mm10_v2_chr6_-_141946960_141946964	1.22337	Brca1	ENSMUST00000042119.5|Slco1a1|ENSMUSG00000041698.5|solute carrier organic anion transporter family, member 1a1
mm10_v2_chr10_+_127898515_127898532	1.12547	Brca1	ENSMUST00000047134.7|Sdr9c7|ENSMUSG00000040127.7|4short chain dehydrogenase/reductase family 9C, member 7
mm10_v2_chr6_-_141946791_141946821	1.08359	Brca1	ENSMUST00000168119.1|Slco1a1|ENSMUSG00000041698.5|solute carrier organic anion transporter family, member 1a1
mm10_v2_chr3_+_87906321_87906356	0.769076	Brca1	ENSMUST00000005017.8|Hdgf|ENSMUSG00000004897.10|hepatoma-derived growth factor
mm10_v2_chr6_+_122006798_122006798	0.665831	Brca1	ENSMUST00000081777.6|Mug2|ENSMUSG00000030131.7|murinoglobulin 2
mm10_v2_chr15_+_62178175_62178286	0.636818	Brca1	ENSMUST00000182476.1|Pvt1|ENSMUSG00000097039.2|plasmacytoma variant translocation 1
mm10_v2_chr12_+_111039334_111039400	0.601183	Brca1	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr10_-_42276688_42276743	0.590297	Brca1	ENSMUST00000175881.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3 	ENSMUST00000056974.3|Foxo3|ENSMUSG00000048756.5|forkhead box O3
mm10_v2_chr11_-_11890368_11890379	0.572026	Brca1	ENSMUST00000155690.1|Ddc|ENSMUSG00000020182.10|dopa decarboxylase
mm10_v2_chr7_-_44375006_44375035	0.554569	Brca1	ENSMUST00000107933.1|1700008O03Rik|ENSMUSG00000008028.9|RIKEN cDNA 1700008O03 gene
mm10_v2_chr19_-_39649046_39649061	0.536011	Brca1	ENSMUST00000067328.6|Cyp2c67|ENSMUSG00000062624.5|cytochrome P450, family 2, subfamily c, polypeptide 67
mm10_v2_chr6_-_55132841_55132973	0.51999	Brca1	ENSMUST00000164012.1|Crhr2|ENSMUSG00000003476.9|corticotropin releasing hormone receptor 2
mm10_v2_chr8_-_11008458_11008458	0.51756	Brca1	ENSMUST00000040514.6|Irs2|ENSMUSG00000038894.6|insulin receptor substrate 2
mm10_v2_chr4_+_43632185_43632185	0.51455	Brca1	ENSMUST00000107874.2|Npr2|ENSMUSG00000028469.9|natriuretic peptide receptor 2
mm10_v2_chr10_-_42276744_42276763	0.50753	Brca1	ENSMUST00000105502.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3 	ENSMUST00000105501.1|Foxo3|ENSMUSG00000048756.5|forkhead box O3
mm10_v2_chr11_-_102230091_102230124	0.498131	Brca1	ENSMUST00000008999.5|Hdac5|ENSMUSG00000008855.11|histone deacetylase 5
mm10_v2_chr11_-_102230127_102230166	0.44923	Brca1	ENSMUST00000107150.1|Hdac5|ENSMUSG00000008855.11|histone deacetylase 5 	ENSMUST00000156337.1|Hdac5|ENSMUSG00000008855.11|histone deacetylase 5 	ENSMUST00000107151.2|Hdac5|ENSMUSG00000008855.11|histone deacetylase 5 	ENSMUST00000107152.2|Hdac5|ENSMUSG00000008855.11|histone deacetylase 5
mm10_v2_chr2_-_25224653_25224702	0.43602	Brca1	ENSMUST00000043584.4|Tubb4b|ENSMUSG00000036752.4|tubulin, beta 4B class IVB
mm10_v2_chr5_+_136953246_136953406	0.420147	Brca1	ENSMUST00000111094.1|Fis1|ENSMUSG00000019054.7|fission 1 (mitochondrial outer membrane) homolog (yeast) 	ENSMUST00000111097.1|Fis1|ENSMUSG00000019054.7|fission 1 (mitochondrial outer membrane) homolog (yeast)
mm10_v2_chr6_+_116264186_116264225	0.419123	Brca1	ENSMUST00000036503.7|Zfand4|ENSMUSG00000042213.10|zinc finger, AN1-type domain 4 	ENSMUST00000112900.3|Zfand4|ENSMUSG00000042213.10|zinc finger, AN1-type domain 4
mm10_v2_chr6_-_55133014_55133029	0.418638	Brca1	ENSMUST00000003568.8|Crhr2|ENSMUSG00000003476.9|corticotropin releasing hormone receptor 2
mm10_v2_chr17_+_35841668_35841683	0.417722	Brca1	ENSMUST00000174124.1|Mdc1|ENSMUSG00000061607.8|mediator of DNA damage checkpoint 1
mm10_v2_chr11_-_98625661_98625661	0.416312	Brca1	ENSMUST00000104933.1|Gm12355|ENSMUSG00000078134.1|predicted gene 12355
mm10_v2_chr4_+_43631935_43631935	0.398448	Brca1	ENSMUST00000030191.8|Npr2|ENSMUSG00000028469.9|natriuretic peptide receptor 2
mm10_v2_chrX_+_112240474_112240583	0.387029	Brca1	ENSMUST00000164272.2|4933403O08Rik|ENSMUSG00000079460.5|RIKEN cDNA 4933403O08 gene 	ENSMUST00000132037.1|4933403O08Rik|ENSMUSG00000079460.5|RIKEN cDNA 4933403O08 gene
mm10_v2_chr14_-_61556746_61556781	0.385354	Brca1	ENSMUST00000100496.4|Spryd7|ENSMUSG00000021930.8|SPRY domain containing 7
mm10_v2_chr15_+_102460076_102460108	0.368375	Brca1	ENSMUST00000164688.1|Prr13|ENSMUSG00000023048.7|proline rich 13
mm10_v2_chr1_-_171281181_171281192	0.362149	Brca1	ENSMUST00000073120.4|Ppox|ENSMUSG00000062729.5|protoporphyrinogen oxidase
mm10_v2_chr14_+_52844465_52844554	0.360453	Brca1	ENSMUST00000181360.1|Trav12d-1|ENSMUSG00000095689.4|T cell receptor alpha variable 12D-1 	ENSMUST00000183652.1|Trav12d-1|ENSMUSG00000095689.4|T cell receptor alpha variable 12D-1
mm10_v2_chr11_+_97415527_97415538	0.35565	Brca1	ENSMUST00000121799.1|Arhgap23|ENSMUSG00000049807.10|Rho GTPase activating protein 23
mm10_v2_chr11_-_8973266_8973266	0.351547	Brca1	ENSMUST00000154153.1|Pkd1l1|ENSMUSG00000046634.6|polycystic kidney disease 1 like 1
mm10_v2_chr10_-_42583628_42583639	0.337948	Brca1	ENSMUST00000019938.4|Nr2e1|ENSMUSG00000019803.5|nuclear receptor subfamily 2, group E, member 1
mm10_v2_chrX_-_64276937_64277002	0.322235	Brca1	ENSMUST00000114679.1|Slitrk4|ENSMUSG00000046699.8|SLIT and NTRK-like family, member 4 	ENSMUST00000069926.7|Slitrk4|ENSMUSG00000046699.8|SLIT and NTRK-like family, member 4
