mm10_v2_chr11_+_32286946_32286980	4.20874	Ctcfl_Ctcf	ENSMUST00000101387.3|Hbq1b|ENSMUSG00000073063.3|hemoglobin, theta 1B
mm10_v2_chr19_-_45816007_45816076	2.75749	Ctcfl_Ctcf	ENSMUST00000079431.3|Kcnip2|ENSMUSG00000025221.9|Kv channel-interacting protein 2 	ENSMUST00000026247.6|Kcnip2|ENSMUSG00000025221.9|Kv channel-interacting protein 2 	ENSMUST00000162528.2|Kcnip2|ENSMUSG00000025221.9|Kv channel-interacting protein 2
mm10_v2_chr11_+_32300069_32300069	2.4762	Ctcfl_Ctcf	ENSMUST00000020535.1|Hbq1a|ENSMUSG00000020295.1|hemoglobin, theta 1A
mm10_v2_chr7_-_109170308_109170308	2.19728	Ctcfl_Ctcf	ENSMUST00000036992.7|Lmo1|ENSMUSG00000036111.7|LIM domain only 1
mm10_v2_chr2_+_122637867_122637923	2.14463	Ctcfl_Ctcf	ENSMUST00000110512.3|AA467197|ENSMUSG00000033213.10|expressed sequence AA467197
mm10_v2_chr17_+_26917091_26917107	1.94297	Ctcfl_Ctcf	ENSMUST00000078961.4|Kifc5b|ENSMUSG00000024301.9|kinesin family member C5B
mm10_v2_chr5_-_137741601_137741617	1.89812	Ctcfl_Ctcf	ENSMUST00000119498.1|Nyap1|ENSMUSG00000045348.9|neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1 	ENSMUST00000061789.7|Nyap1|ENSMUSG00000045348.9|neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1
mm10_v2_chr2_+_122637844_122637864	1.89604	Ctcfl_Ctcf	ENSMUST00000047498.8|AA467197|ENSMUSG00000033213.10|expressed sequence AA467197
mm10_v2_chr5_-_5749317_5749340	1.82741	Ctcfl_Ctcf	ENSMUST00000015796.2|Steap1|ENSMUSG00000015652.3|six transmembrane epithelial antigen of the prostate 1
mm10_v2_chr5_+_144768536_144768552	1.80638	Ctcfl_Ctcf	ENSMUST00000128550.1|Trrap|ENSMUSG00000045482.9|transformation/transcription domain-associated protein
mm10_v2_chr14_+_33319703_33319744	1.7996	Ctcfl_Ctcf	ENSMUST00000111955.1|Arhgap22|ENSMUSG00000063506.7|Rho GTPase activating protein 22
mm10_v2_chr5_-_36398090_36398149	1.70093	Ctcfl_Ctcf	ENSMUST00000037370.7|Sorcs2|ENSMUSG00000029093.8|sortilin-related VPS10 domain containing receptor 2 	ENSMUST00000070720.6|Sorcs2|ENSMUSG00000029093.8|sortilin-related VPS10 domain containing receptor 2
mm10_v2_chr5_+_149678224_149678241	1.58836	Ctcfl_Ctcf	ENSMUST00000100404.3|B3galtl|ENSMUSG00000051950.8|beta 1,3-galactosyltransferase-like
mm10_v2_chr16_-_20426375_20426394	1.5813	Ctcfl_Ctcf	ENSMUST00000079158.6|Abcc5|ENSMUSG00000022822.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm10_v2_chr2_+_154613297_154613370	1.57938	Ctcfl_Ctcf	ENSMUST00000081926.6|Zfp341|ENSMUSG00000059842.6|zinc finger protein 341 	ENSMUST00000109702.1|Zfp341|ENSMUSG00000059842.6|zinc finger protein 341
mm10_v2_chr5_-_137741102_137741185	1.57925	Ctcfl_Ctcf	ENSMUST00000149512.1|Nyap1|ENSMUSG00000045348.9|neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1
mm10_v2_chr9_-_44234014_44234046	1.40518	Ctcfl_Ctcf	ENSMUST00000037644.6|Cbl|ENSMUSG00000034342.8|Casitas B-lineage lymphoma
mm10_v2_chr11_-_76577701_76577727	1.38157	Ctcfl_Ctcf	ENSMUST00000176179.1|Abr|ENSMUSG00000017631.12|active BCR-related gene
mm10_v2_chr13_-_53286052_53286129	1.34492	Ctcfl_Ctcf	ENSMUST00000021918.8|Ror2|ENSMUSG00000021464.8|receptor tyrosine kinase-like orphan receptor 2
mm10_v2_chr17_-_25433775_25433790	1.33318	Ctcfl_Ctcf	ENSMUST00000159610.1|Cacna1h|ENSMUSG00000024112.10|calcium channel, voltage-dependent, T type, alpha 1H subunit 	ENSMUST00000159048.1|Cacna1h|ENSMUSG00000024112.10|calcium channel, voltage-dependent, T type, alpha 1H subunit 	ENSMUST00000078496.5|Cacna1h|ENSMUSG00000024112.10|calcium channel, voltage-dependent, T type, alpha 1H subunit
mm10_v2_chr16_-_20426322_20426372	1.32449	Ctcfl_Ctcf	ENSMUST00000115547.2|Abcc5|ENSMUSG00000022822.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 5 	ENSMUST00000096199.4|Abcc5|ENSMUSG00000022822.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm10_v2_chr1_+_91366412_91366433	1.31712	Ctcfl_Ctcf	ENSMUST00000086861.5|Fam132b|ENSMUSG00000047443.8|family with sequence similarity 132, member B
mm10_v2_chr7_+_122159422_122159501	1.31708	Ctcfl_Ctcf	ENSMUST00000033154.6|Plk1|ENSMUSG00000030867.6|polo-like kinase 1
mm10_v2_chr16_-_20425881_20425986	1.31687	Ctcfl_Ctcf	ENSMUST00000077867.3|Abcc5|ENSMUSG00000022822.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm10_v2_chr7_+_45434833_45434871	1.30838	Ctcfl_Ctcf	ENSMUST00000003964.8|Gys1|ENSMUSG00000003865.8|glycogen synthase 1, muscle
mm10_v2_chr2_-_150668198_150668258	1.30704	Ctcfl_Ctcf	ENSMUST00000028944.3|Acss1|ENSMUSG00000027452.5|acyl-CoA synthetase short-chain family member 1
mm10_v2_chr2_+_29619692_29619825	1.30131	Ctcfl_Ctcf	ENSMUST00000095087.4|Rapgef1|ENSMUSG00000039844.13|Rap guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000091146.5|Rapgef1|ENSMUSG00000039844.13|Rap guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000102872.4|Rapgef1|ENSMUSG00000039844.13|Rap guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr3_-_96708524_96708560	1.26851	Ctcfl_Ctcf	ENSMUST00000029742.5|Nudt17|ENSMUSG00000028100.5|nudix (nucleoside diphosphate linked moiety X)-type motif 17 	ENSMUST00000171249.1|Nudt17|ENSMUSG00000028100.5|nudix (nucleoside diphosphate linked moiety X)-type motif 17
mm10_v2_chr2_-_32353247_32353282	1.26038	Ctcfl_Ctcf	ENSMUST00000078352.5|Dnm1|ENSMUSG00000026825.11|dynamin 1 	ENSMUST00000113352.2|Dnm1|ENSMUSG00000026825.11|dynamin 1 	ENSMUST00000113365.1|Dnm1|ENSMUSG00000026825.11|dynamin 1
mm10_v2_chr9_+_65101453_65101535	1.24268	Ctcfl_Ctcf	ENSMUST00000077696.6|Igdcc4|ENSMUSG00000032816.8|immunoglobulin superfamily, DCC subclass, member 4 	ENSMUST00000035499.4|Igdcc4|ENSMUSG00000032816.8|immunoglobulin superfamily, DCC subclass, member 4 	ENSMUST00000166273.1|Igdcc4|ENSMUSG00000032816.8|immunoglobulin superfamily, DCC subclass, member 4
mm10_v2_chr7_+_45434876_45434889	1.23704	Ctcfl_Ctcf	ENSMUST00000107766.1|Gys1|ENSMUSG00000003865.8|glycogen synthase 1, muscle
mm10_v2_chr15_-_102350692_102350771	1.23482	Ctcfl_Ctcf	ENSMUST00000041208.7|Aaas|ENSMUSG00000036678.7|achalasia, adrenocortical insufficiency, alacrimia
mm10_v2_chr4_+_140701466_140701509	1.23421	Ctcfl_Ctcf	ENSMUST00000038893.5|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2 	ENSMUST00000138808.1|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2
mm10_v2_chr10_+_3973086_3973157	1.22354	Ctcfl_Ctcf	ENSMUST00000117291.1|Mthfd1l|ENSMUSG00000040675.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 	ENSMUST00000120585.1|Mthfd1l|ENSMUSG00000040675.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 	ENSMUST00000043735.7|Mthfd1l|ENSMUSG00000040675.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
mm10_v2_chr2_-_32353283_32353311	1.2211	Ctcfl_Ctcf	ENSMUST00000091089.5|Dnm1|ENSMUSG00000026825.11|dynamin 1 	ENSMUST00000113350.1|Dnm1|ENSMUSG00000026825.11|dynamin 1
mm10_v2_chr7_-_67803489_67803532	1.21111	Ctcfl_Ctcf	ENSMUST00000181235.1|4833412C05Rik|ENSMUSG00000097697.1|RIKEN cDNA 4833412C05 gene
mm10_v2_chr17_-_56036546_56036647	1.193	Ctcfl_Ctcf	ENSMUST00000003268.9|Sh3gl1|ENSMUSG00000003200.9|SH3-domain GRB2-like 1
mm10_v2_chr14_+_53806497_53806525	1.19025	Ctcfl_Ctcf	ENSMUST00000103672.4|Trav17|ENSMUSG00000096397.2|T cell receptor alpha variable 17
mm10_v2_chr9_-_108452377_108452412	1.17902	Ctcfl_Ctcf	ENSMUST00000035232.7|Klhdc8b|ENSMUSG00000032609.7|kelch domain containing 8B
mm10_v2_chr19_+_7417586_7417650	1.16761	Ctcfl_Ctcf	ENSMUST00000159348.1|2700081O15Rik|ENSMUSG00000053080.9|RIKEN cDNA 2700081O15 gene
mm10_v2_chr17_-_33890539_33890560	1.15689	Ctcfl_Ctcf	ENSMUST00000173386.1|Kifc1|ENSMUSG00000079553.4|kinesin family member C1
mm10_v2_chr17_-_33890584_33890661	1.1424	Ctcfl_Ctcf	ENSMUST00000114361.2|Kifc1|ENSMUSG00000079553.4|kinesin family member C1 	ENSMUST00000173492.1|Kifc1|ENSMUSG00000079553.4|kinesin family member C1
mm10_v2_chr5_-_123132651_123132692	1.11526	Ctcfl_Ctcf	ENSMUST00000031401.5|Rhof|ENSMUSG00000029449.5|ras homolog gene family, member f
mm10_v2_chr5_+_23850590_23850607	1.10943	Ctcfl_Ctcf	ENSMUST00000181574.1|2700038G22Rik|ENSMUSG00000097180.1|RIKEN cDNA 2700038G22 gene
mm10_v2_chr11_-_53470479_53470479	1.07707	Ctcfl_Ctcf	ENSMUST00000057722.2|Gm9837|ENSMUSG00000049427.2|predicted gene 9837
mm10_v2_chr7_-_13009795_13009856	1.06245	Ctcfl_Ctcf	ENSMUST00000051390.7|Zbtb45|ENSMUSG00000049600.7|zinc finger and BTB domain containing 45 	ENSMUST00000172240.1|Zbtb45|ENSMUSG00000049600.7|zinc finger and BTB domain containing 45
mm10_v2_chr7_-_15967470_15967567	1.06086	Ctcfl_Ctcf	ENSMUST00000144956.1|Ehd2|ENSMUSG00000074364.5|EH-domain containing 2 	ENSMUST00000098799.3|Ehd2|ENSMUSG00000074364.5|EH-domain containing 2
mm10_v2_chr8_-_122678653_122678694	1.0565	Ctcfl_Ctcf	ENSMUST00000134045.1|Cbfa2t3|ENSMUSG00000006362.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
mm10_v2_chr1_-_132367879_132367894	1.04548	Ctcfl_Ctcf	ENSMUST00000142609.1|Tmcc2|ENSMUSG00000042066.9|transmembrane and coiled-coil domains 2
mm10_v2_chr16_+_31878810_31878883	1.02422	Ctcfl_Ctcf	ENSMUST00000023464.5|Mfi2|ENSMUSG00000022780.5|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5
mm10_v2_chr11_+_61956779_61956791	1.00345	Ctcfl_Ctcf	ENSMUST00000049836.7|Specc1|ENSMUSG00000042331.7|sperm antigen with calponin homology and coiled-coil domains 1
mm10_v2_chr15_-_73184840_73184971	0.986546	Ctcfl_Ctcf	ENSMUST00000044113.10|Ago2|ENSMUSG00000036698.10|argonaute RISC catalytic subunit 2
mm10_v2_chr4_-_154025657_154025686	0.959374	Ctcfl_Ctcf	ENSMUST00000146426.1|Smim1|ENSMUSG00000078350.5|small integral membrane protein 1
mm10_v2_chr1_-_191575534_191575549	0.951773	Ctcfl_Ctcf	ENSMUST00000027933.5|Dtl|ENSMUSG00000037474.8|denticleless homolog (Drosophila)
mm10_v2_chr8_-_122551316_122551333	0.946703	Ctcfl_Ctcf	ENSMUST00000067252.7|Piezo1|ENSMUSG00000014444.10|piezo-type mechanosensitive ion channel component 1
mm10_v2_chr4_-_154026037_154026230	0.931071	Ctcfl_Ctcf	ENSMUST00000131325.2|Smim1|ENSMUSG00000078350.5|small integral membrane protein 1 	ENSMUST00000146054.1|Smim1|ENSMUSG00000078350.5|small integral membrane protein 1 	ENSMUST00000126119.1|Smim1|ENSMUSG00000078350.5|small integral membrane protein 1 	ENSMUST00000125533.2|Smim1|ENSMUSG00000078350.5|small integral membrane protein 1
mm10_v2_chr4_-_141078302_141078357	0.930741	Ctcfl_Ctcf	ENSMUST00000030760.8|Necap2|ENSMUSG00000028923.8|NECAP endocytosis associated 2
mm10_v2_chr2_-_91963507_91963694	0.919292	Ctcfl_Ctcf	ENSMUST00000028667.3|Dgkz|ENSMUSG00000040479.5|diacylglycerol kinase zeta
mm10_v2_chr6_+_42264983_42265032	0.905503	Ctcfl_Ctcf	ENSMUST00000031895.6|Casp2|ENSMUSG00000029863.7|caspase 2
mm10_v2_chr10_-_80561528_80561560	0.89804	Ctcfl_Ctcf	ENSMUST00000057910.9|Rexo1|ENSMUSG00000047417.11|REX1, RNA exonuclease 1 homolog (S. cerevisiae)
mm10_v2_chr4_-_149137536_149137629	0.893735	Ctcfl_Ctcf	ENSMUST00000176124.1|Apitd1|ENSMUSG00000073705.4|apoptosis-inducing, TAF9-like domain 1 	ENSMUST00000177408.1|Apitd1|ENSMUSG00000073705.4|apoptosis-inducing, TAF9-like domain 1 	ENSMUST00000105695.1|Apitd1|ENSMUSG00000073705.4|apoptosis-inducing, TAF9-like domain 1 	ENSMUST00000030813.3|Apitd1|ENSMUSG00000073705.4|apoptosis-inducing, TAF9-like domain 1
mm10_v2_chr18_-_80363622_80363667	0.886553	Ctcfl_Ctcf	ENSMUST00000184366.1|Kcng2|ENSMUSG00000059852.7|potassium voltage-gated channel, subfamily G, member 2
mm10_v2_chr4_-_154025867_154025919	0.878282	Ctcfl_Ctcf	ENSMUST00000130175.1|Smim1|ENSMUSG00000078350.5|small integral membrane protein 1 	ENSMUST00000182151.1|Smim1|ENSMUSG00000078350.5|small integral membrane protein 1
mm10_v2_chr7_-_28372233_28372371	0.832847	Ctcfl_Ctcf	ENSMUST00000094644.4|Plekhg2|ENSMUSG00000037552.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
mm10_v2_chr11_+_3514861_3514894	0.822972	Ctcfl_Ctcf	ENSMUST00000094469.4|Selm|ENSMUSG00000075702.9|selenoprotein M
mm10_v2_chr7_-_28372597_28372610	0.822353	Ctcfl_Ctcf	ENSMUST00000144700.1|Plekhg2|ENSMUSG00000037552.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
mm10_v2_chr8_-_107425029_107425056	0.820823	Ctcfl_Ctcf	ENSMUST00000003946.8|Nob1|ENSMUSG00000003848.8|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
mm10_v2_chr7_-_45434590_45434709	0.802661	Ctcfl_Ctcf	ENSMUST00000107771.3|Ruvbl2|ENSMUSG00000003868.6|RuvB-like protein 2 	ENSMUST00000141761.1|Ruvbl2|ENSMUSG00000003868.6|RuvB-like protein 2
mm10_v2_chr4_-_154025926_154025992	0.792271	Ctcfl_Ctcf	ENSMUST00000132541.1|Smim1|ENSMUSG00000078350.5|small integral membrane protein 1 	ENSMUST00000143047.1|Smim1|ENSMUSG00000078350.5|small integral membrane protein 1
mm10_v2_chr9_+_21546842_21546936	0.785632	Ctcfl_Ctcf	ENSMUST00000034703.8|Carm1|ENSMUSG00000032185.8|coactivator-associated arginine methyltransferase 1 	ENSMUST00000115395.3|Carm1|ENSMUSG00000032185.8|coactivator-associated arginine methyltransferase 1 	ENSMUST00000115394.1|Carm1|ENSMUSG00000032185.8|coactivator-associated arginine methyltransferase 1
mm10_v2_chr7_-_28372494_28372519	0.784425	Ctcfl_Ctcf	ENSMUST00000119990.1|Plekhg2|ENSMUSG00000037552.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
mm10_v2_chrX_-_133898399_133898429	0.77764	Ctcfl_Ctcf	ENSMUST00000087557.5|Tspan6|ENSMUSG00000067377.6|tetraspanin 6
