mm10_v2_chr11_-_53480178_53480216	3.97673	CACAGUG	ENSMUST00000104955.2|Sowaha|ENSMUSG00000044352.5|sosondowah ankyrin repeat domain family member A
mm10_v2_chr12_+_109452833_109452849	3.94012	CACAGUG	ENSMUST00000056110.8|Dlk1|ENSMUSG00000040856.11|delta-like 1 homolog (Drosophila)
mm10_v2_chr11_-_102088471_102088530	3.39226	CACAGUG	ENSMUST00000017458.4|Mpp2|ENSMUSG00000017314.6|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
mm10_v2_chr9_-_42124276_42124333	2.66586	CACAGUG	ENSMUST00000060989.8|Sorl1|ENSMUSG00000049313.8|sortilin-related receptor, LDLR class A repeats-containing
mm10_v2_chrX_+_136270253_136270269	2.65795	CACAGUG	ENSMUST00000178632.1|Ngfrap1|ENSMUSG00000046432.6|nerve growth factor receptor (TNFRSF16) associated protein 1 	ENSMUST00000053540.4|Ngfrap1|ENSMUSG00000046432.6|nerve growth factor receptor (TNFRSF16) associated protein 1
mm10_v2_chr12_+_102129019_102129174	2.59449	CACAGUG	ENSMUST00000079020.4|Slc24a4|ENSMUSG00000041771.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
mm10_v2_chr4_+_49059256_49059330	2.53436	CACAGUG	ENSMUST00000076670.2|E130309F12Rik|ENSMUSG00000063446.4|RIKEN cDNA E130309F12 gene
mm10_v2_chr2_-_32083783_32083796	2.52244	CACAGUG	ENSMUST00000056406.6|Fam78a|ENSMUSG00000050592.8|family with sequence similarity 78, member A
mm10_v2_chr12_+_24831583_24831658	2.46679	CACAGUG	ENSMUST00000110942.3|Mboat2|ENSMUSG00000020646.10|membrane bound O-acyltransferase domain containing 2 	ENSMUST00000078902.6|Mboat2|ENSMUSG00000020646.10|membrane bound O-acyltransferase domain containing 2
mm10_v2_chr2_-_168767029_168767104	2.2987	CACAGUG	ENSMUST00000075044.3|Sall4|ENSMUSG00000027547.11|sal-like 4 (Drosophila)
mm10_v2_chr13_-_114932035_114932066	2.09098	CACAGUG	ENSMUST00000056117.8|Itga2|ENSMUSG00000015533.8|integrin alpha 2
mm10_v2_chr11_-_87359011_87359081	2.08646	CACAGUG	ENSMUST00000055438.4|Ppm1e|ENSMUSG00000046442.4|protein phosphatase 1E (PP2C domain containing)
mm10_v2_chr4_-_134018829_134018841	1.96083	CACAGUG	ENSMUST00000051674.2|Lin28a|ENSMUSG00000050966.3|lin-28 homolog A (C. elegans)
mm10_v2_chr3_+_146149829_146149843	1.94205	CACAGUG	ENSMUST00000011152.7|Mcoln2|ENSMUSG00000011008.7|mucolipin 2
mm10_v2_chr1_-_182019927_182019989	1.92634	CACAGUG	ENSMUST00000078719.6|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111030.3|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000177811.1|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111024.3|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111025.2|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila)
mm10_v2_chr17_+_47630690_47630690	1.92429	CACAGUG	ENSMUST00000024779.8|Usp49|ENSMUSG00000090115.1|ubiquitin specific peptidase 49
mm10_v2_chr11_+_98907801_98907824	1.92003	CACAGUG	ENSMUST00000092706.6|Cdc6|ENSMUSG00000017499.9|cell division cycle 6
mm10_v2_chr3_+_96181151_96181167	1.80917	CACAGUG	ENSMUST00000035371.8|Sv2a|ENSMUSG00000038486.8|synaptic vesicle glycoprotein 2 a
mm10_v2_chr2_-_157079212_157079276	1.78338	CACAGUG	ENSMUST00000069098.6|Soga1|ENSMUSG00000055485.6|suppressor of glucose, autophagy associated 1
mm10_v2_chr13_+_30749226_30749247	1.74988	CACAGUG	ENSMUST00000021784.2|Irf4|ENSMUSG00000021356.3|interferon regulatory factor 4 	ENSMUST00000110307.1|Irf4|ENSMUSG00000021356.3|interferon regulatory factor 4
mm10_v2_chr8_+_23411490_23411507	1.71999	CACAGUG	ENSMUST00000033952.7|Sfrp1|ENSMUSG00000031548.7|secreted frizzled-related protein 1
mm10_v2_chr1_+_86303221_86303239	1.71706	CACAGUG	ENSMUST00000113306.2|B3gnt7|ENSMUSG00000079445.2|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
mm10_v2_chr15_-_73184840_73184971	1.57308	CACAGUG	ENSMUST00000044113.10|Ago2|ENSMUSG00000036698.10|argonaute RISC catalytic subunit 2
mm10_v2_chr1_-_134079114_134079120	1.54414	CACAGUG	ENSMUST00000020692.6|Btg2|ENSMUSG00000020423.6|B cell translocation gene 2, anti-proliferative
mm10_v2_chr10_-_30655859_30655868	1.50935	CACAGUG	ENSMUST00000092610.4|Ncoa7|ENSMUSG00000039697.9|nuclear receptor coactivator 7
mm10_v2_chr4_+_32657107_32657166	1.48569	CACAGUG	ENSMUST00000071642.4|Mdn1|ENSMUSG00000058006.6|midasin homolog (yeast) 	ENSMUST00000178134.1|Mdn1|ENSMUSG00000058006.6|midasin homolog (yeast)
mm10_v2_chr4_-_3938354_3938401	1.47709	CACAGUG	ENSMUST00000003369.3|Plag1|ENSMUSG00000003282.3|pleiomorphic adenoma gene 1
mm10_v2_chr14_-_65262391_65262490	1.47645	CACAGUG	ENSMUST00000131309.1|Fzd3|ENSMUSG00000007989.6|frizzled homolog 3 (Drosophila)
mm10_v2_chr10_-_84533884_84533896	1.4711	CACAGUG	ENSMUST00000053871.3|Ckap4|ENSMUSG00000046841.4|cytoskeleton-associated protein 4
mm10_v2_chr5_-_73256555_73256636	1.46917	CACAGUG	ENSMUST00000171179.1|Fryl|ENSMUSG00000090491.1|furry homolog-like (Drosophila) 	ENSMUST00000101127.5|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr12_-_101028983_101029042	1.43669	CACAGUG	ENSMUST00000068411.3|Ccdc88c|ENSMUSG00000021182.8|coiled-coil domain containing 88C 	ENSMUST00000085096.3|Ccdc88c|ENSMUSG00000021182.8|coiled-coil domain containing 88C
mm10_v2_chr10_+_13090788_13090843	1.43472	CACAGUG	ENSMUST00000121646.1|Plagl1|ENSMUSG00000019817.12|pleiomorphic adenoma gene-like 1 	ENSMUST00000121325.1|Plagl1|ENSMUSG00000019817.12|pleiomorphic adenoma gene-like 1 	ENSMUST00000121766.1|Plagl1|ENSMUSG00000019817.12|pleiomorphic adenoma gene-like 1
mm10_v2_chr9_+_110419750_110419809	1.41153	CACAGUG	ENSMUST00000035061.6|Ngp|ENSMUSG00000032484.6|neutrophilic granule protein
mm10_v2_chr19_-_34255325_34255342	1.4061	CACAGUG	ENSMUST00000039631.8|Acta2|ENSMUSG00000035783.8|actin, alpha 2, smooth muscle, aorta
mm10_v2_chr17_-_29888570_29888629	1.39101	CACAGUG	ENSMUST00000171691.1|Mdga1|ENSMUSG00000043557.9|MAM domain containing glycosylphosphatidylinositol anchor 1
mm10_v2_chr4_-_44167580_44167608	1.38864	CACAGUG	ENSMUST00000098098.2|Rnf38|ENSMUSG00000035696.9|ring finger protein 38
mm10_v2_chr16_-_92826004_92826080	1.38247	CACAGUG	ENSMUST00000023673.7|Runx1|ENSMUSG00000022952.10|runt related transcription factor 1
mm10_v2_chr12_-_50649190_50649281	1.37422	CACAGUG	ENSMUST00000002765.7|Prkd1|ENSMUSG00000002688.7|protein kinase D1
mm10_v2_chr13_-_52530827_52530841	1.3666	CACAGUG	ENSMUST00000057442.6|Diras2|ENSMUSG00000047842.6|DIRAS family, GTP-binding RAS-like 2
mm10_v2_chr14_-_70630149_70630185	1.36299	CACAGUG	ENSMUST00000022694.9|Dmtn|ENSMUSG00000022099.10|dematin actin binding protein
mm10_v2_chr3_-_127409044_127409064	1.35592	CACAGUG	ENSMUST00000182704.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr6_+_141249161_141249269	1.34745	CACAGUG	ENSMUST00000043259.7|Pde3a|ENSMUSG00000041741.8|phosphodiesterase 3A, cGMP inhibited
mm10_v2_chr17_-_81649607_81649607	1.3169	CACAGUG	ENSMUST00000163680.2|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000086538.3|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000163123.1|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1
mm10_v2_chr5_-_114690974_114690999	1.31092	CACAGUG	ENSMUST00000012028.7|Gltp|ENSMUSG00000011884.7|glycolipid transfer protein
mm10_v2_chr11_+_62248977_62249011	1.25392	CACAGUG	ENSMUST00000018644.2|Adora2b|ENSMUSG00000018500.2|adenosine A2b receptor
mm10_v2_chr8_-_9771018_9771018	1.24666	CACAGUG	ENSMUST00000110969.3|Fam155a|ENSMUSG00000079157.3|family with sequence similarity 155, member A
mm10_v2_chr18_-_52529847_52529890	1.24147	CACAGUG	ENSMUST00000171470.1|Lox|ENSMUSG00000024529.7|lysyl oxidase
mm10_v2_chr7_-_131410495_131410521	1.22911	CACAGUG	ENSMUST00000121033.1|Ikzf5|ENSMUSG00000040167.9|IKAROS family zinc finger 5 	ENSMUST00000046306.8|Ikzf5|ENSMUSG00000040167.9|IKAROS family zinc finger 5
mm10_v2_chr18_+_43207679_43207700	1.2185	CACAGUG	ENSMUST00000045477.4|Stk32a|ENSMUSG00000039954.8|serine/threonine kinase 32A
mm10_v2_chr3_+_101377074_101377158	1.21328	CACAGUG	ENSMUST00000043983.5|Igsf3|ENSMUSG00000042035.6|immunoglobulin superfamily, member 3
mm10_v2_chr4_-_136835843_136835988	1.19927	CACAGUG	ENSMUST00000105846.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000059287.7|Ephb2|ENSMUSG00000028664.8|Eph receptor B2 	ENSMUST00000105845.2|Ephb2|ENSMUSG00000028664.8|Eph receptor B2
mm10_v2_chr17_+_8801742_8801751	1.18057	CACAGUG	ENSMUST00000089085.2|Pde10a|ENSMUSG00000023868.9|phosphodiesterase 10A
mm10_v2_chr3_-_153725062_153725179	1.17424	CACAGUG	ENSMUST00000064460.5|St6galnac3|ENSMUSG00000052544.5|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
mm10_v2_chr6_-_37299950_37299981	1.16524	CACAGUG	ENSMUST00000101532.3|Dgki|ENSMUSG00000038665.9|diacylglycerol kinase, iota
mm10_v2_chr9_+_70678950_70679010	1.1486	CACAGUG	ENSMUST00000067880.6|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr17_-_45549655_45549677	1.14034	CACAGUG	ENSMUST00000180252.1|Tmem151b|ENSMUSG00000096847.1|transmembrane protein 151B
mm10_v2_chr5_-_37717122_37717178	1.12889	CACAGUG	ENSMUST00000094836.4|Stk32b|ENSMUSG00000029123.7|serine/threonine kinase 32B
mm10_v2_chr15_-_64060439_64060478	1.12585	CACAGUG	ENSMUST00000063838.4|Fam49b|ENSMUSG00000022378.7|family with sequence similarity 49, member B
mm10_v2_chr8_+_109868586_109868611	1.12124	CACAGUG	ENSMUST00000179721.1|Phlpp2|ENSMUSG00000031732.6|PH domain and leucine rich repeat protein phosphatase 2 	ENSMUST00000034175.4|Phlpp2|ENSMUSG00000031732.6|PH domain and leucine rich repeat protein phosphatase 2
mm10_v2_chr5_+_101765120_101765145	1.11412	CACAGUG	ENSMUST00000031273.8|Cds1|ENSMUSG00000029330.8|CDP-diacylglycerol synthase 1
mm10_v2_chr3_+_116594959_116595031	1.08648	CACAGUG	ENSMUST00000029571.8|Sass6|ENSMUSG00000027959.9|spindle assembly 6 homolog (C. elegans)
mm10_v2_chr8_-_31918203_31918368	1.05233	CACAGUG	ENSMUST00000073884.4|Nrg1|ENSMUSG00000062991.6|neuregulin 1
mm10_v2_chr17_-_47833169_47833254	1.04472	CACAGUG	ENSMUST00000131971.1|Mdfi|ENSMUSG00000032717.8|MyoD family inhibitor 	ENSMUST00000129360.1|Mdfi|ENSMUSG00000032717.8|MyoD family inhibitor 	ENSMUST00000113280.1|Mdfi|ENSMUSG00000032717.8|MyoD family inhibitor 	ENSMUST00000132125.1|Mdfi|ENSMUSG00000032717.8|MyoD family inhibitor
