Emx2	ENSMUST00000111749.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000170367.2|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr4_+_102589687_102589843	0.770146	Emx1_Emx2	ENSMUST00000097949.4|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific 	ENSMUST00000106901.1|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr9_+_72958785_72958850	0.766256	Emx1_Emx2	ENSMUST00000098567.2|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human) 	ENSMUST00000034734.8|Dyx1c1|ENSMUSG00000092192.1|dyslexia susceptibility 1 candidate 1 homolog (human)
mm10_v2_chr5_+_104202609_104202624	0.76257	Emx1_Emx2	ENSMUST00000066708.5|Dmp1|ENSMUSG00000029307.6|dentin matrix protein 1
mm10_v2_chr1_-_187215421_187215451	0.761476	Emx1_Emx2	ENSMUST00000110945.3|Spata17|ENSMUSG00000026611.11|spermatogenesis associated 17 	ENSMUST00000183931.1|Spata17|ENSMUSG00000026611.11|spermatogenesis associated 17 	ENSMUST00000027908.6|Spata17|ENSMUSG00000026611.11|spermatogenesis associated 17
mm10_v2_chr17_+_14943184_14943281	0.757843	Emx1_Emx2	ENSMUST00000052691.8|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene 	ENSMUST00000164837.2|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene 	ENSMUST00000174004.1|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene
mm10_v2_chr6_+_37870786_37870882	0.757122	Emx1_Emx2	ENSMUST00000120428.1|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24 	ENSMUST00000031859.7|Trim24|ENSMUSG00000029833.11|tripartite motif-containing 24
mm10_v2_chr16_-_59553970_59553970	0.754522	Emx1_Emx2	ENSMUST00000139989.1|Crybg3|ENSMUSG00000022723.9|beta-gamma crystallin domain containing 3
mm10_v2_chr2_+_93452796_93452833	0.735687	Emx1_Emx2	ENSMUST00000099693.2|Gm10804|ENSMUSG00000075025.4|predicted gene 10804 	ENSMUST00000162565.1|Gm10804|ENSMUSG00000075025.4|predicted gene 10804 	ENSMUST00000163052.1|Gm10804|ENSMUSG00000075025.4|predicted gene 10804
mm10_v2_chr2_+_144594054_144594083	0.73295	Emx1_Emx2	ENSMUST00000136628.1|Gm561|ENSMUSG00000074754.4|predicted gene 561
mm10_v2_chr19_-_39886730_39886769	0.732486	Emx1_Emx2	ENSMUST00000168838.1|Cyp2c69|ENSMUSG00000092008.1|cytochrome P450, family 2, subfamily c, polypeptide 69
mm10_v2_chr18_-_15403680_15403687	0.731884	Emx1_Emx2	ENSMUST00000079081.6|Aqp4|ENSMUSG00000024411.9|aquaporin 4
mm10_v2_chr14_-_96519067_96519102	0.694673	Emx1_Emx2	ENSMUST00000022666.7|Klhl1|ENSMUSG00000022076.9|kelch-like 1
mm10_v2_chrX_-_160994665_160994702	0.689554	Emx1_Emx2	ENSMUST00000087104.4|Cdkl5|ENSMUSG00000031292.8|cyclin-dependent kinase-like 5
mm10_v2_chr7_-_97738222_97738317	0.689547	Emx1_Emx2	ENSMUST00000084986.6|Aqp11|ENSMUSG00000042797.8|aquaporin 11
mm10_v2_chr14_-_18893376_18893420	0.688167	Emx1_Emx2	ENSMUST00000151926.1|Ube2e2|ENSMUSG00000058317.5|ubiquitin-conjugating enzyme E2E 2
mm10_v2_chr5_+_135009152_135009317	0.683008	Emx1_Emx2	ENSMUST00000111216.1|Abhd11|ENSMUSG00000040532.8|abhydrolase domain containing 11 	ENSMUST00000046999.8|Abhd11|ENSMUSG00000040532.8|abhydrolase domain containing 11
mm10_v2_chr14_-_51195923_51195923	0.67916	Emx1_Emx2	ENSMUST00000051274.1|Ang2|ENSMUSG00000047894.1|angiogenin, ribonuclease A family, member 2
mm10_v2_chr4_+_126609818_126609896	0.670807	Emx1_Emx2	ENSMUST00000097886.3|5730409E04Rik|ENSMUSG00000073755.4|RIKEN cDNA 5730409E04Rik gene 	ENSMUST00000164362.1|5730409E04Rik|ENSMUSG00000073755.4|RIKEN cDNA 5730409E04Rik gene
mm10_v2_chrX_+_57212110_57212143	0.67064	Emx1_Emx2	ENSMUST00000033466.1|Cd40lg|ENSMUSG00000031132.1|CD40 ligand
mm10_v2_chr13_-_23934156_23934225	0.666612	Emx1_Emx2	ENSMUST00000052776.2|Hist1h2ba|ENSMUSG00000050799.2|histone cluster 1, H2ba
mm10_v2_chr8_-_125898291_125898322	0.66328	Emx1_Emx2	ENSMUST00000047239.6|Pcnxl2|ENSMUSG00000060212.7|pecanex-like 2 (Drosophila)
mm10_v2_chr15_-_36496722_36496808	0.648244	Emx1_Emx2	ENSMUST00000057486.7|Ankrd46|ENSMUSG00000048307.7|ankyrin repeat domain 46
