mm10_v2_chr13_+_89540636_89540678	0.146497	CCAGCAU	ENSMUST00000022108.7|Hapln1|ENSMUSG00000021613.8|hyaluronan and proteoglycan link protein 1
mm10_v2_chr8_+_76899772_76899828	0.125213	CCAGCAU	ENSMUST00000109913.2|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2
mm10_v2_chr8_-_41133697_41133755	0.116373	CCAGCAU	ENSMUST00000155055.1|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1 	ENSMUST00000059115.6|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1 	ENSMUST00000145860.1|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1
mm10_v2_chr18_-_16809233_16809324	0.109367	CCAGCAU	ENSMUST00000025166.7|Cdh2|ENSMUSG00000024304.8|cadherin 2
mm10_v2_chr10_+_53337686_53337724	0.108245	CCAGCAU	ENSMUST00000046221.6|Pln|ENSMUSG00000038583.6|phospholamban 	ENSMUST00000163319.1|Pln|ENSMUSG00000038583.6|phospholamban
mm10_v2_chr7_-_119895697_119895752	0.107471	CCAGCAU	ENSMUST00000059851.6|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr2_-_52676571_52676588	0.0984376	CCAGCAU	ENSMUST00000178799.1|Cacnb4|ENSMUSG00000017412.9|calcium channel, voltage-dependent, beta 4 subunit
mm10_v2_chr4_+_97777606_97777632	0.0977038	CCAGCAU	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr6_-_134792596_134792682	0.0941655	CCAGCAU	ENSMUST00000100857.3|Dusp16|ENSMUSG00000030203.11|dual specificity phosphatase 16
mm10_v2_chr3_-_89387132_89387189	0.0855217	CCAGCAU	ENSMUST00000107433.1|Zbtb7b|ENSMUSG00000028042.9|zinc finger and BTB domain containing 7B
mm10_v2_chr9_-_120023558_120023598	0.0840225	CCAGCAU	ENSMUST00000111635.2|Xirp1|ENSMUSG00000079243.2|xin actin-binding repeat containing 1
mm10_v2_chr4_-_140665891_140666012	0.0838646	CCAGCAU	ENSMUST00000069623.5|Arhgef10l|ENSMUSG00000040964.10|Rho guanine nucleotide exchange factor (GEF) 10-like
mm10_v2_chr19_-_37330613_37330613	0.0831858	CCAGCAU	ENSMUST00000131070.1|Ide|ENSMUSG00000056999.8|insulin degrading enzyme
mm10_v2_chr11_-_20112876_20112925	0.079712	CCAGCAU	ENSMUST00000000137.7|Actr2|ENSMUSG00000020152.7|ARP2 actin-related protein 2
mm10_v2_chr7_-_90457167_90457229	0.061114	CCAGCAU	ENSMUST00000032844.5|Tmem126a|ENSMUSG00000030615.5|transmembrane protein 126A
mm10_v2_chr17_+_8165501_8165540	0.059212	CCAGCAU	ENSMUST00000097419.3|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner 	ENSMUST00000024636.8|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner
mm10_v2_chr19_-_58860975_58860997	0.057224	CCAGCAU	ENSMUST00000066285.4|Hspa12a|ENSMUSG00000025092.6|heat shock protein 12A
mm10_v2_chr10_+_18407658_18407715	0.0566914	CCAGCAU	ENSMUST00000037341.7|Nhsl1|ENSMUSG00000039835.9|NHS-like 1
mm10_v2_chr11_+_5520652_5520659	0.054182	CCAGCAU	ENSMUST00000063084.9|Xbp1|ENSMUSG00000020484.12|X-box binding protein 1
mm10_v2_chr11_-_96075655_96075677	0.0539405	CCAGCAU	ENSMUST00000090541.5|Atp5g1|ENSMUSG00000006057.9|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)
mm10_v2_chr7_-_133123312_133123377	0.0534719	CCAGCAU	ENSMUST00000171022.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000163601.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000165534.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000124096.1|Fgfr2|ENSMUSG00000030849.11|fibroblast growth factor receptor 2 	ENSMUST00000033269.8|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr8_-_89044162_89044195	0.0524768	CCAGCAU	ENSMUST00000034090.6|Sall1|ENSMUSG00000031665.6|sal-like 1 (Drosophila)
mm10_v2_chr6_+_72414301_72414319	0.0518591	CCAGCAU	ENSMUST00000065906.7|Ggcx|ENSMUSG00000053460.7|gamma-glutamyl carboxylase