mm10_v2_chr11_+_82035569_82035585	0.317575	Brca1	ENSMUST00000000193.5|Ccl2|ENSMUSG00000035385.5|chemokine (C-C motif) ligand 2
mm10_v2_chr6_-_120357342_120357400	0.317127	Brca1	ENSMUST00000163827.1|Ccdc77|ENSMUSG00000030177.8|coiled-coil domain containing 77
mm10_v2_chr11_-_75454656_75454721	0.314515	Brca1	ENSMUST00000173320.1|Wdr81|ENSMUSG00000045374.12|WD repeat domain 81
mm10_v2_chr2_-_58052832_58052870	0.308531	Brca1	ENSMUST00000090940.5|Ermn|ENSMUSG00000026830.9|ermin, ERM-like protein
mm10_v2_chr14_+_32833955_32833966	0.306185	Brca1	ENSMUST00000104926.2|Fam170b|ENSMUSG00000078127.2|family with sequence similarity 170, member B
mm10_v2_chr8_-_70700070_70700088	0.301538	Brca1	ENSMUST00000116172.1|Gm11175|ENSMUSG00000080058.1|predicted gene 11175
mm10_v2_chr5_-_25223153_25223153	0.294904	Brca1	ENSMUST00000066954.1|E130116L18Rik|ENSMUSG00000054116.1|RIKEN cDNA E130116L18 gene
mm10_v2_chr19_+_46152505_46152514	0.294711	Brca1	ENSMUST00000026254.7|Gbf1|ENSMUSG00000025224.8|golgi-specific brefeldin A-resistance factor 1
mm10_v2_chr17_+_71204647_71204693	0.292378	Brca1	ENSMUST00000126681.1|Lpin2|ENSMUSG00000024052.11|lipin 2
mm10_v2_chr12_-_110695860_110695951	0.292154	Brca1	ENSMUST00000149189.1|Hsp90aa1|ENSMUSG00000021270.7|heat shock protein 90, alpha (cytosolic), class A member 1
mm10_v2_chr16_+_56204313_56204338	0.28838	Brca1	ENSMUST00000160116.1|Impg2|ENSMUSG00000035270.9|interphotoreceptor matrix proteoglycan 2 	ENSMUST00000069936.7|Impg2|ENSMUSG00000035270.9|interphotoreceptor matrix proteoglycan 2
mm10_v2_chr13_-_98891036_98891063	0.286115	Brca1	ENSMUST00000109399.2|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr14_-_61556881_61556890	0.285304	Brca1	ENSMUST00000022497.8|Spryd7|ENSMUSG00000021930.8|SPRY domain containing 7
mm10_v2_chr7_+_44468020_44468045	0.284493	Brca1	ENSMUST00000117324.1|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2 	ENSMUST00000120852.1|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2 	ENSMUST00000118628.1|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2
mm10_v2_chr12_+_4082596_4082638	0.283855	Brca1	ENSMUST00000049584.5|Dnajc27|ENSMUSG00000020657.9|DnaJ (Hsp40) homolog, subfamily C, member 27
mm10_v2_chr4_-_43046196_43046220	0.282032	Brca1	ENSMUST00000036462.5|Fam214b|ENSMUSG00000036002.6|family with sequence similarity 214, member B
mm10_v2_chr5_-_115158169_115158180	0.281744	Brca1	ENSMUST00000053271.5|Mlec|ENSMUSG00000048578.7|malectin 	ENSMUST00000112121.1|Mlec|ENSMUSG00000048578.7|malectin
mm10_v2_chr19_-_24225015_24225033	0.275561	Brca1	ENSMUST00000099558.4|Tjp2|ENSMUSG00000024812.9|tight junction protein 2
mm10_v2_chr5_+_147077050_147077050	0.273094	Brca1	ENSMUST00000050970.3|Polr1d|ENSMUSG00000029642.7|polymerase (RNA) I polypeptide D
mm10_v2_chr12_+_103388656_103388723	0.270432	Brca1	ENSMUST00000101094.2|Otub2|ENSMUSG00000021203.9|OTU domain, ubiquitin aldehyde binding 2 	ENSMUST00000021620.6|Otub2|ENSMUSG00000021203.9|OTU domain, ubiquitin aldehyde binding 2
mm10_v2_chr12_-_10900296_10900318	0.267829	Brca1	ENSMUST00000085735.2|Pgk1-rs7|ENSMUSG00000066632.2|phosphoglycerate kinase-1, related sequence-7
mm10_v2_chr15_+_82016420_82016515	0.263507	Brca1	ENSMUST00000168581.1|Xrcc6|ENSMUSG00000022471.7|X-ray repair complementing defective repair in Chinese hamster cells 6 	ENSMUST00000170630.1|Xrcc6|ENSMUSG00000022471.7|X-ray repair complementing defective repair in Chinese hamster cells 6 	ENSMUST00000164779.1|Xrcc6|ENSMUSG00000022471.7|X-ray repair complementing defective repair in Chinese hamster cells 6
mm10_v2_chr3_+_92316705_92316705	0.257538	Brca1	ENSMUST00000061038.2|Sprr2b|ENSMUSG00000050092.2|small proline-rich protein 2B
mm10_v2_chr5_-_138187177_138187237	0.255978	Brca1	ENSMUST00000110937.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000139276.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000048698.7|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000123415.1|Taf6|ENSMUSG00000036980.7|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr2_-_34870921_34870980	0.25076	Brca1	ENSMUST00000028225.5|Psmd5|ENSMUSG00000026869.6|proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
mm10_v2_chr12_-_99393010_99393090	0.24495	Brca1	ENSMUST00000177451.1|Foxn3|ENSMUSG00000033713.5|forkhead box N3
mm10_v2_chr13_-_41109988_41109988	0.239404	Brca1	ENSMUST00000021791.6|Gcm2|ENSMUSG00000021362.6|glial cells missing homolog 2 (Drosophila)
mm10_v2_chr12_+_108894272_108894317	0.238617	Brca1	ENSMUST00000167816.1|Wdr25|ENSMUSG00000040877.9|WD repeat domain 25 	ENSMUST00000047115.7|Wdr25|ENSMUSG00000040877.9|WD repeat domain 25
mm10_v2_chrM_+_9452_9468	0.238563	Brca1	ENSMUST00000082411.1|mt-Nd3|ENSMUSG00000064360.1|mitochondrially encoded NADH dehydrogenase 3
mm10_v2_chr9_-_112187766_112187862	0.226781	Brca1	ENSMUST00000111872.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21 	ENSMUST00000164754.2|Arpp21|ENSMUSG00000032503.11|cyclic AMP-regulated phosphoprotein, 21
mm10_v2_chr5_-_72642725_72642752	0.226179	Brca1	ENSMUST00000087213.5|Cnga1|ENSMUSG00000067220.6|cyclic nucleotide gated channel alpha 1