mm10_v2_chr11_+_17257558_17257688	0.639751	Emx1_Emx2	ENSMUST00000000594.2|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor 	ENSMUST00000156784.1|C1d|ENSMUSG00000000581.2|C1D nuclear receptor co-repressor
mm10_v2_chr6_-_123853190_123853190	0.617774	Emx1_Emx2	ENSMUST00000162046.1|Vmn2r25|ENSMUSG00000094672.1|vomeronasal 2, receptor 25
mm10_v2_chr6_-_117214048_117214048	0.61776	Emx1_Emx2	ENSMUST00000170447.1|Rpl28-ps4|ENSMUSG00000090549.1|ribosomal protein L28, pseudogene 4
mm10_v2_chr17_-_45686899_45686923	0.615586	Emx1_Emx2	ENSMUST00000156254.1|Tmem63b|ENSMUSG00000036026.9|transmembrane protein 63b
mm10_v2_chr7_-_122101735_122101886	0.61246	Emx1_Emx2	ENSMUST00000139456.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000106471.2|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000123296.1|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 	ENSMUST00000033157.3|Ndufab1|ENSMUSG00000030869.5|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm10_v2_chr7_+_80246375_80246429	0.611065	Emx1_Emx2	ENSMUST00000058266.6|Ttll13|ENSMUSG00000045467.7|tubulin tyrosine ligase-like family, member 13
mm10_v2_chr3_+_108571699_108571699	0.601623	Emx1_Emx2	ENSMUST00000143054.1|Taf13|ENSMUSG00000048100.7|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr19_+_29925107_29925132	0.595976	Emx1_Emx2	ENSMUST00000120388.2|Il33|ENSMUSG00000024810.10|interleukin 33 	ENSMUST00000144528.1|Il33|ENSMUSG00000024810.10|interleukin 33 	ENSMUST00000177518.1|Il33|ENSMUSG00000024810.10|interleukin 33
mm10_v2_chr2_+_69789647_69789749	0.586897	Emx1_Emx2	ENSMUST00000112266.1|Phospho2|ENSMUSG00000027088.4|phosphatase, orphan 2
mm10_v2_chr4_+_118961578_118961612	0.570938	Emx1_Emx2	ENSMUST00000058651.4|Lao1|ENSMUSG00000024903.10|L-amino acid oxidase 1
mm10_v2_chr10_+_128322443_128322476	0.5708	Emx1_Emx2	ENSMUST00000026446.2|Cnpy2|ENSMUSG00000025381.2|canopy 2 homolog (zebrafish)
mm10_v2_chr12_-_90969768_90969790	0.57059	Emx1_Emx2	ENSMUST00000181184.1|4930544I03Rik|ENSMUSG00000097071.1|RIKEN cDNA 4930544I03 gene
mm10_v2_chr3_+_121531603_121531634	0.565698	Emx1_Emx2	ENSMUST00000180804.1|A530020G20Rik|ENSMUSG00000097124.1|RIKEN cDNA A530020G20 gene
mm10_v2_chr17_+_29274078_29274129	0.563779	Emx1_Emx2	ENSMUST00000149405.2|BC004004|ENSMUSG00000052712.10|cDNA sequence BC004004
mm10_v2_chr3_-_151749877_151749919	0.558529	Emx1_Emx2	ENSMUST00000029671.7|Ifi44|ENSMUSG00000028037.7|interferon-induced protein 44
mm10_v2_chr17_-_45599603_45599623	0.558414	Emx1_Emx2	ENSMUST00000171847.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1 	ENSMUST00000166633.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1 	ENSMUST00000169729.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1
mm10_v2_chr2_-_12419456_12419474	0.556689	Emx1_Emx2	ENSMUST00000154899.1|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A 	ENSMUST00000028105.6|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A
mm10_v2_chr3_-_75451818_75451818	0.556492	Emx1_Emx2	ENSMUST00000178270.1|Wdr49|ENSMUSG00000095162.1|WD repeat domain 49
mm10_v2_chr7_-_14254870_14254890	0.553204	Emx1_Emx2	ENSMUST00000184731.1|Sult2a6|ENSMUSG00000070810.4|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6 	ENSMUST00000076576.6|Sult2a6|ENSMUSG00000070810.4|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6
mm10_v2_chr10_+_81183000_81183048	0.544401	Emx1_Emx2	ENSMUST00000178422.1|Dapk3|ENSMUSG00000034974.6|death-associated protein kinase 3
mm10_v2_chr3_-_117077760_117077769	0.542352	Emx1_Emx2	ENSMUST00000029642.5|1700061I17Rik|ENSMUSG00000028009.5|RIKEN cDNA 1700061I17 gene
mm10_v2_chr14_+_46832127_46832151	0.537011	Emx1_Emx2	ENSMUST00000068532.8|Cgrrf1|ENSMUSG00000055128.8|cell growth regulator with ring finger domain 1
mm10_v2_chr7_+_129591859_129591871	0.536418	Emx1_Emx2	ENSMUST00000084519.5|Wdr11|ENSMUSG00000042055.7|WD repeat domain 11
mm10_v2_chr10_-_39163794_39163794	0.529993	Emx1_Emx2	ENSMUST00000076713.4|Wisp3|ENSMUSG00000062074.6|WNT1 inducible signaling pathway protein 3
mm10_v2_chr6_+_124024758_124024758	0.52764	Emx1_Emx2	ENSMUST00000032238.3|Vmn2r26|ENSMUSG00000096630.1|vomeronasal 2, receptor 26