mm10_v2_chr3_+_41555723_41555745	0.0513055	CCAGCAU	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr11_+_72607221_72607307	0.0500323	CCAGCAU	ENSMUST00000021148.6|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1 	ENSMUST00000138247.1|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1
mm10_v2_chr19_-_47464406_47464450	0.0497359	CCAGCAU	ENSMUST00000111800.2|Sh3pxd2a|ENSMUSG00000053617.5|SH3 and PX domains 2A 	ENSMUST00000081619.2|Sh3pxd2a|ENSMUSG00000053617.5|SH3 and PX domains 2A
mm10_v2_chr16_+_35022394_35022440	0.0495825	CCAGCAU	ENSMUST00000061156.8|Ptplb|ENSMUSG00000035376.9|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b
mm10_v2_chr6_+_8948608_8948619	0.0492063	CCAGCAU	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr11_-_96824008_96824159	0.0486638	CCAGCAU	ENSMUST00000142065.1|Nfe2l1|ENSMUSG00000038615.11|nuclear factor, erythroid derived 2,-like 1 	ENSMUST00000167110.1|Nfe2l1|ENSMUSG00000038615.11|nuclear factor, erythroid derived 2,-like 1 	ENSMUST00000169828.1|Nfe2l1|ENSMUSG00000038615.11|nuclear factor, erythroid derived 2,-like 1 	ENSMUST00000126949.1|Nfe2l1|ENSMUSG00000038615.11|nuclear factor, erythroid derived 2,-like 1
mm10_v2_chr19_-_34747289_34747313	0.0466479	CCAGCAU	ENSMUST00000009522.3|Slc16a12|ENSMUSG00000009378.3|solute carrier family 16 (monocarboxylic acid transporters), member 12
mm10_v2_chr10_-_31609184_31609184	0.0465786	CCAGCAU	ENSMUST00000081989.6|Rnf217|ENSMUSG00000063760.8|ring finger protein 217
mm10_v2_chr4_-_151861762_151861876	0.046143	CCAGCAU	ENSMUST00000097774.2|Camta1|ENSMUSG00000014592.13|calmodulin binding transcription activator 1
mm10_v2_chr2_-_52424826_52424916	0.0439885	CCAGCAU	ENSMUST00000036541.7|Arl5a|ENSMUSG00000036093.7|ADP-ribosylation factor-like 5A
mm10_v2_chr15_+_34082664_34082734	0.0426662	CCAGCAU	ENSMUST00000022865.9|Mtdh|ENSMUSG00000022255.9|metadherin
mm10_v2_chr7_-_144939823_144939869	0.0423571	CCAGCAU	ENSMUST00000093962.4|Ccnd1|ENSMUSG00000070348.4|cyclin D1
mm10_v2_chr12_-_56535047_56535106	0.042326	CCAGCAU	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr18_+_32163073_32163115	0.0421847	CCAGCAU	ENSMUST00000096575.3|Map3k2|ENSMUSG00000024383.8|mitogen-activated protein kinase kinase kinase 2
mm10_v2_chr16_-_10993100_10993121	0.0419414	CCAGCAU	ENSMUST00000023143.7|Litaf|ENSMUSG00000022500.8|LPS-induced TN factor
mm10_v2_chr1_+_177444653_177444669	0.0407903	CCAGCAU	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr6_-_113195380_113195387	0.0403004	CCAGCAU	ENSMUST00000162280.1|Lhfpl4|ENSMUSG00000042873.10|lipoma HMGIC fusion partner-like protein 4
mm10_v2_chr4_-_149099802_149099876	0.039813	CCAGCAU	ENSMUST00000103217.4|Pex14|ENSMUSG00000028975.10|peroxisomal biogenesis factor 14
mm10_v2_chr18_+_11052487_11052510	0.0396513	CCAGCAU	ENSMUST00000047762.7|Gata6|ENSMUSG00000005836.8|GATA binding protein 6
mm10_v2_chr1_+_120602405_120602418	0.0392142	CCAGCAU	ENSMUST00000079721.7|En1|ENSMUSG00000058665.7|engrailed 1
mm10_v2_chr3_-_116007399_116007411	0.0356802	CCAGCAU	ENSMUST00000067485.3|Slc30a7|ENSMUSG00000054414.3|solute carrier family 30 (zinc transporter), member 7
mm10_v2_chrX_-_141725181_141725263	0.0334721	CCAGCAU	ENSMUST00000067841.7|Irs4|ENSMUSG00000054667.7|insulin receptor substrate 4
mm10_v2_chr5_-_30960236_30960320	0.0329015	CCAGCAU	ENSMUST00000088063.2|Preb|ENSMUSG00000045302.7|prolactin regulatory element binding
mm10_v2_chr3_+_103279293_103279293	0.0324554	CCAGCAU	ENSMUST00000029444.6|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33 	ENSMUST00000106860.1|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33