mm10_v2_chr13_-_37050237_37050274	1.03417	CACAGUG	ENSMUST00000164727.1|F13a1|ENSMUSG00000039109.9|coagulation factor XIII, A1 subunit
mm10_v2_chr10_-_71159676_71159708	1.02081	CACAGUG	ENSMUST00000014473.5|Bicc1|ENSMUSG00000014329.8|bicaudal C homolog 1 (Drosophila) 	ENSMUST00000143791.1|Bicc1|ENSMUSG00000014329.8|bicaudal C homolog 1 (Drosophila)
mm10_v2_chr7_+_100227311_100227394	1.01322	CACAGUG	ENSMUST00000084935.3|Pgm2l1|ENSMUSG00000030729.10|phosphoglucomutase 2-like 1
mm10_v2_chr18_-_54990124_54990180	1.00217	CACAGUG	ENSMUST00000064763.5|Zfp608|ENSMUSG00000052713.8|zinc finger protein 608
mm10_v2_chr11_-_96977660_96977711	0.976505	CACAGUG	ENSMUST00000107626.1|Sp2|ENSMUSG00000018678.6|Sp2 transcription factor 	ENSMUST00000107624.1|Sp2|ENSMUSG00000018678.6|Sp2 transcription factor
mm10_v2_chr17_+_28801090_28801145	0.970002	CACAGUG	ENSMUST00000004985.9|Brpf3|ENSMUSG00000063952.9|bromodomain and PHD finger containing, 3
mm10_v2_chr8_-_102785093_102785114	0.955765	CACAGUG	ENSMUST00000075190.3|Cdh11|ENSMUSG00000031673.5|cadherin 11
mm10_v2_chr5_-_22344690_22344710	0.944776	CACAGUG	ENSMUST00000062372.7|Reln|ENSMUSG00000042453.8|reelin 	ENSMUST00000161356.1|Reln|ENSMUSG00000042453.8|reelin
mm10_v2_chr7_+_135537814_135537830	0.937513	CACAGUG	ENSMUST00000073961.6|Ptpre|ENSMUSG00000041836.9|protein tyrosine phosphatase, receptor type, E
mm10_v2_chr17_+_75005523_75005568	0.92589	CACAGUG	ENSMUST00000001927.5|Ltbp1|ENSMUSG00000001870.9|latent transforming growth factor beta binding protein 1
mm10_v2_chr2_-_66124994_66125143	0.914718	CACAGUG	ENSMUST00000028378.3|Galnt3|ENSMUSG00000026994.3|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3
mm10_v2_chr18_+_10325148_10325222	0.907512	CACAGUG	ENSMUST00000048977.8|Greb1l|ENSMUSG00000042942.9|growth regulation by estrogen in breast cancer-like
mm10_v2_chr4_-_46138398_46138475	0.903723	CACAGUG	ENSMUST00000144495.1|Tstd2|ENSMUSG00000035495.9|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 	ENSMUST00000107770.1|Tstd2|ENSMUSG00000035495.9|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 	ENSMUST00000156021.1|Tstd2|ENSMUSG00000035495.9|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 	ENSMUST00000107772.1|Tstd2|ENSMUSG00000035495.9|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
mm10_v2_chr17_-_87797994_87798049	0.896709	CACAGUG	ENSMUST00000055221.7|Kcnk12|ENSMUSG00000050138.7|potassium channel, subfamily K, member 12
mm10_v2_chr1_-_161876656_161876682	0.895949	CACAGUG	ENSMUST00000048377.5|Suco|ENSMUSG00000040297.7|SUN domain containing ossification factor
mm10_v2_chr1_-_172027269_172027313	0.877691	CACAGUG	ENSMUST00000027837.6|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila) 	ENSMUST00000111264.1|Vangl2|ENSMUSG00000026556.9|vang-like 2 (van gogh, Drosophila)
mm10_v2_chr3_-_125938537_125938605	0.877029	CACAGUG	ENSMUST00000057944.7|Ugt8a|ENSMUSG00000032854.8|UDP galactosyltransferase 8A
mm10_v2_chr3_-_87174657_87174747	0.869269	CACAGUG	ENSMUST00000159976.1|Kirrel|ENSMUSG00000041734.9|kin of IRRE like (Drosophila) 	ENSMUST00000107618.2|Kirrel|ENSMUSG00000041734.9|kin of IRRE like (Drosophila)
mm10_v2_chr13_+_104178797_104178872	0.866698	CACAGUG	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chr10_-_23349887_23349919	0.85984	CACAGUG	ENSMUST00000074366.6|Eya4|ENSMUSG00000010461.8|eyes absent 4 homolog (Drosophila) 	ENSMUST00000092665.4|Eya4|ENSMUSG00000010461.8|eyes absent 4 homolog (Drosophila)
mm10_v2_chr13_-_103764502_103764505	0.858606	CACAGUG	ENSMUST00000074616.5|Srek1|ENSMUSG00000032621.7|splicing regulatory glutamine/lysine-rich protein 1
mm10_v2_chr6_-_53820764_53820837	0.854829	CACAGUG	ENSMUST00000127748.2|Tril|ENSMUSG00000043496.5|TLR4 interactor with leucine-rich repeats
mm10_v2_chr5_+_76588663_76588742	0.85192	CACAGUG	ENSMUST00000121979.1|Cep135|ENSMUSG00000036403.9|centrosomal protein 135
mm10_v2_chr12_-_27342696_27342726	0.847439	CACAGUG	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr1_+_64532790_64532815	0.844061	CACAGUG	ENSMUST00000049932.5|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000087366.4|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000171164.1|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1
mm10_v2_chr19_+_53529100_53529109	0.840865	CACAGUG	ENSMUST00000038287.6|Dusp5|ENSMUSG00000034765.6|dual specificity phosphatase 5
mm10_v2_chr11_+_46055973_46056068	0.839248	CACAGUG	ENSMUST00000011400.7|Adam19|ENSMUSG00000011256.10|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm10_v2_chr6_-_39206782_39206831	0.833654	CACAGUG	ENSMUST00000002305.8|Jhdm1d|ENSMUSG00000042599.8|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm10_v2_chr9_+_108991902_108991969	0.817271	CACAGUG	ENSMUST00000147989.1|Pfkfb4|ENSMUSG00000025648.11|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 	ENSMUST00000051873.8|Pfkfb4|ENSMUSG00000025648.11|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
mm10_v2_chr2_-_140671462_140671476	0.816015	CACAGUG	ENSMUST00000110057.2|Flrt3|ENSMUSG00000051379.6|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr12_-_46818749_46818788	0.81135	CACAGUG	ENSMUST00000021438.6|Nova1|ENSMUSG00000021047.6|neuro-oncological ventral antigen 1
mm10_v2_chr4_+_62965560_62965617	0.810537	CACAGUG	ENSMUST00000030043.6|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000107415.1|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000064814.5|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618
mm10_v2_chr5_-_124862368_124862424	0.801958	CACAGUG	ENSMUST00000036206.7|Ccdc92|ENSMUSG00000037979.7|coiled-coil domain containing 92
mm10_v2_chr5_-_25498702_25498745	0.800778	CACAGUG	ENSMUST00000173073.1|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C 	ENSMUST00000045291.7|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C
mm10_v2_chr7_-_83884289_83884341	0.782173	CACAGUG	ENSMUST00000094216.3|Mesdc1|ENSMUSG00000070462.3|mesoderm development candidate 1
mm10_v2_chr3_+_51415986_51416044	0.777511	CACAGUG	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr1_-_69685937_69685966	0.759745	CACAGUG	ENSMUST00000027146.2|Ikzf2|ENSMUSG00000025997.7|IKAROS family zinc finger 2
mm10_v2_chr3_+_109340627_109340653	0.751426	CACAGUG	ENSMUST00000046864.7|Vav3|ENSMUSG00000033721.10|vav 3 oncogene
mm10_v2_chr10_-_14544972_14545036	0.745184	CACAGUG	ENSMUST00000041168.4|Gpr126|ENSMUSG00000039116.4|G protein-coupled receptor 126
mm10_v2_chr14_-_54641347_54641374	0.739218	CACAGUG	ENSMUST00000067784.6|Cdh24|ENSMUSG00000059674.6|cadherin-like 24
mm10_v2_chr7_+_110122299_110122350	0.718053	CACAGUG	ENSMUST00000033326.8|Wee1|ENSMUSG00000031016.8|WEE 1 homolog 1 (S. pombe)
mm10_v2_chrX_-_7188713_7188743	0.715922	CACAGUG	ENSMUST00000004428.7|Clcn5|ENSMUSG00000004317.8|chloride channel 5
mm10_v2_chr2_-_153241402_153241426	0.708228	CACAGUG	ENSMUST00000056924.7|Plagl2|ENSMUSG00000051413.11|pleiomorphic adenoma gene-like 2
mm10_v2_chr17_+_34039437_34039481	0.699859	CACAGUG	ENSMUST00000131134.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000087497.4|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000114255.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2 	ENSMUST00000114252.1|Col11a2|ENSMUSG00000024330.10|collagen, type XI, alpha 2
mm10_v2_chr6_-_52204415_52204587	0.698913	CACAGUG	ENSMUST00000048794.6|Hoxa5|ENSMUSG00000038253.6|homeobox A5
mm10_v2_chr2_+_14604252_14604306	0.697906	CACAGUG	ENSMUST00000114723.2|Cacnb2|ENSMUSG00000057914.9|calcium channel, voltage-dependent, beta 2 subunit
mm10_v2_chr8_+_41239718_41239767	0.69762	CACAGUG	ENSMUST00000045218.7|Pcm1|ENSMUSG00000031592.9|pericentriolar material 1
mm10_v2_chr12_-_118301429_118301458	0.696795	CACAGUG	ENSMUST00000026367.9|Sp4|ENSMUSG00000025323.9|trans-acting transcription factor 4
mm10_v2_chr2_-_33431324_33431324	0.691582	CACAGUG	ENSMUST00000113158.1|Zbtb34|ENSMUSG00000068966.4|zinc finger and BTB domain containing 34
mm10_v2_chr3_-_50443603_50443615	0.687903	CACAGUG	ENSMUST00000029297.4|Slc7a11|ENSMUSG00000027737.5|solute carrier family 7 (cationic amino acid transporter, y+ system), member 11
mm10_v2_chr4_+_59189240_59189257	0.687152	CACAGUG	ENSMUST00000030074.7|Ugcg|ENSMUSG00000028381.8|UDP-glucose ceramide glucosyltransferase
mm10_v2_chr1_+_191821444_191821489	0.681132	CACAGUG	ENSMUST00000027931.7|Nek2|ENSMUSG00000026622.9|NIMA (never in mitosis gene a)-related expressed kinase 2
mm10_v2_chr2_-_60125651_60125775	0.678258	CACAGUG	ENSMUST00000112550.1|Baz2b|ENSMUSG00000026987.10|bromodomain adjacent to zinc finger domain, 2B
mm10_v2_chr15_+_81936753_81936839	0.671518	CACAGUG	ENSMUST00000038757.7|Csdc2|ENSMUSG00000042109.7|cold shock domain containing C2, RNA binding
mm10_v2_chr14_-_121379206_121379334	0.661605	CACAGUG	ENSMUST00000079817.7|Stk24|ENSMUSG00000063410.7|serine/threonine kinase 24
mm10_v2_chr9_-_112187766_112187862	0.659993	CACAGUG	ENSMUST00000111872.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000164754.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr15_+_12824815_12824833	0.651158	CACAGUG	ENSMUST00000169061.1|Drosha|ENSMUSG00000022191.9|drosha, ribonuclease type III
mm10_v2_chr2_+_106693185_106693278	0.638705	CACAGUG	ENSMUST00000111063.1|Mpped2|ENSMUSG00000016386.9|metallophosphoesterase domain containing 2
mm10_v2_chr17_-_24936969_24937002	0.637791	CACAGUG	ENSMUST00000178969.1|Mapk8ip3|ENSMUSG00000024163.11|mitogen-activated protein kinase 8 interacting protein 3 	ENSMUST00000115229.3|Mapk8ip3|ENSMUSG00000024163.11|mitogen-activated protein kinase 8 interacting protein 3
mm10_v2_chr14_-_69284982_69285112	0.637532	CACAGUG	ENSMUST00000183882.1|Slc25a37|ENSMUSG00000034248.7|solute carrier family 25, member 37 	ENSMUST00000037064.4|Slc25a37|ENSMUSG00000034248.7|solute carrier family 25, member 37
mm10_v2_chr9_-_107289847_107289877	0.633067	CACAGUG	ENSMUST00000035194.2|Mapkapk3|ENSMUSG00000032577.10|mitogen-activated protein kinase-activated protein kinase 3