mm10_v2_chr9_+_110857958_110857987	0.771753	Ctcfl_Ctcf	ENSMUST00000051097.1|Prss50|ENSMUSG00000048752.3|protease, serine, 50
mm10_v2_chr8_+_70282978_70283044	0.771683	Ctcfl_Ctcf	ENSMUST00000110124.2|Homer3|ENSMUSG00000003573.9|homer homolog 3 (Drosophila)
mm10_v2_chr7_+_108934405_108934430	0.768682	Ctcfl_Ctcf	ENSMUST00000033342.6|Eif3f|ENSMUSG00000031029.6|eukaryotic translation initiation factor 3, subunit F
mm10_v2_chr11_+_101733011_101733041	0.766937	Ctcfl_Ctcf	ENSMUST00000129741.1|Dhx8|ENSMUSG00000034931.9|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm10_v2_chr15_-_76817970_76818174	0.754284	Ctcfl_Ctcf	ENSMUST00000175843.1|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000177026.1|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000176736.1|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000036176.8|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000176219.1|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39 	ENSMUST00000077821.3|Arhgap39|ENSMUSG00000033697.9|Rho GTPase activating protein 39
mm10_v2_chr9_+_110333402_110333636	0.748248	Ctcfl_Ctcf	ENSMUST00000133114.1|Scap|ENSMUSG00000032485.8|SREBF chaperone 	ENSMUST00000125759.1|Scap|ENSMUSG00000032485.8|SREBF chaperone
mm10_v2_chr7_-_45136231_45136340	0.744671	Ctcfl_Ctcf	ENSMUST00000124300.1|Rpl13a|ENSMUSG00000074129.6|ribosomal protein L13A 	ENSMUST00000085377.5|Flt3l|ENSMUSG00000089989.3|FMS-like tyrosine kinase 3 ligand
mm10_v2_chr9_+_66158206_66158271	0.743437	Ctcfl_Ctcf	ENSMUST00000034944.2|Dapk2|ENSMUSG00000032380.2|death-associated protein kinase 2
mm10_v2_chr10_-_18546049_18546084	0.735642	Ctcfl_Ctcf	ENSMUST00000020000.5|Hebp2|ENSMUSG00000019853.5|heme binding protein 2
mm10_v2_chr19_+_46304709_46304811	0.725065	Ctcfl_Ctcf	ENSMUST00000073116.5|Nfkb2|ENSMUSG00000025225.8|nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100
mm10_v2_chr5_-_114823460_114823475	0.724444	Ctcfl_Ctcf	ENSMUST00000140374.1|Gm20499|ENSMUSG00000092252.1|predicted gene 20499 	ENSMUST00000100850.4|2610524H06Rik|ENSMUSG00000092486.1|RIKEN cDNA 2610524H06 gene
mm10_v2_chr18_+_73863672_73863713	0.721361	Ctcfl_Ctcf	ENSMUST00000134847.1|Mro|ENSMUSG00000064036.9|maestro
mm10_v2_chr6_+_87887814_87888016	0.718617	Ctcfl_Ctcf	ENSMUST00000113607.3|Copg1|ENSMUSG00000030058.11|coatomer protein complex, subunit gamma 1 	ENSMUST00000049966.5|Copg1|ENSMUSG00000030058.11|coatomer protein complex, subunit gamma 1
mm10_v2_chrX_-_133898292_133898377	0.713146	Ctcfl_Ctcf	ENSMUST00000176718.1|Tspan6|ENSMUSG00000067377.6|tetraspanin 6 	ENSMUST00000176641.1|Tspan6|ENSMUSG00000067377.6|tetraspanin 6
mm10_v2_chr18_+_68337504_68337603	0.70316	Ctcfl_Ctcf	ENSMUST00000172148.1|Mc5r|ENSMUSG00000007480.3|melanocortin 5 receptor
mm10_v2_chrX_-_134751331_134751424	0.698507	Ctcfl_Ctcf	ENSMUST00000113194.1|Armcx6|ENSMUSG00000050394.8|armadillo repeat containing, X-linked 6 	ENSMUST00000052431.5|Armcx6|ENSMUSG00000050394.8|armadillo repeat containing, X-linked 6
mm10_v2_chr3_-_95217741_95217765	0.695653	Ctcfl_Ctcf	ENSMUST00000107204.1|Gabpb2|ENSMUSG00000038766.10|GA repeat binding protein, beta 2
mm10_v2_chr4_+_152039315_152039356	0.692081	Ctcfl_Ctcf	ENSMUST00000084116.6|Nol9|ENSMUSG00000028948.10|nucleolar protein 9 	ENSMUST00000105663.1|Nol9|ENSMUSG00000028948.10|nucleolar protein 9 	ENSMUST00000103197.3|Nol9|ENSMUSG00000028948.10|nucleolar protein 9
mm10_v2_chr12_-_101028983_101029042	0.689865	Ctcfl_Ctcf	ENSMUST00000068411.3|Ccdc88c|ENSMUSG00000021182.8|coiled-coil domain containing 88C 	ENSMUST00000085096.3|Ccdc88c|ENSMUSG00000021182.8|coiled-coil domain containing 88C
mm10_v2_chr17_-_7827289_7827310	0.689347	Ctcfl_Ctcf	ENSMUST00000167580.1|Fndc1|ENSMUSG00000071984.4|fibronectin type III domain containing 1 	ENSMUST00000169126.1|Fndc1|ENSMUSG00000071984.4|fibronectin type III domain containing 1
mm10_v2_chr10_-_88379051_88379080	0.684279	Ctcfl_Ctcf	ENSMUST00000138159.1|Dram1|ENSMUSG00000020057.2|DNA-damage regulated autophagy modulator 1
mm10_v2_chr4_-_43025756_43025788	0.683313	Ctcfl_Ctcf	ENSMUST00000098109.2|Pigo|ENSMUSG00000028454.10|phosphatidylinositol glycan anchor biosynthesis, class O
mm10_v2_chr11_-_69579320_69579352	0.679407	Ctcfl_Ctcf	ENSMUST00000048139.5|Wrap53|ENSMUSG00000041346.5|WD repeat containing, antisense to Trp53
mm10_v2_chrX_+_106027300_106027323	0.674631	Ctcfl_Ctcf	ENSMUST00000055941.6|Atp7a|ENSMUSG00000033792.6|ATPase, Cu++ transporting, alpha polypeptide
mm10_v2_chr1_+_172482199_172482314	0.668764	Ctcfl_Ctcf	ENSMUST00000135267.1|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9 	ENSMUST00000052629.6|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9 	ENSMUST00000111235.2|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9
mm10_v2_chr4_+_151933691_151933715	0.66713	Ctcfl_Ctcf	ENSMUST00000062904.4|Dnajc11|ENSMUSG00000039768.10|DnaJ (Hsp40) homolog, subfamily C, member 11
mm10_v2_chr2_+_79255500_79255552	0.666261	Ctcfl_Ctcf	ENSMUST00000099972.4|Itga4|ENSMUSG00000027009.12|integrin alpha 4
mm10_v2_chr16_-_10785525_10785543	0.664552	Ctcfl_Ctcf	ENSMUST00000038099.4|Socs1|ENSMUSG00000038037.4|suppressor of cytokine signaling 1
mm10_v2_chr2_-_114175274_114175293	0.662525	Ctcfl_Ctcf	ENSMUST00000102543.4|Aqr|ENSMUSG00000040383.10|aquarius
mm10_v2_chr10_-_80577285_80577327	0.659754	Ctcfl_Ctcf	ENSMUST00000038558.8|Klf16|ENSMUSG00000035397.8|Kruppel-like factor 16
mm10_v2_chr7_-_46710642_46710687	0.658331	Ctcfl_Ctcf	ENSMUST00000143082.1|Saal1|ENSMUSG00000006763.6|serum amyloid A-like 1
mm10_v2_chr11_+_63132569_63132677	0.657883	Ctcfl_Ctcf	ENSMUST00000108701.1|Pmp22|ENSMUSG00000018217.6|peripheral myelin protein 22
mm10_v2_chr11_+_63133068_63133075	0.655803	Ctcfl_Ctcf	ENSMUST00000108700.1|Pmp22|ENSMUSG00000018217.6|peripheral myelin protein 22
mm10_v2_chr11_+_84179792_84179849	0.653062	Ctcfl_Ctcf	ENSMUST00000137500.2|Acaca|ENSMUSG00000020532.12|acetyl-Coenzyme A carboxylase alpha 	ENSMUST00000130012.2|Acaca|ENSMUSG00000020532.12|acetyl-Coenzyme A carboxylase alpha
mm10_v2_chr10_+_128459236_128459248	0.651989	Ctcfl_Ctcf	ENSMUST00000105235.2|Smarcc2|ENSMUSG00000025369.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENSMUST00000099131.3|Smarcc2|ENSMUSG00000025369.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENSMUST00000026433.7|Smarcc2|ENSMUSG00000025369.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
mm10_v2_chr6_+_83165920_83166004	0.647681	Ctcfl_Ctcf	ENSMUST00000077407.5|Dctn1|ENSMUSG00000031865.9|dynactin 1 	ENSMUST00000113913.1|Dctn1|ENSMUSG00000031865.9|dynactin 1 	ENSMUST00000130212.1|Dctn1|ENSMUSG00000031865.9|dynactin 1
mm10_v2_chr11_-_75169519_75169519	0.645452	Ctcfl_Ctcf	ENSMUST00000055619.4|Hic1|ENSMUSG00000043099.4|hypermethylated in cancer 1
mm10_v2_chr19_-_10304867_10304954	0.639593	Ctcfl_Ctcf	ENSMUST00000039327.4|Dagla|ENSMUSG00000035735.4|diacylglycerol lipase, alpha
mm10_v2_chr9_-_60522017_60522058	0.632026	Ctcfl_Ctcf	ENSMUST00000140824.1|Thsd4|ENSMUSG00000032289.9|thrombospondin, type I, domain containing 4
mm10_v2_chr11_-_101175440_101175444	0.629805	Ctcfl_Ctcf	ENSMUST00000062759.3|Ccr10|ENSMUSG00000044052.3|chemokine (C-C motif) receptor 10
mm10_v2_chr11_-_62648458_62648523	0.62979	Ctcfl_Ctcf	ENSMUST00000057194.8|Fam211a|ENSMUSG00000046417.8|family with sequence similarity 211, member A
mm10_v2_chr1_+_82839449_82839518	0.629147	Ctcfl_Ctcf	ENSMUST00000113444.1|Agfg1|ENSMUSG00000026159.7|ArfGAP with FG repeats 1 	ENSMUST00000063380.4|Agfg1|ENSMUSG00000026159.7|ArfGAP with FG repeats 1
mm10_v2_chr11_-_59964936_59964951	0.628865	Ctcfl_Ctcf	ENSMUST00000062405.7|Rasd1|ENSMUSG00000049892.7|RAS, dexamethasone-induced 1
mm10_v2_chrX_+_106027259_106027293	0.628112	Ctcfl_Ctcf	ENSMUST00000113557.1|Atp7a|ENSMUSG00000033792.6|ATPase, Cu++ transporting, alpha polypeptide
mm10_v2_chr5_-_143315360_143315396	0.619966	Ctcfl_Ctcf	ENSMUST00000046418.2|E130309D02Rik|ENSMUSG00000039244.4|RIKEN cDNA E130309D02 gene
mm10_v2_chr4_-_116167591_116167607	0.614511	Ctcfl_Ctcf	ENSMUST00000030465.3|Tspan1|ENSMUSG00000028699.3|tetraspanin 1 	ENSMUST00000143426.1|Tspan1|ENSMUSG00000028699.3|tetraspanin 1
mm10_v2_chr19_-_24280551_24280615	0.613149	Ctcfl_Ctcf	ENSMUST00000081333.4|Fxn|ENSMUSG00000059363.4|frataxin
mm10_v2_chr9_-_102354685_102354699	0.611125	Ctcfl_Ctcf	ENSMUST00000035129.7|Ephb1|ENSMUSG00000032537.8|Eph receptor B1 	ENSMUST00000085169.5|Ephb1|ENSMUSG00000032537.8|Eph receptor B1
mm10_v2_chr14_+_57999305_57999338	0.609766	Ctcfl_Ctcf	ENSMUST00000180534.1|3110083C13Rik|ENSMUSG00000097303.1|RIKEN cDNA 3110083C13 gene
mm10_v2_chr19_-_4283033_4283142	0.596824	Ctcfl_Ctcf	ENSMUST00000167215.1|Ankrd13d|ENSMUSG00000005986.9|ankyrin repeat domain 13 family, member D 	ENSMUST00000056888.6|Ankrd13d|ENSMUSG00000005986.9|ankyrin repeat domain 13 family, member D
mm10_v2_chr10_-_86022325_86022325	0.59334	Ctcfl_Ctcf	ENSMUST00000181665.1|A230060F14Rik|ENSMUSG00000097692.1|RIKEN cDNA A230060F14 gene
mm10_v2_chr3_-_87768966_87768975	0.591625	Ctcfl_Ctcf	ENSMUST00000174776.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1
mm10_v2_chr11_+_43528759_43528796	0.588302	Ctcfl_Ctcf	ENSMUST00000050574.6|Ccnjl|ENSMUSG00000044707.7|cyclin J-like
mm10_v2_chr13_-_113046357_113046422	0.585384	Ctcfl_Ctcf	ENSMUST00000022282.3|Gpx8|ENSMUSG00000021760.3|glutathione peroxidase 8 (putative)
mm10_v2_chr12_-_27342696_27342726	0.584764	Ctcfl_Ctcf	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr4_+_48540067_48540086	0.576784	Ctcfl_Ctcf	ENSMUST00000064807.2|Msantd3|ENSMUSG00000039693.5|Myb/SANT-like DNA-binding domain containing 3
mm10_v2_chr6_-_89362581_89362637	0.573876	Ctcfl_Ctcf	ENSMUST00000163139.1|Plxna1|ENSMUSG00000030084.5|plexin A1
mm10_v2_chr11_+_101732950_101732965	0.571701	Ctcfl_Ctcf	ENSMUST00000039152.7|Dhx8|ENSMUSG00000034931.9|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm10_v2_chr4_-_116464151_116464274	0.571461	Ctcfl_Ctcf	ENSMUST00000106486.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2 	ENSMUST00000106485.1|Mast2|ENSMUSG00000003810.6|microtubule associated serine/threonine kinase 2
mm10_v2_chr2_+_157914618_157914653	0.569499	Ctcfl_Ctcf	ENSMUST00000109523.1|Vstm2l|ENSMUSG00000037843.6|V-set and transmembrane domain containing 2-like
mm10_v2_chr1_+_135132693_135132741	0.56331	Ctcfl_Ctcf	ENSMUST00000049449.4|Ptpn7|ENSMUSG00000031506.5|protein tyrosine phosphatase, non-receptor type 7
mm10_v2_chr4_-_131838231_131838291	0.558372	Ctcfl_Ctcf	ENSMUST00000030741.2|Ptpru|ENSMUSG00000028909.11|protein tyrosine phosphatase, receptor type, U 	ENSMUST00000105987.2|Ptpru|ENSMUSG00000028909.11|protein tyrosine phosphatase, receptor type, U
mm10_v2_chr9_-_96889381_96889474	0.5556	Ctcfl_Ctcf	ENSMUST00000112951.2|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2 	ENSMUST00000126411.1|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2 	ENSMUST00000078478.1|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2 	ENSMUST00000119141.1|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2 	ENSMUST00000120101.1|Acpl2|ENSMUSG00000043587.9|acid phosphatase-like 2
mm10_v2_chr12_+_99964499_99964525	0.549528	Ctcfl_Ctcf	ENSMUST00000177549.1|Kcnk13|ENSMUSG00000045404.9|potassium channel, subfamily K, member 13 	ENSMUST00000160413.1|Kcnk13|ENSMUSG00000045404.9|potassium channel, subfamily K, member 13 	ENSMUST00000162221.1|Kcnk13|ENSMUSG00000045404.9|potassium channel, subfamily K, member 13 	ENSMUST00000049788.8|Kcnk13|ENSMUSG00000045404.9|potassium channel, subfamily K, member 13
mm10_v2_chr19_+_5568002_5568074	0.536814	Ctcfl_Ctcf	ENSMUST00000096318.3|Ap5b1|ENSMUSG00000049562.5|adaptor-related protein complex 5, beta 1 subunit
mm10_v2_chr12_+_24708984_24709029	0.532907	Ctcfl_Ctcf	ENSMUST00000154588.1|Rrm2|ENSMUSG00000020649.5|ribonucleotide reductase M2
mm10_v2_chr10_-_127030813_127030840	0.52939	Ctcfl_Ctcf	ENSMUST00000040560.4|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chr2_-_114175321_114175344	0.528758	Ctcfl_Ctcf	ENSMUST00000043160.6|Aqr|ENSMUSG00000040383.10|aquarius
mm10_v2_chr4_-_43045686_43045825	0.527525	Ctcfl_Ctcf	ENSMUST00000107956.1|Fam214b|ENSMUSG00000036002.6|family with sequence similarity 214, member B 	ENSMUST00000107957.1|Fam214b|ENSMUSG00000036002.6|family with sequence similarity 214, member B
mm10_v2_chr19_+_6400523_6400583	0.526767	Ctcfl_Ctcf	ENSMUST00000146831.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2 	ENSMUST00000035716.8|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2 	ENSMUST00000138555.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2 	ENSMUST00000167240.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2
mm10_v2_chr2_-_164911586_164911757	0.525155	Ctcfl_Ctcf	ENSMUST00000041361.7|Zfp335|ENSMUSG00000039834.11|zinc finger protein 335
mm10_v2_chr19_-_6141402_6141424	0.520743	Ctcfl_Ctcf	ENSMUST00000025893.5|Arl2|ENSMUSG00000024944.5|ADP-ribosylation factor-like 2
mm10_v2_chr2_-_152831665_152831735	0.51733	Ctcfl_Ctcf	ENSMUST00000156688.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000007803.5|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr19_-_6015769_6015830	0.516945	Ctcfl_Ctcf	ENSMUST00000164843.1|Capn1|ENSMUSG00000024942.10|calpain 1