mm10_v2_chr4_-_56990332_56990396	0.0305019	CCAGCAU	ENSMUST00000053681.5|Frrs1l|ENSMUSG00000045589.7|ferric-chelate reductase 1 like
mm10_v2_chr15_+_4375462_4375511	0.0297304	CCAGCAU	ENSMUST00000061925.4|Plcxd3|ENSMUSG00000049148.8|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm10_v2_chr17_+_30005029_30005098	0.0295723	CCAGCAU	ENSMUST00000057897.7|Zfand3|ENSMUSG00000044477.10|zinc finger, AN1-type domain 3
mm10_v2_chr7_-_99858872_99858906	0.0294055	CCAGCAU	ENSMUST00000036274.6|Spcs2|ENSMUSG00000035227.6|signal peptidase complex subunit 2 homolog (S. cerevisiae)
mm10_v2_chr9_+_32116040_32116136	0.0286203	CCAGCAU	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr2_-_160367057_160367073	0.028284	CCAGCAU	ENSMUST00000099126.3|Mafb|ENSMUSG00000074622.3|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm10_v2_chrX_-_109013389_109013404	0.0281472	CCAGCAU	ENSMUST00000033597.8|Hmgn5|ENSMUSG00000031245.8|high-mobility group nucleosome binding domain 5
mm10_v2_chr17_-_70990751_70990819	0.0280651	CCAGCAU	ENSMUST00000038446.8|Myl12b|ENSMUSG00000034868.8|myosin, light chain 12B, regulatory
mm10_v2_chr4_-_82859571_82859679	0.0280277	CCAGCAU	ENSMUST00000156055.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21 	ENSMUST00000030110.8|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr10_+_127739516_127739592	0.0277933	CCAGCAU	ENSMUST00000054287.7|Zbtb39|ENSMUSG00000044617.7|zinc finger and BTB domain containing 39
mm10_v2_chr2_+_59612034_59612109	0.0260649	CCAGCAU	ENSMUST00000112568.1|Tanc1|ENSMUSG00000035168.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 	ENSMUST00000037526.4|Tanc1|ENSMUSG00000035168.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
mm10_v2_chr7_+_134670667_134670715	0.0253711	CCAGCAU	ENSMUST00000084488.4|Dock1|ENSMUSG00000058325.5|dedicator of cytokinesis 1
mm10_v2_chr2_-_35200923_35201120	0.0227187	CCAGCAU	ENSMUST00000028238.8|Rab14|ENSMUSG00000026878.10|RAB14, member RAS oncogene family 	ENSMUST00000113025.1|Rab14|ENSMUSG00000026878.10|RAB14, member RAS oncogene family
mm10_v2_chr14_-_78536762_78536851	0.0213413	CCAGCAU	ENSMUST00000123853.1|Akap11|ENSMUSG00000022016.9|A kinase (PRKA) anchor protein 11
mm10_v2_chr6_+_66896397_66896479	0.0208658	CCAGCAU	ENSMUST00000043148.6|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114228.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114227.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114226.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114225.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114224.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12
mm10_v2_chr4_-_133633419_133633525	0.0190163	CCAGCAU	ENSMUST00000084238.4|Zdhhc18|ENSMUSG00000037553.8|zinc finger, DHHC domain containing 18
mm10_v2_chr2_-_162661075_162661147	0.01851	CCAGCAU	ENSMUST00000109442.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109445.2|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109443.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109441.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T
mm10_v2_chr5_+_65537209_65537233	0.0176362	CCAGCAU	ENSMUST00000142407.1|Ube2k|ENSMUSG00000029203.10|ubiquitin-conjugating enzyme E2K
mm10_v2_chr16_-_67620880_67620922	0.0165835	CCAGCAU	ENSMUST00000114292.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2 	ENSMUST00000120898.1|Cadm2|ENSMUSG00000064115.7|cell adhesion molecule 2
mm10_v2_chr5_+_118169712_118169748	0.0164691	CCAGCAU	ENSMUST00000054836.6|Hrk|ENSMUSG00000046607.6|harakiri, BCL2 interacting protein (contains only BH3 domain)