mm10_v2_chr16_-_11066141_11066165	0.224244	Brca1	ENSMUST00000162323.1|Litaf|ENSMUSG00000022500.8|LPS-induced TN factor
mm10_v2_chr15_-_97020322_97020336	0.223333	Brca1	ENSMUST00000166223.1|Slc38a4|ENSMUSG00000022464.7|solute carrier family 38, member 4
mm10_v2_chr11_-_69920581_69920630	0.221779	Brca1	ENSMUST00000108610.1|Eif5a|ENSMUSG00000078812.4|eukaryotic translation initiation factor 5A
mm10_v2_chr1_-_132707304_132707326	0.217191	Brca1	ENSMUST00000043189.7|Nfasc|ENSMUSG00000026442.8|neurofascin
mm10_v2_chr1_-_67038824_67038872	0.214516	Brca1	ENSMUST00000119559.1|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000149996.1|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000027149.5|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1 	ENSMUST00000113979.3|Lancl1|ENSMUSG00000026000.10|LanC (bacterial lantibiotic synthetase component C)-like 1
mm10_v2_chrX_+_150594420_150594478	0.212453	Brca1	ENSMUST00000112713.2|Pfkfb1|ENSMUSG00000025271.7|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
mm10_v2_chr13_-_98890974_98891035	0.211529	Brca1	ENSMUST00000179301.1|Tnpo1|ENSMUSG00000009470.10|transportin 1 	ENSMUST00000179271.1|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr4_-_41464816_41464892	0.210712	Brca1	ENSMUST00000108055.2|Kif24|ENSMUSG00000028438.10|kinesin family member 24 	ENSMUST00000154535.1|Kif24|ENSMUSG00000028438.10|kinesin family member 24 	ENSMUST00000030148.5|Kif24|ENSMUSG00000028438.10|kinesin family member 24
mm10_v2_chr19_+_6047081_6047104	0.210374	Brca1	ENSMUST00000025723.8|Syvn1|ENSMUSG00000024807.11|synovial apoptosis inhibitor 1, synoviolin
mm10_v2_chr7_+_28179469_28179535	0.206839	Brca1	ENSMUST00000085901.6|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b 	ENSMUST00000172761.1|Dyrk1b|ENSMUSG00000002409.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b
mm10_v2_chr9_+_108392820_108392843	0.206178	Brca1	ENSMUST00000035234.4|1700102P08Rik|ENSMUSG00000032611.4|RIKEN cDNA 1700102P08 gene
mm10_v2_chr13_+_55714624_55714650	0.201921	Brca1	ENSMUST00000021959.9|Txndc15|ENSMUSG00000021497.9|thioredoxin domain containing 15
mm10_v2_chr11_+_6291660_6291687	0.201045	Brca1	ENSMUST00000101554.2|Ogdh|ENSMUSG00000020456.11|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) 	ENSMUST00000093350.3|Ogdh|ENSMUSG00000020456.11|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
mm10_v2_chr7_+_123377982_123378086	0.198974	Brca1	ENSMUST00000033025.5|Lcmt1|ENSMUSG00000030763.6|leucine carboxyl methyltransferase 1
mm10_v2_chr15_+_82016369_82016419	0.196357	Brca1	ENSMUST00000069530.6|Xrcc6|ENSMUSG00000022471.7|X-ray repair complementing defective repair in Chinese hamster cells 6
mm10_v2_chr9_-_109082372_109082414	0.194346	Brca1	ENSMUST00000167504.1|Tma7|ENSMUSG00000091537.1|translational machinery associated 7 homolog (S. cerevisiae)
mm10_v2_chr12_+_24974914_24974948	0.19255	Brca1	ENSMUST00000066652.5|Kidins220|ENSMUSG00000036333.10|kinase D-interacting substrate 220
mm10_v2_chr7_+_51878967_51879000	0.191517	Brca1	ENSMUST00000051912.6|Gas2|ENSMUSG00000030498.8|growth arrest specific 2
mm10_v2_chr3_+_5218589_5218614	0.190359	Brca1	ENSMUST00000177488.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr15_-_82016134_82016170	0.18951	Brca1	ENSMUST00000152227.1|Desi1|ENSMUSG00000022472.10|desumoylating isopeptidase 1
mm10_v2_chr17_+_23600856_23600941	0.186785	Brca1	ENSMUST00000095595.2|Zscan10|ENSMUSG00000023902.12|zinc finger and SCAN domain containing 10 	ENSMUST00000115509.1|Zscan10|ENSMUSG00000023902.12|zinc finger and SCAN domain containing 10 	ENSMUST00000120967.1|Zscan10|ENSMUSG00000023902.12|zinc finger and SCAN domain containing 10 	ENSMUST00000148062.1|Zscan10|ENSMUSG00000023902.12|zinc finger and SCAN domain containing 10 	ENSMUST00000129227.1|Zscan10|ENSMUSG00000023902.12|zinc finger and SCAN domain containing 10 	ENSMUST00000123866.1|Zscan10|ENSMUSG00000023902.12|zinc finger and SCAN domain containing 10
mm10_v2_chr11_+_49280150_49280150	0.183551	Brca1	ENSMUST00000078932.1|Olfr1393|ENSMUSG00000059864.1|olfactory receptor 1393
mm10_v2_chr13_+_55152640_55152640	0.183246	Brca1	ENSMUST00000005452.5|Fgfr4|ENSMUSG00000005320.9|fibroblast growth factor receptor 4
mm10_v2_chr13_-_31559333_31559333	0.18293	Brca1	ENSMUST00000170573.1|A530084C06Rik|ENSMUSG00000090863.1|RIKEN cDNA A530084C06 gene
mm10_v2_chr7_+_44468051_44468072	0.182395	Brca1	ENSMUST00000118493.1|Josd2|ENSMUSG00000038695.6|Josephin domain containing 2
mm10_v2_chr19_+_10204014_10204014	0.179003	Brca1	ENSMUST00000040372.7|Tmem258|ENSMUSG00000036372.8|transmembrane protein 258
mm10_v2_chr7_+_103731928_103731928	0.177684	Brca1	ENSMUST00000098193.1|Olfr628|ENSMUSG00000096516.1|olfactory receptor 628
mm10_v2_chr10_-_41579207_41579207	0.177214	Brca1	ENSMUST00000095227.3|Ccdc162|ENSMUSG00000075225.5|coiled-coil domain containing 162
mm10_v2_chr15_-_102366314_102366338	0.175031	Brca1	ENSMUST00000078508.5|Sp7|ENSMUSG00000060284.6|Sp7 transcription factor 7
mm10_v2_chr7_+_135396330_135396362	0.170845	Brca1	ENSMUST00000097982.2|4930544L04Rik|ENSMUSG00000073803.2|RIKEN cDNA 4930544L04 gene