mm10_v2_chr17_-_24479034_24479083	0.515636	Ctcfl_Ctcf	ENSMUST00000179163.1|Mlst8|ENSMUSG00000024142.8|MTOR associated protein, LST8 homolog (S. cerevisiae) 	ENSMUST00000070888.6|Mlst8|ENSMUSG00000024142.8|MTOR associated protein, LST8 homolog (S. cerevisiae)
mm10_v2_chr9_+_110333276_110333327	0.514735	Ctcfl_Ctcf	ENSMUST00000125823.1|Scap|ENSMUSG00000032485.8|SREBF chaperone 	ENSMUST00000131328.1|Scap|ENSMUSG00000032485.8|SREBF chaperone
mm10_v2_chr7_+_25686994_25687012	0.5121	Ctcfl_Ctcf	ENSMUST00000002678.9|Tgfb1|ENSMUSG00000002603.9|transforming growth factor, beta 1
mm10_v2_chr5_+_115559505_115559578	0.511852	Ctcfl_Ctcf	ENSMUST00000156359.1|Rplp0|ENSMUSG00000067274.4|ribosomal protein, large, P0 	ENSMUST00000152976.1|Rplp0|ENSMUSG00000067274.4|ribosomal protein, large, P0
mm10_v2_chr11_-_102447647_102447682	0.510418	Ctcfl_Ctcf	ENSMUST00000049057.4|Fam171a2|ENSMUSG00000034685.4|family with sequence similarity 171, member A2
mm10_v2_chr9_-_106887000_106887094	0.506252	Ctcfl_Ctcf	ENSMUST00000055843.7|Rbm15b|ENSMUSG00000045365.7|RNA binding motif protein 15B
mm10_v2_chr12_+_80518990_80519087	0.505062	Ctcfl_Ctcf	ENSMUST00000021558.6|Galnt16|ENSMUSG00000021130.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16
mm10_v2_chr1_+_34459746_34459814	0.504353	Ctcfl_Ctcf	ENSMUST00000027302.7|Ptpn18|ENSMUSG00000026126.9|protein tyrosine phosphatase, non-receptor type 18
mm10_v2_chr7_+_66839752_66839813	0.501555	Ctcfl_Ctcf	ENSMUST00000107478.1|Adamts17|ENSMUSG00000058145.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
mm10_v2_chr4_-_43046196_43046220	0.500381	Ctcfl_Ctcf	ENSMUST00000036462.5|Fam214b|ENSMUSG00000036002.6|family with sequence similarity 214, member B
mm10_v2_chr15_-_99705490_99705490	0.499881	Ctcfl_Ctcf	ENSMUST00000163472.2|Gm17349|ENSMUSG00000091604.2|predicted gene, 17349
mm10_v2_chr5_+_137641334_137641437	0.498908	Ctcfl_Ctcf	ENSMUST00000177466.1|Sap25|ENSMUSG00000079165.4|sin3 associated polypeptide 	ENSMUST00000166099.2|Sap25|ENSMUSG00000079165.4|sin3 associated polypeptide
mm10_v2_chr11_+_62648811_62648835	0.49821	Ctcfl_Ctcf	ENSMUST00000127589.1|Mmgt2|ENSMUSG00000048497.5|membrane magnesium transporter 2 	ENSMUST00000155759.2|Mmgt2|ENSMUSG00000048497.5|membrane magnesium transporter 2
mm10_v2_chr7_+_31059342_31059382	0.496173	Ctcfl_Ctcf	ENSMUST00000039775.7|Lgi4|ENSMUSG00000036560.8|leucine-rich repeat LGI family, member 4
mm10_v2_chr8_-_105565985_105566071	0.495241	Ctcfl_Ctcf	ENSMUST00000013304.7|Atp6v0d1|ENSMUSG00000013160.7|ATPase, H+ transporting, lysosomal V0 subunit D1
mm10_v2_chr5_+_115559467_115559499	0.494591	Ctcfl_Ctcf	ENSMUST00000086519.5|Rplp0|ENSMUSG00000067274.4|ribosomal protein, large, P0
mm10_v2_chr7_+_16098458_16098585	0.491458	Ctcfl_Ctcf	ENSMUST00000006181.6|Napa|ENSMUSG00000006024.6|N-ethylmaleimide sensitive fusion protein attachment protein alpha
mm10_v2_chr1_+_172481788_172481819	0.487031	Ctcfl_Ctcf	ENSMUST00000127052.1|Igsf9|ENSMUSG00000037995.9|immunoglobulin superfamily, member 9
mm10_v2_chr9_-_42944479_42944510	0.482503	Ctcfl_Ctcf	ENSMUST00000114865.1|Grik4|ENSMUSG00000032017.8|glutamate receptor, ionotropic, kainate 4
mm10_v2_chr10_-_127030789_127030812	0.479165	Ctcfl_Ctcf	ENSMUST00000120547.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial 	ENSMUST00000152054.1|Tsfm|ENSMUSG00000040521.5|Ts translation elongation factor, mitochondrial
mm10_v2_chr10_+_121033960_121034024	0.474119	Ctcfl_Ctcf	ENSMUST00000020439.4|Wif1|ENSMUSG00000020218.5|Wnt inhibitory factor 1 	ENSMUST00000175867.1|Wif1|ENSMUSG00000020218.5|Wnt inhibitory factor 1
mm10_v2_chr1_+_74125535_74125579	0.466756	Ctcfl_Ctcf	ENSMUST00000080167.4|Rufy4|ENSMUSG00000061815.5|RUN and FYVE domain containing 4 	ENSMUST00000127134.1|Rufy4|ENSMUSG00000061815.5|RUN and FYVE domain containing 4
mm10_v2_chr2_+_3118335_3118392	0.46631	Ctcfl_Ctcf	ENSMUST00000115099.2|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr19_-_4306214_4306369	0.466083	Ctcfl_Ctcf	ENSMUST00000171123.1|Adrbk1|ENSMUSG00000024858.7|adrenergic receptor kinase, beta 1 	ENSMUST00000088737.4|Adrbk1|ENSMUSG00000024858.7|adrenergic receptor kinase, beta 1
mm10_v2_chr2_+_25403044_25403115	0.462258	Ctcfl_Ctcf	ENSMUST00000071442.5|Npdc1|ENSMUSG00000015094.10|neural proliferation, differentiation and control 1
mm10_v2_chr16_+_17276662_17276680	0.461657	Ctcfl_Ctcf	ENSMUST00000069420.4|Tmem191c|ENSMUSG00000055692.12|transmembrane protein 191C
mm10_v2_chr6_-_41636389_41636409	0.461505	Ctcfl_Ctcf	ENSMUST00000031902.5|Trpv6|ENSMUSG00000029868.8|transient receptor potential cation channel, subfamily V, member 6
mm10_v2_chr15_-_44788016_44788063	0.458618	Ctcfl_Ctcf	ENSMUST00000090057.4|Sybu|ENSMUSG00000022340.8|syntabulin (syntaxin-interacting) 	ENSMUST00000110269.1|Sybu|ENSMUSG00000022340.8|syntabulin (syntaxin-interacting)
mm10_v2_chr2_+_65620829_65620857	0.457826	Ctcfl_Ctcf	ENSMUST00000028377.7|Scn2a1|ENSMUSG00000075318.6|sodium channel, voltage-gated, type II, alpha 1
mm10_v2_chr2_-_119271202_119271272	0.456471	Ctcfl_Ctcf	ENSMUST00000037360.7|Rhov|ENSMUSG00000034226.7|ras homolog gene family, member V
mm10_v2_chr5_-_139736291_139736336	0.4564	Ctcfl_Ctcf	ENSMUST00000044642.10|Micall2|ENSMUSG00000036718.11|MICAL-like 2
mm10_v2_chr12_+_24708241_24708292	0.449507	Ctcfl_Ctcf	ENSMUST00000020980.5|Rrm2|ENSMUSG00000020649.5|ribonucleotide reductase M2
mm10_v2_chr4_-_43025792_43025832	0.4445	Ctcfl_Ctcf	ENSMUST00000067481.5|Pigo|ENSMUSG00000028454.10|phosphatidylinositol glycan anchor biosynthesis, class O
mm10_v2_chrX_-_53240101_53240111	0.439714	Ctcfl_Ctcf	ENSMUST00000074861.2|Plac1|ENSMUSG00000061082.5|placental specific protein 1
mm10_v2_chr11_+_62648656_62648685	0.438097	Ctcfl_Ctcf	ENSMUST00000062860.4|Mmgt2|ENSMUSG00000048497.5|membrane magnesium transporter 2
mm10_v2_chr9_+_71215779_71215792	0.436677	Ctcfl_Ctcf	ENSMUST00000034723.5|Aldh1a2|ENSMUSG00000013584.5|aldehyde dehydrogenase family 1, subfamily A2
mm10_v2_chr4_-_132345715_132345747	0.436556	Ctcfl_Ctcf	ENSMUST00000084250.4|Rcc1|ENSMUSG00000028896.7|regulator of chromosome condensation 1
mm10_v2_chr14_+_53616315_53616403	0.436543	Ctcfl_Ctcf	ENSMUST00000180972.1|Trav12-2|ENSMUSG00000096656.4|T cell receptor alpha variable 12-2 	ENSMUST00000185023.1|Trav12-2|ENSMUSG00000096656.4|T cell receptor alpha variable 12-2
mm10_v2_chr5_+_136116631_136116740	0.434333	Ctcfl_Ctcf	ENSMUST00000111127.1|Polr2j|ENSMUSG00000039771.7|polymerase (RNA) II (DNA directed) polypeptide J 	ENSMUST00000041366.7|Polr2j|ENSMUSG00000039771.7|polymerase (RNA) II (DNA directed) polypeptide J 	ENSMUST00000111129.1|Polr2j|ENSMUSG00000039771.7|polymerase (RNA) II (DNA directed) polypeptide J
mm10_v2_chr7_+_66839726_66839750	0.431772	Ctcfl_Ctcf	ENSMUST00000098382.3|Adamts17|ENSMUSG00000058145.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17
mm10_v2_chr3_+_95622236_95622278	0.431487	Ctcfl_Ctcf	ENSMUST00000074353.4|Rps10-ps1|ENSMUSG00000060438.4|ribosomal protein S10, pseudogene 1
mm10_v2_chr2_-_152831112_152831326	0.429104	Ctcfl_Ctcf	ENSMUST00000128172.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr19_+_46056539_46056586	0.423505	Ctcfl_Ctcf	ENSMUST00000111899.1|Pprc1|ENSMUSG00000055491.7|peroxisome proliferative activated receptor, gamma, coactivator-related 1 	ENSMUST00000099392.3|Pprc1|ENSMUSG00000055491.7|peroxisome proliferative activated receptor, gamma, coactivator-related 1 	ENSMUST00000062322.4|Pprc1|ENSMUSG00000055491.7|peroxisome proliferative activated receptor, gamma, coactivator-related 1
mm10_v2_chr8_+_94857450_94857494	0.422803	Ctcfl_Ctcf	ENSMUST00000109521.3|Polr2c|ENSMUSG00000031783.9|polymerase (RNA) II (DNA directed) polypeptide C
mm10_v2_chr1_-_136234113_136234280	0.421148	Ctcfl_Ctcf	ENSMUST00000120339.1|5730559C18Rik|ENSMUSG00000041605.10|RIKEN cDNA 5730559C18 gene 	ENSMUST00000048668.8|5730559C18Rik|ENSMUSG00000041605.10|RIKEN cDNA 5730559C18 gene
mm10_v2_chr11_-_45944910_45944960	0.421052	Ctcfl_Ctcf	ENSMUST00000129820.1|Lsm11|ENSMUSG00000044847.7|U7 snRNP-specific Sm-like protein LSM11
mm10_v2_chr6_+_127446819_127446872	0.418607	Ctcfl_Ctcf	ENSMUST00000112191.1|Parp11|ENSMUSG00000037997.6|poly (ADP-ribose) polymerase family, member 11
mm10_v2_chr8_+_88272403_88272451	0.418281	Ctcfl_Ctcf	ENSMUST00000169037.1|Adcy7|ENSMUSG00000031659.6|adenylate cyclase 7
mm10_v2_chr8_-_105484350_105484350	0.418155	Ctcfl_Ctcf	ENSMUST00000044286.5|Zdhhc1|ENSMUSG00000039199.5|zinc finger, DHHC domain containing 1
mm10_v2_chr1_+_153749496_153749523	0.417605	Ctcfl_Ctcf	ENSMUST00000182722.1|Rnasel|ENSMUSG00000066800.5|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
mm10_v2_chr6_+_135198034_135198109	0.415878	Ctcfl_Ctcf	ENSMUST00000130612.1|8430419L09Rik|ENSMUSG00000030207.9|RIKEN cDNA 8430419L09 gene
mm10_v2_chr19_-_4305955_4306044	0.413125	Ctcfl_Ctcf	ENSMUST00000025791.5|Adrbk1|ENSMUSG00000024858.7|adrenergic receptor kinase, beta 1
mm10_v2_chr10_+_86021961_86021991	0.412888	Ctcfl_Ctcf	ENSMUST00000130320.1|Fbxo7|ENSMUSG00000001786.8|F-box protein 7
mm10_v2_chr1_-_38129618_38129679	0.412514	Ctcfl_Ctcf	ENSMUST00000027251.6|Rev1|ENSMUSG00000026082.6|REV1 homolog (S. cerevisiae)
mm10_v2_chr4_+_48539909_48539935	0.411481	Ctcfl_Ctcf	ENSMUST00000061135.1|Msantd3|ENSMUSG00000039693.5|Myb/SANT-like DNA-binding domain containing 3
mm10_v2_chr6_-_87335758_87335775	0.410992	Ctcfl_Ctcf	ENSMUST00000042025.9|Antxr1|ENSMUSG00000033420.10|anthrax toxin receptor 1
mm10_v2_chr11_-_115813621_115813654	0.406242	Ctcfl_Ctcf	ENSMUST00000041684.4|Caskin2|ENSMUSG00000034471.6|CASK-interacting protein 2 	ENSMUST00000156812.1|Caskin2|ENSMUSG00000034471.6|CASK-interacting protein 2
mm10_v2_chr8_+_84946987_84947012	0.405629	Ctcfl_Ctcf	ENSMUST00000067472.7|Rtbdn|ENSMUSG00000048617.10|retbindin 	ENSMUST00000109740.2|Rtbdn|ENSMUSG00000048617.10|retbindin
mm10_v2_chr3_+_30856014_30856143	0.403059	Ctcfl_Ctcf	ENSMUST00000108258.1|Gpr160|ENSMUSG00000037661.8|G protein-coupled receptor 160 	ENSMUST00000147697.1|Gpr160|ENSMUSG00000037661.8|G protein-coupled receptor 160
mm10_v2_chr1_+_90203980_90204012	0.40069	Ctcfl_Ctcf	ENSMUST00000065587.4|Ackr3|ENSMUSG00000044337.5|atypical chemokine receptor 3 	ENSMUST00000159654.1|Ackr3|ENSMUSG00000044337.5|atypical chemokine receptor 3
mm10_v2_chr11_+_68901538_68901635	0.400483	Ctcfl_Ctcf	ENSMUST00000073471.6|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000101014.2|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000128952.1|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26 	ENSMUST00000167436.1|Rpl26|ENSMUSG00000060938.8|ribosomal protein L26
mm10_v2_chr2_-_11502090_11502126	0.400349	Ctcfl_Ctcf	ENSMUST00000179584.1|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000170196.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000171188.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000114845.3|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000114844.1|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000100411.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr7_-_143094642_143094642	0.400279	Ctcfl_Ctcf	ENSMUST00000009390.3|Trpm5|ENSMUSG00000009246.8|transient receptor potential cation channel, subfamily M, member 5
mm10_v2_chr19_+_6400611_6400623	0.400129	Ctcfl_Ctcf	ENSMUST00000113467.1|Rasgrp2|ENSMUSG00000032946.10|RAS, guanyl releasing protein 2
mm10_v2_chr4_-_132345686_132345708	0.398782	Ctcfl_Ctcf	ENSMUST00000030726.6|Rcc1|ENSMUSG00000028896.7|regulator of chromosome condensation 1
mm10_v2_chr11_+_84179852_84179863	0.398686	Ctcfl_Ctcf	ENSMUST00000136463.2|Acaca|ENSMUSG00000020532.12|acetyl-Coenzyme A carboxylase alpha
mm10_v2_chr15_+_99224976_99224976	0.397643	Ctcfl_Ctcf	ENSMUST00000041415.3|Kcnh3|ENSMUSG00000037579.6|potassium voltage-gated channel, subfamily H (eag-related), member 3
mm10_v2_chr15_-_74709535_74709535	0.394391	Ctcfl_Ctcf	ENSMUST00000050234.2|Jrk|ENSMUSG00000046380.2|jerky
mm10_v2_chr4_-_126468580_126468653	0.393336	Ctcfl_Ctcf	ENSMUST00000097888.3|Ago1|ENSMUSG00000041530.10|argonaute RISC catalytic subunit 1
mm10_v2_chr7_+_24884809_24884917	0.391909	Ctcfl_Ctcf	ENSMUST00000156372.1|Rps19|ENSMUSG00000040952.10|ribosomal protein S19 	ENSMUST00000124035.1|Rps19|ENSMUSG00000040952.10|ribosomal protein S19
mm10_v2_chr2_+_26586607_26586689	0.390417	Ctcfl_Ctcf	ENSMUST00000174211.1|Egfl7|ENSMUSG00000026921.12|EGF-like domain 7 	ENSMUST00000145575.2|Egfl7|ENSMUSG00000026921.12|EGF-like domain 7 	ENSMUST00000173920.1|Egfl7|ENSMUSG00000026921.12|EGF-like domain 7
mm10_v2_chr13_+_55105290_55105399	0.389105	Ctcfl_Ctcf	ENSMUST00000161315.1|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346 	ENSMUST00000021937.5|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346 	ENSMUST00000159278.1|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346 	ENSMUST00000159147.1|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346 	ENSMUST00000161077.1|Zfp346|ENSMUSG00000021481.5|zinc finger protein 346