mm10_v2_chr1_-_4785671_4785744	0.522106	Emx1_Emx2	ENSMUST00000130201.1|Mrpl15|ENSMUSG00000033845.7|mitochondrial ribosomal protein L15 	ENSMUST00000156816.1|Mrpl15|ENSMUSG00000033845.7|mitochondrial ribosomal protein L15
mm10_v2_chr3_-_146495115_146495139	0.520759	Emx1_Emx2	ENSMUST00000093951.2|Spata1|ENSMUSG00000028188.7|spermatogenesis associated 1
mm10_v2_chrM_+_2743_2761	0.517669	Emx1_Emx2	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm10_v2_chr10_-_107486077_107486134	0.51746	Emx1_Emx2	ENSMUST00000000445.1|Myf5|ENSMUSG00000000435.1|myogenic factor 5
mm10_v2_chr8_+_72219726_72219785	0.512119	Emx1_Emx2	ENSMUST00000003123.8|Fam32a|ENSMUSG00000003039.8|family with sequence similarity 32, member A
mm10_v2_chr10_+_116966274_116966295	0.505442	Emx1_Emx2	ENSMUST00000033651.3|D630029K05Rik|ENSMUSG00000031294.3|RIKEN cDNA D630029K05 gene
mm10_v2_chr2_+_175469985_175470063	0.505066	Emx1_Emx2	ENSMUST00000109042.3|Gm8923|ENSMUSG00000078896.5|predicted gene 8923 	ENSMUST00000109002.2|Gm8923|ENSMUSG00000078896.5|predicted gene 8923 	ENSMUST00000109043.2|Gm8923|ENSMUSG00000078896.5|predicted gene 8923 	ENSMUST00000143490.1|Gm8923|ENSMUSG00000078896.5|predicted gene 8923
mm10_v2_chr9_-_124304718_124304718	0.502174	Emx1_Emx2	ENSMUST00000071300.6|2010315B03Rik|ENSMUSG00000074829.4|RIKEN cDNA 2010315B03 gene
mm10_v2_chr1_-_141257158_141257158	0.500256	Emx1_Emx2	ENSMUST00000179202.1|Gm4845|ENSMUSG00000095238.1|predicted gene 4845
mm10_v2_chrX_+_93156154_93156154	0.497451	Emx1_Emx2	ENSMUST00000088134.3|1700003E24Rik|ENSMUSG00000095110.1|RIKEN cDNA 1700003E24 gene
mm10_v2_chr9_+_108648720_108648840	0.49128	Emx1_Emx2	ENSMUST00000098384.2|Gm10621|ENSMUSG00000074075.2|predicted gene 10621
mm10_v2_chr7_+_26757153_26757171	0.488907	Emx1_Emx2	ENSMUST00000077855.6|Cyp2b19|ENSMUSG00000066704.5|cytochrome P450, family 2, subfamily b, polypeptide 19
mm10_v2_chr16_-_26371828_26371846	0.487083	Emx1_Emx2	ENSMUST00000023154.2|Cldn1|ENSMUSG00000022512.2|claudin 1
mm10_v2_chr9_-_77399308_77399418	0.481245	Emx1_Emx2	ENSMUST00000183878.1|RP23-264N13.2|ENSMUSG00000099170.1|RP23-264N13.2
mm10_v2_chr2_-_155930018_155930066	0.478499	Emx1_Emx2	ENSMUST00000152766.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000139232.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000109632.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000006036.6|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000142655.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000159238.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1
mm10_v2_chr15_-_103565069_103565088	0.476322	Emx1_Emx2	ENSMUST00000023134.3|Glycam1|ENSMUSG00000022491.4|glycosylation dependent cell adhesion molecule 1
mm10_v2_chr12_-_84617326_84617466	0.472594	Emx1_Emx2	ENSMUST00000021666.4|Abcd4|ENSMUSG00000021240.5|ATP-binding cassette, sub-family D (ALD), member 4
mm10_v2_chr17_-_40319205_40319208	0.471271	Emx1_Emx2	ENSMUST00000026498.4|Crisp1|ENSMUSG00000025431.4|cysteine-rich secretory protein 1
mm10_v2_chr10_-_42583628_42583639	0.471117	Emx1_Emx2	ENSMUST00000019938.4|Nr2e1|ENSMUSG00000019803.5|nuclear receptor subfamily 2, group E, member 1
mm10_v2_chr4_-_149099802_149099876	0.466539	Emx1_Emx2	ENSMUST00000103217.4|Pex14|ENSMUSG00000028975.10|peroxisomal biogenesis factor 14
mm10_v2_chr2_-_155930190_155930310	0.461927	Emx1_Emx2	ENSMUST00000109636.4|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1 	ENSMUST00000109631.1|Uqcc1|ENSMUSG00000005882.12|ubiquinol-cytochrome c reductase complex assembly factor 1
mm10_v2_chr6_-_101377342_101377388	0.461833	Emx1_Emx2	ENSMUST00000151175.1|Pdzrn3|ENSMUSG00000035357.10|PDZ domain containing RING finger 3
mm10_v2_chr17_+_46772635_46772635	0.451993	Emx1_Emx2	ENSMUST00000071430.5|2310039H08Rik|ENSMUSG00000062619.5|RIKEN cDNA 2310039H08 gene
mm10_v2_chr4_-_86669492_86669560	0.451222	Emx1_Emx2	ENSMUST00000149700.1|Plin2|ENSMUSG00000028494.6|perilipin 2