mm10_v2_chr11_-_96747405_96747416	0.166451	Brca1	ENSMUST00000180492.1|2010300F17Rik|ENSMUSG00000097289.1|RIKEN cDNA 2010300F17 gene
mm10_v2_chr2_+_109693563_109693624	0.165764	Brca1	ENSMUST00000111045.2|Bdnf|ENSMUSG00000048482.8|brain derived neurotrophic factor
mm10_v2_chrM_+_8600_8616	0.16476	Brca1	ENSMUST00000082409.1|mt-Co3|ENSMUSG00000064358.1|mitochondrially encoded cytochrome c oxidase III
mm10_v2_chr11_-_109472611_109472688	0.164387	Brca1	ENSMUST00000168740.1|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr1_-_170867761_170867784	0.160484	Brca1	ENSMUST00000027974.6|Atf6|ENSMUSG00000026663.6|activating transcription factor 6
mm10_v2_chr11_+_78826575_78826618	0.158872	Brca1	ENSMUST00000147875.2|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9 	ENSMUST00000141321.1|Lyrm9|ENSMUSG00000072640.5|LYR motif containing 9
mm10_v2_chr7_+_101896817_101896961	0.156257	Brca1	ENSMUST00000143835.1|Anapc15|ENSMUSG00000030649.11|anaphase prompoting complex C subunit 15
mm10_v2_chr17_+_40811089_40811133	0.155144	Brca1	ENSMUST00000024721.7|Rhag|ENSMUSG00000023926.7|Rhesus blood group-associated A glycoprotein
mm10_v2_chr11_+_70970181_70970213	0.154565	Brca1	ENSMUST00000018593.3|Rpain|ENSMUSG00000018449.6|RPA interacting protein
mm10_v2_chr10_-_33624587_33624769	0.154295	Brca1	ENSMUST00000160299.1|Clvs2|ENSMUSG00000019785.7|clavesin 2 	ENSMUST00000019920.6|Clvs2|ENSMUSG00000019785.7|clavesin 2
mm10_v2_chr11_+_6291607_6291655	0.154084	Brca1	ENSMUST00000003461.8|Ogdh|ENSMUSG00000020456.11|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
mm10_v2_chr9_+_44773191_44773263	0.153833	Brca1	ENSMUST00000147559.1|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chr9_+_59589288_59589353	0.153062	Brca1	ENSMUST00000121266.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000118164.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr2_-_91182848_91182933	0.152317	Brca1	ENSMUST00000111370.2|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain 	ENSMUST00000111376.1|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain 	ENSMUST00000099723.2|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain
mm10_v2_chr5_+_19907774_19907861	0.150922	Brca1	ENSMUST00000115267.2|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chr8_+_25017211_25017305	0.150246	Brca1	ENSMUST00000033961.5|Tm2d2|ENSMUSG00000031556.5|TM2 domain containing 2
mm10_v2_chr1_+_179961110_179961110	0.150074	Brca1	ENSMUST00000076687.5|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000097450.3|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr14_-_52305056_52305130	0.150029	Brca1	ENSMUST00000174853.1|Mettl3|ENSMUSG00000022160.11|methyltransferase like 3 	ENSMUST00000022767.9|Mettl3|ENSMUSG00000022160.11|methyltransferase like 3
mm10_v2_chr5_+_19907502_19907551	0.148697	Brca1	ENSMUST00000101558.3|Magi2|ENSMUSG00000040003.11|membrane associated guanylate kinase, WW and PDZ domain containing 2
mm10_v2_chrX_+_74309089_74309161	0.148129	Brca1	ENSMUST00000130581.1|Gdi1|ENSMUSG00000015291.4|guanosine diphosphate (GDP) dissociation inhibitor 1
mm10_v2_chrM_+_7759_7927	0.147977	Brca1	ENSMUST00000082407.1|mt-Atp8|ENSMUSG00000064356.3|mitochondrially encoded ATP synthase 8 	ENSMUST00000082408.1|mt-Atp6|ENSMUSG00000064357.1|mitochondrially encoded ATP synthase 6
mm10_v2_chr1_-_75278345_75278440	0.147579	Brca1	ENSMUST00000039534.4|Resp18|ENSMUSG00000033061.9|regulated endocrine-specific protein 18
mm10_v2_chr2_-_155945282_155945367	0.147433	Brca1	ENSMUST00000040162.2|Gdf5|ENSMUSG00000038259.4|growth differentiation factor 5
mm10_v2_chr11_-_96916448_96916531	0.146291	Brca1	ENSMUST00000103152.4|Cdk5rap3|ENSMUSG00000018669.8|CDK5 regulatory subunit associated protein 3
mm10_v2_chr10_-_129160982_129160982	0.143083	Brca1	ENSMUST00000078914.2|Olfr771|ENSMUSG00000061367.2|olfactory receptor 771
mm10_v2_chr3_-_90433603_90433636	0.14279	Brca1	ENSMUST00000029542.5|Ints3|ENSMUSG00000027933.5|integrator complex subunit 3 	ENSMUST00000071488.3|Ints3|ENSMUSG00000027933.5|integrator complex subunit 3
mm10_v2_chr4_+_133176336_133176371	0.141922	Brca1	ENSMUST00000105912.1|Wasf2|ENSMUSG00000028868.7|WAS protein family, member 2
mm10_v2_chr12_-_69159109_69159186	0.141596	Brca1	ENSMUST00000037023.8|Rps29|ENSMUSG00000034892.8|ribosomal protein S29
mm10_v2_chr17_-_47611449_47611544	0.140775	Brca1	ENSMUST00000024783.8|Bysl|ENSMUSG00000023988.8|bystin-like
mm10_v2_chr19_+_45560569_45560644	0.140482	Brca1	ENSMUST00000047057.7|Dpcd|ENSMUSG00000041035.7|deleted in primary ciliary dyskinesia
mm10_v2_chr6_-_122340499_122340510	0.139051	Brca1	ENSMUST00000160843.1|Phc1|ENSMUSG00000040669.8|polyhomeotic-like 1 (Drosophila)
mm10_v2_chr4_-_131838231_131838291	0.138014	Brca1	ENSMUST00000030741.2|Ptpru|ENSMUSG00000028909.11|protein tyrosine phosphatase, receptor type, U 	ENSMUST00000105987.2|Ptpru|ENSMUSG00000028909.11|protein tyrosine phosphatase, receptor type, U
mm10_v2_chr2_-_91183017_91183060	0.13722	Brca1	ENSMUST00000066420.5|Madd|ENSMUSG00000040687.10|MAP-kinase activating death domain