mm10_v2_chr10_-_62880014_62880014	0.632937	CACAGUG	ENSMUST00000050826.7|Tet1|ENSMUSG00000047146.9|tet methylcytosine dioxygenase 1
mm10_v2_chr6_-_28261907_28261943	0.63009	CACAGUG	ENSMUST00000115320.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000123098.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000115321.2|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000155494.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800
mm10_v2_chrX_+_96096034_96096056	0.629552	CACAGUG	ENSMUST00000117399.1|Msn|ENSMUSG00000031207.10|moesin
mm10_v2_chr15_-_98607611_98607638	0.625506	CACAGUG	ENSMUST00000096224.4|Adcy6|ENSMUSG00000022994.8|adenylate cyclase 6
mm10_v2_chr1_-_23922283_23922366	0.622844	CACAGUG	ENSMUST00000027339.7|Smap1|ENSMUSG00000026155.7|small ArfGAP 1
mm10_v2_chr5_-_24030649_24030707	0.619316	CACAGUG	ENSMUST00000030849.6|Fam126a|ENSMUSG00000028995.8|family with sequence similarity 126, member A
mm10_v2_chr3_+_28263205_28263215	0.618007	CACAGUG	ENSMUST00000159236.2|Tnik|ENSMUSG00000027692.10|TRAF2 and NCK interacting kinase
mm10_v2_chr10_+_80755196_80755239	0.616271	CACAGUG	ENSMUST00000105336.2|Dot1l|ENSMUSG00000061589.8|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
mm10_v2_chr3_-_9610074_9610086	0.61371	CACAGUG	ENSMUST00000041124.7|Zfp704|ENSMUSG00000040209.7|zinc finger protein 704
mm10_v2_chr5_-_135394499_135394558	0.613625	CACAGUG	ENSMUST00000065638.4|Pom121|ENSMUSG00000053293.5|nuclear pore membrane protein 121 	ENSMUST00000111171.2|Pom121|ENSMUSG00000053293.5|nuclear pore membrane protein 121
mm10_v2_chr13_+_20090538_20090633	0.607874	CACAGUG	ENSMUST00000072519.5|Elmo1|ENSMUSG00000041112.9|engulfment and cell motility 1
mm10_v2_chr15_-_103239812_103239888	0.607718	CACAGUG	ENSMUST00000118152.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr7_+_45434833_45434871	0.607477	CACAGUG	ENSMUST00000003964.8|Gys1|ENSMUSG00000003865.8|glycogen synthase 1, muscle
mm10_v2_chr5_+_16553488_16553550	0.607173	CACAGUG	ENSMUST00000030683.3|Hgf|ENSMUSG00000028864.3|hepatocyte growth factor
mm10_v2_chr3_+_105452326_105452365	0.603416	CACAGUG	ENSMUST00000098761.3|Kcnd3|ENSMUSG00000040896.10|potassium voltage-gated channel, Shal-related family, member 3
mm10_v2_chr4_+_119814495_119814526	0.595236	CACAGUG	ENSMUST00000106307.2|Hivep3|ENSMUSG00000028634.10|human immunodeficiency virus type I enhancer binding protein 3
mm10_v2_chr18_+_86394952_86394968	0.593663	CACAGUG	ENSMUST00000058829.2|Neto1|ENSMUSG00000050321.2|neuropilin (NRP) and tolloid (TLL)-like 1
mm10_v2_chr2_+_125673077_125673133	0.590268	CACAGUG	ENSMUST00000164756.2|Eid1|ENSMUSG00000091337.2|EP300 interacting inhibitor of differentiation 1
mm10_v2_chr4_+_43957401_43957496	0.589692	CACAGUG	ENSMUST00000030202.7|Glipr2|ENSMUSG00000028480.8|GLI pathogenesis-related 2
mm10_v2_chr6_-_38876163_38876234	0.588358	CACAGUG	ENSMUST00000161779.1|Hipk2|ENSMUSG00000061436.9|homeodomain interacting protein kinase 2
mm10_v2_chr6_-_120038647_120038699	0.586151	CACAGUG	ENSMUST00000088646.5|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000177761.1|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000088644.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000060043.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1
mm10_v2_chr11_-_116027961_116027978	0.583976	CACAGUG	ENSMUST00000106454.1|H3f3b|ENSMUSG00000016559.8|H3 histone, family 3B
mm10_v2_chr4_+_127169131_127169230	0.580311	CACAGUG	ENSMUST00000046659.7|Dlgap3|ENSMUSG00000042388.8|discs, large (Drosophila) homolog-associated protein 3
mm10_v2_chr1_-_143776973_143777068	0.579848	CACAGUG	ENSMUST00000159879.1|Trove2|ENSMUSG00000018199.8|TROVE domain family, member 2
mm10_v2_chr5_+_96997676_96997766	0.578742	CACAGUG	ENSMUST00000112974.1|Bmp2k|ENSMUSG00000034663.7|BMP2 inducible kinase 	ENSMUST00000035635.7|Bmp2k|ENSMUSG00000034663.7|BMP2 inducible kinase
mm10_v2_chr5_-_113908685_113908758	0.577335	CACAGUG	ENSMUST00000004646.6|Coro1c|ENSMUSG00000004530.6|coronin, actin binding protein 1C
mm10_v2_chr7_+_92875253_92875284	0.574132	CACAGUG	ENSMUST00000076052.6|Prcp|ENSMUSG00000061119.6|prolylcarboxypeptidase (angiotensinase C)
mm10_v2_chr6_-_72958465_72958496	0.573307	CACAGUG	ENSMUST00000114050.1|Tmsb10|ENSMUSG00000079523.2|thymosin, beta 10
mm10_v2_chr8_+_83608175_83608198	0.571589	CACAGUG	ENSMUST00000005620.8|Dnajb1|ENSMUSG00000005483.9|DnaJ (Hsp40) homolog, subfamily B, member 1
mm10_v2_chr5_-_20951769_20951824	0.570642	CACAGUG	ENSMUST00000036489.5|Rsbn1l|ENSMUSG00000039968.5|round spermatid basic protein 1-like
mm10_v2_chr4_+_109407087_109407119	0.570229	CACAGUG	ENSMUST00000064129.7|Ttc39a|ENSMUSG00000028555.9|tetratricopeptide repeat domain 39A 	ENSMUST00000106619.1|Ttc39a|ENSMUSG00000028555.9|tetratricopeptide repeat domain 39A
mm10_v2_chr17_+_29549783_29549798	0.5688	CACAGUG	ENSMUST00000048677.7|Tbc1d22b|ENSMUSG00000042203.7|TBC1 domain family, member 22B
mm10_v2_chr6_-_52226165_52226196	0.565878	CACAGUG	ENSMUST00000114425.2|Hoxa9|ENSMUSG00000038227.9|homeobox A9
mm10_v2_chr8_-_91313223_91313279	0.565793	CACAGUG	ENSMUST00000047783.7|Rpgrip1l|ENSMUSG00000033282.7|Rpgrip1-like
mm10_v2_chr10_-_40302186_40302206	0.564199	CACAGUG	ENSMUST00000099945.4|Amd1|ENSMUSG00000075232.4|S-adenosylmethionine decarboxylase 1
mm10_v2_chr12_+_108410542_108410585	0.554658	CACAGUG	ENSMUST00000054955.7|Eml1|ENSMUSG00000058070.8|echinoderm microtubule associated protein like 1
mm10_v2_chr11_-_79146407_79146422	0.551845	CACAGUG	ENSMUST00000018478.4|Ksr1|ENSMUSG00000018334.10|kinase suppressor of ras 1 	ENSMUST00000108264.1|Ksr1|ENSMUSG00000018334.10|kinase suppressor of ras 1
mm10_v2_chr4_+_127021311_127021339	0.551685	CACAGUG	ENSMUST00000030623.7|Sfpq|ENSMUSG00000028820.7|splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
mm10_v2_chrX_+_138914422_138914438	0.549435	CACAGUG	ENSMUST00000064937.7|Nrk|ENSMUSG00000052854.9|Nik related kinase 	ENSMUST00000113052.1|Nrk|ENSMUSG00000052854.9|Nik related kinase
mm10_v2_chr11_+_31872100_31872226	0.548702	CACAGUG	ENSMUST00000020543.6|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4 	ENSMUST00000109412.2|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4
mm10_v2_chr2_+_85136355_85136371	0.541331	CACAGUG	ENSMUST00000057019.7|Aplnr|ENSMUSG00000044338.8|apelin receptor
mm10_v2_chr19_-_32388462_32388512	0.540409	CACAGUG	ENSMUST00000099514.3|Sgms1|ENSMUSG00000040451.11|sphingomyelin synthase 1
mm10_v2_chr12_-_69892989_69893103	0.535179	CACAGUG	ENSMUST00000110567.1|Map4k5|ENSMUSG00000034761.9|mitogen-activated protein kinase kinase kinase kinase 5 	ENSMUST00000171211.1|Map4k5|ENSMUSG00000034761.9|mitogen-activated protein kinase kinase kinase kinase 5
mm10_v2_chr11_+_20543307_20543336	0.531067	CACAGUG	ENSMUST00000093292.4|Sertad2|ENSMUSG00000049800.7|SERTA domain containing 2
mm10_v2_chr8_+_110721462_110721486	0.529094	CACAGUG	ENSMUST00000052457.8|Mtss1l|ENSMUSG00000033763.8|metastasis suppressor 1-like
mm10_v2_chr5_+_3543812_3543853	0.528371	CACAGUG	ENSMUST00000115527.3|Fam133b|ENSMUSG00000058503.7|family with sequence similarity 133, member B
mm10_v2_chr2_+_69722797_69722840	0.513666	CACAGUG	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr5_+_35893319_35893426	0.511403	CACAGUG	ENSMUST00000064571.4|Afap1|ENSMUSG00000029094.5|actin filament associated protein 1
mm10_v2_chr4_-_154636831_154636873	0.51014	CACAGUG	ENSMUST00000030902.6|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105637.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000070313.7|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105636.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000105638.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000097759.2|Prdm16|ENSMUSG00000039410.10|PR domain containing 16 	ENSMUST00000124771.1|Prdm16|ENSMUSG00000039410.10|PR domain containing 16
mm10_v2_chr9_+_66713686_66713716	0.508642	CACAGUG	ENSMUST00000071889.6|Car12|ENSMUSG00000032373.8|carbonic anyhydrase 12
mm10_v2_chr16_-_20426375_20426394	0.502407	CACAGUG	ENSMUST00000079158.6|Abcc5|ENSMUSG00000022822.9|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm10_v2_chr10_-_116473875_116473929	0.499595	CACAGUG	ENSMUST00000068233.4|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm10_v2_chrX_+_71555918_71556022	0.499039	CACAGUG	ENSMUST00000072699.6|Hmgb3|ENSMUSG00000015217.5|high mobility group box 3 	ENSMUST00000114582.2|Hmgb3|ENSMUSG00000015217.5|high mobility group box 3 	ENSMUST00000015361.4|Hmgb3|ENSMUSG00000015217.5|high mobility group box 3 	ENSMUST00000088874.3|Hmgb3|ENSMUSG00000015217.5|high mobility group box 3
mm10_v2_chr15_+_103009479_103009507	0.495334	CACAGUG	ENSMUST00000001711.4|Hoxc6|ENSMUSG00000001661.4|homeobox C6
mm10_v2_chr4_+_33310306_33310387	0.493149	CACAGUG	ENSMUST00000108153.2|Rngtt|ENSMUSG00000028274.11|RNA guanylyltransferase and 5'-phosphatase 	ENSMUST00000029942.7|Rngtt|ENSMUSG00000028274.11|RNA guanylyltransferase and 5'-phosphatase
mm10_v2_chr5_-_22550279_22550386	0.490723	CACAGUG	ENSMUST00000030872.5|Orc5|ENSMUSG00000029012.5|origin recognition complex, subunit 5
mm10_v2_chr1_-_97661950_97662074	0.488602	CACAGUG	ENSMUST00000053033.7|D1Ertd622e|ENSMUSG00000044768.10|DNA segment, Chr 1, ERATO Doi 622, expressed 	ENSMUST00000149927.1|D1Ertd622e|ENSMUSG00000044768.10|DNA segment, Chr 1, ERATO Doi 622, expressed
mm10_v2_chr5_+_110879788_110879842	0.482605	CACAGUG	ENSMUST00000156290.2|Ttc28|ENSMUSG00000033209.11|tetratricopeptide repeat domain 28 	ENSMUST00000040111.9|Ttc28|ENSMUSG00000033209.11|tetratricopeptide repeat domain 28
mm10_v2_chr6_-_118197732_118197744	0.481637	CACAGUG	ENSMUST00000032201.5|Ret|ENSMUSG00000030110.7|ret proto-oncogene 	ENSMUST00000088790.3|Ret|ENSMUSG00000030110.7|ret proto-oncogene
mm10_v2_chr4_+_63215402_63215435	0.479877	CACAGUG	ENSMUST00000036300.6|Col27a1|ENSMUSG00000045672.9|collagen, type XXVII, alpha 1