mm10_v2_chrY_+_80135210_80135210	0.441499	Emx1_Emx2	ENSMUST00000179811.1|Gm21760|ENSMUSG00000095578.1|predicted gene, 21760
mm10_v2_chr11_-_79962374_79962398	0.430202	Emx1_Emx2	ENSMUST00000108241.1|Utp6|ENSMUSG00000035575.5|UTP6, small subunit (SSU) processome component, homolog (yeast) 	ENSMUST00000043152.5|Utp6|ENSMUSG00000035575.5|UTP6, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr12_+_80463095_80463179	0.422041	Emx1_Emx2	ENSMUST00000038185.8|Exd2|ENSMUSG00000032705.8|exonuclease 3'-5' domain containing 2
mm10_v2_chr11_+_58421103_58421118	0.409716	Emx1_Emx2	ENSMUST00000013797.2|1810065E05Rik|ENSMUSG00000013653.2|RIKEN cDNA 1810065E05 gene
mm10_v2_chr8_+_21839926_21839926	0.397715	Emx1_Emx2	ENSMUST00000006745.3|Defb2|ENSMUSG00000006570.3|defensin beta 2
mm10_v2_chr9_+_34904913_34904913	0.397526	Emx1_Emx2	ENSMUST00000045091.6|Kirrel3|ENSMUSG00000032036.9|kin of IRRE like 3 (Drosophila)
mm10_v2_chr4_+_145510759_145510791	0.396551	Emx1_Emx2	ENSMUST00000105742.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225 	ENSMUST00000136309.1|Gm13225|ENSMUSG00000078503.3|predicted gene 13225
mm10_v2_chr6_+_66896480_66896549	0.395972	Emx1_Emx2	ENSMUST00000114222.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12
mm10_v2_chr5_-_139345149_139345233	0.391491	Emx1_Emx2	ENSMUST00000049630.6|Cox19|ENSMUSG00000045438.6|cytochrome c oxidase assembly protein 19
mm10_v2_chr18_+_57142782_57142796	0.386072	Emx1_Emx2	ENSMUST00000139892.1|Megf10|ENSMUSG00000024593.9|multiple EGF-like-domains 10
mm10_v2_chr8_+_85432686_85432686	0.380633	Emx1_Emx2	ENSMUST00000180883.1|1700051O22Rik|ENSMUSG00000096933.1|RIKEN cDNA 1700051O22 Gene
mm10_v2_chr13_+_55784558_55784568	0.38027	Emx1_Emx2	ENSMUST00000021961.5|Catsper3|ENSMUSG00000021499.6|cation channel, sperm associated 3
mm10_v2_chr15_+_99295087_99295279	0.372514	Emx1_Emx2	ENSMUST00000128352.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast) 	ENSMUST00000145482.1|Prpf40b|ENSMUSG00000023007.9|PRP40 pre-mRNA processing factor 40 homolog B (yeast)
mm10_v2_chr2_+_110597298_110597316	0.365873	Emx1_Emx2	ENSMUST00000045972.6|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12 	ENSMUST00000111026.2|Slc5a12|ENSMUSG00000041644.8|solute carrier family 5 (sodium/glucose cotransporter), member 12
mm10_v2_chr1_-_158356258_158356313	0.364734	Emx1_Emx2	ENSMUST00000004133.8|Brinp2|ENSMUSG00000004031.8|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm10_v2_chr3_+_137341103_137341146	0.361986	Emx1_Emx2	ENSMUST00000119475.1|Emcn|ENSMUSG00000054690.11|endomucin
mm10_v2_chr16_+_88728828_88728862	0.341085	Emx1_Emx2	ENSMUST00000060494.6|Krtap13-1|ENSMUSG00000056350.6|keratin associated protein 13-1
mm10_v2_chr8_-_21906412_21906437	0.337841	Emx1_Emx2	ENSMUST00000051965.4|Defb11|ENSMUSG00000045337.4|defensin beta 11
mm10_v2_chr2_+_74721978_74722074	0.334965	Emx1_Emx2	ENSMUST00000047904.3|Hoxd3|ENSMUSG00000079277.3|homeobox D3
mm10_v2_chr6_+_66896397_66896479	0.327267	Emx1_Emx2	ENSMUST00000043148.6|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114228.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114227.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114226.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114225.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114224.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12
mm10_v2_chrY_-_35920097_35920097	0.322158	Emx1_Emx2	ENSMUST00000180332.1|Gm20896|ENSMUSG00000096650.1|predicted gene, 20896
mm10_v2_chr10_+_102158858_102158889	0.321934	Emx1_Emx2	ENSMUST00000138522.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000163753.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000138016.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr11_-_99851608_99851632	0.314999	Emx1_Emx2	ENSMUST00000107437.1|Krtap4-16|ENSMUSG00000046474.9|keratin associated protein 4-16