mm10_v2_chr7_+_5080214_5080298	0.135472	Brca1	ENSMUST00000098845.3|Epn1|ENSMUSG00000035203.9|epsin 1 	ENSMUST00000146317.1|Epn1|ENSMUSG00000035203.9|epsin 1 	ENSMUST00000153169.1|Epn1|ENSMUSG00000035203.9|epsin 1 	ENSMUST00000045277.6|Epn1|ENSMUSG00000035203.9|epsin 1
mm10_v2_chr11_+_70970467_70970517	0.13466	Brca1	ENSMUST00000178822.1|Rpain|ENSMUSG00000018449.6|RPA interacting protein 	ENSMUST00000108529.3|Rpain|ENSMUSG00000018449.6|RPA interacting protein 	ENSMUST00000169965.1|Rpain|ENSMUSG00000018449.6|RPA interacting protein 	ENSMUST00000167509.1|Rpain|ENSMUSG00000018449.6|RPA interacting protein
mm10_v2_chr3_-_138131356_138131381	0.134543	Brca1	ENSMUST00000029805.8|Mttp|ENSMUSG00000028158.8|microsomal triglyceride transfer protein
mm10_v2_chr11_+_97703394_97703455	0.134215	Brca1	ENSMUST00000103147.4|Psmb3|ENSMUSG00000069744.7|proteasome (prosome, macropain) subunit, beta type 3
mm10_v2_chr19_+_44562841_44562879	0.131991	Brca1	ENSMUST00000040455.4|Hif1an|ENSMUSG00000036450.4|hypoxia-inducible factor 1, alpha subunit inhibitor
mm10_v2_chr10_-_116473418_116473514	0.131713	Brca1	ENSMUST00000087965.4|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4 	ENSMUST00000164271.1|Kcnmb4|ENSMUSG00000054934.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
mm10_v2_chr2_+_121008403_121008481	0.130206	Brca1	ENSMUST00000060455.8|Ccndbp1|ENSMUSG00000023572.10|cyclin D-type binding-protein 1 	ENSMUST00000099488.4|Ccndbp1|ENSMUSG00000023572.10|cyclin D-type binding-protein 1 	ENSMUST00000099489.2|Ccndbp1|ENSMUSG00000023572.10|cyclin D-type binding-protein 1 	ENSMUST00000171260.2|Ccndbp1|ENSMUSG00000023572.10|cyclin D-type binding-protein 1
mm10_v2_chr1_+_177729814_177729869	0.129523	Brca1	ENSMUST00000016106.5|1700016C15Rik|ENSMUSG00000015962.5|RIKEN cDNA 1700016C15 gene
mm10_v2_chr13_+_22524051_22524051	0.128392	Brca1	ENSMUST00000091729.1|Vmn1r203|ENSMUSG00000069289.1|vomeronasal 1 receptor 203
mm10_v2_chr7_-_102888151_102888151	0.127698	Brca1	ENSMUST00000078191.2|Olfr569|ENSMUSG00000062142.4|olfactory receptor 569
mm10_v2_chr7_+_129591859_129591871	0.127593	Brca1	ENSMUST00000084519.5|Wdr11|ENSMUSG00000042055.7|WD repeat domain 11
mm10_v2_chr4_+_135120640_135120660	0.125669	Brca1	ENSMUST00000056977.7|Runx3|ENSMUSG00000070691.4|runt related transcription factor 3
mm10_v2_chr9_-_37657189_37657312	0.124996	Brca1	ENSMUST00000117654.1|Tbrg1|ENSMUSG00000011114.11|transforming growth factor beta regulated gene 1
mm10_v2_chr17_-_34028044_34028076	0.123147	Brca1	ENSMUST00000045467.7|H2-Ke6|ENSMUSG00000073422.4|H2-K region expressed gene 6 	ENSMUST00000114303.3|H2-Ke6|ENSMUSG00000073422.4|H2-K region expressed gene 6
mm10_v2_chr11_+_49523721_49523721	0.11706	Brca1	ENSMUST00000077143.4|Olfr1383|ENSMUSG00000057767.3|olfactory receptor 1383
mm10_v2_chr17_-_70853482_70853546	0.115056	Brca1	ENSMUST00000118283.1|Tgif1|ENSMUSG00000047407.11|TGFB-induced factor homeobox 1
mm10_v2_chr16_+_20589471_20589582	0.114419	Brca1	ENSMUST00000100074.3|Vwa5b2|ENSMUSG00000046613.12|von Willebrand factor A domain containing 5B2 	ENSMUST00000096197.4|Vwa5b2|ENSMUSG00000046613.12|von Willebrand factor A domain containing 5B2
mm10_v2_chr11_-_106998483_106998491	0.108834	Brca1	ENSMUST00000124541.1|Kpna2|ENSMUSG00000018362.8|karyopherin (importin) alpha 2
mm10_v2_chr14_+_53676141_53676141	0.108313	Brca1	ENSMUST00000103662.4|Trav9-4|ENSMUSG00000096678.2|T cell receptor alpha variable 9-4
mm10_v2_chr1_-_153900198_153900210	0.106957	Brca1	ENSMUST00000123490.1|5830403L16Rik|ENSMUSG00000045968.6|RIKEN cDNA 5830403L16 gene
mm10_v2_chr8_-_86580664_86580686	0.10583	Brca1	ENSMUST00000131423.1|Abcc12|ENSMUSG00000036872.10|ATP-binding cassette, sub-family C (CFTR/MRP), member 12 	ENSMUST00000152438.1|Abcc12|ENSMUSG00000036872.10|ATP-binding cassette, sub-family C (CFTR/MRP), member 12
mm10_v2_chr4_+_86053887_86053987	0.10544	Brca1	ENSMUST00000107178.2|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1 	ENSMUST00000048885.5|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1 	ENSMUST00000141889.1|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1 	ENSMUST00000120678.1|Adamtsl1|ENSMUSG00000066113.9|ADAMTS-like 1
mm10_v2_chr11_-_96916407_96916426	0.104925	Brca1	ENSMUST00000130774.1|Cdk5rap3|ENSMUSG00000018669.8|CDK5 regulatory subunit associated protein 3
mm10_v2_chr9_+_44773027_44773100	0.104213	Brca1	ENSMUST00000125877.1|Ift46|ENSMUSG00000002031.5|intraflagellar transport 46
mm10_v2_chr5_-_34187670_34187749	0.103692	Brca1	ENSMUST00000042701.6|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4 	ENSMUST00000119171.1|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4
mm10_v2_chr11_-_96916366_96916406	0.101695	Brca1	ENSMUST00000144731.1|Cdk5rap3|ENSMUSG00000018669.8|CDK5 regulatory subunit associated protein 3 	ENSMUST00000127048.1|Cdk5rap3|ENSMUSG00000018669.8|CDK5 regulatory subunit associated protein 3
mm10_v2_chrX_+_150589907_150589996	0.0988875	Brca1	ENSMUST00000080884.4|Pfkfb1|ENSMUSG00000025271.7|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
mm10_v2_chr11_+_74082907_74082907	0.0979829	Brca1	ENSMUST00000178159.1|Zfp616|ENSMUSG00000069476.7|zinc finger protein 616