mm10_v2_chr12_-_100725028_100725081	0.479012	CACAGUG	ENSMUST00000043599.6|Rps6ka5|ENSMUSG00000021180.8|ribosomal protein S6 kinase, polypeptide 5
mm10_v2_chr5_-_74068361_74068438	0.474034	CACAGUG	ENSMUST00000119154.1|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46 	ENSMUST00000068058.7|Usp46|ENSMUSG00000054814.8|ubiquitin specific peptidase 46
mm10_v2_chr10_-_117845935_117845949	0.472628	CACAGUG	ENSMUST00000064667.7|Rap1b|ENSMUSG00000052681.7|RAS related protein 1b
mm10_v2_chr5_+_98854434_98854466	0.468352	CACAGUG	ENSMUST00000031278.4|Bmp3|ENSMUSG00000029335.4|bone morphogenetic protein 3
mm10_v2_chr10_+_80179482_80179531	0.467923	CACAGUG	ENSMUST00000003154.6|Efna2|ENSMUSG00000003070.6|ephrin A2
mm10_v2_chr10_-_128891674_128891718	0.465322	CACAGUG	ENSMUST00000026408.6|Gdf11|ENSMUSG00000025352.6|growth differentiation factor 11
mm10_v2_chr7_-_47008397_47008421	0.460733	CACAGUG	ENSMUST00000061639.7|Spty2d1|ENSMUSG00000049516.7|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
mm10_v2_chrX_+_41401304_41401427	0.457014	CACAGUG	ENSMUST00000076349.5|Gria3|ENSMUSG00000001986.10|glutamate receptor, ionotropic, AMPA3 (alpha 3)
mm10_v2_chr8_+_4238733_4238767	0.453138	CACAGUG	ENSMUST00000110998.2|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7 	ENSMUST00000062686.4|Map2k7|ENSMUSG00000002948.12|mitogen-activated protein kinase kinase 7
mm10_v2_chr8_-_57653023_57653039	0.451212	CACAGUG	ENSMUST00000034021.5|Galnt7|ENSMUSG00000031608.7|UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
mm10_v2_chr17_+_72918298_72918316	0.45039	CACAGUG	ENSMUST00000024857.6|Lbh|ENSMUSG00000024063.6|limb-bud and heart
mm10_v2_chr4_+_48585135_48585187	0.449392	CACAGUG	ENSMUST00000030032.6|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr12_-_3426700_3426782	0.445455	CACAGUG	ENSMUST00000180149.1|1110002L01Rik|ENSMUSG00000071456.2|RIKEN cDNA 1110002L01 gene
mm10_v2_chr1_+_134709293_134709318	0.440091	CACAGUG	ENSMUST00000121990.1|Syt2|ENSMUSG00000026452.9|synaptotagmin II
mm10_v2_chr11_-_79254663_79254685	0.438012	CACAGUG	ENSMUST00000017821.5|Wsb1|ENSMUSG00000017677.5|WD repeat and SOCS box-containing 1
mm10_v2_chr4_-_55532453_55532485	0.437607	CACAGUG	ENSMUST00000132746.1|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut) 	ENSMUST00000107619.2|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut)
mm10_v2_chr11_-_49712674_49712726	0.436447	CACAGUG	ENSMUST00000020624.6|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6 	ENSMUST00000145353.1|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6
mm10_v2_chr5_-_134688568_134688590	0.435846	CACAGUG	ENSMUST00000015137.3|Limk1|ENSMUSG00000029674.7|LIM-domain containing, protein kinase
mm10_v2_chr9_-_96631487_96631617	0.434581	CACAGUG	ENSMUST00000128346.1|Rasa2|ENSMUSG00000032413.6|RAS p21 protein activator 2 	ENSMUST00000034984.6|Rasa2|ENSMUSG00000032413.6|RAS p21 protein activator 2
mm10_v2_chr18_+_44380479_44380554	0.430211	CACAGUG	ENSMUST00000025350.8|Dcp2|ENSMUSG00000024472.8|DCP2 decapping enzyme homolog (S. cerevisiae)
mm10_v2_chr2_-_154892887_154892935	0.42986	CACAGUG	ENSMUST00000099173.4|Eif2s2|ENSMUSG00000074656.6|eukaryotic translation initiation factor 2, subunit 2 (beta)
mm10_v2_chr11_+_97415527_97415538	0.426457	CACAGUG	ENSMUST00000121799.1|Arhgap23|ENSMUSG00000049807.10|Rho GTPase activating protein 23
mm10_v2_chr8_-_60983215_60983319	0.425476	CACAGUG	ENSMUST00000004430.7|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000110301.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000093490.2|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr8_-_80880479_80880499	0.423912	CACAGUG	ENSMUST00000034150.8|Gab1|ENSMUSG00000031714.8|growth factor receptor bound protein 2-associated protein 1
mm10_v2_chr9_-_104262900_104262949	0.422455	CACAGUG	ENSMUST00000035170.6|Dnajc13|ENSMUSG00000032560.7|DnaJ (Hsp40) homolog, subfamily C, member 13
mm10_v2_chr7_-_29505447_29505473	0.420315	CACAGUG	ENSMUST00000183096.1|Sipa1l3|ENSMUSG00000030583.10|signal-induced proliferation-associated 1 like 3 	ENSMUST00000085809.4|Sipa1l3|ENSMUSG00000030583.10|signal-induced proliferation-associated 1 like 3
mm10_v2_chr16_+_33684460_33684472	0.412502	CACAGUG	ENSMUST00000152782.1|Heg1|ENSMUSG00000075254.5|HEG homolog 1 (zebrafish) 	ENSMUST00000179453.1|Heg1|ENSMUSG00000075254.5|HEG homolog 1 (zebrafish)
mm10_v2_chr13_+_75707484_75707510	0.411214	CACAGUG	ENSMUST00000001583.6|Ell2|ENSMUSG00000001542.6|elongation factor RNA polymerase II 2
mm10_v2_chr13_-_55571118_55571123	0.40872	CACAGUG	ENSMUST00000021957.6|Fam193b|ENSMUSG00000021495.8|family with sequence similarity 193, member B
mm10_v2_chr1_-_63114516_63114667	0.407944	CACAGUG	ENSMUST00000097718.2|Ino80d|ENSMUSG00000040865.9|INO80 complex subunit D
mm10_v2_chr3_+_132085281_132085299	0.407574	CACAGUG	ENSMUST00000029665.5|Dkk2|ENSMUSG00000028031.5|dickkopf homolog 2 (Xenopus laevis)
mm10_v2_chr9_+_57940104_57940120	0.405856	CACAGUG	ENSMUST00000043059.7|Sema7a|ENSMUSG00000038264.7|sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
mm10_v2_chr11_+_78188422_78188447	0.405521	CACAGUG	ENSMUST00000002128.7|Rab34|ENSMUSG00000002059.11|RAB34, member of RAS oncogene family 	ENSMUST00000150941.1|Rab34|ENSMUSG00000002059.11|RAB34, member of RAS oncogene family
mm10_v2_chr7_-_45052865_45052914	0.404724	CACAGUG	ENSMUST00000057293.6|Prr12|ENSMUSG00000046574.7|proline rich 12
mm10_v2_chr5_-_67847400_67847439	0.402872	CACAGUG	ENSMUST00000113652.1|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENSMUST00000113651.1|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENSMUST00000037380.8|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm10_v2_chr13_+_111686178_111686210	0.401125	CACAGUG	ENSMUST00000109272.2|Mier3|ENSMUSG00000032727.7|mesoderm induction early response 1, family member 3
mm10_v2_chr11_+_93886157_93886219	0.400353	CACAGUG	ENSMUST00000063718.4|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1 	ENSMUST00000107854.2|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1
mm10_v2_chr8_-_8660773_8660773	0.400184	CACAGUG	ENSMUST00000001319.7|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr11_+_11686213_11686282	0.398267	CACAGUG	ENSMUST00000076700.4|Ikzf1|ENSMUSG00000018654.11|IKAROS family zinc finger 1 	ENSMUST00000048122.6|Ikzf1|ENSMUSG00000018654.11|IKAROS family zinc finger 1
mm10_v2_chr17_-_42876417_42876431	0.396621	CACAGUG	ENSMUST00000024709.7|Cd2ap|ENSMUSG00000061665.6|CD2-associated protein
mm10_v2_chr13_-_113618549_113618565	0.395999	CACAGUG	ENSMUST00000109241.3|Snx18|ENSMUSG00000042364.10|sorting nexin 18
mm10_v2_chr5_-_135545108_135545128	0.394051	CACAGUG	ENSMUST00000060311.8|Hip1|ENSMUSG00000039959.9|huntingtin interacting protein 1
mm10_v2_chr10_+_60346851_60347012	0.391631	CACAGUG	ENSMUST00000020301.7|4632428N05Rik|ENSMUSG00000020101.8|RIKEN cDNA 4632428N05 gene 	ENSMUST00000105460.1|4632428N05Rik|ENSMUSG00000020101.8|RIKEN cDNA 4632428N05 gene 	ENSMUST00000170507.1|4632428N05Rik|ENSMUSG00000020101.8|RIKEN cDNA 4632428N05 gene
mm10_v2_chr6_-_100287441_100287465	0.389147	CACAGUG	ENSMUST00000101118.2|Rybp|ENSMUSG00000072872.2|RING1 and YY1 binding protein
mm10_v2_chr6_-_52234902_52234960	0.388968	CACAGUG	ENSMUST00000125581.1|Hoxa10|ENSMUSG00000000938.11|homeobox A10
mm10_v2_chr14_-_105896819_105896819	0.388813	CACAGUG	ENSMUST00000022709.4|Spry2|ENSMUSG00000022114.4|sprouty homolog 2 (Drosophila)
mm10_v2_chr2_+_31572701_31572725	0.388356	CACAGUG	ENSMUST00000055244.6|Fubp3|ENSMUSG00000026843.9|far upstream element (FUSE) binding protein 3
mm10_v2_chr7_-_118243564_118243641	0.38431	CACAGUG	ENSMUST00000179047.1|Smg1|ENSMUSG00000030655.8|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) 	ENSMUST00000032891.8|Smg1|ENSMUSG00000030655.8|SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
mm10_v2_chr5_-_67427794_67427813	0.381907	CACAGUG	ENSMUST00000169190.1|Bend4|ENSMUSG00000092060.1|BEN domain containing 4
mm10_v2_chr2_+_4400958_4400975	0.38109	CACAGUG	ENSMUST00000075767.7|Frmd4a|ENSMUSG00000026657.10|FERM domain containing 4A
mm10_v2_chr1_+_172499948_172500047	0.380607	CACAGUG	ENSMUST00000111230.1|Tagln2|ENSMUSG00000026547.9|transgelin 2
mm10_v2_chr9_+_108460518_108460571	0.379012	CACAGUG	ENSMUST00000061209.5|Ccdc71|ENSMUSG00000049305.5|coiled-coil domain containing 71
mm10_v2_chr8_-_77724426_77724483	0.378649	CACAGUG	ENSMUST00000034029.7|Ednra|ENSMUSG00000031616.7|endothelin receptor type A
mm10_v2_chr12_+_55199533_55199533	0.378271	CACAGUG	ENSMUST00000177978.1|1700047I17Rik2|ENSMUSG00000094103.1|RIKEN cDNA 1700047I17 gene 2
mm10_v2_chr2_-_85196697_85196708	0.373981	CACAGUG	ENSMUST00000099930.2|Lrrc55|ENSMUSG00000075224.2|leucine rich repeat containing 55 	ENSMUST00000111601.1|Lrrc55|ENSMUSG00000075224.2|leucine rich repeat containing 55
mm10_v2_chr8_-_122699066_122699119	0.372563	CACAGUG	ENSMUST00000127984.1|Cbfa2t3|ENSMUSG00000006362.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
mm10_v2_chr12_-_110696332_110696418	0.371255	CACAGUG	ENSMUST00000094361.4|Hsp90aa1|ENSMUSG00000021270.7|heat shock protein 90, alpha (cytosolic), class A member 1
mm10_v2_chr11_-_86357570_86357614	0.36891	CACAGUG	ENSMUST00000043624.8|Med13|ENSMUSG00000034297.8|mediator complex subunit 13
mm10_v2_chr11_+_79993062_79993122	0.368055	CACAGUG	ENSMUST00000017692.8|Suz12|ENSMUSG00000017548.9|suppressor of zeste 12 homolog (Drosophila) 	ENSMUST00000163272.1|Suz12|ENSMUSG00000017548.9|suppressor of zeste 12 homolog (Drosophila)
mm10_v2_chr3_+_59006978_59006978	0.363565	CACAGUG	ENSMUST00000040325.7|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000164225.1|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000040846.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000029393.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like
mm10_v2_chr2_+_149830788_149830807	0.360637	CACAGUG	ENSMUST00000109935.1|Syndig1|ENSMUSG00000074736.4|synapse differentiation inducing 1