mm10_v2_chr2_-_119662756_119662835	0.305192	Emx1_Emx2	ENSMUST00000028768.1|Ndufaf1|ENSMUSG00000027305.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 	ENSMUST00000110801.1|Ndufaf1|ENSMUSG00000027305.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 	ENSMUST00000110802.1|Ndufaf1|ENSMUSG00000027305.3|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
mm10_v2_chr1_+_88306731_88306759	0.30456	Emx1_Emx2	ENSMUST00000040210.7|Trpm8|ENSMUSG00000036251.10|transient receptor potential cation channel, subfamily M, member 8
mm10_v2_chr11_+_73371246_73371266	0.304415	Emx1_Emx2	ENSMUST00000120401.1|Olfr376|ENSMUSG00000063881.4|olfactory receptor 376 	ENSMUST00000078952.2|Olfr376|ENSMUSG00000063881.4|olfactory receptor 376 	ENSMUST00000170592.1|Olfr376|ENSMUSG00000063881.4|olfactory receptor 376 	ENSMUST00000127789.1|Olfr376|ENSMUSG00000063881.4|olfactory receptor 376
mm10_v2_chrX_-_160138375_160138435	0.300725	Emx1_Emx2	ENSMUST00000033662.8|Pdha1|ENSMUSG00000031299.10|pyruvate dehydrogenase E1 alpha 1
mm10_v2_chr5_+_121749196_121749196	0.280148	Emx1_Emx2	ENSMUST00000161064.1|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr3_-_37125943_37125969	0.262218	Emx1_Emx2	ENSMUST00000029275.5|Il2|ENSMUSG00000027720.7|interleukin 2
mm10_v2_chr3_+_90541146_90541173	0.262176	Emx1_Emx2	ENSMUST00000107333.1|S100a16|ENSMUSG00000074457.4|S100 calcium binding protein A16 	ENSMUST00000107331.1|S100a16|ENSMUSG00000074457.4|S100 calcium binding protein A16 	ENSMUST00000098910.2|S100a16|ENSMUSG00000074457.4|S100 calcium binding protein A16
mm10_v2_chr3_+_92957386_92957390	0.245901	Emx1_Emx2	ENSMUST00000059053.9|Lce3d|ENSMUSG00000043472.9|late cornified envelope 3D
mm10_v2_chrY_-_35130404_35130404	0.245027	Emx1_Emx2	ENSMUST00000180170.1|Gm20855|ENSMUSG00000095793.1|predicted gene, 20855
mm10_v2_chr13_+_23162643_23162643	0.243365	Emx1_Emx2	ENSMUST00000076180.1|Vmn1r219|ENSMUSG00000061376.1|vomeronasal 1 receptor 219
mm10_v2_chr6_+_17749170_17749265	0.239756	Emx1_Emx2	ENSMUST00000053148.7|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7 	ENSMUST00000115417.3|St7|ENSMUSG00000029534.11|suppression of tumorigenicity 7
mm10_v2_chr2_+_151543877_151543899	0.239044	Emx1_Emx2	ENSMUST00000142271.1|Fkbp1a|ENSMUSG00000032966.8|FK506 binding protein 1a
mm10_v2_chr11_+_94967622_94967661	0.237989	Emx1_Emx2	ENSMUST00000038928.5|Hils1|ENSMUSG00000038994.5|histone H1-like protein in spermatids 1
mm10_v2_chr12_+_11438191_11438238	0.231275	Emx1_Emx2	ENSMUST00000181268.1|4930511A02Rik|ENSMUSG00000097841.1|RIKEN cDNA 4930511A02 gene
mm10_v2_chr10_-_53647080_53647080	0.23026	Emx1_Emx2	ENSMUST00000169866.1|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chr11_-_99285260_99285264	0.229102	Emx1_Emx2	ENSMUST00000017255.3|Krt24|ENSMUSG00000020913.3|keratin 24
mm10_v2_chr8_-_85432841_85432859	0.223313	Emx1_Emx2	ENSMUST00000047749.5|4921524J17Rik|ENSMUSG00000036934.8|RIKEN cDNA 4921524J17 gene
mm10_v2_chr7_+_78783119_78783119	0.220217	Emx1_Emx2	ENSMUST00000032840.4|Mrps11|ENSMUSG00000030611.4|mitochondrial ribosomal protein S11
mm10_v2_chr14_+_4709238_4709296	0.205328	Emx1_Emx2	ENSMUST00000169465.1|Gm7876|ENSMUSG00000091700.1|predicted gene 7876 	ENSMUST00000171305.1|Gm7876|ENSMUSG00000091700.1|predicted gene 7876
mm10_v2_chr7_+_126976338_126976400	0.205156	Emx1_Emx2	ENSMUST00000032920.3|Cdipt|ENSMUSG00000030682.3|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm10_v2_chr5_-_28210022_28210034	0.202271	Emx1_Emx2	ENSMUST00000118882.1|Cnpy1|ENSMUSG00000044681.12|canopy 1 homolog (zebrafish)
mm10_v2_chr10_+_102159000_102159079	0.201005	Emx1_Emx2	ENSMUST00000020039.6|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr18_-_36726730_36726745	0.200879	Emx1_Emx2	ENSMUST00000061829.6|Cd14|ENSMUSG00000051439.6|CD14 antigen
mm10_v2_chr4_-_4077510_4077540	0.200547	Emx1_Emx2	ENSMUST00000108383.1|Sdr16c6|ENSMUSG00000071019.5|short chain dehydrogenase/reductase family 16C, member 6
mm10_v2_chr4_+_52596270_52596276	0.200341	Emx1_Emx2	ENSMUST00000029995.5|4930547C10Rik|ENSMUSG00000028314.6|RIKEN cDNA 4930547C10 gene