mm10_v2_chr13_+_99184733_99184823	0.0972467	Brca1	ENSMUST00000056558.8|Zfp366|ENSMUSG00000050919.8|zinc finger protein 366
mm10_v2_chr11_-_96747419_96747436	0.0971694	Brca1	ENSMUST00000181758.1|2010300F17Rik|ENSMUSG00000097289.1|RIKEN cDNA 2010300F17 gene
mm10_v2_chr7_+_27553244_27553302	0.0970296	Brca1	ENSMUST00000067386.7|2310022A10Rik|ENSMUSG00000049643.9|RIKEN cDNA 2310022A10 gene
mm10_v2_chr19_-_12765447_12765632	0.0962711	Brca1	ENSMUST00000112933.1|Cntf|ENSMUSG00000079415.2|ciliary neurotrophic factor
mm10_v2_chr17_-_25240112_25240158	0.0933637	Brca1	ENSMUST00000038973.6|Gnptg|ENSMUSG00000035521.7|N-acetylglucosamine-1-phosphotransferase, gamma subunit 	ENSMUST00000115154.4|Gnptg|ENSMUSG00000035521.7|N-acetylglucosamine-1-phosphotransferase, gamma subunit
mm10_v2_chr6_+_106118924_106119006	0.092633	Brca1	ENSMUST00000079416.5|Cntn4|ENSMUSG00000064293.8|contactin 4
mm10_v2_chr11_-_109473220_109473294	0.0924972	Brca1	ENSMUST00000070872.6|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr19_-_32466575_32466575	0.0923998	Brca1	ENSMUST00000078034.3|Rpl9-ps6|ENSMUSG00000062456.3|ribosomal protein L9, pseudogene 6
mm10_v2_chr13_-_49320219_49320311	0.0916643	Brca1	ENSMUST00000110086.1|Fgd3|ENSMUSG00000037946.5|FYVE, RhoGEF and PH domain containing 3
mm10_v2_chr19_-_7295394_7295468	0.0914422	Brca1	ENSMUST00000025921.8|Mark2|ENSMUSG00000024969.9|MAP/microtubule affinity-regulating kinase 2
mm10_v2_chr2_-_152831665_152831735	0.0905658	Brca1	ENSMUST00000156688.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000007803.5|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr13_+_42681513_42681564	0.0902117	Brca1	ENSMUST00000149235.1|Phactr1|ENSMUSG00000054728.10|phosphatase and actin regulator 1
mm10_v2_chr8_-_60954726_60954790	0.0874406	Brca1	ENSMUST00000110302.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr2_-_77170534_77170576	0.0860269	Brca1	ENSMUST00000111833.2|Ccdc141|ENSMUSG00000044033.10|coiled-coil domain containing 141
mm10_v2_chr4_+_129058133_129058409	0.0855206	Brca1	ENSMUST00000030584.4|Rnf19b|ENSMUSG00000028793.9|ring finger protein 19B 	ENSMUST00000168461.1|Rnf19b|ENSMUSG00000028793.9|ring finger protein 19B 	ENSMUST00000152565.1|Rnf19b|ENSMUSG00000028793.9|ring finger protein 19B
mm10_v2_chr14_+_105498788_105498788	0.0854609	Brca1	ENSMUST00000022711.1|4930449E01Rik|ENSMUSG00000022116.1|RIKEN cDNA 4930449E01 gene
mm10_v2_chr11_-_58534825_58534825	0.084898	Brca1	ENSMUST00000170009.1|Olfr330|ENSMUSG00000050818.3|olfactory receptor 330
mm10_v2_chr18_+_36952621_36952766	0.0845871	Brca1	ENSMUST00000115661.2|Pcdha2|ENSMUSG00000007440.8|protocadherin alpha 2
mm10_v2_chr5_-_135064063_135064116	0.0832071	Brca1	ENSMUST00000111205.1|Wbscr22|ENSMUSG00000005378.11|Williams Beuren syndrome chromosome region 22 	ENSMUST00000141309.1|Wbscr22|ENSMUSG00000005378.11|Williams Beuren syndrome chromosome region 22
mm10_v2_chr8_-_95853501_95853539	0.0830664	Brca1	ENSMUST00000040481.3|Slc38a7|ENSMUSG00000036534.5|solute carrier family 38, member 7
mm10_v2_chr2_+_174330006_174330126	0.0826743	Brca1	ENSMUST00000109085.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus 	ENSMUST00000109087.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus 	ENSMUST00000109084.1|Gnas|ENSMUSG00000027523.13|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm10_v2_chr12_-_108894116_108894174	0.0824013	Brca1	ENSMUST00000109848.3|Wars|ENSMUSG00000021266.10|tryptophanyl-tRNA synthetase
mm10_v2_chr7_-_18532225_18532269	0.0820156	Brca1	ENSMUST00000094795.4|Psg25|ENSMUSG00000070798.4|pregnancy-specific glycoprotein 25
mm10_v2_chr9_+_51115999_51116006	0.0817664	Brca1	ENSMUST00000114431.2|Btg4|ENSMUSG00000032056.9|B cell translocation gene 4
mm10_v2_chr7_+_24370255_24370312	0.0788941	Brca1	ENSMUST00000171904.1|Kcnn4|ENSMUSG00000054342.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
mm10_v2_chr18_-_15063560_15063617	0.0767954	Brca1	ENSMUST00000168989.1|Kctd1|ENSMUSG00000036225.8|potassium channel tetramerisation domain containing 1
mm10_v2_chr16_+_34651188_34651219	0.0764539	Brca1	ENSMUST00000023530.4|Ropn1|ENSMUSG00000022832.4|ropporin, rhophilin associated protein 1
mm10_v2_chr3_-_88951146_88951213	0.0762147	Brca1	ENSMUST00000173135.1|Dap3|ENSMUSG00000068921.8|death associated protein 3
mm10_v2_chr17_-_6655939_6655939	0.0751264	Brca1	ENSMUST00000179554.1|Dynlt1f|ENSMUSG00000095677.1|dynein light chain Tctex-type 1F
mm10_v2_chr7_+_16816299_16816361	0.0730915	Brca1	ENSMUST00000108495.2|Strn4|ENSMUSG00000030374.9|striatin, calmodulin binding protein 4
mm10_v2_chr13_-_113180897_113180967	0.0730425	Brca1	ENSMUST00000038212.7|Gzmk|ENSMUSG00000042385.8|granzyme K
mm10_v2_chr13_-_22621135_22621135	0.0727231	Brca1	ENSMUST00000110445.2|Vmn1r206|ENSMUSG00000071495.2|vomeronasal 1 receptor 206
mm10_v2_chr1_+_188263034_188263034	0.0695829	Brca1	ENSMUST00000060479.7|Ush2a|ENSMUSG00000026609.9|Usher syndrome 2A (autosomal recessive, mild)
mm10_v2_chr8_+_26977336_26977398	0.0694247	Brca1	ENSMUST00000154256.1|Zfp703|ENSMUSG00000085795.1|zinc finger protein 703 	ENSMUST00000127097.1|Zfp703|ENSMUSG00000085795.1|zinc finger protein 703