mm10_v2_chr7_+_91090697_91090727	0.359897	CACAGUG	ENSMUST00000107196.2|Dlg2|ENSMUSG00000052572.9|discs, large homolog 2 (Drosophila)
mm10_v2_chr10_-_37138863_37138937	0.353892	CACAGUG	ENSMUST00000092584.5|Marcks|ENSMUSG00000069662.5|myristoylated alanine rich protein kinase C substrate
mm10_v2_chr17_+_84511832_84511913	0.348563	CACAGUG	ENSMUST00000047206.5|Plekhh2|ENSMUSG00000040852.5|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
mm10_v2_chr6_+_36388055_36388084	0.347051	CACAGUG	ENSMUST00000172278.1|Chrm2|ENSMUSG00000045613.3|cholinergic receptor, muscarinic 2, cardiac
mm10_v2_chr5_+_118560719_118560719	0.346492	CACAGUG	ENSMUST00000100816.4|Med13l|ENSMUSG00000018076.9|mediator complex subunit 13-like
mm10_v2_chr15_+_12205009_12205040	0.342616	CACAGUG	ENSMUST00000038172.8|Mtmr12|ENSMUSG00000039458.8|myotubularin related protein 12
mm10_v2_chr4_+_150281573_150281646	0.342395	CACAGUG	ENSMUST00000105682.2|Rere|ENSMUSG00000039852.10|arginine glutamic acid dipeptide (RE) repeats
mm10_v2_chr16_-_4523056_4523075	0.33923	CACAGUG	ENSMUST00000090500.3|Srl|ENSMUSG00000022519.7|sarcalumenin 	ENSMUST00000023161.7|Srl|ENSMUSG00000022519.7|sarcalumenin
mm10_v2_chr5_-_107289561_107289637	0.338414	CACAGUG	ENSMUST00000031224.8|Tgfbr3|ENSMUSG00000029287.8|transforming growth factor, beta receptor III
mm10_v2_chr15_-_8444449_8444506	0.335547	CACAGUG	ENSMUST00000052965.6|Nipbl|ENSMUSG00000022141.6|Nipped-B homolog (Drosophila)
mm10_v2_chr16_+_17451981_17452034	0.335336	CACAGUG	ENSMUST00000006293.3|Crkl|ENSMUSG00000006134.3|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
mm10_v2_chr13_-_68999518_68999565	0.334125	CACAGUG	ENSMUST00000022013.7|Adcy2|ENSMUSG00000021536.7|adenylate cyclase 2
mm10_v2_chr7_-_84086494_84086509	0.321949	CACAGUG	ENSMUST00000064174.5|9930013L23Rik|ENSMUSG00000052353.7|RIKEN cDNA 9930013L23 gene
mm10_v2_chr6_+_95117740_95117880	0.321432	CACAGUG	ENSMUST00000032107.7|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8 	ENSMUST00000119582.1|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8
mm10_v2_chr12_+_81631369_81631394	0.319652	CACAGUG	ENSMUST00000036116.5|Ttc9|ENSMUSG00000042734.5|tetratricopeptide repeat domain 9
mm10_v2_chr8_-_70120816_70120873	0.318149	CACAGUG	ENSMUST00000002412.8|Ncan|ENSMUSG00000002341.8|neurocan
mm10_v2_chr11_+_57011798_57011827	0.316502	CACAGUG	ENSMUST00000036315.9|Gria1|ENSMUSG00000020524.10|glutamate receptor, ionotropic, AMPA1 (alpha 1)
mm10_v2_chr5_-_124095749_124095820	0.314552	CACAGUG	ENSMUST00000031354.4|Abcb9|ENSMUSG00000029408.7|ATP-binding cassette, sub-family B (MDR/TAP), member 9
mm10_v2_chr6_-_24956106_24956131	0.312093	CACAGUG	ENSMUST00000127247.2|Tmem229a|ENSMUSG00000048022.10|transmembrane protein 229A
mm10_v2_chr4_+_21848039_21848077	0.309436	CACAGUG	ENSMUST00000098238.2|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18 	ENSMUST00000108229.1|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18
mm10_v2_chr12_+_83632208_83632325	0.303933	CACAGUG	ENSMUST00000048155.9|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182618.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000183154.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182036.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182347.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25
mm10_v2_chr12_+_53248677_53248677	0.298964	CACAGUG	ENSMUST00000101432.2|Npas3|ENSMUSG00000021010.7|neuronal PAS domain protein 3
mm10_v2_chr9_+_70012540_70012595	0.296885	CACAGUG	ENSMUST00000118198.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000119905.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000119413.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000140305.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2 	ENSMUST00000122087.1|Gtf2a2|ENSMUSG00000033543.11|general transcription factor II A, 2
mm10_v2_chr2_+_10372426_10372497	0.295837	CACAGUG	ENSMUST00000114864.2|Sfmbt2|ENSMUSG00000061186.9|Scm-like with four mbt domains 2 	ENSMUST00000116594.2|Sfmbt2|ENSMUSG00000061186.9|Scm-like with four mbt domains 2 	ENSMUST00000041105.6|Sfmbt2|ENSMUSG00000061186.9|Scm-like with four mbt domains 2
mm10_v2_chr4_-_111902754_111902918	0.294894	CACAGUG	ENSMUST00000102719.1|Slc5a9|ENSMUSG00000028544.8|solute carrier family 5 (sodium/glucose cotransporter), member 9 	ENSMUST00000102721.1|Slc5a9|ENSMUSG00000028544.8|solute carrier family 5 (sodium/glucose cotransporter), member 9
mm10_v2_chr15_-_96460838_96460856	0.294499	CACAGUG	ENSMUST00000047835.6|Scaf11|ENSMUSG00000033228.7|SR-related CTD-associated factor 11
mm10_v2_chr5_+_64803513_64803530	0.293865	CACAGUG	ENSMUST00000165536.1|Klf3|ENSMUSG00000029178.8|Kruppel-like factor 3 (basic)
mm10_v2_chr15_+_96287518_96287604	0.292808	CACAGUG	ENSMUST00000134985.2|Arid2|ENSMUSG00000033237.12|AT rich interactive domain 2 (ARID, RFX-like) 	ENSMUST00000096250.4|Arid2|ENSMUSG00000033237.12|AT rich interactive domain 2 (ARID, RFX-like)
mm10_v2_chr15_+_6708372_6708396	0.292467	CACAGUG	ENSMUST00000061656.6|Rictor|ENSMUSG00000050310.8|RPTOR independent companion of MTOR, complex 2
mm10_v2_chr1_-_120271074_120271085	0.285625	CACAGUG	ENSMUST00000112641.1|Steap3|ENSMUSG00000026389.10|STEAP family member 3
mm10_v2_chr1_-_4880669_4880699	0.284381	CACAGUG	ENSMUST00000078030.3|Gm6104|ENSMUSG00000062588.3|predicted gene 6104
mm10_v2_chr3_+_103914560_103914605	0.283394	CACAGUG	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr2_-_125123618_125123661	0.282135	CACAGUG	ENSMUST00000142718.1|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor 	ENSMUST00000152367.1|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor 	ENSMUST00000067780.3|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor 	ENSMUST00000147105.1|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor
mm10_v2_chr18_-_34007206_34007361	0.274569	CACAGUG	ENSMUST00000025234.5|Epb4.1l4a|ENSMUSG00000024376.6|erythrocyte protein band 4.1-like 4a
mm10_v2_chr5_+_75152274_75152297	0.27122	CACAGUG	ENSMUST00000000476.8|Pdgfra|ENSMUSG00000029231.9|platelet derived growth factor receptor, alpha polypeptide
mm10_v2_chr12_+_55124528_55124528	0.268391	CACAGUG	ENSMUST00000177768.1|Fam177a|ENSMUSG00000095595.1|family with sequence similarity 177, member A
mm10_v2_chr4_+_42916647_42916712	0.268013	CACAGUG	ENSMUST00000132173.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178 	ENSMUST00000107975.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178
mm10_v2_chr2_-_39190687_39190746	0.26703	CACAGUG	ENSMUST00000142872.1|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion 	ENSMUST00000038874.5|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion
mm10_v2_chr19_+_53310495_53310552	0.265203	CACAGUG	ENSMUST00000003870.7|Mxi1|ENSMUSG00000025025.7|Max interacting protein 1
mm10_v2_chr7_-_116038734_116038750	0.264441	CACAGUG	ENSMUST00000166877.1|Sox6|ENSMUSG00000051910.7|SRY-box containing gene 6
mm10_v2_chr5_+_150673739_150673827	0.264183	CACAGUG	ENSMUST00000016569.4|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) 	ENSMUST00000038900.8|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
mm10_v2_chr13_-_89742490_89742515	0.261815	CACAGUG	ENSMUST00000109546.2|Vcan|ENSMUSG00000021614.10|versican
mm10_v2_chr2_+_124610573_124610613	0.261586	CACAGUG	ENSMUST00000103239.3|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 	ENSMUST00000103240.2|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm10_v2_chr1_+_194938821_194938968	0.256933	CACAGUG	ENSMUST00000016638.2|Cd34|ENSMUSG00000016494.3|CD34 antigen 	ENSMUST00000110815.2|Cd34|ENSMUSG00000016494.3|CD34 antigen
mm10_v2_chr2_-_179976646_179976665	0.255394	CACAGUG	ENSMUST00000041618.7|Taf4a|ENSMUSG00000039117.10|TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr6_+_119479668_119479795	0.254837	CACAGUG	ENSMUST00000032094.5|Fbxl14|ENSMUSG00000030019.5|F-box and leucine-rich repeat protein 14
mm10_v2_chr4_+_33924632_33924651	0.253638	CACAGUG	ENSMUST00000057188.6|Cnr1|ENSMUSG00000044288.6|cannabinoid receptor 1 (brain)
mm10_v2_chr10_-_80671976_80671976	0.251235	CACAGUG	ENSMUST00000003433.6|Mknk2|ENSMUSG00000020190.9|MAP kinase-interacting serine/threonine kinase 2
mm10_v2_chr14_+_60378242_60378292	0.249562	CACAGUG	ENSMUST00000022561.6|Amer2|ENSMUSG00000021986.7|APC membrane recruitment 2
mm10_v2_chr9_+_64385675_64385698	0.24859	CACAGUG	ENSMUST00000068967.4|Megf11|ENSMUSG00000036466.11|multiple EGF-like-domains 11
mm10_v2_chr1_+_151571373_151571471	0.242307	CACAGUG	ENSMUST00000148810.1|Fam129a|ENSMUSG00000026483.7|family with sequence similarity 129, member A
mm10_v2_chr15_+_95790831_95790859	0.240808	CACAGUG	ENSMUST00000071874.6|Ano6|ENSMUSG00000064210.6|anoctamin 6
mm10_v2_chr5_+_122158265_122158356	0.239892	CACAGUG	ENSMUST00000102528.4|Ppp1cc|ENSMUSG00000004455.10|protein phosphatase 1, catalytic subunit, gamma isoform 	ENSMUST00000086294.6|Ppp1cc|ENSMUSG00000004455.10|protein phosphatase 1, catalytic subunit, gamma isoform
mm10_v2_chr3_+_145938004_145938063	0.239181	CACAGUG	ENSMUST00000039571.7|2410004B18Rik|ENSMUSG00000036873.7|RIKEN cDNA 2410004B18 gene
mm10_v2_chr2_-_18037737_18037737	0.238053	CACAGUG	ENSMUST00000066163.2|A930004D18Rik|ENSMUSG00000054057.2|RIKEN cDNA A930004D18 gene
mm10_v2_chr7_-_46710642_46710687	0.236843	CACAGUG	ENSMUST00000143082.1|Saal1|ENSMUSG00000006763.6|serum amyloid A-like 1
mm10_v2_chr3_+_37639945_37639964	0.235675	CACAGUG	ENSMUST00000108109.1|Spry1|ENSMUSG00000037211.6|sprouty homolog 1 (Drosophila) 	ENSMUST00000038569.1|Spry1|ENSMUSG00000037211.6|sprouty homolog 1 (Drosophila)
mm10_v2_chr2_-_120970706_120970761	0.23396	CACAGUG	ENSMUST00000028728.5|Ubr1|ENSMUSG00000027272.5|ubiquitin protein ligase E3 component n-recognin 1
mm10_v2_chr5_+_115631902_115631933	0.232422	CACAGUG	ENSMUST00000031492.8|Rab35|ENSMUSG00000029518.9|RAB35, member RAS oncogene family