mm10_v2_chr5_+_114707760_114707866	0.388902	Ctcfl_Ctcf	ENSMUST00000094441.4|Tchp|ENSMUSG00000002486.9|trichoplein, keratin filament binding
mm10_v2_chr19_-_10240689_10240751	0.387788	Ctcfl_Ctcf	ENSMUST00000088013.5|Myrf|ENSMUSG00000036098.9|myelin regulatory factor
mm10_v2_chr10_+_86022189_86022253	0.387128	Ctcfl_Ctcf	ENSMUST00000120344.1|Fbxo7|ENSMUSG00000001786.8|F-box protein 7 	ENSMUST00000117597.1|Fbxo7|ENSMUSG00000001786.8|F-box protein 7
mm10_v2_chr2_+_3118407_3118476	0.385625	Ctcfl_Ctcf	ENSMUST00000091505.4|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr18_-_43393346_43393381	0.385461	Ctcfl_Ctcf	ENSMUST00000025379.7|Dpysl3|ENSMUSG00000024501.13|dihydropyrimidinase-like 3
mm10_v2_chr3_+_14641722_14641754	0.38493	Ctcfl_Ctcf	ENSMUST00000029071.8|Car13|ENSMUSG00000027555.8|carbonic anhydrase 13
mm10_v2_chr15_+_100870670_100870702	0.383323	Ctcfl_Ctcf	ENSMUST00000082209.6|Scn8a|ENSMUSG00000023033.8|sodium channel, voltage-gated, type VIII, alpha
mm10_v2_chr8_+_83666827_83666882	0.380399	Ctcfl_Ctcf	ENSMUST00000019608.5|Ptger1|ENSMUSG00000019464.5|prostaglandin E receptor 1 (subtype EP1)
mm10_v2_chr7_+_45924072_45924243	0.379858	Ctcfl_Ctcf	ENSMUST00000120643.1|Ccdc114|ENSMUSG00000040189.9|coiled-coil domain containing 114 	ENSMUST00000117998.1|Ccdc114|ENSMUSG00000040189.9|coiled-coil domain containing 114 	ENSMUST00000133500.1|Ccdc114|ENSMUSG00000040189.9|coiled-coil domain containing 114
mm10_v2_chr12_-_80760541_80760730	0.379809	Ctcfl_Ctcf	ENSMUST00000073251.6|Ccdc177|ENSMUSG00000062961.6|coiled-coil domain containing 177
mm10_v2_chr9_+_108053154_108053165	0.378038	Ctcfl_Ctcf	ENSMUST00000085060.2|Amigo3|ENSMUSG00000032593.5|adhesion molecule with Ig like domain 3
mm10_v2_chr11_-_101095367_101095439	0.377209	Ctcfl_Ctcf	ENSMUST00000019447.8|Psmc3ip|ENSMUSG00000019303.8|proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein
mm10_v2_chr7_+_120917744_120917815	0.37581	Ctcfl_Ctcf	ENSMUST00000033173.7|Polr3e|ENSMUSG00000030880.7|polymerase (RNA) III (DNA directed) polypeptide E 	ENSMUST00000106483.2|Polr3e|ENSMUSG00000030880.7|polymerase (RNA) III (DNA directed) polypeptide E
mm10_v2_chr13_-_49147931_49148037	0.375786	Ctcfl_Ctcf	ENSMUST00000162581.1|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000110097.2|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000049265.8|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000035538.6|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000110096.1|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2 	ENSMUST00000091623.3|Wnk2|ENSMUSG00000037989.9|WNK lysine deficient protein kinase 2
mm10_v2_chr16_+_21204755_21204787	0.375118	Ctcfl_Ctcf	ENSMUST00000006112.6|Ephb3|ENSMUSG00000005958.8|Eph receptor B3
mm10_v2_chr6_-_83070225_83070377	0.37171	Ctcfl_Ctcf	ENSMUST00000174674.1|Tlx2|ENSMUSG00000068327.3|T cell leukemia, homeobox 2 	ENSMUST00000089641.3|Tlx2|ENSMUSG00000068327.3|T cell leukemia, homeobox 2
mm10_v2_chrX_+_20662898_20662909	0.370986	Ctcfl_Ctcf	ENSMUST00000001989.8|Uba1|ENSMUSG00000001924.9|ubiquitin-like modifier activating enzyme 1
mm10_v2_chr8_+_116943387_116943424	0.370821	Ctcfl_Ctcf	ENSMUST00000109099.3|Atmin|ENSMUSG00000047388.10|ATM interactor
mm10_v2_chrY_-_56020480_56020480	0.369801	Ctcfl_Ctcf	ENSMUST00000179829.1|Gm21340|ENSMUSG00000093888.1|predicted gene, 21340
mm10_v2_chr3_+_30855946_30856002	0.369451	Ctcfl_Ctcf	ENSMUST00000108261.1|Gpr160|ENSMUSG00000037661.8|G protein-coupled receptor 160 	ENSMUST00000108259.1|Gpr160|ENSMUSG00000037661.8|G protein-coupled receptor 160 	ENSMUST00000166278.1|Gpr160|ENSMUSG00000037661.8|G protein-coupled receptor 160 	ENSMUST00000046748.6|Gpr160|ENSMUSG00000037661.8|G protein-coupled receptor 160
mm10_v2_chr14_+_53676141_53676141	0.36708	Ctcfl_Ctcf	ENSMUST00000103662.4|Trav9-4|ENSMUSG00000096678.2|T cell receptor alpha variable 9-4
mm10_v2_chr2_-_65567465_65567495	0.363703	Ctcfl_Ctcf	ENSMUST00000066432.5|Scn3a|ENSMUSG00000057182.8|sodium channel, voltage-gated, type III, alpha
mm10_v2_chrX_-_102189371_102189394	0.362953	Ctcfl_Ctcf	ENSMUST00000033683.7|Rps4x|ENSMUSG00000031320.9|ribosomal protein S4, X-linked
mm10_v2_chr6_+_47835650_47835725	0.358242	Ctcfl_Ctcf	ENSMUST00000079881.4|Zfp398|ENSMUSG00000062519.7|zinc finger protein 398 	ENSMUST00000114598.1|Zfp398|ENSMUSG00000062519.7|zinc finger protein 398
mm10_v2_chr10_-_128525859_128525880	0.355599	Ctcfl_Ctcf	ENSMUST00000026427.6|Esyt1|ENSMUSG00000025366.7|extended synaptotagmin-like protein 1
mm10_v2_chr7_+_28267809_28267932	0.355012	Ctcfl_Ctcf	ENSMUST00000059596.6|Eid2|ENSMUSG00000046058.6|EP300 interacting inhibitor of differentiation 2
mm10_v2_chr17_+_34592248_34592329	0.354082	Ctcfl_Ctcf	ENSMUST00000038149.6|Pbx2|ENSMUSG00000034673.8|pre B cell leukemia homeobox 2
mm10_v2_chr2_-_11502067_11502080	0.354078	Ctcfl_Ctcf	ENSMUST00000028114.6|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENSMUST00000049849.6|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr11_+_55204319_55204386	0.352263	Ctcfl_Ctcf	ENSMUST00000108872.2|Slc36a1|ENSMUSG00000020261.9|solute carrier family 36 (proton/amino acid symporter), member 1 	ENSMUST00000147506.1|Slc36a1|ENSMUSG00000020261.9|solute carrier family 36 (proton/amino acid symporter), member 1 	ENSMUST00000020499.7|Slc36a1|ENSMUSG00000020261.9|solute carrier family 36 (proton/amino acid symporter), member 1
mm10_v2_chr17_-_27565678_27565757	0.346689	Ctcfl_Ctcf	ENSMUST00000154473.1|AI413582|ENSMUSG00000062753.7|expressed sequence AI413582
mm10_v2_chr1_+_133610397_133610417	0.341278	Ctcfl_Ctcf	ENSMUST00000180718.1|Gm26706|ENSMUSG00000097014.1|predicted gene, 26706
mm10_v2_chr2_-_154613425_154613444	0.341011	Ctcfl_Ctcf	ENSMUST00000181369.1|4930519P11Rik|ENSMUSG00000097602.1|RIKEN cDNA 4930519P11 gene
mm10_v2_chr4_+_88760774_88760774	0.339277	Ctcfl_Ctcf	ENSMUST00000178480.1|Gm13283|ENSMUSG00000094355.1|predicted gene 13283
mm10_v2_chr15_-_99772395_99772462	0.334659	Ctcfl_Ctcf	ENSMUST00000109035.4|Cers5|ENSMUSG00000023021.9|ceramide synthase 5
mm10_v2_chr14_+_47472628_47472640	0.333873	Ctcfl_Ctcf	ENSMUST00000095941.2|Fbxo34|ENSMUSG00000037536.7|F-box protein 34
mm10_v2_chr1_-_36557517_36557561	0.331425	Ctcfl_Ctcf	ENSMUST00000114990.1|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C 	ENSMUST00000128104.1|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C 	ENSMUST00000027295.4|Sema4c|ENSMUSG00000026121.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
mm10_v2_chr14_-_70167973_70168004	0.330205	Ctcfl_Ctcf	ENSMUST00000125300.1|Pdlim2|ENSMUSG00000022090.4|PDZ and LIM domain 2
mm10_v2_chr16_-_17911303_17911354	0.328994	Ctcfl_Ctcf	ENSMUST00000003621.8|Dgcr14|ENSMUSG00000003527.8|DiGeorge syndrome critical region gene 14
mm10_v2_chr11_+_78826575_78826618	0.328553	Ctcfl_Ctcf	ENSMUST00000147875.2|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9 	ENSMUST00000141321.1|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9
mm10_v2_chr17_+_56613392_56613425	0.328279	Ctcfl_Ctcf	ENSMUST00000080492.5|Rpl36|ENSMUSG00000057863.5|ribosomal protein L36
mm10_v2_chr1_-_85736525_85736629	0.326897	Ctcfl_Ctcf	ENSMUST00000064788.7|A630001G21Rik|ENSMUSG00000052760.9|RIKEN cDNA A630001G21 gene
mm10_v2_chr11_+_68432112_68432170	0.325566	Ctcfl_Ctcf	ENSMUST00000021283.7|Pik3r5|ENSMUSG00000020901.7|phosphoinositide-3-kinase, regulatory subunit 5, p101
mm10_v2_chr2_+_32151074_32151262	0.325232	Ctcfl_Ctcf	ENSMUST00000036691.7|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B 	ENSMUST00000069817.8|Prrc2b|ENSMUSG00000039262.10|proline-rich coiled-coil 2B
mm10_v2_chr11_+_114668524_114668626	0.324983	Ctcfl_Ctcf	ENSMUST00000106602.3|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000077915.3|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000106599.1|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38 	ENSMUST00000082092.4|Rpl38|ENSMUSG00000057322.6|ribosomal protein L38
mm10_v2_chr6_+_135197977_135198023	0.323524	Ctcfl_Ctcf	ENSMUST00000111915.1|8430419L09Rik|ENSMUSG00000030207.9|RIKEN cDNA 8430419L09 gene 	ENSMUST00000111916.1|8430419L09Rik|ENSMUSG00000030207.9|RIKEN cDNA 8430419L09 gene
mm10_v2_chr11_-_82908360_82908411	0.322587	Ctcfl_Ctcf	ENSMUST00000103213.3|Nle1|ENSMUSG00000020692.8|notchless homolog 1 (Drosophila)
mm10_v2_chr11_-_59163281_59163323	0.3224	Ctcfl_Ctcf	ENSMUST00000069631.2|Iba57|ENSMUSG00000049287.5|IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)
mm10_v2_chr3_+_145938004_145938063	0.319751	Ctcfl_Ctcf	ENSMUST00000039571.7|2410004B18Rik|ENSMUSG00000036873.7|RIKEN cDNA 2410004B18 gene
mm10_v2_chr10_+_79793553_79793621	0.318609	Ctcfl_Ctcf	ENSMUST00000046945.6|Palm|ENSMUSG00000035863.7|paralemmin 	ENSMUST00000105379.2|Palm|ENSMUSG00000035863.7|paralemmin
mm10_v2_chr9_-_67043709_67043742	0.316557	Ctcfl_Ctcf	ENSMUST00000113689.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha 	ENSMUST00000113684.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr1_-_92648841_92648841	0.315079	Ctcfl_Ctcf	ENSMUST00000053144.3|Otos|ENSMUSG00000044055.5|otospiralin
mm10_v2_chr14_+_47472547_47472625	0.313787	Ctcfl_Ctcf	ENSMUST00000168833.1|Fbxo34|ENSMUSG00000037536.7|F-box protein 34 	ENSMUST00000163324.1|Fbxo34|ENSMUSG00000037536.7|F-box protein 34 	ENSMUST00000043112.7|Fbxo34|ENSMUSG00000037536.7|F-box protein 34
mm10_v2_chr1_+_153749414_153749442	0.308361	Ctcfl_Ctcf	ENSMUST00000086209.3|Rnasel|ENSMUSG00000066800.5|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
mm10_v2_chr4_+_53631506_53631574	0.307945	Ctcfl_Ctcf	ENSMUST00000159415.2|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like 	ENSMUST00000163067.2|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like
mm10_v2_chr2_+_91650116_91650133	0.3067	Ctcfl_Ctcf	ENSMUST00000111331.2|Arhgap1|ENSMUSG00000027247.10|Rho GTPase activating protein 1
mm10_v2_chr8_-_123515455_123515498	0.305296	Ctcfl_Ctcf	ENSMUST00000176286.1|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1 	ENSMUST00000169210.1|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1 	ENSMUST00000074879.5|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1 	ENSMUST00000066198.7|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1 	ENSMUST00000176155.1|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1
mm10_v2_chr7_-_45136102_45136122	0.303778	Ctcfl_Ctcf	ENSMUST00000125500.1|Flt3l|ENSMUSG00000089989.3|FMS-like tyrosine kinase 3 ligand
mm10_v2_chr14_+_53390570_53390570	0.30048	Ctcfl_Ctcf	ENSMUST00000103636.2|Trav7-2|ENSMUSG00000096417.1|T cell receptor alpha variable 7-2
mm10_v2_chr18_-_77713978_77714010	0.292909	Ctcfl_Ctcf	ENSMUST00000074653.4|8030462N17Rik|ENSMUSG00000047466.9|RIKEN cDNA 8030462N17 gene
mm10_v2_chr4_-_142084221_142084304	0.291014	Ctcfl_Ctcf	ENSMUST00000036572.3|Tmem51|ENSMUSG00000040616.3|transmembrane protein 51
mm10_v2_chr19_-_10869757_10869940	0.288864	Ctcfl_Ctcf	ENSMUST00000120524.1|Tmem132a|ENSMUSG00000024736.8|transmembrane protein 132A 	ENSMUST00000025645.7|Tmem132a|ENSMUSG00000024736.8|transmembrane protein 132A
mm10_v2_chr15_+_100038635_100038669	0.288771	Ctcfl_Ctcf	ENSMUST00000100203.3|Dip2b|ENSMUSG00000023026.9|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm10_v2_chr7_-_16221993_16222050	0.285194	Ctcfl_Ctcf	ENSMUST00000118795.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000119102.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000094816.2|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000163968.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34 	ENSMUST00000121123.1|Dhx34|ENSMUSG00000006019.9|DEAH (Asp-Glu-Ala-His) box polypeptide 34
mm10_v2_chr2_-_11502025_11502049	0.284521	Ctcfl_Ctcf	ENSMUST00000114846.2|Pfkfb3|ENSMUSG00000026773.13|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
mm10_v2_chr10_+_80179482_80179531	0.281103	Ctcfl_Ctcf	ENSMUST00000003154.6|Efna2|ENSMUSG00000003070.6|ephrin A2
mm10_v2_chr2_-_33431324_33431324	0.280553	Ctcfl_Ctcf	ENSMUST00000113158.1|Zbtb34|ENSMUSG00000068966.4|zinc finger and BTB domain containing 34
mm10_v2_chr16_-_14291355_14291408	0.279475	Ctcfl_Ctcf	ENSMUST00000090287.3|Myh11|ENSMUSG00000018830.8|myosin, heavy polypeptide 11, smooth muscle
mm10_v2_chr17_-_24533709_24533732	0.278367	Ctcfl_Ctcf	ENSMUST00000061764.7|Rab26|ENSMUSG00000079657.4|RAB26, member RAS oncogene family
mm10_v2_chrY_-_62464845_62464845	0.273436	Ctcfl_Ctcf	ENSMUST00000179949.1|Gm20823|ENSMUSG00000093950.1|predicted gene, 20823
mm10_v2_chr3_-_104777483_104777547	0.272529	Ctcfl_Ctcf	ENSMUST00000139783.1|Fam19a3|ENSMUSG00000055865.8|family with sequence similarity 19, member A3
mm10_v2_chr6_+_135011609_135011653	0.271354	Ctcfl_Ctcf	ENSMUST00000032326.4|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENSMUST00000130851.1|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENSMUST00000154558.1|Ddx47|ENSMUSG00000030204.4|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
mm10_v2_chrY_-_85530908_85530908	0.269916	Ctcfl_Ctcf	ENSMUST00000181549.1|Gm20854|ENSMUSG00000095650.2|predicted gene, 20854
mm10_v2_chr11_+_51967649_51967709	0.268874	Ctcfl_Ctcf	ENSMUST00000102763.4|Cdkn2aipnl|ENSMUSG00000020392.8|CDKN2A interacting protein N-terminal like