mm10_v2_chr3_+_32436376_32436376	0.197908	Emx1_Emx2	ENSMUST00000108242.1|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr2_-_148850899_148850954	0.191385	Emx1_Emx2	ENSMUST00000028937.2|9230104L09Rik|ENSMUSG00000027446.2|RIKEN cDNA 9230104L09 gene
mm10_v2_chr2_-_12419387_12419399	0.187761	Emx1_Emx2	ENSMUST00000124515.1|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A
mm10_v2_chr6_-_13871477_13871518	0.187618	Emx1_Emx2	ENSMUST00000139231.1|2610001J05Rik|ENSMUSG00000052419.6|RIKEN cDNA 2610001J05 gene
mm10_v2_chrY_+_3774805_3774805	0.187395	Emx1_Emx2	ENSMUST00000180202.1|Gm3376|ENSMUSG00000096520.1|predicted gene 3376
mm10_v2_chrY_-_3407067_3407067	0.187395	Emx1_Emx2	ENSMUST00000180310.1|Gm21708|ENSMUSG00000095948.1|predicted gene, 21708
mm10_v2_chr10_+_56745134_56745134	0.186795	Emx1_Emx2	ENSMUST00000067972.4|Gm9956|ENSMUSG00000054758.4|predicted gene 9956
mm10_v2_chr2_-_34826071_34826087	0.184773	Emx1_Emx2	ENSMUST00000113077.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000028220.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr4_+_150236816_150236952	0.183645	Emx1_Emx2	ENSMUST00000080926.6|Eno1|ENSMUSG00000063524.7|enolase 1, alpha non-neuron
mm10_v2_chr13_+_16014457_16014475	0.180885	Emx1_Emx2	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr7_-_19573343_19573377	0.179162	Emx1_Emx2	ENSMUST00000051364.3|Gemin7|ENSMUSG00000044709.5|gem (nuclear organelle) associated protein 7
mm10_v2_chr14_-_118735143_118735160	0.178742	Emx1_Emx2	ENSMUST00000184172.1|RP24-241I19.1|ENSMUSG00000098630.1|RP24-241I19.1
mm10_v2_chr18_-_34579072_34579130	0.177324	Emx1_Emx2	ENSMUST00000079287.5|Nme5|ENSMUSG00000035984.8|NME/NM23 family member 5
mm10_v2_chrX_+_106187100_106187179	0.173902	Emx1_Emx2	ENSMUST00000081593.6|Pgk1|ENSMUSG00000062070.6|phosphoglycerate kinase 1
mm10_v2_chr11_-_42000284_42000356	0.171543	Emx1_Emx2	ENSMUST00000109292.2|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2 	ENSMUST00000109290.1|Gabrg2|ENSMUSG00000020436.11|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm10_v2_chr4_+_145670685_145670685	0.168638	Emx1_Emx2	ENSMUST00000105738.2|Gm13242|ENSMUSG00000058186.7|predicted gene 13242
mm10_v2_chr1_+_163779575_163779592	0.167126	Emx1_Emx2	ENSMUST00000027877.6|Kifap3|ENSMUSG00000026585.7|kinesin-associated protein 3 	ENSMUST00000077642.5|Kifap3|ENSMUSG00000026585.7|kinesin-associated protein 3
mm10_v2_chr12_-_56345862_56345894	0.165986	Emx1_Emx2	ENSMUST00000021416.7|Mbip|ENSMUSG00000021028.7|MAP3K12 binding inhibitory protein 1
mm10_v2_chr9_+_51115999_51116006	0.164907	Emx1_Emx2	ENSMUST00000114431.2|Btg4|ENSMUSG00000032056.9|B cell translocation gene 4
mm10_v2_chr2_+_113285731_113285749	0.164036	Emx1_Emx2	ENSMUST00000040856.2|Tmco5b|ENSMUSG00000041255.2|transmembrane and coiled-coil domains 5B
mm10_v2_chr10_+_112165676_112165676	0.156157	Emx1_Emx2	ENSMUST00000170013.1|Caps2|ENSMUSG00000035694.9|calcyphosphine 2
mm10_v2_chr9_+_14500611_14500620	0.152881	Emx1_Emx2	ENSMUST00000004200.8|Cwc15|ENSMUSG00000004096.8|CWC15 homolog (S. cerevisiae)
mm10_v2_chrX_-_134111852_134111873	0.152243	Emx1_Emx2	ENSMUST00000033610.6|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1
mm10_v2_chr3_+_32436151_32436151	0.151436	Emx1_Emx2	ENSMUST00000029201.7|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr4_+_146156824_146156824	0.147744	Emx1_Emx2	ENSMUST00000168483.2|Zfp600|ENSMUSG00000066007.9|zinc finger protein 600
mm10_v2_chr13_-_92030897_92030908	0.142581	Emx1_Emx2	ENSMUST00000149630.1|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2
mm10_v2_chr5_+_94873797_94873797	0.141826	Emx1_Emx2	ENSMUST00000180076.1|Gm3183|ENSMUSG00000095954.1|predicted gene 3183
mm10_v2_chr7_-_104129792_104129823	0.140124	Emx1_Emx2	ENSMUST00000053743.4|4931431F19Rik|ENSMUSG00000055643.3|RIKEN cDNA 4931431F19 gene
mm10_v2_chrY_+_55733188_55733188	0.139172	Emx1_Emx2	ENSMUST00000177834.1|Gm21858|ENSMUSG00000095135.1|predicted gene, 21858
mm10_v2_chr4_+_147492417_147492417	0.137571	Emx1_Emx2	ENSMUST00000105721.2|Gm13152|ENSMUSG00000078496.3|predicted gene 13152