mm10_v2_chr14_+_45351473_45351473	0.0159956	CCAGCAU	ENSMUST00000111835.2|Styx|ENSMUSG00000053205.8|serine/threonine/tyrosine interaction protein
mm10_v2_chr7_+_122067164_122067216	0.0159091	CCAGCAU	ENSMUST00000033158.4|Ubfd1|ENSMUSG00000030870.6|ubiquitin family domain containing 1
mm10_v2_chr19_-_43388292_43388311	0.015227	CCAGCAU	ENSMUST00000099428.3|Hpse2|ENSMUSG00000074852.3|heparanase 2
mm10_v2_chr10_+_57486354_57486414	0.0146369	CCAGCAU	ENSMUST00000079833.4|Hsf2|ENSMUSG00000019878.7|heat shock factor 2
mm10_v2_chr3_+_89773562_89773642	0.0143261	CCAGCAU	ENSMUST00000038356.8|Ube2q1|ENSMUSG00000042572.8|ubiquitin-conjugating enzyme E2Q (putative) 1
mm10_v2_chr13_-_105054895_105054930	0.0124615	CCAGCAU	ENSMUST00000063551.5|Rgs7bp|ENSMUSG00000021719.8|regulator of G-protein signalling 7 binding protein
mm10_v2_chr8_-_115707778_115707794	0.011803	CCAGCAU	ENSMUST00000109104.1|Maf|ENSMUSG00000055435.6|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm10_v2_chr16_+_4726357_4726370	0.0117592	CCAGCAU	ENSMUST00000154117.1|Hmox2|ENSMUSG00000004070.9|heme oxygenase (decycling) 2 	ENSMUST00000004172.8|Hmox2|ENSMUSG00000004070.9|heme oxygenase (decycling) 2
mm10_v2_chr3_-_158562199_158562290	0.00891029	CCAGCAU	ENSMUST00000106044.1|Lrrc7|ENSMUSG00000028176.7|leucine rich repeat containing 7
mm10_v2_chr3_+_152395991_152396059	0.00885409	CCAGCAU	ENSMUST00000106100.2|Zzz3|ENSMUSG00000039068.10|zinc finger, ZZ domain containing 3
mm10_v2_chrX_-_72918411_72918424	0.0063132	CCAGCAU	ENSMUST00000114551.3|Cetn2|ENSMUSG00000031347.6|centrin 2
mm10_v2_chr2_+_151542483_151542646	0.00615307	CCAGCAU	ENSMUST00000044011.5|Fkbp1a|ENSMUSG00000032966.8|FK506 binding protein 1a
mm10_v2_chr18_-_23041641_23041671	0.00578605	CCAGCAU	ENSMUST00000097651.3|Nol4|ENSMUSG00000041923.9|nucleolar protein 4
mm10_v2_chr10_-_112928974_112929026	0.00539605	CCAGCAU	ENSMUST00000099276.2|Atxn7l3b|ENSMUSG00000074748.2|ataxin 7-like 3B
mm10_v2_chr5_-_121009510_121009521	0.00426168	CCAGCAU	ENSMUST00000079204.5|Rph3a|ENSMUSG00000029608.7|rabphilin 3A
mm10_v2_chr7_+_19094594_19094633	0.00404807	CCAGCAU	ENSMUST00000049454.5|Six5|ENSMUSG00000040841.5|sine oculis-related homeobox 5
mm10_v2_chr2_+_30061754_30061859	0.0038883	CCAGCAU	ENSMUST00000149578.1|Set|ENSMUSG00000054766.7|SET nuclear oncogene 	ENSMUST00000102866.3|Set|ENSMUSG00000054766.7|SET nuclear oncogene
mm10_v2_chr2_+_156196642_156196775	0.00388683	CCAGCAU	ENSMUST00000037401.8|Phf20|ENSMUSG00000038116.10|PHD finger protein 20
mm10_v2_chr6_-_51469869_51469894	0.00316359	CCAGCAU	ENSMUST00000114459.1|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1 	ENSMUST00000069949.6|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1
mm10_v2_chr12_+_111166349_111166397	0.00207138	CCAGCAU	ENSMUST00000117269.1|Traf3|ENSMUSG00000021277.10|TNF receptor-associated factor 3
mm10_v2_chr16_+_17797282_17797325	0.00135941	CCAGCAU	ENSMUST00000012161.3|Scarf2|ENSMUSG00000012017.3|scavenger receptor class F, member 2
mm10_v2_chr12_-_101819048_101819061	0.00110912	CCAGCAU	ENSMUST00000021603.8|Fbln5|ENSMUSG00000021186.8|fibulin 5
mm10_v2_chr13_+_34162953_34163033	0.000793441	CCAGCAU	ENSMUST00000124996.1|Psmg4|ENSMUSG00000071451.3|proteasome (prosome, macropain) assembly chaperone 4 	ENSMUST00000147632.1|Psmg4|ENSMUSG00000071451.3|proteasome (prosome, macropain) assembly chaperone 4
mm10_v2_chr2_-_33468493_33468572	0.000229163	CCAGCAU	ENSMUST00000113156.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000028125.5|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000126442.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43