mm10_v2_chr17_+_47769191_47769238	0.266605	Ctcfl_Ctcf	ENSMUST00000160373.1|Tfeb|ENSMUSG00000023990.12|transcription factor EB 	ENSMUST00000159641.1|Tfeb|ENSMUSG00000023990.12|transcription factor EB
mm10_v2_chr17_+_3114957_3114982	0.261746	Ctcfl_Ctcf	ENSMUST00000076734.6|Scaf8|ENSMUSG00000046201.8|SR-related CTD-associated factor 8
mm10_v2_chrX_+_159532674_159532748	0.261052	Ctcfl_Ctcf	ENSMUST00000057180.6|A830080D01Rik|ENSMUSG00000044150.6|RIKEN cDNA A830080D01 gene
mm10_v2_chr10_+_61417972_61417972	0.258972	Ctcfl_Ctcf	ENSMUST00000049339.6|Nodal|ENSMUSG00000037171.6|nodal
mm10_v2_chr17_+_47737030_47737107	0.258597	Ctcfl_Ctcf	ENSMUST00000086932.3|Tfeb|ENSMUSG00000023990.12|transcription factor EB
mm10_v2_chr2_-_158146385_158146436	0.25804	Ctcfl_Ctcf	ENSMUST00000103122.3|Tgm2|ENSMUSG00000037820.9|transglutaminase 2, C polypeptide
mm10_v2_chr13_+_94976435_94976452	0.257068	Ctcfl_Ctcf	ENSMUST00000160409.1|Wdr41|ENSMUSG00000042015.10|WD repeat domain 41 	ENSMUST00000159647.1|Wdr41|ENSMUSG00000042015.10|WD repeat domain 41 	ENSMUST00000167155.1|Wdr41|ENSMUSG00000042015.10|WD repeat domain 41
mm10_v2_chr11_-_3914664_3914664	0.257051	Ctcfl_Ctcf	ENSMUST00000109995.1|Slc35e4|ENSMUSG00000048807.2|solute carrier family 35, member E4 	ENSMUST00000051207.1|Slc35e4|ENSMUSG00000048807.2|solute carrier family 35, member E4
mm10_v2_chrX_-_73786888_73786899	0.2569	Ctcfl_Ctcf	ENSMUST00000052761.8|Idh3g|ENSMUSG00000002010.11|isocitrate dehydrogenase 3 (NAD+), gamma
mm10_v2_chr2_+_91650169_91650237	0.255114	Ctcfl_Ctcf	ENSMUST00000090614.4|Arhgap1|ENSMUSG00000027247.10|Rho GTPase activating protein 1
mm10_v2_chr5_-_110653348_110653422	0.252649	Ctcfl_Ctcf	ENSMUST00000042147.5|Noc4l|ENSMUSG00000033294.5|nucleolar complex associated 4 homolog (S. cerevisiae)
mm10_v2_chr4_+_124714776_124714879	0.251468	Ctcfl_Ctcf	ENSMUST00000030734.4|Sf3a3|ENSMUSG00000028902.4|splicing factor 3a, subunit 3
mm10_v2_chr7_+_24884651_24884714	0.250881	Ctcfl_Ctcf	ENSMUST00000153451.2|Rps19|ENSMUSG00000040952.10|ribosomal protein S19 	ENSMUST00000108429.1|Rps19|ENSMUSG00000040952.10|ribosomal protein S19
mm10_v2_chr11_-_120581553_120581632	0.249767	Ctcfl_Ctcf	ENSMUST00000106197.3|Arhgdia|ENSMUSG00000025132.7|Rho GDP dissociation inhibitor (GDI) alpha
mm10_v2_chr6_-_72380416_72380483	0.248177	Ctcfl_Ctcf	ENSMUST00000101285.3|Vamp5|ENSMUSG00000073002.3|vesicle-associated membrane protein 5 	ENSMUST00000074231.3|Vamp5|ENSMUSG00000073002.3|vesicle-associated membrane protein 5
mm10_v2_chr4_+_125085134_125085261	0.244206	Ctcfl_Ctcf	ENSMUST00000154689.1|Meaf6|ENSMUSG00000028863.7|MYST/Esa1-associated factor 6 	ENSMUST00000055213.4|Meaf6|ENSMUSG00000028863.7|MYST/Esa1-associated factor 6 	ENSMUST00000106171.2|Meaf6|ENSMUSG00000028863.7|MYST/Esa1-associated factor 6
mm10_v2_chr4_+_133480126_133480149	0.243161	Ctcfl_Ctcf	ENSMUST00000051676.6|Fam46b|ENSMUSG00000046694.6|family with sequence similarity 46, member B
mm10_v2_chr4_-_126321669_126321704	0.2412	Ctcfl_Ctcf	ENSMUST00000102617.4|Adprhl2|ENSMUSG00000042558.10|ADP-ribosylhydrolase like 2
mm10_v2_chr7_-_127026479_127026496	0.241135	Ctcfl_Ctcf	ENSMUST00000032916.4|Maz|ENSMUSG00000030678.6|MYC-associated zinc finger protein (purine-binding transcription factor)
mm10_v2_chr4_-_45108038_45108128	0.240867	Ctcfl_Ctcf	ENSMUST00000107809.2|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast) 	ENSMUST00000107808.2|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast) 	ENSMUST00000107807.1|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast) 	ENSMUST00000107810.2|Tomm5|ENSMUSG00000078713.2|translocase of outer mitochondrial membrane 5 homolog (yeast)
mm10_v2_chr2_+_153943919_153943934	0.240339	Ctcfl_Ctcf	ENSMUST00000099181.1|Bpifb4|ENSMUSG00000074665.4|BPI fold containing family B, member 4
mm10_v2_chr3_-_89245829_89245899	0.239738	Ctcfl_Ctcf	ENSMUST00000041022.8|Trim46|ENSMUSG00000042766.11|tripartite motif-containing 46
mm10_v2_chr2_+_164785994_164786071	0.238445	Ctcfl_Ctcf	ENSMUST00000152471.1|Snx21|ENSMUSG00000050373.7|sorting nexin family member 21
mm10_v2_chr2_+_127341630_127341644	0.23714	Ctcfl_Ctcf	ENSMUST00000089673.3|Astl|ENSMUSG00000050468.6|astacin-like metalloendopeptidase (M12 family) 	ENSMUST00000179618.1|Astl|ENSMUSG00000050468.6|astacin-like metalloendopeptidase (M12 family)
mm10_v2_chr15_-_99772596_99772608	0.23661	Ctcfl_Ctcf	ENSMUST00000023762.6|Cers5|ENSMUSG00000023021.9|ceramide synthase 5
mm10_v2_chr10_+_53596936_53597004	0.235814	Ctcfl_Ctcf	ENSMUST00000020004.6|Asf1a|ENSMUSG00000019857.6|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
mm10_v2_chr14_-_24486994_24487064	0.233308	Ctcfl_Ctcf	ENSMUST00000026322.7|Polr3a|ENSMUSG00000025280.7|polymerase (RNA) III (DNA directed) polypeptide A
mm10_v2_chr17_-_27029009_27029009	0.230076	Ctcfl_Ctcf	ENSMUST00000078691.5|Bak1|ENSMUSG00000057789.7|BCL2-antagonist/killer 1
mm10_v2_chr2_-_118373347_118373419	0.229677	Ctcfl_Ctcf	ENSMUST00000039160.2|Gpr176|ENSMUSG00000040133.2|G protein-coupled receptor 176
mm10_v2_chr3_+_89246397_89246493	0.227509	Ctcfl_Ctcf	ENSMUST00000168900.1|Krtcap2|ENSMUSG00000042747.6|keratinocyte associated protein 2
mm10_v2_chr2_+_150749036_150749147	0.225024	Ctcfl_Ctcf	ENSMUST00000094467.5|Entpd6|ENSMUSG00000033068.10|ectonucleoside triphosphate diphosphohydrolase 6
mm10_v2_chr11_-_95514570_95514707	0.224067	Ctcfl_Ctcf	ENSMUST00000058866.7|Nxph3|ENSMUSG00000046719.7|neurexophilin 3
mm10_v2_chr2_+_28513105_28513126	0.223875	Ctcfl_Ctcf	ENSMUST00000135803.1|Ralgds|ENSMUSG00000026821.9|ral guanine nucleotide dissociation stimulator
mm10_v2_chr2_-_121355284_121355396	0.222539	Ctcfl_Ctcf	ENSMUST00000134796.1|Ppip5k1|ENSMUSG00000033526.10|diphosphoinositol pentakisphosphate kinase 1 	ENSMUST00000110628.1|Ppip5k1|ENSMUSG00000033526.10|diphosphoinositol pentakisphosphate kinase 1 	ENSMUST00000110627.1|Ppip5k1|ENSMUSG00000033526.10|diphosphoinositol pentakisphosphate kinase 1 	ENSMUST00000110625.1|Ppip5k1|ENSMUSG00000033526.10|diphosphoinositol pentakisphosphate kinase 1
mm10_v2_chr5_-_137502402_137502518	0.221973	Ctcfl_Ctcf	ENSMUST00000111035.1|Pop7|ENSMUSG00000029715.5|processing of precursor 7, ribonuclease P family, (S. cerevisiae) 	ENSMUST00000031728.4|Pop7|ENSMUSG00000029715.5|processing of precursor 7, ribonuclease P family, (S. cerevisiae)
mm10_v2_chrY_-_57533726_57533726	0.21724	Ctcfl_Ctcf	ENSMUST00000178181.1|Gm21943|ENSMUSG00000096122.1|predicted gene, 21943
mm10_v2_chr13_-_98815408_98815449	0.216256	Ctcfl_Ctcf	ENSMUST00000040340.8|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000099277.4|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000179563.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000109403.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2
mm10_v2_chr4_+_88803254_88803254	0.213289	Ctcfl_Ctcf	ENSMUST00000179490.1|Gm13287|ENSMUSG00000094648.1|predicted gene 13287
mm10_v2_chr4_+_88773834_88773834	0.210414	Ctcfl_Ctcf	ENSMUST00000177806.1|Gm13290|ENSMUSG00000094271.1|predicted gene 13290
mm10_v2_chr8_-_116732991_116733076	0.209697	Ctcfl_Ctcf	ENSMUST00000109102.2|Cdyl2|ENSMUSG00000031758.9|chromodomain protein, Y chromosome-like 2
mm10_v2_chr5_+_76140271_76140317	0.209161	Ctcfl_Ctcf	ENSMUST00000031143.6|Srd5a3|ENSMUSG00000029233.9|steroid 5 alpha-reductase 3
mm10_v2_chr2_-_26409100_26409133	0.208457	Ctcfl_Ctcf	ENSMUST00000114090.1|Inpp5e|ENSMUSG00000026925.10|inositol polyphosphate-5-phosphatase E
mm10_v2_chr14_+_55604550_55604579	0.206963	Ctcfl_Ctcf	ENSMUST00000138037.1|Irf9|ENSMUSG00000002325.8|interferon regulatory factor 9
mm10_v2_chr7_+_24884611_24884644	0.20671	Ctcfl_Ctcf	ENSMUST00000108428.1|Rps19|ENSMUSG00000040952.10|ribosomal protein S19
mm10_v2_chr8_+_105413614_105413631	0.203319	Ctcfl_Ctcf	ENSMUST00000109355.2|Lrrc36|ENSMUSG00000054320.8|leucine rich repeat containing 36
mm10_v2_chr19_-_42779936_42779985	0.202836	Ctcfl_Ctcf	ENSMUST00000069298.6|Hps1|ENSMUSG00000025188.9|Hermansky-Pudlak syndrome 1 homolog (human) 	ENSMUST00000160455.1|Hps1|ENSMUSG00000025188.9|Hermansky-Pudlak syndrome 1 homolog (human) 	ENSMUST00000162004.1|Hps1|ENSMUSG00000025188.9|Hermansky-Pudlak syndrome 1 homolog (human)
mm10_v2_chr15_+_76368884_76368936	0.202375	Ctcfl_Ctcf	ENSMUST00000023213.6|Fam203a|ENSMUSG00000022554.6|family with sequence similarity 203, member A
mm10_v2_chr11_-_58938851_58938923	0.201176	Ctcfl_Ctcf	ENSMUST00000094151.5|Rnf187|ENSMUSG00000020496.8|ring finger protein 187
mm10_v2_chrX_-_8175890_8175956	0.200791	Ctcfl_Ctcf	ENSMUST00000143984.1|Tbc1d25|ENSMUSG00000039201.3|TBC1 domain family, member 25
mm10_v2_chr9_+_64960892_64960937	0.200448	Ctcfl_Ctcf	ENSMUST00000037504.5|Vwa9|ENSMUSG00000034263.6|von Willebrand factor A domain containing 9
mm10_v2_chr11_+_116671658_116671708	0.199846	Ctcfl_Ctcf	ENSMUST00000106378.1|1810032O08Rik|ENSMUSG00000020812.11|RIKEN cDNA 1810032O08 gene 	ENSMUST00000144049.1|1810032O08Rik|ENSMUSG00000020812.11|RIKEN cDNA 1810032O08 gene
mm10_v2_chr8_+_82863351_82863397	0.19922	Ctcfl_Ctcf	ENSMUST00000078525.5|Rnf150|ENSMUSG00000047747.9|ring finger protein 150
mm10_v2_chr9_+_108460518_108460571	0.19906	Ctcfl_Ctcf	ENSMUST00000061209.5|Ccdc71|ENSMUSG00000049305.5|coiled-coil domain containing 71
mm10_v2_chr3_+_122245625_122245722	0.198994	Ctcfl_Ctcf	ENSMUST00000178826.1|Gclm|ENSMUSG00000028124.9|glutamate-cysteine ligase, modifier subunit
mm10_v2_chr1_-_193130201_193130257	0.198154	Ctcfl_Ctcf	ENSMUST00000085555.1|Diexf|ENSMUSG00000016181.4|digestive organ expansion factor homolog (zebrafish)
mm10_v2_chr10_+_74967164_74967203	0.197408	Ctcfl_Ctcf	ENSMUST00000037813.4|Gnaz|ENSMUSG00000040009.5|guanine nucleotide binding protein, alpha z subunit
mm10_v2_chr12_-_80132802_80132844	0.197161	Ctcfl_Ctcf	ENSMUST00000180643.1|2310015A10Rik|ENSMUSG00000097729.1|RIKEN cDNA 2310015A10 gene
mm10_v2_chr7_-_45136056_45136081	0.196732	Ctcfl_Ctcf	ENSMUST00000130628.1|Flt3l|ENSMUSG00000089989.3|FMS-like tyrosine kinase 3 ligand
mm10_v2_chr17_+_47688992_47689030	0.191828	Ctcfl_Ctcf	ENSMUST00000156118.1|Frs3|ENSMUSG00000023266.5|fibroblast growth factor receptor substrate 3
mm10_v2_chr6_+_124663027_124663174	0.191549	Ctcfl_Ctcf	ENSMUST00000004381.7|Lpcat3|ENSMUSG00000004270.7|lysophosphatidylcholine acyltransferase 3
mm10_v2_chr12_+_70825492_70825514	0.189437	Ctcfl_Ctcf	ENSMUST00000057859.7|Frmd6|ENSMUSG00000048285.8|FERM domain containing 6
mm10_v2_chr7_+_16891755_16891800	0.189077	Ctcfl_Ctcf	ENSMUST00000078182.4|Gng8|ENSMUSG00000063594.4|guanine nucleotide binding protein (G protein), gamma 8
mm10_v2_chr14_-_101609033_101609191	0.188106	Ctcfl_Ctcf	ENSMUST00000161991.1|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4 	ENSMUST00000100340.3|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4
mm10_v2_chr5_+_129725063_129725143	0.187495	Ctcfl_Ctcf	ENSMUST00000086046.3|Gbas|ENSMUSG00000029432.6|glioblastoma amplified sequence
mm10_v2_chr9_+_108808356_108808441	0.187219	Ctcfl_Ctcf	ENSMUST00000035218.7|Nckipsd|ENSMUSG00000032598.7|NCK interacting protein with SH3 domain
mm10_v2_chr5_+_76140700_76140730	0.187113	Ctcfl_Ctcf	ENSMUST00000152642.1|Srd5a3|ENSMUSG00000029233.9|steroid 5 alpha-reductase 3 	ENSMUST00000127278.1|Srd5a3|ENSMUSG00000029233.9|steroid 5 alpha-reductase 3
mm10_v2_chr19_+_5050807_5050858	0.186747	Ctcfl_Ctcf	ENSMUST00000025818.6|Rin1|ENSMUSG00000024883.6|Ras and Rab interactor 1
mm10_v2_chrY_+_21164570_21164570	0.185508	Ctcfl_Ctcf	ENSMUST00000181205.1|Gm20909|ENSMUSG00000094294.2|predicted gene, 20909
mm10_v2_chr5_+_36484578_36484620	0.185155	Ctcfl_Ctcf	ENSMUST00000060100.1|Ccdc96|ENSMUSG00000050677.1|coiled-coil domain containing 96
mm10_v2_chr9_-_67043832_67043843	0.184058	Ctcfl_Ctcf	ENSMUST00000113686.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr7_+_80343091_80343146	0.182566	Ctcfl_Ctcf	ENSMUST00000032747.5|Hddc3|ENSMUSG00000030532.5|HD domain containing 3
mm10_v2_chr9_+_57560934_57560989	0.181151	Ctcfl_Ctcf	ENSMUST00000045791.9|Scamp2|ENSMUSG00000040188.9|secretory carrier membrane protein 2
mm10_v2_chrX_-_73458990_73459044	0.18096	Ctcfl_Ctcf	ENSMUST00000033737.8|Haus7|ENSMUSG00000031371.8|HAUS augmin-like complex, subunit 7 	ENSMUST00000077243.4|Haus7|ENSMUSG00000031371.8|HAUS augmin-like complex, subunit 7
mm10_v2_chr5_-_113724749_113724788	0.179892	Ctcfl_Ctcf	ENSMUST00000047891.5|1700069L16Rik|ENSMUSG00000042184.5|RIKEN cDNA 1700069L16 gene 	ENSMUST00000162388.1|1700069L16Rik|ENSMUSG00000042184.5|RIKEN cDNA 1700069L16 gene
mm10_v2_chr15_+_81744848_81744848	0.179139	Ctcfl_Ctcf	ENSMUST00000109554.1|Zc3h7b|ENSMUSG00000022390.10|zinc finger CCCH type containing 7B
mm10_v2_chr5_+_115506668_115506808	0.177867	Ctcfl_Ctcf	ENSMUST00000067268.8|Pxn|ENSMUSG00000029528.11|paxillin 	ENSMUST00000086523.3|Pxn|ENSMUSG00000029528.11|paxillin
mm10_v2_chr8_-_105979413_105979444	0.176308	Ctcfl_Ctcf	ENSMUST00000034371.7|Dpep3|ENSMUSG00000031898.8|dipeptidase 3
mm10_v2_chr17_+_45563928_45563973	0.176075	Ctcfl_Ctcf	ENSMUST00000041353.6|Slc35b2|ENSMUSG00000037089.9|solute carrier family 35, member B2