mm10_v2_chr15_-_64312636_64312692	0.231018	CACAGUG	ENSMUST00000177083.1|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1 	ENSMUST00000177371.1|Asap1|ENSMUSG00000022377.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm10_v2_chr5_-_36695969_36696041	0.230305	CACAGUG	ENSMUST00000031091.9|D5Ertd579e|ENSMUSG00000029190.13|DNA segment, Chr 5, ERATO Doi 579, expressed 	ENSMUST00000140063.1|D5Ertd579e|ENSMUSG00000029190.13|DNA segment, Chr 5, ERATO Doi 579, expressed
mm10_v2_chr7_-_126792469_126792478	0.230195	CACAGUG	ENSMUST00000032936.6|Ppp4c|ENSMUSG00000030697.6|protein phosphatase 4, catalytic subunit
mm10_v2_chr8_-_36249292_36249516	0.229418	CACAGUG	ENSMUST00000065297.5|Lonrf1|ENSMUSG00000039633.6|LON peptidase N-terminal domain and ring finger 1
mm10_v2_chr3_+_152210458_152210534	0.226801	CACAGUG	ENSMUST00000166984.1|Fubp1|ENSMUSG00000028034.9|far upstream element (FUSE) binding protein 1 	ENSMUST00000106121.1|Fubp1|ENSMUSG00000028034.9|far upstream element (FUSE) binding protein 1
mm10_v2_chr16_+_44139821_44139900	0.223182	CACAGUG	ENSMUST00000159514.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000161326.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063520.8|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063542.7|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm10_v2_chr7_+_109010825_109010930	0.223129	CACAGUG	ENSMUST00000033341.5|Tub|ENSMUSG00000031028.7|tubby candidate gene
mm10_v2_chr10_+_110745433_110745572	0.220639	CACAGUG	ENSMUST00000174857.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000073781.5|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000173471.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000173634.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7
mm10_v2_chr17_+_15499888_15499960	0.219656	CACAGUG	ENSMUST00000159197.1|Tbp|ENSMUSG00000014767.10|TATA box binding protein 	ENSMUST00000162505.1|Tbp|ENSMUSG00000014767.10|TATA box binding protein 	ENSMUST00000014911.5|Tbp|ENSMUSG00000014767.10|TATA box binding protein 	ENSMUST00000147081.2|Tbp|ENSMUSG00000014767.10|TATA box binding protein 	ENSMUST00000118001.1|Tbp|ENSMUSG00000014767.10|TATA box binding protein 	ENSMUST00000143924.1|Tbp|ENSMUSG00000014767.10|TATA box binding protein 	ENSMUST00000119879.2|Tbp|ENSMUSG00000014767.10|TATA box binding protein 	ENSMUST00000155051.1|Tbp|ENSMUSG00000014767.10|TATA box binding protein 	ENSMUST00000117593.1|Tbp|ENSMUSG00000014767.10|TATA box binding protein
mm10_v2_chr3_-_119783262_119783388	0.21934	CACAGUG	ENSMUST00000029780.7|Ptbp2|ENSMUSG00000028134.7|polypyrimidine tract binding protein 2
mm10_v2_chr4_+_12089373_12089441	0.218773	CACAGUG	ENSMUST00000095143.2|Rbm12b2|ENSMUSG00000052137.5|RNA binding motif protein 12 B2 	ENSMUST00000063839.5|Rbm12b2|ENSMUSG00000052137.5|RNA binding motif protein 12 B2
mm10_v2_chr8_-_69996326_69996379	0.2152	CACAGUG	ENSMUST00000177851.1|Gatad2a|ENSMUSG00000036180.8|GATA zinc finger domain containing 2A 	ENSMUST00000065169.4|Gatad2a|ENSMUSG00000036180.8|GATA zinc finger domain containing 2A
mm10_v2_chr13_+_55209776_55209788	0.214162	CACAGUG	ENSMUST00000099490.2|Nsd1|ENSMUSG00000021488.7|nuclear receptor-binding SET-domain protein 1
mm10_v2_chr19_+_59458372_59458450	0.212982	CACAGUG	ENSMUST00000062216.3|Emx2|ENSMUSG00000043969.4|empty spiracles homeobox 2
mm10_v2_chr19_-_37207293_37207508	0.212727	CACAGUG	ENSMUST00000132580.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000079754.4|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000136286.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126188.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3 	ENSMUST00000126781.1|Cpeb3|ENSMUSG00000039652.10|cytoplasmic polyadenylation element binding protein 3
mm10_v2_chr11_-_88718223_88718294	0.211818	CACAGUG	ENSMUST00000107909.1|Msi2|ENSMUSG00000069769.7|musashi RNA-binding protein 2
mm10_v2_chr2_-_34755229_34755252	0.211362	CACAGUG	ENSMUST00000102800.1|Gapvd1|ENSMUSG00000026867.12|GTPase activating protein and VPS9 domains 1
mm10_v2_chr11_+_88047693_88047727	0.208127	CACAGUG	ENSMUST00000079866.4|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr3_+_152395991_152396059	0.20805	CACAGUG	ENSMUST00000106100.2|Zzz3|ENSMUSG00000039068.10|zinc finger, ZZ domain containing 3
mm10_v2_chr6_+_4903298_4903346	0.207528	CACAGUG	ENSMUST00000035813.2|Ppp1r9a|ENSMUSG00000032827.9|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm10_v2_chr8_-_47352348_47352367	0.205271	CACAGUG	ENSMUST00000110367.2|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chr12_+_4592992_4593087	0.205177	CACAGUG	ENSMUST00000062580.7|Itsn2|ENSMUSG00000020640.9|intersectin 2
mm10_v2_chr8_-_116732991_116733076	0.204486	CACAGUG	ENSMUST00000109102.2|Cdyl2|ENSMUSG00000031758.9|chromodomain protein, Y chromosome-like 2
mm10_v2_chr19_+_28835074_28835116	0.20197	CACAGUG	ENSMUST00000025875.4|Slc1a1|ENSMUSG00000024935.4|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
mm10_v2_chr14_-_101609033_101609191	0.198199	CACAGUG	ENSMUST00000161991.1|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4 	ENSMUST00000100340.3|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4
mm10_v2_chr11_+_29373618_29373777	0.197207	CACAGUG	ENSMUST00000040182.6|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A 	ENSMUST00000109477.1|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A
mm10_v2_chr10_-_83534130_83534141	0.197073	CACAGUG	ENSMUST00000020497.7|Aldh1l2|ENSMUSG00000020256.8|aldehyde dehydrogenase 1 family, member L2
mm10_v2_chr12_+_70453095_70453107	0.189142	CACAGUG	ENSMUST00000021471.6|Tmx1|ENSMUSG00000021072.6|thioredoxin-related transmembrane protein 1
mm10_v2_chrX_+_56374550_56374617	0.187021	CACAGUG	ENSMUST00000068106.3|6330419J24Rik|ENSMUSG00000054850.3|RIKEN cDNA 6330419J24 gene
mm10_v2_chr11_-_84525514_84525542	0.186383	CACAGUG	ENSMUST00000018842.7|Lhx1|ENSMUSG00000018698.9|LIM homeobox protein 1
mm10_v2_chr6_+_38433913_38433965	0.185312	CACAGUG	ENSMUST00000160583.1|Ubn2|ENSMUSG00000038538.11|ubinuclein 2
mm10_v2_chr17_-_24141542_24141595	0.184849	CACAGUG	ENSMUST00000115411.1|Pdpk1|ENSMUSG00000024122.10|3-phosphoinositide dependent protein kinase 1 	ENSMUST00000115409.2|Pdpk1|ENSMUSG00000024122.10|3-phosphoinositide dependent protein kinase 1 	ENSMUST00000115407.2|Pdpk1|ENSMUSG00000024122.10|3-phosphoinositide dependent protein kinase 1 	ENSMUST00000102927.3|Pdpk1|ENSMUSG00000024122.10|3-phosphoinositide dependent protein kinase 1
mm10_v2_chr11_-_46166397_46166508	0.183951	CACAGUG	ENSMUST00000020679.2|Nipal4|ENSMUSG00000020411.2|NIPA-like domain containing 4
mm10_v2_chr2_+_49619277_49619343	0.183781	CACAGUG	ENSMUST00000028102.7|Kif5c|ENSMUSG00000026764.9|kinesin family member 5C
mm10_v2_chr16_-_4997782_4997852	0.183476	CACAGUG	ENSMUST00000170323.2|Sept12|ENSMUSG00000022542.6|septin 12
mm10_v2_chr4_+_149104130_149104189	0.182745	CACAGUG	ENSMUST00000103216.3|Dffa|ENSMUSG00000028974.7|DNA fragmentation factor, alpha subunit 	ENSMUST00000030816.3|Dffa|ENSMUSG00000028974.7|DNA fragmentation factor, alpha subunit
mm10_v2_chr1_+_127774164_127774238	0.182079	CACAGUG	ENSMUST00000027587.8|Ccnt2|ENSMUSG00000026349.8|cyclin T2 	ENSMUST00000112570.1|Ccnt2|ENSMUSG00000026349.8|cyclin T2
mm10_v2_chr3_+_63976106_63976135	0.177212	CACAGUG	ENSMUST00000029405.7|Gmps|ENSMUSG00000027823.8|guanine monophosphate synthetase
mm10_v2_chr3_+_89520152_89520175	0.175225	CACAGUG	ENSMUST00000000811.7|Kcnn3|ENSMUSG00000000794.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
mm10_v2_chr18_+_69345721_69345811	0.175085	CACAGUG	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr7_+_123123870_123123901	0.173692	CACAGUG	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr12_+_79029150_79029193	0.173686	CACAGUG	ENSMUST00000039928.5|Plekhh1|ENSMUSG00000060716.6|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
mm10_v2_chr15_+_103503261_103503298	0.172092	CACAGUG	ENSMUST00000023132.3|Pde1b|ENSMUSG00000022489.5|phosphodiesterase 1B, Ca2+-calmodulin dependent
mm10_v2_chr11_-_59290746_59290758	0.168175	CACAGUG	ENSMUST00000010044.7|Wnt3a|ENSMUSG00000009900.7|wingless-related MMTV integration site 3A
mm10_v2_chr5_-_110448486_110448519	0.167587	CACAGUG	ENSMUST00000069483.5|Fbrsl1|ENSMUSG00000043323.10|fibrosin-like 1
mm10_v2_chr1_+_89454769_89454885	0.167418	CACAGUG	ENSMUST00000027521.8|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 	ENSMUST00000074945.5|Agap1|ENSMUSG00000055013.8|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
mm10_v2_chr19_+_47579602_47579681	0.162842	CACAGUG	ENSMUST00000026043.5|Slk|ENSMUSG00000025060.8|STE20-like kinase
mm10_v2_chr4_+_123201503_123201529	0.162549	CACAGUG	ENSMUST00000068262.5|Nt5c1a|ENSMUSG00000054958.6|5'-nucleotidase, cytosolic IA
mm10_v2_chr9_-_31131817_31131853	0.159895	CACAGUG	ENSMUST00000034478.2|St14|ENSMUSG00000031995.2|suppression of tumorigenicity 14 (colon carcinoma)
mm10_v2_chr17_-_10319324_10319380	0.157584	CACAGUG	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr9_+_72662346_72662412	0.156408	CACAGUG	ENSMUST00000034740.8|Nedd4|ENSMUSG00000032216.8|neural precursor cell expressed, developmentally down-regulated 4
mm10_v2_chr1_+_153652943_153653025	0.149879	CACAGUG	ENSMUST00000041776.5|Rgs8|ENSMUSG00000042671.6|regulator of G-protein signaling 8
mm10_v2_chr10_-_110000219_110000219	0.146795	CACAGUG	ENSMUST00000032719.7|Nav3|ENSMUSG00000020181.9|neuron navigator 3
mm10_v2_chr16_+_58408443_58408523	0.146058	CACAGUG	ENSMUST00000046663.7|Dcbld2|ENSMUSG00000035107.7|discoidin, CUB and LCCL domain containing 2
mm10_v2_chr10_-_53750880_53750880	0.145336	CACAGUG	ENSMUST00000020003.7|Fam184a|ENSMUSG00000019856.7|family with sequence similarity 184, member A
mm10_v2_chrX_-_101222426_101222563	0.145238	CACAGUG	ENSMUST00000120389.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000156473.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000077876.3|Snx12|ENSMUSG00000046032.10|sorting nexin 12