mm10_v2_chr17_-_15498263_15498276	0.0690673	Brca1	ENSMUST00000014913.9|Psmb1|ENSMUSG00000014769.9|proteasome (prosome, macropain) subunit, beta type 1
mm10_v2_chr13_+_22087878_22087878	0.0684549	Brca1	ENSMUST00000091739.1|Vmn1r188|ENSMUSG00000069299.1|vomeronasal 1 receptor 188
mm10_v2_chr1_+_192190771_192190821	0.0673788	Brca1	ENSMUST00000078470.5|Kcnh1|ENSMUSG00000058248.6|potassium voltage-gated channel, subfamily H (eag-related), member 1 	ENSMUST00000110844.1|Kcnh1|ENSMUSG00000058248.6|potassium voltage-gated channel, subfamily H (eag-related), member 1
mm10_v2_chr7_-_144939823_144939869	0.0646321	Brca1	ENSMUST00000093962.4|Ccnd1|ENSMUSG00000070348.4|cyclin D1
mm10_v2_chr13_-_22102764_22102764	0.0634281	Brca1	ENSMUST00000075055.2|Vmn1r189|ENSMUSG00000061222.2|vomeronasal 1 receptor 189
mm10_v2_chr1_-_136199598_136199598	0.0623514	Brca1	ENSMUST00000166708.1|Mroh3|ENSMUSG00000087230.2|maestro heat-like repeat family member 3
mm10_v2_chr19_+_56287943_56287996	0.0621237	Brca1	ENSMUST00000166049.1|Habp2|ENSMUSG00000025075.8|hyaluronic acid binding protein 2
mm10_v2_chr4_+_56743406_56743438	0.0603471	Brca1	ENSMUST00000095079.4|Actl7a|ENSMUSG00000070979.4|actin-like 7a
mm10_v2_chr13_+_24943144_24943164	0.0600993	Brca1	ENSMUST00000021773.5|Gpld1|ENSMUSG00000021340.6|glycosylphosphatidylinositol specific phospholipase D1
mm10_v2_chr9_+_89909775_89909924	0.0598665	Brca1	ENSMUST00000034912.4|Rasgrf1|ENSMUSG00000032356.6|RAS protein-specific guanine nucleotide-releasing factor 1 	ENSMUST00000034909.4|Rasgrf1|ENSMUSG00000032356.6|RAS protein-specific guanine nucleotide-releasing factor 1
mm10_v2_chr5_+_143651222_143651246	0.0589262	Brca1	ENSMUST00000110727.1|Cyth3|ENSMUSG00000018001.12|cytohesin 3
mm10_v2_chr5_-_73256555_73256636	0.0570971	Brca1	ENSMUST00000171179.1|Fryl|ENSMUSG00000090491.1|furry homolog-like (Drosophila) 	ENSMUST00000101127.5|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr10_-_77902467_77902536	0.0569799	Brca1	ENSMUST00000057608.4|Lrrc3|ENSMUSG00000051652.4|leucine rich repeat containing 3
mm10_v2_chr8_-_47990535_47990577	0.0556163	Brca1	ENSMUST00000057561.7|Wwc2|ENSMUSG00000031563.7|WW, C2 and coiled-coil domain containing 2
mm10_v2_chr3_-_51277470_51277514	0.0550718	Brca1	ENSMUST00000108053.2|Elf2|ENSMUSG00000037174.12|E74-like factor 2 	ENSMUST00000108051.1|Elf2|ENSMUSG00000037174.12|E74-like factor 2
mm10_v2_chr17_+_7945653_7945653	0.0542466	Brca1	ENSMUST00000097423.2|Rsph3a|ENSMUSG00000073471.2|radial spoke 3A homolog (Chlamydomonas)
mm10_v2_chr8_+_84872105_84872112	0.0529348	Brca1	ENSMUST00000136026.1|Syce2|ENSMUSG00000003824.6|synaptonemal complex central element protein 2 	ENSMUST00000170296.1|Syce2|ENSMUSG00000003824.6|synaptonemal complex central element protein 2
mm10_v2_chr7_+_25317067_25317164	0.0524422	Brca1	ENSMUST00000128119.1|Megf8|ENSMUSG00000045039.9|multiple EGF-like-domains 8
mm10_v2_chr13_+_23034294_23034294	0.0522758	Brca1	ENSMUST00000074252.2|Vmn1r214|ENSMUSG00000061829.2|vomeronasal 1 receptor 214
mm10_v2_chr7_-_80947499_80947579	0.0500606	Brca1	ENSMUST00000120285.1|Sec11a|ENSMUSG00000025724.6|SEC11 homolog A (S. cerevisiae)
mm10_v2_chr2_-_155582656_155582668	0.0496094	Brca1	ENSMUST00000126322.1|Gss|ENSMUSG00000027610.11|glutathione synthetase
mm10_v2_chr10_-_127121125_127121160	0.0491352	Brca1	ENSMUST00000164259.1|Os9|ENSMUSG00000040462.6|amplified in osteosarcoma 	ENSMUST00000080975.4|Os9|ENSMUSG00000040462.6|amplified in osteosarcoma
mm10_v2_chr15_+_97964220_97964271	0.0484705	Brca1	ENSMUST00000064200.7|Tmem106c|ENSMUSG00000052369.7|transmembrane protein 106C
mm10_v2_chr16_+_22009471_22009543	0.0479655	Brca1	ENSMUST00000023561.7|Senp2|ENSMUSG00000022855.8|SUMO/sentrin specific peptidase 2
mm10_v2_chr18_+_11052487_11052510	0.0476287	Brca1	ENSMUST00000047762.7|Gata6|ENSMUSG00000005836.8|GATA binding protein 6
mm10_v2_chr12_+_108792946_108792988	0.0474047	Brca1	ENSMUST00000021692.7|Yy1|ENSMUSG00000021264.11|YY1 transcription factor
mm10_v2_chr10_+_69925766_69925786	0.0454422	Brca1	ENSMUST00000182269.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000183261.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial 	ENSMUST00000183074.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr18_+_36793918_36793937	0.0442421	Brca1	ENSMUST00000001419.8|Zmat2|ENSMUSG00000001383.8|zinc finger, matrin type 2
mm10_v2_chr1_+_74791516_74791516	0.0427573	Brca1	ENSMUST00000006718.8|Wnt10a|ENSMUSG00000026167.8|wingless related MMTV integration site 10a
mm10_v2_chr5_-_123666682_123666695	0.0425141	Brca1	ENSMUST00000149410.1|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1
mm10_v2_chr12_+_4082574_4082594	0.0400565	Brca1	ENSMUST00000020986.7|Dnajc27|ENSMUSG00000020657.9|DnaJ (Hsp40) homolog, subfamily C, member 27
mm10_v2_chrX_+_71663665_71663671	0.0389167	Brca1	ENSMUST00000070449.5|Gpr50|ENSMUSG00000056380.7|G-protein-coupled receptor 50
mm10_v2_chr17_+_6430112_6430204	0.0377461	Brca1	ENSMUST00000179569.1|Dynlt1b|ENSMUSG00000096255.1|dynein light chain Tctex-type 1B