mm10_v2_chr17_+_24352017_24352028	0.175772	Ctcfl_Ctcf	ENSMUST00000039013.8|Abca3|ENSMUSG00000024130.9|ATP-binding cassette, sub-family A (ABC1), member 3
mm10_v2_chr3_-_97610156_97610222	0.175199	Ctcfl_Ctcf	ENSMUST00000029730.4|Chd1l|ENSMUSG00000028089.4|chromodomain helicase DNA binding protein 1-like
mm10_v2_chr18_+_36952621_36952766	0.174988	Ctcfl_Ctcf	ENSMUST00000115661.2|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chr9_+_64960814_64960843	0.174628	Ctcfl_Ctcf	ENSMUST00000170517.1|Vwa9|ENSMUSG00000034263.6|von Willebrand factor A domain containing 9
mm10_v2_chr8_-_85119637_85119694	0.173667	Ctcfl_Ctcf	ENSMUST00000098550.3|Zfp791|ENSMUSG00000074194.3|zinc finger protein 791
mm10_v2_chr11_+_4135233_4135282	0.173666	Ctcfl_Ctcf	ENSMUST00000124670.1|Rnf215|ENSMUSG00000003581.8|ring finger protein 215
mm10_v2_chr19_+_53329413_53329478	0.17276	Ctcfl_Ctcf	ENSMUST00000025998.7|Mxi1|ENSMUSG00000025025.7|Max interacting protein 1
mm10_v2_chrY_-_8835169_8835169	0.171467	Ctcfl_Ctcf	ENSMUST00000115496.2|Gm20815|ENSMUSG00000096227.1|predicted gene, 20815
mm10_v2_chr3_-_108200415_108200595	0.171229	Ctcfl_Ctcf	ENSMUST00000106654.1|Cyb561d1|ENSMUSG00000048796.7|cytochrome b-561 domain containing 1
mm10_v2_chr6_+_83078339_83078390	0.171176	Ctcfl_Ctcf	ENSMUST00000165164.2|Pcgf1|ENSMUSG00000069678.4|polycomb group ring finger 1 	ENSMUST00000092614.2|Pcgf1|ENSMUSG00000069678.4|polycomb group ring finger 1
mm10_v2_chr5_-_114128171_114128219	0.170963	Ctcfl_Ctcf	ENSMUST00000053657.6|Alkbh2|ENSMUSG00000044339.6|alkB, alkylation repair homolog 2 (E. coli) 	ENSMUST00000112279.1|Alkbh2|ENSMUSG00000044339.6|alkB, alkylation repair homolog 2 (E. coli)
mm10_v2_chr17_+_24352037_24352149	0.170715	Ctcfl_Ctcf	ENSMUST00000079594.5|Abca3|ENSMUSG00000024130.9|ATP-binding cassette, sub-family A (ABC1), member 3
mm10_v2_chr6_-_72789240_72789262	0.169868	Ctcfl_Ctcf	ENSMUST00000069536.5|Tcf7l1|ENSMUSG00000055799.7|transcription factor 7 like 1 (T cell specific, HMG box)
mm10_v2_chr8_+_95332279_95332342	0.169174	Ctcfl_Ctcf	ENSMUST00000034245.8|Usb1|ENSMUSG00000031792.8|U6 snRNA biogenesis 1
mm10_v2_chr5_-_5266038_5266292	0.168749	Ctcfl_Ctcf	ENSMUST00000115451.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000115452.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14 	ENSMUST00000131392.1|Cdk14|ENSMUSG00000028926.9|cyclin-dependent kinase 14
mm10_v2_chr2_-_178407583_178407685	0.168334	Ctcfl_Ctcf	ENSMUST00000081134.3|Sycp2|ENSMUSG00000060445.5|synaptonemal complex protein 2
mm10_v2_chr16_+_20717665_20717784	0.168168	Ctcfl_Ctcf	ENSMUST00000021405.7|Polr2h|ENSMUSG00000021018.7|polymerase (RNA) II (DNA directed) polypeptide H
mm10_v2_chr8_-_70700070_70700088	0.168092	Ctcfl_Ctcf	ENSMUST00000116172.1|Gm11175|ENSMUSG00000080058.1|predicted gene 11175
mm10_v2_chr2_-_155514796_155514860	0.167477	Ctcfl_Ctcf	ENSMUST00000029131.4|Ggt7|ENSMUSG00000027603.9|gamma-glutamyltransferase 7
mm10_v2_chr11_-_100759942_100760011	0.167332	Ctcfl_Ctcf	ENSMUST00000107363.2|Kcnh4|ENSMUSG00000035355.9|potassium voltage-gated channel, subfamily H (eag-related), member 4
mm10_v2_chr2_+_105130883_105130981	0.167076	Ctcfl_Ctcf	ENSMUST00000111098.1|Wt1|ENSMUSG00000016458.7|Wilms tumor 1 homolog 	ENSMUST00000111099.1|Wt1|ENSMUSG00000016458.7|Wilms tumor 1 homolog
mm10_v2_chr10_+_128748455_128748538	0.166703	Ctcfl_Ctcf	ENSMUST00000065210.8|Wibg|ENSMUSG00000064030.8|within bgcn homolog (Drosophila)
mm10_v2_chr4_-_63622421_63622448	0.166382	Ctcfl_Ctcf	ENSMUST00000102862.3|1700018C11Rik|ENSMUSG00000058935.8|RIKEN cDNA 1700018C11 gene
mm10_v2_chr16_+_16896469_16896598	0.166186	Ctcfl_Ctcf	ENSMUST00000027373.9|Ppm1f|ENSMUSG00000026181.11|protein phosphatase 1F (PP2C domain containing)
mm10_v2_chr17_+_28232723_28232789	0.165885	Ctcfl_Ctcf	ENSMUST00000002320.8|Ppard|ENSMUSG00000002250.9|peroxisome proliferator activator receptor delta
mm10_v2_chr19_-_5488271_5488402	0.16449	Ctcfl_Ctcf	ENSMUST00000124334.1|Mus81|ENSMUSG00000024906.3|MUS81 endonuclease homolog (yeast)
mm10_v2_chr10_-_19015347_19015410	0.161938	Ctcfl_Ctcf	ENSMUST00000019997.4|Tnfaip3|ENSMUSG00000019850.5|tumor necrosis factor, alpha-induced protein 3
mm10_v2_chr9_-_67043869_67043945	0.161857	Ctcfl_Ctcf	ENSMUST00000113696.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr2_-_122369130_122369162	0.159728	Ctcfl_Ctcf	ENSMUST00000151130.1|Shf|ENSMUSG00000033256.8|Src homology 2 domain containing F 	ENSMUST00000125826.1|Shf|ENSMUSG00000033256.8|Src homology 2 domain containing F
mm10_v2_chr1_-_133610253_133610294	0.158336	Ctcfl_Ctcf	ENSMUST00000166915.1|Snrpe|ENSMUSG00000090553.2|small nuclear ribonucleoprotein E
mm10_v2_chr14_+_53101693_53101693	0.156978	Ctcfl_Ctcf	ENSMUST00000173112.1|Trav9n-1|ENSMUSG00000092251.1|T cell receptor alpha  variable 9N-1
mm10_v2_chr4_+_126148457_126148532	0.155922	Ctcfl_Ctcf	ENSMUST00000106150.2|Eva1b|ENSMUSG00000050212.4|eva-1 homolog B (C. elegans)
mm10_v2_chr19_-_6969746_6969808	0.154999	Ctcfl_Ctcf	ENSMUST00000025912.8|Plcb3|ENSMUSG00000024960.8|phospholipase C, beta 3
mm10_v2_chr5_+_137518880_137518880	0.154515	Ctcfl_Ctcf	ENSMUST00000031727.7|Gigyf1|ENSMUSG00000029714.7|GRB10 interacting GYF protein 1
mm10_v2_chr7_+_75610038_75610080	0.153757	Ctcfl_Ctcf	ENSMUST00000125771.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr2_+_164785823_164785991	0.151428	Ctcfl_Ctcf	ENSMUST00000174070.1|Snx21|ENSMUSG00000050373.7|sorting nexin family member 21 	ENSMUST00000172577.1|Snx21|ENSMUSG00000050373.7|sorting nexin family member 21 	ENSMUST00000056181.6|Snx21|ENSMUSG00000050373.7|sorting nexin family member 21
mm10_v2_chr4_+_63215402_63215435	0.151346	Ctcfl_Ctcf	ENSMUST00000036300.6|Col27a1|ENSMUSG00000045672.9|collagen, type XXVII, alpha 1
mm10_v2_chr6_-_50596624_50596639	0.150275	Ctcfl_Ctcf	ENSMUST00000031852.4|4921507P07Rik|ENSMUSG00000029828.4|RIKEN cDNA 4921507P07 gene
mm10_v2_chr7_+_4925802_4925868	0.149605	Ctcfl_Ctcf	ENSMUST00000057612.7|Ssc5d|ENSMUSG00000035279.7|scavenger receptor cysteine rich domain containing (5 domains)
mm10_v2_chr4_+_53631460_53631505	0.149165	Ctcfl_Ctcf	ENSMUST00000179534.1|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like 	ENSMUST00000132151.1|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like
mm10_v2_chr3_+_104789011_104789058	0.148873	Ctcfl_Ctcf	ENSMUST00000002303.5|Rhoc|ENSMUSG00000002233.7|ras homolog gene family, member C 	ENSMUST00000106787.1|Rhoc|ENSMUSG00000002233.7|ras homolog gene family, member C 	ENSMUST00000176347.1|Rhoc|ENSMUSG00000002233.7|ras homolog gene family, member C
mm10_v2_chr1_-_133610215_133610249	0.147997	Ctcfl_Ctcf	ENSMUST00000164574.1|Snrpe|ENSMUSG00000090553.2|small nuclear ribonucleoprotein E 	ENSMUST00000166291.1|Snrpe|ENSMUSG00000090553.2|small nuclear ribonucleoprotein E 	ENSMUST00000164096.1|Snrpe|ENSMUSG00000090553.2|small nuclear ribonucleoprotein E
mm10_v2_chr15_-_93519499_93519526	0.146759	Ctcfl_Ctcf	ENSMUST00000109255.2|Prickle1|ENSMUSG00000036158.6|prickle homolog 1 (Drosophila)
mm10_v2_chr4_+_88779850_88779850	0.146289	Ctcfl_Ctcf	ENSMUST00000179425.1|Gm13272|ENSMUSG00000096591.1|predicted gene 13272
mm10_v2_chr3_-_95217690_95217728	0.146205	Ctcfl_Ctcf	ENSMUST00000107209.1|Gabpb2|ENSMUSG00000038766.10|GA repeat binding protein, beta 2
mm10_v2_chr6_+_83078606_83078691	0.144251	Ctcfl_Ctcf	ENSMUST00000177177.1|Pcgf1|ENSMUSG00000069678.4|polycomb group ring finger 1 	ENSMUST00000176089.1|Pcgf1|ENSMUSG00000069678.4|polycomb group ring finger 1
mm10_v2_chr10_+_11281304_11281357	0.142797	Ctcfl_Ctcf	ENSMUST00000129456.1|Fbxo30|ENSMUSG00000047648.7|F-box protein 30
mm10_v2_chr11_+_94629741_94629834	0.14277	Ctcfl_Ctcf	ENSMUST00000021239.6|Lrrc59|ENSMUSG00000020869.8|leucine rich repeat containing 59
mm10_v2_chr19_-_43752924_43753001	0.142735	Ctcfl_Ctcf	ENSMUST00000045562.5|Cox15|ENSMUSG00000040018.9|cytochrome c oxidase assembly protein 15
mm10_v2_chr4_-_6990774_6990823	0.142432	Ctcfl_Ctcf	ENSMUST00000039987.3|Tox|ENSMUSG00000041272.5|thymocyte selection-associated high mobility group box
mm10_v2_chr2_+_164403194_164403219	0.14208	Ctcfl_Ctcf	ENSMUST00000017151.1|Rbpjl|ENSMUSG00000017007.3|recombination signal binding protein for immunoglobulin kappa J region-like
mm10_v2_chr14_-_65098031_65098106	0.140026	Ctcfl_Ctcf	ENSMUST00000022550.7|Extl3|ENSMUSG00000021978.8|exostoses (multiple)-like 3
mm10_v2_chr5_+_107900859_107900879	0.139658	Ctcfl_Ctcf	ENSMUST00000153590.1|Rpl5|ENSMUSG00000058558.6|ribosomal protein L5
mm10_v2_chr5_-_117115972_117116010	0.137841	Ctcfl_Ctcf	ENSMUST00000086471.5|Suds3|ENSMUSG00000066900.5|suppressor of defective silencing 3 homolog (S. cerevisiae) 	ENSMUST00000166397.1|Suds3|ENSMUSG00000066900.5|suppressor of defective silencing 3 homolog (S. cerevisiae)
mm10_v2_chr3_-_89160155_89160202	0.136207	Ctcfl_Ctcf	ENSMUST00000029686.3|Hcn3|ENSMUSG00000028051.4|hyperpolarization-activated, cyclic nucleotide-gated K+ 3
mm10_v2_chr3_-_108200807_108200858	0.130631	Ctcfl_Ctcf	ENSMUST00000106655.1|Cyb561d1|ENSMUSG00000048796.7|cytochrome b-561 domain containing 1 	ENSMUST00000065664.6|Cyb561d1|ENSMUSG00000048796.7|cytochrome b-561 domain containing 1
mm10_v2_chr9_-_67043953_67043962	0.130435	Ctcfl_Ctcf	ENSMUST00000113690.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr8_-_95331756_95331950	0.128009	Ctcfl_Ctcf	ENSMUST00000057717.6|Zfp319|ENSMUSG00000046556.6|zinc finger protein 319
mm10_v2_chr17_+_23853519_23853543	0.127838	Ctcfl_Ctcf	ENSMUST00000061725.7|Prss32|ENSMUSG00000048992.8|protease, serine, 32
mm10_v2_chr14_+_111675113_111675119	0.127253	Ctcfl_Ctcf	ENSMUST00000042767.7|Slitrk5|ENSMUSG00000033214.9|SLIT and NTRK-like family, member 5
mm10_v2_chr19_+_4962306_4962332	0.12638	Ctcfl_Ctcf	ENSMUST00000025836.4|Mrpl11|ENSMUSG00000024902.4|mitochondrial ribosomal protein L11
mm10_v2_chr13_-_54749849_54749893	0.123247	Ctcfl_Ctcf	ENSMUST00000135343.1|Gprin1|ENSMUSG00000069227.4|G protein-regulated inducer of neurite outgrowth 1
mm10_v2_chr2_+_174110340_174110394	0.121986	Ctcfl_Ctcf	ENSMUST00000044415.9|Npepl1|ENSMUSG00000039263.10|aminopeptidase-like 1
mm10_v2_chr7_-_80340152_80340210	0.121238	Ctcfl_Ctcf	ENSMUST00000133728.1|Unc45a|ENSMUSG00000030533.9|unc-45 homolog A (C. elegans)
mm10_v2_chr2_+_93187542_93187553	0.120893	Ctcfl_Ctcf	ENSMUST00000111266.1|Trp53i11|ENSMUSG00000068735.8|transformation related protein 53 inducible protein 11 	ENSMUST00000150462.1|Trp53i11|ENSMUSG00000068735.8|transformation related protein 53 inducible protein 11
mm10_v2_chr3_-_87768932_87768960	0.119373	Ctcfl_Ctcf	ENSMUST00000173184.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000172621.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000174759.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000172590.1|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1 	ENSMUST00000079083.5|Pear1|ENSMUSG00000028073.9|platelet endothelial aggregation receptor 1
mm10_v2_chr9_-_67043743_67043820	0.118514	Ctcfl_Ctcf	ENSMUST00000113695.1|Tpm1|ENSMUSG00000032366.9|tropomyosin 1, alpha
mm10_v2_chr9_+_123478693_123478733	0.118338	Ctcfl_Ctcf	ENSMUST00000026269.2|Limd1|ENSMUSG00000025239.2|LIM domains containing 1
mm10_v2_chr7_-_84086494_84086509	0.117851	Ctcfl_Ctcf	ENSMUST00000064174.5|9930013L23Rik|ENSMUSG00000052353.7|RIKEN cDNA 9930013L23 gene
mm10_v2_chr5_+_110653444_110653482	0.11747	Ctcfl_Ctcf	ENSMUST00000031478.5|Ddx51|ENSMUSG00000029504.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
mm10_v2_chrX_+_155262443_155262481	0.116479	Ctcfl_Ctcf	ENSMUST00000026324.9|Acot9|ENSMUSG00000025287.9|acyl-CoA thioesterase 9
mm10_v2_chr8_-_70873477_70873501	0.116079	Ctcfl_Ctcf	ENSMUST00000007865.5|Ccdc124|ENSMUSG00000007721.5|coiled-coil domain containing 124
mm10_v2_chr2_-_26409161_26409209	0.115541	Ctcfl_Ctcf	ENSMUST00000145701.1|Inpp5e|ENSMUSG00000026925.10|inositol polyphosphate-5-phosphatase E
mm10_v2_chr13_+_35741313_35741385	0.114908	Ctcfl_Ctcf	ENSMUST00000163595.2|Cdyl|ENSMUSG00000059288.7|chromodomain protein, Y chromosome-like
mm10_v2_chr10_+_81292961_81293005	0.114743	Ctcfl_Ctcf	ENSMUST00000163075.1|Pip5k1c|ENSMUSG00000034902.11|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma 	ENSMUST00000105327.3|Pip5k1c|ENSMUSG00000034902.11|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma 	ENSMUST00000045469.8|Pip5k1c|ENSMUSG00000034902.11|phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
mm10_v2_chr3_+_137918526_137918547	0.114157	Ctcfl_Ctcf	ENSMUST00000168345.1|Lamtor3|ENSMUSG00000091512.1|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
mm10_v2_chr15_+_44787746_44787782	0.11397	Ctcfl_Ctcf	ENSMUST00000181839.1|2310069G16Rik|ENSMUSG00000097102.1|RIKEN cDNA 2310069G16 gene
mm10_v2_chr10_+_80292453_80292645	0.111951	Ctcfl_Ctcf	ENSMUST00000068408.7|Rps15|ENSMUSG00000063457.8|ribosomal protein S15 	ENSMUST00000062674.6|Rps15|ENSMUSG00000063457.8|ribosomal protein S15
mm10_v2_chr17_-_51832666_51832678	0.111939	Ctcfl_Ctcf	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr16_+_17797282_17797325	0.111145	Ctcfl_Ctcf	ENSMUST00000012161.3|Scarf2|ENSMUSG00000012017.3|scavenger receptor class F, member 2