mm10_v2_chr8_-_106893581_106893609	0.143784	CACAGUG	ENSMUST00000176437.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8 	ENSMUST00000177068.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8 	ENSMUST00000169312.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8 	ENSMUST00000176515.1|Chtf8|ENSMUSG00000046691.7|CTF8, chromosome transmission fidelity factor 8
mm10_v2_chr3_+_36863102_36863147	0.141999	CACAGUG	ENSMUST00000057272.8|4932438A13Rik|ENSMUSG00000037270.11|RIKEN cDNA 4932438A13 gene
mm10_v2_chr9_-_44881274_44881323	0.141026	CACAGUG	ENSMUST00000002095.3|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000114689.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000128768.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A
mm10_v2_chr16_-_32079270_32079368	0.140952	CACAGUG	ENSMUST00000023467.8|Pak2|ENSMUSG00000022781.8|p21 protein (Cdc42/Rac)-activated kinase 2
mm10_v2_chr18_-_6241486_6241550	0.139575	CACAGUG	ENSMUST00000025083.7|Kif5b|ENSMUSG00000006740.7|kinesin family member 5B
mm10_v2_chr1_-_191026181_191026197	0.13444	CACAGUG	ENSMUST00000085635.4|Mfsd7b|ENSMUSG00000066595.4|major facilitator superfamily domain containing 7B
mm10_v2_chr10_+_126978690_126978749	0.133682	CACAGUG	ENSMUST00000105256.2|Ctdsp2|ENSMUSG00000078429.2|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm10_v2_chr2_-_137116624_137116644	0.133168	CACAGUG	ENSMUST00000028735.7|Jag1|ENSMUSG00000027276.7|jagged 1
mm10_v2_chr2_+_30061754_30061859	0.132721	CACAGUG	ENSMUST00000149578.1|Set|ENSMUSG00000054766.7|SET nuclear oncogene 	ENSMUST00000102866.3|Set|ENSMUSG00000054766.7|SET nuclear oncogene
mm10_v2_chr11_+_69901816_69901894	0.130577	CACAGUG	ENSMUST00000177138.1|Neurl4|ENSMUSG00000047284.8|neuralized homolog 4 (Drosophila) 	ENSMUST00000108617.3|Neurl4|ENSMUSG00000047284.8|neuralized homolog 4 (Drosophila) 	ENSMUST00000177476.1|Neurl4|ENSMUSG00000047284.8|neuralized homolog 4 (Drosophila) 	ENSMUST00000061837.4|Neurl4|ENSMUSG00000047284.8|neuralized homolog 4 (Drosophila)
mm10_v2_chr1_+_151755339_151755393	0.130276	CACAGUG	ENSMUST00000059498.5|Edem3|ENSMUSG00000043019.6|ER degradation enhancer, mannosidase alpha-like 3
mm10_v2_chr12_-_86079019_86079041	0.129536	CACAGUG	ENSMUST00000003687.6|Tgfb3|ENSMUSG00000021253.6|transforming growth factor, beta 3
mm10_v2_chr13_+_14063776_14063822	0.126254	CACAGUG	ENSMUST00000129488.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110536.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110534.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000039538.8|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110533.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like)
mm10_v2_chr3_+_90341654_90341654	0.124813	CACAGUG	ENSMUST00000049382.4|Gatad2b|ENSMUSG00000042390.5|GATA zinc finger domain containing 2B
mm10_v2_chr12_-_91590009_91590056	0.124606	CACAGUG	ENSMUST00000021345.6|Gtf2a1|ENSMUSG00000020962.7|general transcription factor II A, 1
mm10_v2_chr11_-_65788275_65788318	0.12455	CACAGUG	ENSMUST00000152096.1|Map2k4|ENSMUSG00000033352.5|mitogen-activated protein kinase kinase 4 	ENSMUST00000046963.3|Map2k4|ENSMUSG00000033352.5|mitogen-activated protein kinase kinase 4
mm10_v2_chr5_+_144545883_144545889	0.123413	CACAGUG	ENSMUST00000071782.6|Nptx2|ENSMUSG00000059991.6|neuronal pentraxin 2
mm10_v2_chrX_+_52912232_52912361	0.123192	CACAGUG	ENSMUST00000078944.6|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000101587.3|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000154864.2|Phf6|ENSMUSG00000025626.10|PHD finger protein 6
mm10_v2_chr19_-_10457447_10457557	0.121795	CACAGUG	ENSMUST00000171400.2|Lrrc10b|ENSMUSG00000090291.2|leucine rich repeat containing 10B
mm10_v2_chr2_+_32727682_32727712	0.121632	CACAGUG	ENSMUST00000113242.2|Sh2d3c|ENSMUSG00000059013.6|SH2 domain containing 3C
mm10_v2_chr1_+_181352618_181352641	0.120381	CACAGUG	ENSMUST00000161880.1|Cnih3|ENSMUSG00000026514.7|cornichon homolog 3 (Drosophila) 	ENSMUST00000027795.7|Cnih3|ENSMUSG00000026514.7|cornichon homolog 3 (Drosophila)
mm10_v2_chr14_-_108914237_108914257	0.118843	CACAGUG	ENSMUST00000100322.2|Slitrk1|ENSMUSG00000075478.2|SLIT and NTRK-like family, member 1
mm10_v2_chr4_-_32923455_32923530	0.118299	CACAGUG	ENSMUST00000035719.4|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6 	ENSMUST00000084749.1|Ankrd6|ENSMUSG00000040183.7|ankyrin repeat domain 6
mm10_v2_chr1_+_156558844_156559049	0.115569	CACAGUG	ENSMUST00000166172.2|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene) 	ENSMUST00000027888.6|Abl2|ENSMUSG00000026596.7|v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
mm10_v2_chr12_+_108179738_108179831	0.113406	CACAGUG	ENSMUST00000101055.4|Ccnk|ENSMUSG00000021258.9|cyclin K
mm10_v2_chr11_-_47379405_47379522	0.112305	CACAGUG	ENSMUST00000077221.5|Sgcd|ENSMUSG00000020354.9|sarcoglycan, delta (dystrophin-associated glycoprotein)
mm10_v2_chr7_-_123500449_123500578	0.108561	CACAGUG	ENSMUST00000042470.7|Zkscan2|ENSMUSG00000030757.7|zinc finger with KRAB and SCAN domains 2 	ENSMUST00000128217.1|Zkscan2|ENSMUSG00000030757.7|zinc finger with KRAB and SCAN domains 2
mm10_v2_chrX_+_134404543_134404628	0.106804	CACAGUG	ENSMUST00000113228.1|Drp2|ENSMUSG00000000223.7|dystrophin related protein 2 	ENSMUST00000153424.1|Drp2|ENSMUSG00000000223.7|dystrophin related protein 2
mm10_v2_chr1_-_119837613_119837673	0.106182	CACAGUG	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr3_-_107518001_107518023	0.106147	CACAGUG	ENSMUST00000169449.1|Slc6a17|ENSMUSG00000027894.8|solute carrier family 6 (neurotransmitter transporter), member 17 	ENSMUST00000029499.8|Slc6a17|ENSMUSG00000027894.8|solute carrier family 6 (neurotransmitter transporter), member 17
mm10_v2_chr7_-_35754394_35754454	0.0999129	CACAGUG	ENSMUST00000051377.8|Dpy19l3|ENSMUSG00000043671.8|dpy-19-like 3 (C. elegans)
mm10_v2_chr12_+_4133047_4133126	0.0987498	CACAGUG	ENSMUST00000124505.1|Adcy3|ENSMUSG00000020654.9|adenylate cyclase 3
mm10_v2_chr1_+_60181495_60181591	0.0982162	CACAGUG	ENSMUST00000160834.1|Nbeal1|ENSMUSG00000073664.5|neurobeachin like 1
mm10_v2_chr15_-_102516806_102517064	0.0968865	CACAGUG	ENSMUST00000169162.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000023812.2|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000165174.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000169367.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12 	ENSMUST00000169377.1|Map3k12|ENSMUSG00000023050.2|mitogen-activated protein kinase kinase kinase 12
mm10_v2_chr1_+_70725715_70725830	0.0963965	CACAGUG	ENSMUST00000053922.5|Vwc2l|ENSMUSG00000045648.9|von Willebrand factor C domain-containing protein 2-like
mm10_v2_chr13_-_101768154_101768217	0.095857	CACAGUG	ENSMUST00000055518.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr12_+_56695628_56695700	0.0953934	CACAGUG	ENSMUST00000001538.9|Pax9|ENSMUSG00000001497.12|paired box gene 9
mm10_v2_chr4_-_126429501_126429556	0.090392	CACAGUG	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr1_-_184732616_184732627	0.0893435	CACAGUG	ENSMUST00000048572.6|Hlx|ENSMUSG00000039377.6|H2.0-like homeobox
mm10_v2_chr6_-_115994953_115995010	0.0885156	CACAGUG	ENSMUST00000015511.8|Plxnd1|ENSMUSG00000030123.9|plexin D1
mm10_v2_chr15_-_79687776_79687894	0.0884348	CACAGUG	ENSMUST00000023061.5|Josd1|ENSMUSG00000022426.5|Josephin domain containing 1
mm10_v2_chr6_+_87042838_87042918	0.0849984	CACAGUG	ENSMUST00000113658.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000113657.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000113655.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000032057.7|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1
mm10_v2_chr11_+_105589970_105590028	0.0835549	CACAGUG	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chr6_-_13677930_13677974	0.0831353	CACAGUG	ENSMUST00000045235.5|B630005N14Rik|ENSMUSG00000042742.5|RIKEN cDNA B630005N14 gene
mm10_v2_chr1_-_166002591_166002609	0.080022	CACAGUG	ENSMUST00000111429.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000176800.1|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr3_-_107760221_107760249	0.0798907	CACAGUG	ENSMUST00000153114.1|Csf1|ENSMUSG00000014599.4|colony stimulating factor 1 (macrophage) 	ENSMUST00000118593.1|Csf1|ENSMUSG00000014599.4|colony stimulating factor 1 (macrophage) 	ENSMUST00000120243.1|Csf1|ENSMUSG00000014599.4|colony stimulating factor 1 (macrophage)
mm10_v2_chr9_-_73968901_73968999	0.0796181	CACAGUG	ENSMUST00000184666.1|Unc13c|ENSMUSG00000062151.7|unc-13 homolog C (C. elegans)
mm10_v2_chr4_+_54947976_54948054	0.0782185	CACAGUG	ENSMUST00000098070.3|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chr11_-_113684155_113684186	0.077303	CACAGUG	ENSMUST00000120194.1|Fam104a|ENSMUSG00000041629.7|family with sequence similarity 104, member A
mm10_v2_chrX_-_108834303_108834381	0.0763789	CACAGUG	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chr10_-_105574435_105574451	0.0749941	CACAGUG	ENSMUST00000061506.8|Tmtc2|ENSMUSG00000036019.8|transmembrane and tetratricopeptide repeat containing 2
mm10_v2_chr4_+_155734800_155734874	0.0739335	CACAGUG	ENSMUST00000147721.1|Tmem240|ENSMUSG00000084845.3|transmembrane protein 240 	ENSMUST00000127188.2|Tmem240|ENSMUSG00000084845.3|transmembrane protein 240
mm10_v2_chr4_+_65124174_65124174	0.0731776	CACAGUG	ENSMUST00000084501.3|Pappa|ENSMUSG00000028370.7|pregnancy-associated plasma protein A
mm10_v2_chr7_+_133637543_133637559	0.0724891	CACAGUG	ENSMUST00000051169.6|2700050L05Rik|ENSMUSG00000039990.9|RIKEN cDNA 2700050L05 gene
mm10_v2_chr2_+_48814109_48814173	0.0720307	CACAGUG	ENSMUST00000063886.3|Acvr2a|ENSMUSG00000052155.5|activin receptor IIA
mm10_v2_chr4_+_15265798_15265831	0.0710722	CACAGUG	ENSMUST00000062684.8|Tmem64|ENSMUSG00000043252.8|transmembrane protein 64
mm10_v2_chr18_-_82692734_82692933	0.0699506	CACAGUG	ENSMUST00000182122.1|Zfp236|ENSMUSG00000041258.10|zinc finger protein 236 	ENSMUST00000171071.2|Zfp236|ENSMUSG00000041258.10|zinc finger protein 236