mm10_v2_chr10_-_103236280_103236327	0.136984	Emx1_Emx2	ENSMUST00000123364.1|Lrriq1|ENSMUSG00000019892.6|leucine-rich repeats and IQ motif containing 1 	ENSMUST00000166240.1|Lrriq1|ENSMUSG00000019892.6|leucine-rich repeats and IQ motif containing 1 	ENSMUST00000020043.5|Lrriq1|ENSMUSG00000019892.6|leucine-rich repeats and IQ motif containing 1
mm10_v2_chrY_-_3303466_3303466	0.136204	Emx1_Emx2	ENSMUST00000179508.1|Gm21677|ENSMUSG00000093918.1|predicted gene, 21677
mm10_v2_chr17_+_19362135_19362135	0.130069	Emx1_Emx2	ENSMUST00000176107.1|Vmn2r99|ENSMUSG00000090304.3|vomeronasal 2, receptor 99
mm10_v2_chr17_-_32822200_32822200	0.127305	Emx1_Emx2	ENSMUST00000179695.1|Zfp799|ENSMUSG00000095253.1|zinc finger protein 799
mm10_v2_chr7_-_84679346_84679401	0.124766	Emx1_Emx2	ENSMUST00000069537.2|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6 	ENSMUST00000178385.1|Zfand6|ENSMUSG00000030629.8|zinc finger, AN1-type domain 6
mm10_v2_chr10_+_101681487_101681662	0.122067	Emx1_Emx2	ENSMUST00000179929.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENSMUST00000127504.1|Mgat4c|ENSMUSG00000019888.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
mm10_v2_chr7_+_28810886_28810918	0.120422	Emx1_Emx2	ENSMUST00000038572.8|Hnrnpl|ENSMUSG00000015165.10|heterogeneous nuclear ribonucleoprotein L
mm10_v2_chr3_+_92992213_92992226	0.120393	Emx1_Emx2	ENSMUST00000090863.3|Lce3f|ENSMUSG00000068885.3|late cornified envelope 3F
mm10_v2_chr4_-_150001231_150001265	0.118977	Emx1_Emx2	ENSMUST00000153394.1|H6pd|ENSMUSG00000028980.8|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
mm10_v2_chr2_-_34826187_34826240	0.117087	Emx1_Emx2	ENSMUST00000113075.1|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000113080.2|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2 	ENSMUST00000091020.3|Fbxw2|ENSMUSG00000035949.9|F-box and WD-40 domain protein 2
mm10_v2_chr4_+_147021850_147021850	0.115746	Emx1_Emx2	ENSMUST00000075775.5|Rex2|ENSMUSG00000067919.8|reduced expression 2
mm10_v2_chr1_+_32172711_32172806	0.113553	Emx1_Emx2	ENSMUST00000027226.5|Khdrbs2|ENSMUSG00000026058.5|KH domain containing, RNA binding, signal transduction associated 2
mm10_v2_chr7_-_79793788_79793788	0.110435	Emx1_Emx2	ENSMUST00000032760.5|Mesp1|ENSMUSG00000030544.5|mesoderm posterior 1
mm10_v2_chr6_-_13871459_13871471	0.108816	Emx1_Emx2	ENSMUST00000155856.1|2610001J05Rik|ENSMUSG00000052419.6|RIKEN cDNA 2610001J05 gene
mm10_v2_chr5_-_86518562_86518577	0.102508	Emx1_Emx2	ENSMUST00000140095.1|Tmprss11g|ENSMUSG00000079451.3|transmembrane protease, serine 11g
mm10_v2_chr2_+_68659842_68659842	0.102286	Emx1_Emx2	ENSMUST00000055930.5|4932414N04Rik|ENSMUSG00000079324.5|RIKEN cDNA 4932414N04 gene
mm10_v2_chr5_+_95106938_95106938	0.101732	Emx1_Emx2	ENSMUST00000163216.1|Gm7942|ENSMUSG00000092166.1|predicted gene 7942
mm10_v2_chr4_-_134245579_134245604	0.101534	Emx1_Emx2	ENSMUST00000030644.7|Zfp593|ENSMUSG00000028840.10|zinc finger protein 593
mm10_v2_chr2_-_73580288_73580353	0.0997809	Emx1_Emx2	ENSMUST00000028515.3|Chrna1|ENSMUSG00000027107.3|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
mm10_v2_chr3_+_137341067_137341095	0.0936393	Emx1_Emx2	ENSMUST00000122064.1|Emcn|ENSMUSG00000054690.11|endomucin
mm10_v2_chr2_+_151494182_151494203	0.0884442	Emx1_Emx2	ENSMUST00000089140.6|Nsfl1c|ENSMUSG00000027455.10|NSFL1 (p97) cofactor (p47)
mm10_v2_chr12_+_112760652_112760659	0.0853716	Emx1_Emx2	ENSMUST00000063888.3|Pld4|ENSMUSG00000052160.6|phospholipase D family, member 4
mm10_v2_chr14_-_44002269_44002269	0.084509	Emx1_Emx2	ENSMUST00000096869.2|Ang6|ENSMUSG00000072598.2|angiogenin, ribonuclease A family, member 6
mm10_v2_chrY_+_52781462_52781462	0.0843488	Emx1_Emx2	ENSMUST00000178673.1|Gm21258|ENSMUSG00000095606.1|predicted gene, 21258
mm10_v2_chrX_-_74393003_74393072	0.082979	Emx1_Emx2	ENSMUST00000015427.6|Fam3a|ENSMUSG00000031399.9|family with sequence similarity 3, member A