mm10_v2_chr8_+_107031218_107031229	0.110994	Ctcfl_Ctcf	ENSMUST00000034388.9|Vps4a|ENSMUSG00000031913.9|vacuolar protein sorting 4a (yeast)
mm10_v2_chr4_+_88776922_88776922	0.110559	Ctcfl_Ctcf	ENSMUST00000179158.1|Gm13289|ENSMUSG00000096582.1|predicted gene 13289
mm10_v2_chr2_+_167538192_167538210	0.109606	Ctcfl_Ctcf	ENSMUST00000052631.7|Snai1|ENSMUSG00000042821.7|snail homolog 1 (Drosophila)
mm10_v2_chr11_-_107189325_107189381	0.108693	Ctcfl_Ctcf	ENSMUST00000018577.7|Nol11|ENSMUSG00000018433.8|nucleolar protein 11 	ENSMUST00000106757.1|Nol11|ENSMUSG00000018433.8|nucleolar protein 11
mm10_v2_chr11_+_88973928_88973961	0.108122	Ctcfl_Ctcf	ENSMUST00000036649.4|Coil|ENSMUSG00000033983.7|coilin 	ENSMUST00000107898.3|Coil|ENSMUSG00000033983.7|coilin
mm10_v2_chr11_-_70982987_70983026	0.105863	Ctcfl_Ctcf	ENSMUST00000078528.6|C1qbp|ENSMUSG00000018446.8|complement component 1, q subcomponent binding protein
mm10_v2_chr11_+_50131342_50131426	0.105137	Ctcfl_Ctcf	ENSMUST00000093138.6|Tbc1d9b|ENSMUSG00000036644.9|TBC1 domain family, member 9B 	ENSMUST00000101270.4|Tbc1d9b|ENSMUSG00000036644.9|TBC1 domain family, member 9B
mm10_v2_chr1_+_161969284_161969313	0.104896	Ctcfl_Ctcf	ENSMUST00000160881.1|Pigc|ENSMUSG00000026698.7|phosphatidylinositol glycan anchor biosynthesis, class C 	ENSMUST00000159648.1|Pigc|ENSMUSG00000026698.7|phosphatidylinositol glycan anchor biosynthesis, class C
mm10_v2_chr2_+_3118523_3118685	0.104733	Ctcfl_Ctcf	ENSMUST00000062934.6|Fam171a1|ENSMUSG00000050530.8|family with sequence similarity 171, member A1
mm10_v2_chr3_-_65529355_65529384	0.10222	Ctcfl_Ctcf	ENSMUST00000099076.3|4931440P22Rik|ENSMUSG00000074580.5|RIKEN cDNA 4931440P22 gene
mm10_v2_chr11_-_8664499_8664551	0.101984	Ctcfl_Ctcf	ENSMUST00000020695.6|Tns3|ENSMUSG00000020422.7|tensin 3
mm10_v2_chr9_+_34486125_34486126	0.101918	Ctcfl_Ctcf	ENSMUST00000183580.1|RP24-225I21.1|ENSMUSG00000098841.1|RP24-225I21.1	ENSMUST00000115148.2|Kirrel3|ENSMUSG00000032036.9|kin of IRRE like 3 (Drosophila)
mm10_v2_chr11_-_113751309_113751327	0.101849	Ctcfl_Ctcf	ENSMUST00000106616.1|Cdc42ep4|ENSMUSG00000041598.7|CDC42 effector protein (Rho GTPase binding) 4
mm10_v2_chr19_-_40612160_40612255	0.100354	Ctcfl_Ctcf	ENSMUST00000132452.1|Tctn3|ENSMUSG00000025008.9|tectonic family member 3 	ENSMUST00000135795.1|Tctn3|ENSMUSG00000025008.9|tectonic family member 3 	ENSMUST00000025981.8|Tctn3|ENSMUSG00000025008.9|tectonic family member 3
mm10_v2_chr11_+_69655314_69655314	0.0947589	Ctcfl_Ctcf	ENSMUST00000047373.5|Sox15|ENSMUSG00000041287.5|SRY-box containing gene 15
mm10_v2_chr16_+_17276291_17276330	0.0938047	Ctcfl_Ctcf	ENSMUST00000164950.1|Tmem191c|ENSMUSG00000055692.12|transmembrane protein 191C 	ENSMUST00000159242.1|Tmem191c|ENSMUSG00000055692.12|transmembrane protein 191C
mm10_v2_chr3_-_89998656_89998704	0.0920995	Ctcfl_Ctcf	ENSMUST00000079724.4|Hax1|ENSMUSG00000027944.9|HCLS1 associated X-1
mm10_v2_chr13_+_54621780_54621793	0.0912289	Ctcfl_Ctcf	ENSMUST00000126071.1|Faf2|ENSMUSG00000025873.9|Fas associated factor family member 2
mm10_v2_chr8_-_94918012_94918098	0.0907685	Ctcfl_Ctcf	ENSMUST00000077955.5|Ccdc102a|ENSMUSG00000063605.5|coiled-coil domain containing 102A
mm10_v2_chr8_+_66697404_66697428	0.0906487	Ctcfl_Ctcf	ENSMUST00000039303.5|Npy1r|ENSMUSG00000036437.5|neuropeptide Y receptor Y1
mm10_v2_chr7_-_31051431_31051488	0.0899764	Ctcfl_Ctcf	ENSMUST00000073892.4|Fxyd7|ENSMUSG00000036578.6|FXYD domain-containing ion transport regulator 7
mm10_v2_chr11_+_116918844_116918888	0.0897271	Ctcfl_Ctcf	ENSMUST00000103027.3|Mgat5b|ENSMUSG00000043857.10|mannoside acetylglucosaminyltransferase 5, isoenzyme B
mm10_v2_chr13_-_113618549_113618565	0.0879614	Ctcfl_Ctcf	ENSMUST00000109241.3|Snx18|ENSMUSG00000042364.10|sorting nexin 18
mm10_v2_chr6_+_83349446_83349496	0.0879256	Ctcfl_Ctcf	ENSMUST00000136501.1|Bola3|ENSMUSG00000045160.8|bolA-like 3 (E. coli)
mm10_v2_chr4_+_43441939_43441939	0.0876162	Ctcfl_Ctcf	ENSMUST00000060864.6|Tesk1|ENSMUSG00000028458.6|testis specific protein kinase 1
mm10_v2_chr13_-_12106945_12106984	0.0872967	Ctcfl_Ctcf	ENSMUST00000021750.7|Ryr2|ENSMUSG00000021313.9|ryanodine receptor 2, cardiac 	ENSMUST00000170156.2|Ryr2|ENSMUSG00000021313.9|ryanodine receptor 2, cardiac
mm10_v2_chr7_-_90265402_90265444	0.0859255	Ctcfl_Ctcf	ENSMUST00000107221.1|Ccdc83|ENSMUSG00000030617.6|coiled-coil domain containing 83 	ENSMUST00000107220.1|Ccdc83|ENSMUSG00000030617.6|coiled-coil domain containing 83 	ENSMUST00000040413.1|Ccdc83|ENSMUSG00000030617.6|coiled-coil domain containing 83
mm10_v2_chr11_-_103101609_103101662	0.0847749	Ctcfl_Ctcf	ENSMUST00000103077.1|Plcd3|ENSMUSG00000020937.8|phospholipase C, delta 3
mm10_v2_chr11_-_94549165_94549222	0.0844515	Ctcfl_Ctcf	ENSMUST00000040487.3|Rsad1|ENSMUSG00000039096.4|radical S-adenosyl methionine domain containing 1
mm10_v2_chr1_-_143776973_143777068	0.082979	Ctcfl_Ctcf	ENSMUST00000159879.1|Trove2|ENSMUSG00000018199.8|TROVE domain family, member 2
mm10_v2_chr8_-_95488774_95488852	0.0827688	Ctcfl_Ctcf	ENSMUST00000056919.7|Csnk2a2|ENSMUSG00000046707.8|casein kinase 2, alpha prime polypeptide
mm10_v2_chr1_-_182517447_182517525	0.0825651	Ctcfl_Ctcf	ENSMUST00000068505.8|Capn2|ENSMUSG00000026509.10|calpain 2
mm10_v2_chr4_-_129121234_129121315	0.0800856	Ctcfl_Ctcf	ENSMUST00000030572.3|Hpca|ENSMUSG00000028785.6|hippocalcin
mm10_v2_chr17_-_29237759_29237827	0.0794309	Ctcfl_Ctcf	ENSMUST00000137727.1|Cpne5|ENSMUSG00000024008.9|copine V 	ENSMUST00000024805.7|Cpne5|ENSMUSG00000024008.9|copine V
mm10_v2_chr14_+_53776930_53776957	0.0784149	Ctcfl_Ctcf	ENSMUST00000103670.2|Trav3-4|ENSMUSG00000076858.2|T cell receptor alpha variable 3-4
mm10_v2_chr9_+_98955525_98955607	0.0777079	Ctcfl_Ctcf	ENSMUST00000051312.2|Foxl2|ENSMUSG00000050397.2|forkhead box L2
mm10_v2_chr1_+_161969179_161969259	0.0759192	Ctcfl_Ctcf	ENSMUST00000111594.2|Pigc|ENSMUSG00000026698.7|phosphatidylinositol glycan anchor biosynthesis, class C 	ENSMUST00000028021.6|Pigc|ENSMUSG00000026698.7|phosphatidylinositol glycan anchor biosynthesis, class C
mm10_v2_chr16_-_84735742_84735795	0.0751945	Ctcfl_Ctcf	ENSMUST00000116584.1|Mrpl39|ENSMUSG00000022889.7|mitochondrial ribosomal protein L39
mm10_v2_chr19_-_24225015_24225033	0.0747279	Ctcfl_Ctcf	ENSMUST00000099558.4|Tjp2|ENSMUSG00000024812.9|tight junction protein 2
mm10_v2_chr3_-_103737995_103738006	0.0745438	Ctcfl_Ctcf	ENSMUST00000029440.8|Olfml3|ENSMUSG00000027848.10|olfactomedin-like 3
mm10_v2_chr6_+_83101565_83101617	0.0734223	Ctcfl_Ctcf	ENSMUST00000101254.3|Ccdc142|ENSMUSG00000079511.3|coiled-coil domain containing 142
mm10_v2_chr11_-_35834492_35834509	0.0734088	Ctcfl_Ctcf	ENSMUST00000018992.3|Rars|ENSMUSG00000018848.4|arginyl-tRNA synthetase
mm10_v2_chr13_-_54749627_54749697	0.0719827	Ctcfl_Ctcf	ENSMUST00000099506.1|Gprin1|ENSMUSG00000069227.4|G protein-regulated inducer of neurite outgrowth 1
mm10_v2_chr10_-_80399389_80399428	0.0709936	Ctcfl_Ctcf	ENSMUST00000105348.1|Mbd3|ENSMUSG00000035478.8|methyl-CpG binding domain protein 3
mm10_v2_chr7_+_49778334_49778389	0.0689873	Ctcfl_Ctcf	ENSMUST00000140656.1|Prmt3|ENSMUSG00000030505.10|protein arginine N-methyltransferase 3 	ENSMUST00000032715.6|Prmt3|ENSMUSG00000030505.10|protein arginine N-methyltransferase 3
mm10_v2_chr11_-_100414829_100414852	0.0677893	Ctcfl_Ctcf	ENSMUST00000066489.6|Leprel4|ENSMUSG00000006931.9|leprecan-like 4
mm10_v2_chr1_+_192190771_192190821	0.0673134	Ctcfl_Ctcf	ENSMUST00000078470.5|Kcnh1|ENSMUSG00000058248.6|potassium voltage-gated channel, subfamily H (eag-related), member 1 	ENSMUST00000110844.1|Kcnh1|ENSMUSG00000058248.6|potassium voltage-gated channel, subfamily H (eag-related), member 1
mm10_v2_chr2_-_117342709_117342822	0.0670397	Ctcfl_Ctcf	ENSMUST00000173541.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1 	ENSMUST00000172901.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1 	ENSMUST00000173252.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1
mm10_v2_chr4_+_127243784_127243856	0.0663138	Ctcfl_Ctcf	ENSMUST00000142029.1|Smim12|ENSMUSG00000042380.8|small integral membrane protein 12
mm10_v2_chr19_+_60144682_60144697	0.0657406	Ctcfl_Ctcf	ENSMUST00000065383.4|E330013P04Rik|ENSMUSG00000053117.4|RIKEN cDNA E330013P04 gene
mm10_v2_chr10_-_9675163_9675243	0.0657307	Ctcfl_Ctcf	ENSMUST00000100070.2|Samd5|ENSMUSG00000060487.5|sterile alpha motif domain containing 5
mm10_v2_chr16_+_16302955_16302987	0.0655787	Ctcfl_Ctcf	ENSMUST00000159962.1|Yars2|ENSMUSG00000022792.10|tyrosyl-tRNA synthetase 2 (mitochondrial) 	ENSMUST00000059955.8|Yars2|ENSMUSG00000022792.10|tyrosyl-tRNA synthetase 2 (mitochondrial)
mm10_v2_chr3_-_130060850_130060907	0.0649947	Ctcfl_Ctcf	ENSMUST00000001079.8|Sec24b|ENSMUSG00000001052.9|Sec24 related gene family, member B (S. cerevisiae)
mm10_v2_chr18_+_34777008_34777075	0.0610305	Ctcfl_Ctcf	ENSMUST00000043775.7|Kdm3b|ENSMUSG00000038773.10|KDM3B lysine (K)-specific demethylase 3B
mm10_v2_chr14_+_25694170_25694233	0.0608946	Ctcfl_Ctcf	ENSMUST00000022419.6|Ppif|ENSMUSG00000021868.6|peptidylprolyl isomerase F (cyclophilin F)
mm10_v2_chr12_+_78861693_78861819	0.0608371	Ctcfl_Ctcf	ENSMUST00000071230.7|Eif2s1|ENSMUSG00000021116.9|eukaryotic translation initiation factor 2, subunit 1 alpha
mm10_v2_chr16_+_96145391_96145448	0.0599518	Ctcfl_Ctcf	ENSMUST00000023913.8|Wrb|ENSMUSG00000023147.9|tryptophan rich basic protein 	ENSMUST00000135448.1|Wrb|ENSMUSG00000023147.9|tryptophan rich basic protein
mm10_v2_chr4_-_63622414_63622417	0.0598167	Ctcfl_Ctcf	ENSMUST00000102861.1|1700018C11Rik|ENSMUSG00000058935.8|RIKEN cDNA 1700018C11 gene
mm10_v2_chr9_-_44268156_44268187	0.0590435	Ctcfl_Ctcf	ENSMUST00000169651.1|Nlrx1|ENSMUSG00000032109.8|NLR family member X1
mm10_v2_chr2_-_121442574_121442614	0.0589333	Ctcfl_Ctcf	ENSMUST00000116432.1|Ell3|ENSMUSG00000027246.6|elongation factor RNA polymerase II-like 3
mm10_v2_chr7_+_143069249_143069544	0.0565927	Ctcfl_Ctcf	ENSMUST00000060433.3|Tssc4|ENSMUSG00000045752.6|tumor-suppressing subchromosomal transferable fragment 4 	ENSMUST00000133410.2|Tssc4|ENSMUSG00000045752.6|tumor-suppressing subchromosomal transferable fragment 4 	ENSMUST00000105920.1|Tssc4|ENSMUSG00000045752.6|tumor-suppressing subchromosomal transferable fragment 4 	ENSMUST00000177841.1|Tssc4|ENSMUSG00000045752.6|tumor-suppressing subchromosomal transferable fragment 4 	ENSMUST00000147995.1|Tssc4|ENSMUSG00000045752.6|tumor-suppressing subchromosomal transferable fragment 4 	ENSMUST00000137856.1|Tssc4|ENSMUSG00000045752.6|tumor-suppressing subchromosomal transferable fragment 4
mm10_v2_chr10_+_88379127_88379169	0.0563247	Ctcfl_Ctcf	ENSMUST00000127615.1|Gnptab|ENSMUSG00000035311.10|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
mm10_v2_chr11_+_96133786_96133786	0.056085	Ctcfl_Ctcf	ENSMUST00000167258.1|Ttll6|ENSMUSG00000038756.7|tubulin tyrosine ligase-like family, member 6
mm10_v2_chr17_+_27685197_27685233	0.055284	Ctcfl_Ctcf	ENSMUST00000097360.2|Pacsin1|ENSMUSG00000040276.8|protein kinase C and casein kinase substrate in neurons 1
mm10_v2_chr7_+_110627650_110627669	0.0548747	Ctcfl_Ctcf	ENSMUST00000033054.8|Adm|ENSMUSG00000030790.8|adrenomedullin
mm10_v2_chr2_-_91649785_91649796	0.0540537	Ctcfl_Ctcf	ENSMUST00000111333.1|Zfp408|ENSMUSG00000075040.3|zinc finger protein 408
mm10_v2_chr5_-_115652974_115652992	0.0539222	Ctcfl_Ctcf	ENSMUST00000121746.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64 	ENSMUST00000118576.1|Ccdc64|ENSMUSG00000041609.10|coiled-coil domain containing 64
mm10_v2_chr3_-_136326038_136326060	0.053643	Ctcfl_Ctcf	ENSMUST00000041577.8|Bank1|ENSMUSG00000037922.9|B cell scaffold protein with ankyrin repeats 1
mm10_v2_chr9_-_110101010_110101087	0.0534637	Ctcfl_Ctcf	ENSMUST00000062368.6|Dhx30|ENSMUSG00000032480.11|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm10_v2_chrX_+_159532655_159532668	0.0528266	Ctcfl_Ctcf	ENSMUST00000112464.1|A830080D01Rik|ENSMUSG00000044150.6|RIKEN cDNA A830080D01 gene
mm10_v2_chr12_-_114406773_114406773	0.0524041	Ctcfl_Ctcf	ENSMUST00000177949.1|Ighv6-4|ENSMUSG00000094174.1|immunoglobulin heavy variable V6-4
mm10_v2_chr11_+_69632927_69633002	0.0521681	Ctcfl_Ctcf	ENSMUST00000018909.3|Fxr2|ENSMUSG00000018765.5|fragile X mental retardation, autosomal homolog 2
mm10_v2_chr13_-_74292297_74292331	0.0510645	Ctcfl_Ctcf	ENSMUST00000109640.1|Ahrr|ENSMUSG00000021575.9|aryl-hydrocarbon receptor repressor 	ENSMUST00000022059.7|Ahrr|ENSMUSG00000021575.9|aryl-hydrocarbon receptor repressor
mm10_v2_chr12_-_84876479_84876532	0.0488095	Ctcfl_Ctcf	ENSMUST00000163189.1|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2 	ENSMUST00000110254.2|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2 	ENSMUST00000002073.6|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2
mm10_v2_chr5_+_107900502_107900577	0.0476105	Ctcfl_Ctcf	ENSMUST00000082223.6|Rpl5|ENSMUSG00000058558.6|ribosomal protein L5
mm10_v2_chr9_+_106477269_106477352	0.0473787	Ctcfl_Ctcf	ENSMUST00000047721.8|Rrp9|ENSMUSG00000041506.8|RRP9, small subunit (SSU) processome component, homolog (yeast)