mm10_v2_chr2_-_167492826_167492891	0.0699008	CACAGUG	ENSMUST00000109211.2|Spata2|ENSMUSG00000047030.9|spermatogenesis associated 2 	ENSMUST00000057627.9|Spata2|ENSMUSG00000047030.9|spermatogenesis associated 2
mm10_v2_chr17_+_29660595_29660706	0.0683574	CACAGUG	ENSMUST00000024816.6|Cmtr1|ENSMUSG00000024019.11|cap methyltransferase 1
mm10_v2_chr19_+_41482632_41482688	0.0667051	CACAGUG	ENSMUST00000067795.5|Lcor|ENSMUSG00000025019.9|ligand dependent nuclear receptor corepressor
mm10_v2_chr8_-_25201349_25201459	0.0663424	CACAGUG	ENSMUST00000084512.4|Tacc1|ENSMUSG00000065954.4|transforming, acidic coiled-coil containing protein 1 	ENSMUST00000084030.4|Tacc1|ENSMUSG00000065954.4|transforming, acidic coiled-coil containing protein 1
mm10_v2_chr2_-_68472138_68472268	0.0660656	CACAGUG	ENSMUST00000102715.3|Stk39|ENSMUSG00000027030.9|serine/threonine kinase 39
mm10_v2_chr18_-_47368830_47368878	0.0652841	CACAGUG	ENSMUST00000019791.7|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000115449.2|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr15_-_103366763_103366798	0.0652283	CACAGUG	ENSMUST00000023128.6|Itga5|ENSMUSG00000000555.6|integrin alpha 5 (fibronectin receptor alpha)
mm10_v2_chr3_-_51560816_51560878	0.0632338	CACAGUG	ENSMUST00000037141.7|Setd7|ENSMUSG00000037111.8|SET domain containing (lysine methyltransferase) 7
mm10_v2_chr11_-_75169519_75169519	0.061797	CACAGUG	ENSMUST00000055619.4|Hic1|ENSMUSG00000043099.4|hypermethylated in cancer 1
mm10_v2_chr15_-_93595877_93595909	0.0612828	CACAGUG	ENSMUST00000048982.4|Prickle1|ENSMUSG00000036158.6|prickle homolog 1 (Drosophila)
mm10_v2_chr19_+_45149833_45149878	0.0603172	CACAGUG	ENSMUST00000026236.9|Tlx1|ENSMUSG00000025215.9|T cell leukemia, homeobox 1
mm10_v2_chr7_-_104353328_104353394	0.059795	CACAGUG	ENSMUST00000130139.1|Trim12c|ENSMUSG00000057143.8|tripartite motif-containing 12C 	ENSMUST00000059037.8|Trim12c|ENSMUSG00000057143.8|tripartite motif-containing 12C
mm10_v2_chr3_-_104864420_104864505	0.0558754	CACAGUG	ENSMUST00000094028.5|Capza1|ENSMUSG00000070372.7|capping protein (actin filament) muscle Z-line, alpha 1
mm10_v2_chr2_-_162661075_162661147	0.0515874	CACAGUG	ENSMUST00000109442.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109445.2|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109443.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T 	ENSMUST00000109441.1|Ptprt|ENSMUSG00000053141.10|protein tyrosine phosphatase, receptor type, T
mm10_v2_chr13_-_34345174_34345273	0.0515261	CACAGUG	ENSMUST00000040336.5|Slc22a23|ENSMUSG00000038267.8|solute carrier family 22, member 23
mm10_v2_chr3_+_96557950_96557968	0.0501333	CACAGUG	ENSMUST00000074519.6|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein 	ENSMUST00000049093.7|Txnip|ENSMUSG00000038393.8|thioredoxin interacting protein
mm10_v2_chr1_+_85793411_85793541	0.0498923	CACAGUG	ENSMUST00000113360.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39 	ENSMUST00000126962.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39
mm10_v2_chr9_+_44604844_44604921	0.0487846	CACAGUG	ENSMUST00000170489.1|Ddx6|ENSMUSG00000032097.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm10_v2_chr12_+_16810940_16810978	0.048549	CACAGUG	ENSMUST00000020908.7|E2f6|ENSMUSG00000057469.7|E2F transcription factor 6
mm10_v2_chr2_+_156196642_156196775	0.0477184	CACAGUG	ENSMUST00000037401.8|Phf20|ENSMUSG00000038116.10|PHD finger protein 20
mm10_v2_chr12_-_26415256_26415303	0.0461252	CACAGUG	ENSMUST00000020971.6|Rnf144a|ENSMUSG00000020642.6|ring finger protein 144A 	ENSMUST00000062149.4|Rnf144a|ENSMUSG00000020642.6|ring finger protein 144A
mm10_v2_chr1_-_9700209_9700329	0.0461129	CACAGUG	ENSMUST00000088658.4|Mybl1|ENSMUSG00000025912.10|myeloblastosis oncogene-like 1
mm10_v2_chr15_+_82127916_82128001	0.0452527	CACAGUG	ENSMUST00000089174.4|Ccdc134|ENSMUSG00000068114.6|coiled-coil domain containing 134
mm10_v2_chr5_+_88720855_88720876	0.0452244	CACAGUG	ENSMUST00000113229.1|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B 	ENSMUST00000006424.7|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B
mm10_v2_chr11_-_82829024_82829043	0.0451321	CACAGUG	ENSMUST00000021036.6|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000074515.4|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein 	ENSMUST00000103218.2|Rffl|ENSMUSG00000020696.12|ring finger and FYVE like domain containing protein
mm10_v2_chr16_+_72663143_72663189	0.0440139	CACAGUG	ENSMUST00000023600.7|Robo1|ENSMUSG00000022883.10|roundabout homolog 1 (Drosophila)
mm10_v2_chr5_-_120588613_120588651	0.0438936	CACAGUG	ENSMUST00000046426.8|Tpcn1|ENSMUSG00000032741.8|two pore channel 1
mm10_v2_chr1_+_159737510_159737510	0.0433078	CACAGUG	ENSMUST00000111669.3|Tnr|ENSMUSG00000015829.8|tenascin R
mm10_v2_chr11_+_106036867_106036924	0.0416855	CACAGUG	ENSMUST00000058438.8|Dcaf7|ENSMUSG00000049354.8|DDB1 and CUL4 associated factor 7
mm10_v2_chr17_+_26138661_26138950	0.0400099	CACAGUG	ENSMUST00000074370.3|Axin1|ENSMUSG00000024182.10|axin 1 	ENSMUST00000118904.2|Axin1|ENSMUSG00000024182.10|axin 1 	ENSMUST00000163421.1|Axin1|ENSMUSG00000024182.10|axin 1
mm10_v2_chr17_+_47737030_47737107	0.039977	CACAGUG	ENSMUST00000086932.3|Tfeb|ENSMUSG00000023990.12|transcription factor EB
mm10_v2_chr12_-_51829525_51829553	0.0366552	CACAGUG	ENSMUST00000179265.1|Hectd1|ENSMUSG00000035247.9|HECT domain containing 1 	ENSMUST00000042052.8|Hectd1|ENSMUSG00000035247.9|HECT domain containing 1
mm10_v2_chr11_+_105178765_105178807	0.0359012	CACAGUG	ENSMUST00000106939.2|Tlk2|ENSMUSG00000020694.10|tousled-like kinase 2 (Arabidopsis)
mm10_v2_chr16_-_17576206_17576237	0.0326487	CACAGUG	ENSMUST00000090165.4|Slc7a4|ENSMUSG00000022756.9|solute carrier family 7 (cationic amino acid transporter, y+ system), member 4 	ENSMUST00000164623.1|Slc7a4|ENSMUSG00000022756.9|solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
mm10_v2_chr4_-_135272798_135272819	0.0320466	CACAGUG	ENSMUST00000037099.8|Clic4|ENSMUSG00000037242.8|chloride intracellular channel 4 (mitochondrial)
mm10_v2_chr12_+_111538101_111538243	0.0319815	CACAGUG	ENSMUST00000166123.1|Eif5|ENSMUSG00000021282.10|eukaryotic translation initiation factor 5
mm10_v2_chr4_-_124862171_124862261	0.028989	CACAGUG	ENSMUST00000064444.7|Maneal|ENSMUSG00000042763.9|mannosidase, endo-alpha-like
mm10_v2_chr2_-_80128834_80128996	0.0288465	CACAGUG	ENSMUST00000102654.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102655.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr13_+_81783220_81783307	0.0286944	CACAGUG	ENSMUST00000022009.8|Cetn3|ENSMUSG00000021537.8|centrin 3
mm10_v2_chr7_+_126776939_126777213	0.026111	CACAGUG	ENSMUST00000038614.5|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000170882.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106359.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106357.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000145762.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000132643.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila) 	ENSMUST00000106356.1|Ypel3|ENSMUSG00000042675.9|yippee-like 3 (Drosophila)
mm10_v2_chr7_+_24636566_24636589	0.0237888	CACAGUG	ENSMUST00000080718.4|Lypd3|ENSMUSG00000057454.4|Ly6/Plaur domain containing 3
mm10_v2_chr17_+_33929514_33929586	0.0224947	CACAGUG	ENSMUST00000047503.9|Rgl2|ENSMUSG00000041354.9|ral guanine nucleotide dissociation stimulator-like 2
mm10_v2_chr18_+_8694077_8694077	0.0220707	CACAGUG	ENSMUST00000171469.1|Gm5819|ENSMUSG00000092097.1|predicted gene 5819
mm10_v2_chr11_-_65269941_65269954	0.0212871	CACAGUG	ENSMUST00000102635.3|Myocd|ENSMUSG00000020542.12|myocardin
mm10_v2_chr6_+_116338013_116338083	0.0208764	CACAGUG	ENSMUST00000079012.6|March8|ENSMUSG00000025702.9|membrane-associated ring finger (C3HC4) 8 	ENSMUST00000101032.3|March8|ENSMUSG00000025702.9|membrane-associated ring finger (C3HC4) 8
mm10_v2_chr11_-_86544754_86544805	0.0194764	CACAGUG	ENSMUST00000138810.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000058286.2|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000154617.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1
mm10_v2_chrX_+_101254528_101254574	0.0192608	CACAGUG	ENSMUST00000062000.4|Foxo4|ENSMUSG00000042903.7|forkhead box O4
mm10_v2_chr7_-_116443439_116443462	0.0180208	CACAGUG	ENSMUST00000170430.1|Pik3c2a|ENSMUSG00000030660.8|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm10_v2_chr2_-_118549668_118549687	0.0170657	CACAGUG	ENSMUST00000090219.6|Bmf|ENSMUSG00000040093.9|BCL2 modifying factor
mm10_v2_chr1_+_93803945_93803998	0.0159083	CACAGUG	ENSMUST00000027505.6|Ing5|ENSMUSG00000026283.7|inhibitor of growth family, member 5
mm10_v2_chr17_-_12992188_12992226	0.00860303	CACAGUG	ENSMUST00000159986.1|Wtap|ENSMUSG00000060475.6|Wilms' tumour 1-associating protein
mm10_v2_chr11_-_85235065_85235137	0.00677043	CACAGUG	ENSMUST00000018625.9|Appbp2|ENSMUSG00000018481.9|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm10_v2_chr8_+_104101625_104101650	0.0057148	CACAGUG	ENSMUST00000034339.8|Cdh5|ENSMUSG00000031871.8|cadherin 5
mm10_v2_chrX_+_93286499_93286522	0.00508135	CACAGUG	ENSMUST00000046565.7|Arx|ENSMUSG00000035277.9|aristaless related homeobox 	ENSMUST00000113947.2|Arx|ENSMUSG00000035277.9|aristaless related homeobox
mm10_v2_chr5_-_113993873_113993902	0.00498232	CACAGUG	ENSMUST00000159592.1|Ssh1|ENSMUSG00000042121.10|slingshot homolog 1 (Drosophila)
mm10_v2_chr15_-_60824942_60825080	0.00423571	CACAGUG	ENSMUST00000100635.3|Fam84b|ENSMUSG00000072568.3|family with sequence similarity 84, member B
mm10_v2_chr17_-_31855782_31855802	0.000771289	CACAGUG	ENSMUST00000024839.4|Sik1|ENSMUSG00000024042.6|salt inducible kinase 1
mm10_v2_chr18_+_23752333_23752401	0.000532274	CACAGUG	ENSMUST00000170802.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000155708.1|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2 	ENSMUST00000118826.2|Mapre2|ENSMUSG00000024277.8|microtubule-associated protein, RP/EB family, member 2