mm10_v2_chr1_+_60909148_60909171	0.0731647	Emx1_Emx2	ENSMUST00000097720.3|Ctla4|ENSMUSG00000026011.7|cytotoxic T-lymphocyte-associated protein 4
mm10_v2_chrY_+_29351845_29351845	0.071735	Emx1_Emx2	ENSMUST00000180071.1|Gm21853|ENSMUSG00000096538.1|predicted gene, 21853
mm10_v2_chr6_+_114458519_114458519	0.0710577	Emx1_Emx2	ENSMUST00000160780.1|Hrh1|ENSMUSG00000053004.8|histamine receptor H1
mm10_v2_chr9_-_73968901_73968999	0.0704281	Emx1_Emx2	ENSMUST00000184666.1|Unc13c|ENSMUSG00000062151.7|unc-13 homolog C (C. elegans)
mm10_v2_chr6_+_40442863_40442937	0.0699566	Emx1_Emx2	ENSMUST00000038907.8|Wee2|ENSMUSG00000037159.8|WEE1 homolog 2 (S. pombe) 	ENSMUST00000141490.1|Wee2|ENSMUSG00000037159.8|WEE1 homolog 2 (S. pombe)
mm10_v2_chr4_+_146971976_146971976	0.0691609	Emx1_Emx2	ENSMUST00000146688.2|Gm13150|ENSMUSG00000086147.2|predicted gene 13150
mm10_v2_chr7_-_38019505_38019552	0.0691292	Emx1_Emx2	ENSMUST00000085513.4|Uri1|ENSMUSG00000030421.8|URI1, prefoldin-like chaperone
mm10_v2_chr12_+_87443896_87443946	0.0679926	Emx1_Emx2	ENSMUST00000161023.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000160488.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000077462.7|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein 	ENSMUST00000160880.1|Slirp|ENSMUSG00000021040.9|SRA stem-loop interacting RNA binding protein
mm10_v2_chr16_-_97170707_97170759	0.062978	Emx1_Emx2	ENSMUST00000056102.7|Dscam|ENSMUSG00000050272.9|Down syndrome cell adhesion molecule
mm10_v2_chr4_-_117765550_117765648	0.061249	Emx1_Emx2	ENSMUST00000062747.5|Klf17|ENSMUSG00000048626.5|Kruppel-like factor 17
mm10_v2_chr1_-_63176653_63176822	0.0510854	Emx1_Emx2	ENSMUST00000027111.8|Ndufs1|ENSMUSG00000025968.10|NADH dehydrogenase (ubiquinone) Fe-S protein 1 	ENSMUST00000168099.2|Ndufs1|ENSMUSG00000025968.10|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm10_v2_chr12_-_98259416_98259459	0.0479168	Emx1_Emx2	ENSMUST00000021390.7|Galc|ENSMUSG00000021003.9|galactosylceramidase
mm10_v2_chr4_+_56743406_56743438	0.0455023	Emx1_Emx2	ENSMUST00000095079.4|Actl7a|ENSMUSG00000070979.4|actin-like 7a
mm10_v2_chrX_-_102505359_102505412	0.0419498	Emx1_Emx2	ENSMUST00000087916.4|Hdac8|ENSMUSG00000067567.6|histone deacetylase 8
mm10_v2_chr11_+_99785191_99785200	0.0343964	Emx1_Emx2	ENSMUST00000105059.2|Krtap4-9|ENSMUSG00000078262.4|keratin associated protein 4-9
mm10_v2_chr4_+_150236685_150236767	0.0339627	Emx1_Emx2	ENSMUST00000150175.1|Eno1|ENSMUSG00000063524.7|enolase 1, alpha non-neuron
mm10_v2_chr9_-_14500482_14500503	0.0311846	Emx1_Emx2	ENSMUST00000058796.6|Kdm4d|ENSMUSG00000053914.9|lysine (K)-specific demethylase 4D
mm10_v2_chr4_-_147702553_147702553	0.0297629	Emx1_Emx2	ENSMUST00000117638.1|Zfp534|ENSMUSG00000062518.7|zinc finger protein 534
mm10_v2_chr7_+_131334529_131334622	0.0258867	Emx1_Emx2	ENSMUST00000084505.4|Fam24a|ENSMUSG00000030859.7|family with sequence similarity 24, member A
mm10_v2_chrX_-_134111708_134111788	0.0243935	Emx1_Emx2	ENSMUST00000159259.1|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1 	ENSMUST00000113275.3|Nox1|ENSMUSG00000031257.8|NADPH oxidase 1
mm10_v2_chr2_-_37647199_37647285	0.0240197	Emx1_Emx2	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr18_-_6241486_6241550	0.019396	Emx1_Emx2	ENSMUST00000025083.7|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chrY_-_29683370_29683370	0.0108235	Emx1_Emx2	ENSMUST00000180373.1|Gm21679|ENSMUSG00000094869.1|predicted gene, 21679
mm10_v2_chr9_-_53667429_53667521	0.0107395	Emx1_Emx2	ENSMUST00000166367.1|Cul5|ENSMUSG00000032030.10|cullin 5 	ENSMUST00000034529.7|Cul5|ENSMUSG00000032030.10|cullin 5
mm10_v2_chr9_-_14500394_14500427	0.00505978	Emx1_Emx2	ENSMUST00000115647.2|Kdm4d|ENSMUSG00000053914.9|lysine (K)-specific demethylase 4D
mm10_v2_chrM_+_11734_11757	0.00353509	Emx1_Emx2	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm10_v2_chr8_-_107588392_107588482	0.00187223	Emx1_Emx2	ENSMUST00000044106.4|Psmd7|ENSMUSG00000039067.4|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