mm10_v2_chr3_-_154597045_154597104	0.0463773	Ctcfl_Ctcf	ENSMUST00000052774.1|Tyw3|ENSMUSG00000047583.3|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) 	ENSMUST00000170461.1|Tyw3|ENSMUSG00000047583.3|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) 	ENSMUST00000122976.1|Tyw3|ENSMUSG00000047583.3|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
mm10_v2_chr9_-_109059711_109059771	0.0439009	Ctcfl_Ctcf	ENSMUST00000061973.4|Trex1|ENSMUSG00000049734.8|three prime repair exonuclease 1
mm10_v2_chr5_+_120649188_120649259	0.043636	Ctcfl_Ctcf	ENSMUST00000156722.1|Rasal1|ENSMUSG00000029602.5|RAS protein activator like 1 (GAP1 like)
mm10_v2_chr5_-_41844168_41844329	0.0434812	Ctcfl_Ctcf	ENSMUST00000050556.7|Bod1l|ENSMUSG00000061755.7|biorientation of chromosomes in cell division 1-like
mm10_v2_chr7_-_45136391_45136451	0.0421373	Ctcfl_Ctcf	ENSMUST00000146760.1|Flt3l|ENSMUSG00000089989.3|FMS-like tyrosine kinase 3 ligand
mm10_v2_chr18_+_37411674_37411674	0.0416273	Ctcfl_Ctcf	ENSMUST00000051126.2|Pcdhb10|ENSMUSG00000045657.2|protocadherin beta 10
mm10_v2_chr8_+_33599608_33599655	0.0408548	Ctcfl_Ctcf	ENSMUST00000009774.9|Ppp2cb|ENSMUSG00000009630.9|protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform
mm10_v2_chr8_+_33516730_33516744	0.0402559	Ctcfl_Ctcf	ENSMUST00000149399.1|Tex15|ENSMUSG00000009628.8|testis expressed gene 15
mm10_v2_chr1_+_92910805_92910834	0.0400151	Ctcfl_Ctcf	ENSMUST00000179711.1|Rnpepl1|ENSMUSG00000026269.8|arginyl aminopeptidase (aminopeptidase B)-like 1
mm10_v2_chr14_+_53454296_53454327	0.039	Ctcfl_Ctcf	ENSMUST00000180711.1|Trav6-4|ENSMUSG00000094468.4|T cell receptor alpha variable 6-4 	ENSMUST00000184650.1|Trav6-4|ENSMUSG00000094468.4|T cell receptor alpha variable 6-4
mm10_v2_chr15_+_74709161_74709161	0.0389721	Ctcfl_Ctcf	ENSMUST00000056711.1|4933427E11Rik|ENSMUSG00000044276.1|RIKEN cDNA 4933427E11 gene
mm10_v2_chrX_+_42149288_42149412	0.0384128	Ctcfl_Ctcf	ENSMUST00000115073.2|Stag2|ENSMUSG00000025862.8|stromal antigen 2 	ENSMUST00000115072.1|Stag2|ENSMUSG00000025862.8|stromal antigen 2
mm10_v2_chr14_+_53324632_53324632	0.038388	Ctcfl_Ctcf	ENSMUST00000178100.1|Trav7n-6|ENSMUSG00000095415.1|T cell receptor alpha variable 7N-6
mm10_v2_chr3_+_122245557_122245578	0.0381362	Ctcfl_Ctcf	ENSMUST00000029769.7|Gclm|ENSMUSG00000028124.9|glutamate-cysteine ligase, modifier subunit
mm10_v2_chr8_+_71464910_71465000	0.0376646	Ctcfl_Ctcf	ENSMUST00000048914.6|Mrpl34|ENSMUSG00000034880.6|mitochondrial ribosomal protein L34
mm10_v2_chrX_+_20425688_20425762	0.0369722	Ctcfl_Ctcf	ENSMUST00000115384.2|Phf16|ENSMUSG00000037315.8|PHD finger protein 16
mm10_v2_chr17_-_31855782_31855802	0.0369711	Ctcfl_Ctcf	ENSMUST00000024839.4|Sik1|ENSMUSG00000024042.6|salt inducible kinase 1
mm10_v2_chr8_+_92674289_92674289	0.0364744	Ctcfl_Ctcf	ENSMUST00000034185.6|Irx6|ENSMUSG00000031738.8|Iroquois related homeobox 6 (Drosophila)
mm10_v2_chr6_-_29179584_29179584	0.0348195	Ctcfl_Ctcf	ENSMUST00000159200.1|Prrt4|ENSMUSG00000079654.3|proline-rich transmembrane protein 4
mm10_v2_chr11_-_93968242_93968281	0.0345255	Ctcfl_Ctcf	ENSMUST00000107844.2|Nme1|ENSMUSG00000037601.5|NME/NM23 nucleoside diphosphate kinase 1
mm10_v2_chr11_-_82890541_82890626	0.0340959	Ctcfl_Ctcf	ENSMUST00000092844.6|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D 	ENSMUST00000021033.9|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D 	ENSMUST00000018985.8|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D
mm10_v2_chr11_-_69880971_69880985	0.0337925	Ctcfl_Ctcf	ENSMUST00000050555.3|Kctd11|ENSMUSG00000046731.3|potassium channel tetramerisation domain containing 11
mm10_v2_chr11_+_98682554_98682573	0.0330113	Ctcfl_Ctcf	ENSMUST00000017365.8|Psmd3|ENSMUSG00000017221.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
mm10_v2_chr8_-_41417042_41417135	0.032873	Ctcfl_Ctcf	ENSMUST00000033999.6|Frg1|ENSMUSG00000031590.7|FSHD region gene 1
mm10_v2_chr16_+_95702044_95702094	0.0320806	Ctcfl_Ctcf	ENSMUST00000023612.8|Ets2|ENSMUSG00000022895.8|E26 avian leukemia oncogene 2, 3' domain
mm10_v2_chr10_-_80399478_80399550	0.0311205	Ctcfl_Ctcf	ENSMUST00000092295.3|Mbd3|ENSMUSG00000035478.8|methyl-CpG binding domain protein 3 	ENSMUST00000105349.1|Mbd3|ENSMUSG00000035478.8|methyl-CpG binding domain protein 3
mm10_v2_chr2_-_91649751_91649784	0.0292121	Ctcfl_Ctcf	ENSMUST00000099714.3|Zfp408|ENSMUSG00000075040.3|zinc finger protein 408
mm10_v2_chr5_+_35057059_35057096	0.0291889	Ctcfl_Ctcf	ENSMUST00000050709.3|Dok7|ENSMUSG00000044716.6|docking protein 7
mm10_v2_chr18_+_74442551_74442631	0.0288489	Ctcfl_Ctcf	ENSMUST00000121875.1|Myo5b|ENSMUSG00000025885.12|myosin VB
mm10_v2_chr3_-_96594128_96594181	0.027699	Ctcfl_Ctcf	ENSMUST00000145001.1|Polr3gl|ENSMUSG00000028104.8|polymerase (RNA) III (DNA directed) polypeptide G like 	ENSMUST00000091924.3|Polr3gl|ENSMUSG00000028104.8|polymerase (RNA) III (DNA directed) polypeptide G like
mm10_v2_chr5_+_35056813_35056895	0.0267636	Ctcfl_Ctcf	ENSMUST00000101298.2|Dok7|ENSMUSG00000044716.6|docking protein 7 	ENSMUST00000114270.1|Dok7|ENSMUSG00000044716.6|docking protein 7 	ENSMUST00000133381.1|Dok7|ENSMUSG00000044716.6|docking protein 7
mm10_v2_chr5_+_147957310_147957357	0.0265459	Ctcfl_Ctcf	ENSMUST00000085558.4|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2 	ENSMUST00000129092.1|Mtus2|ENSMUSG00000029651.10|microtubule associated tumor suppressor candidate 2
mm10_v2_chr9_-_121642096_121642096	0.0260784	Ctcfl_Ctcf	ENSMUST00000120918.1|Lyzl4|ENSMUSG00000032530.7|lysozyme-like 4
mm10_v2_chr9_-_57645561_57645672	0.0252591	Ctcfl_Ctcf	ENSMUST00000034863.6|Csk|ENSMUSG00000032312.6|c-src tyrosine kinase
mm10_v2_chr11_-_114795888_114795903	0.0243955	Ctcfl_Ctcf	ENSMUST00000000206.3|Btbd17|ENSMUSG00000000202.3|BTB (POZ) domain containing 17
mm10_v2_chr10_+_84622365_84622437	0.0241168	Ctcfl_Ctcf	ENSMUST00000077175.5|Polr3b|ENSMUSG00000034453.7|polymerase (RNA) III (DNA directed) polypeptide B
mm10_v2_chr2_-_26352067_26352115	0.0236612	Ctcfl_Ctcf	ENSMUST00000028295.8|Dnlz|ENSMUSG00000075467.4|DNL-type zinc finger
mm10_v2_chr18_-_10610346_10610363	0.0228456	Ctcfl_Ctcf	ENSMUST00000025142.5|Esco1|ENSMUSG00000024293.9|establishment of cohesion 1 homolog 1 (S. cerevisiae)
mm10_v2_chr17_+_28530834_28530879	0.0227388	Ctcfl_Ctcf	ENSMUST00000025060.2|Armc12|ENSMUSG00000024223.2|armadillo repeat containing 12
mm10_v2_chr2_+_131210363_131210476	0.0221482	Ctcfl_Ctcf	ENSMUST00000110210.1|Ap5s1|ENSMUSG00000068264.5|adaptor-related protein 5 complex, sigma 1 subunit 	ENSMUST00000089506.5|Ap5s1|ENSMUSG00000068264.5|adaptor-related protein 5 complex, sigma 1 subunit 	ENSMUST00000110208.1|Ap5s1|ENSMUSG00000068264.5|adaptor-related protein 5 complex, sigma 1 subunit
mm10_v2_chr1_+_150392794_150392849	0.0214608	Ctcfl_Ctcf	ENSMUST00000124973.2|Tpr|ENSMUSG00000006005.11|translocated promoter region
mm10_v2_chr8_-_105413473_105413526	0.0213784	Ctcfl_Ctcf	ENSMUST00000167294.1|Kctd19|ENSMUSG00000051648.7|potassium channel tetramerisation domain containing 19 	ENSMUST00000063071.6|Kctd19|ENSMUSG00000051648.7|potassium channel tetramerisation domain containing 19
mm10_v2_chr2_+_164460945_164461018	0.0209122	Ctcfl_Ctcf	ENSMUST00000072452.4|Sys1|ENSMUSG00000045503.10|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm10_v2_chr11_+_101246960_101247093	0.0206962	Ctcfl_Ctcf	ENSMUST00000107282.3|Ramp2|ENSMUSG00000001240.7|receptor (calcitonin) activity modifying protein 2
mm10_v2_chr11_-_93968293_93968308	0.0204162	Ctcfl_Ctcf	ENSMUST00000170303.1|Gm20390|ENSMUSG00000091228.1|predicted gene 20390
mm10_v2_chr16_-_20302358_20302401	0.0201941	Ctcfl_Ctcf	ENSMUST00000048642.8|Parl|ENSMUSG00000033918.9|presenilin associated, rhomboid-like
mm10_v2_chr17_-_51833278_51833299	0.019748	Ctcfl_Ctcf	ENSMUST00000133574.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr11_-_120581196_120581380	0.0197186	Ctcfl_Ctcf	ENSMUST00000067936.5|Arhgdia|ENSMUSG00000025132.7|Rho GDP dissociation inhibitor (GDI) alpha
mm10_v2_chr15_+_100469034_100469075	0.0196465	Ctcfl_Ctcf	ENSMUST00000037001.8|Letmd1|ENSMUSG00000037353.8|LETM1 domain containing 1
mm10_v2_chr11_-_101894355_101894374	0.0195643	Ctcfl_Ctcf	ENSMUST00000057054.7|Meox1|ENSMUSG00000001493.9|mesenchyme homeobox 1
mm10_v2_chr11_+_82388900_82388900	0.019454	Ctcfl_Ctcf	ENSMUST00000054245.4|Tmem132e|ENSMUSG00000020701.6|transmembrane protein 132E 	ENSMUST00000092852.2|Tmem132e|ENSMUSG00000020701.6|transmembrane protein 132E
mm10_v2_chr18_-_36515798_36515812	0.0190405	Ctcfl_Ctcf	ENSMUST00000025363.5|Hbegf|ENSMUSG00000024486.5|heparin-binding EGF-like growth factor
mm10_v2_chr11_-_86757483_86757572	0.0186141	Ctcfl_Ctcf	ENSMUST00000060766.9|Cltc|ENSMUSG00000047126.11|clathrin, heavy polypeptide (Hc) 	ENSMUST00000103186.4|Cltc|ENSMUSG00000047126.11|clathrin, heavy polypeptide (Hc)
mm10_v2_chr4_-_133212480_133212536	0.0178538	Ctcfl_Ctcf	ENSMUST00000052090.8|Gpr3|ENSMUSG00000049649.8|G-protein coupled receptor 3
mm10_v2_chr6_-_137169678_137169706	0.0174668	Ctcfl_Ctcf	ENSMUST00000119610.1|Rerg|ENSMUSG00000030222.7|RAS-like, estrogen-regulated, growth-inhibitor
mm10_v2_chr4_+_88797237_88797237	0.0174359	Ctcfl_Ctcf	ENSMUST00000178602.1|Gm13279|ENSMUSG00000095694.1|predicted gene 13279
mm10_v2_chr9_+_111311674_111311758	0.0174344	Ctcfl_Ctcf	ENSMUST00000078626.3|Trank1|ENSMUSG00000062296.4|tetratricopeptide repeat and ankyrin repeat containing 1
mm10_v2_chr17_+_23660477_23660525	0.0172863	Ctcfl_Ctcf	ENSMUST00000062967.8|Ccdc64b|ENSMUSG00000043782.8|coiled-coil domain containing 64B
mm10_v2_chrX_-_94366777_94366862	0.0171106	Ctcfl_Ctcf	ENSMUST00000044989.5|4932442L08Rik|ENSMUSG00000043549.7|RIKEN cDNA 4932442L08 gene
mm10_v2_chr16_+_35541275_35541362	0.0167394	Ctcfl_Ctcf	ENSMUST00000120756.1|Sema5b|ENSMUSG00000052133.10|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
mm10_v2_chr8_+_33517306_33517325	0.016302	Ctcfl_Ctcf	ENSMUST00000124496.1|Tex15|ENSMUSG00000009628.8|testis expressed gene 15
mm10_v2_chr1_+_181352618_181352641	0.0159079	Ctcfl_Ctcf	ENSMUST00000161880.1|Cnih3|ENSMUSG00000026514.7|cornichon homolog 3 (Drosophila) 	ENSMUST00000027795.7|Cnih3|ENSMUSG00000026514.7|cornichon homolog 3 (Drosophila)
mm10_v2_chr11_+_50225315_50225429	0.0157414	Ctcfl_Ctcf	ENSMUST00000041725.7|Mgat4b|ENSMUSG00000036620.8|mannoside acetylglucosaminyltransferase 4, isoenzyme B
mm10_v2_chr8_+_83566671_83566815	0.0140978	Ctcfl_Ctcf	ENSMUST00000036996.5|Ndufb7|ENSMUSG00000033938.5|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7
mm10_v2_chr9_+_118606687_118606751	0.0132605	Ctcfl_Ctcf	ENSMUST00000044165.7|Itga9|ENSMUSG00000039115.7|integrin alpha 9
mm10_v2_chr9_+_120303896_120303960	0.0125342	Ctcfl_Ctcf	ENSMUST00000048121.6|Myrip|ENSMUSG00000041794.6|myosin VIIA and Rab interacting protein
mm10_v2_chr11_-_82871133_82871210	0.012116	Ctcfl_Ctcf	ENSMUST00000071152.7|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000108173.3|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein
mm10_v2_chr6_+_88084473_88084527	0.0103662	Ctcfl_Ctcf	ENSMUST00000032143.6|Rpn1|ENSMUSG00000030062.6|ribophorin I
mm10_v2_chr10_-_14705459_14705560	0.00934605	Ctcfl_Ctcf	ENSMUST00000149485.1|Vta1|ENSMUSG00000019868.10|Vps20-associated 1 homolog (S. cerevisiae) 	ENSMUST00000154132.1|Vta1|ENSMUSG00000019868.10|Vps20-associated 1 homolog (S. cerevisiae)
mm10_v2_chr1_-_55363319_55363364	0.00786617	Ctcfl_Ctcf	ENSMUST00000087585.3|Boll|ENSMUSG00000025977.9|bol, boule-like (Drosophila)
mm10_v2_chr2_-_71055534_71055611	0.00689896	Ctcfl_Ctcf	ENSMUST00000090849.5|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8 	ENSMUST00000100037.2|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8 	ENSMUST00000112186.2|Mettl8|ENSMUSG00000041975.11|methyltransferase like 8
mm10_v2_chr10_+_25359798_25359844	0.00650385	Ctcfl_Ctcf	ENSMUST00000053748.8|Epb4.1l2|ENSMUSG00000019978.9|erythrocyte protein band 4.1-like 2
mm10_v2_chr12_+_55565188_55565257	0.00635347	Ctcfl_Ctcf	ENSMUST00000080123.1|Aldoart2|ENSMUSG00000063129.1|aldolase 1 A, retrogene 2
mm10_v2_chr12_+_16653470_16653486	0.00547329	Ctcfl_Ctcf	ENSMUST00000111064.1|Ntsr2|ENSMUSG00000020591.10|neurotensin receptor 2
mm10_v2_chr8_-_123515333_123515437	0.00495114	Ctcfl_Ctcf	ENSMUST00000177240.1|Dbndd1|ENSMUSG00000031970.10|dysbindin (dystrobrevin binding protein 1) domain containing 1
mm10_v2_chr12_-_8301954_8301995	0.00480737	Ctcfl_Ctcf	ENSMUST00000037313.4|Gdf7|ENSMUSG00000037660.4|growth differentiation factor 7
mm10_v2_chr1_+_9545397_9545479	0.0043855	Ctcfl_Ctcf	ENSMUST00000072079.7|Rrs1|ENSMUSG00000061024.7|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
mm10_v2_chr12_+_8313425_8313454	0.00327647	Ctcfl_Ctcf	ENSMUST00000020927.8|Hs1bp3|ENSMUSG00000020605.8|HCLS1 binding protein 3
mm10_v2_chr18_+_37020097_37020230	0.00304489	Ctcfl_Ctcf	ENSMUST00000047614.1|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chr3_+_89245952_89245978	0.00273283	Ctcfl_Ctcf	ENSMUST00000040888.5|Krtcap2|ENSMUSG00000042747.6|keratinocyte associated protein 2
mm10_v2_chr11_-_115322025_115322064	0.00167973	Ctcfl_Ctcf	ENSMUST00000103037.4|Ush1g|ENSMUSG00000045288.10|Usher syndrome 1G