mm10_v2_chr17_+_8165501_8165540	0.0376293	Brca1	ENSMUST00000097419.3|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner 	ENSMUST00000024636.8|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner
mm10_v2_chr17_-_6948283_6948356	0.0374191	Brca1	ENSMUST00000024572.9|Rsph3b|ENSMUSG00000023806.9|radial spoke 3B homolog (Chlamydomonas)
mm10_v2_chrX_-_150589844_150589861	0.0367966	Brca1	ENSMUST00000112725.1|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2 	ENSMUST00000112720.1|Apex2|ENSMUSG00000025269.10|apurinic/apyrimidinic endonuclease 2
mm10_v2_chr12_+_87266696_87266760	0.0351505	Brca1	ENSMUST00000021425.6|Ahsa1|ENSMUSG00000021037.6|AHA1, activator of heat shock protein ATPase 1
mm10_v2_chr19_+_56287911_56287936	0.0341192	Brca1	ENSMUST00000095948.4|Habp2|ENSMUSG00000025075.8|hyaluronic acid binding protein 2
mm10_v2_chr13_+_100651328_100651397	0.0316205	Brca1	ENSMUST00000022135.8|Taf9|ENSMUSG00000078941.3|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor 	ENSMUST00000084721.6|Taf9|ENSMUSG00000052293.8|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr2_-_28916668_28916668	0.0307346	Brca1	ENSMUST00000113847.1|Barhl1|ENSMUSG00000026805.8|BarH-like 1 (Drosophila)
mm10_v2_chr3_-_95882031_95882074	0.0299278	Brca1	ENSMUST00000161994.1|Gm129|ENSMUSG00000038550.4|predicted gene 129
mm10_v2_chr1_+_172148015_172148048	0.0294241	Brca1	ENSMUST00000074144.5|Dcaf8|ENSMUSG00000026554.10|DDB1 and CUL4 associated factor 8
mm10_v2_chr19_+_57452900_57452926	0.0275661	Brca1	ENSMUST00000026073.6|Trub1|ENSMUSG00000025086.6|TruB pseudouridine (psi) synthase homolog 1 (E. coli) 	ENSMUST00000026072.3|Trub1|ENSMUSG00000025086.6|TruB pseudouridine (psi) synthase homolog 1 (E. coli)
mm10_v2_chr7_-_80947765_80947780	0.0261251	Brca1	ENSMUST00000026818.5|Sec11a|ENSMUSG00000025724.6|SEC11 homolog A (S. cerevisiae) 	ENSMUST00000117383.1|Sec11a|ENSMUSG00000025724.6|SEC11 homolog A (S. cerevisiae) 	ENSMUST00000119980.1|Sec11a|ENSMUSG00000025724.6|SEC11 homolog A (S. cerevisiae)
mm10_v2_chr5_+_138187485_138187521	0.0260514	Brca1	ENSMUST00000110934.2|Cnpy4|ENSMUSG00000036968.9|canopy 4 homolog (zebrafish)
mm10_v2_chr7_-_17027853_17027921	0.0253495	Brca1	ENSMUST00000003183.5|Ppp5c|ENSMUSG00000003099.5|protein phosphatase 5, catalytic subunit
mm10_v2_chr3_-_61365951_61365951	0.0252238	Brca1	ENSMUST00000066298.2|B430305J03Rik|ENSMUSG00000053706.2|RIKEN cDNA B430305J03 gene
mm10_v2_chr12_+_52097737_52097775	0.0249043	Brca1	ENSMUST00000040090.9|Nubpl|ENSMUSG00000035142.12|nucleotide binding protein-like
mm10_v2_chr6_+_115601907_115601940	0.0224596	Brca1	ENSMUST00000000449.7|Mkrn2|ENSMUSG00000000439.8|makorin, ring finger protein, 2
mm10_v2_chr12_+_83520436_83520466	0.0205266	Brca1	ENSMUST00000021645.7|Dcaf4|ENSMUSG00000021222.8|DDB1 and CUL4 associated factor 4
mm10_v2_chr19_+_36083696_36083736	0.0203932	Brca1	ENSMUST00000025714.7|Rpp30|ENSMUSG00000024800.7|ribonuclease P/MRP 30 subunit
mm10_v2_chr17_+_35841491_35841515	0.020052	Brca1	ENSMUST00000082337.6|Mdc1|ENSMUSG00000061607.8|mediator of DNA damage checkpoint 1
mm10_v2_chr15_-_34443508_34443640	0.0153624	Brca1	ENSMUST00000079735.5|Rpl30|ENSMUSG00000058600.7|ribosomal protein L30
mm10_v2_chr11_-_101171302_101171353	0.015066	Brca1	ENSMUST00000164474.1|Plekhh3|ENSMUSG00000035172.9|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 	ENSMUST00000043397.7|Plekhh3|ENSMUSG00000035172.9|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
mm10_v2_chr13_+_100651607_100651631	0.0135976	Brca1	ENSMUST00000167256.1|Taf9|ENSMUSG00000052293.8|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr6_-_108185552_108185587	0.013507	Brca1	ENSMUST00000167338.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000172188.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000032191.9|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1
mm10_v2_chr7_-_4996095_4996116	0.0128925	Brca1	ENSMUST00000108572.1|Zfp579|ENSMUSG00000051550.10|zinc finger protein 579
mm10_v2_chrX_+_42502533_42502562	0.0126856	Brca1	ENSMUST00000005839.4|Sh2d1a|ENSMUSG00000005696.5|SH2 domain protein 1A
mm10_v2_chr1_+_182124737_182124800	0.012585	Brca1	ENSMUST00000111018.1|Srp9|ENSMUSG00000026511.6|signal recognition particle 9 	ENSMUST00000027792.5|Srp9|ENSMUSG00000026511.6|signal recognition particle 9
mm10_v2_chr3_+_5218516_5218544	0.0111851	Brca1	ENSMUST00000175866.1|Zfhx4|ENSMUSG00000025255.12|zinc finger homeodomain 4
mm10_v2_chr7_-_17027807_17027846	0.00985665	Brca1	ENSMUST00000142597.1|Ppp5c|ENSMUSG00000003099.5|protein phosphatase 5, catalytic subunit
mm10_v2_chr10_-_128923948_128924035	0.00959799	Brca1	ENSMUST00000131271.1|Bloc1s1|ENSMUSG00000090247.1|biogenesis of lysosome-related organelles complex-1, subunit 1
mm10_v2_chr10_+_40570609_40570618	0.00817042	Brca1	ENSMUST00000019978.8|Slc22a16|ENSMUSG00000019834.9|solute carrier family 22 (organic cation transporter), member 16
mm10_v2_chr10_-_84440591_84440604	0.00746558	Brca1	ENSMUST00000020220.8|Nuak1|ENSMUSG00000020032.8|NUAK family, SNF1-like kinase, 1
mm10_v2_chr2_-_169962987_169963082	0.00731104	Brca1	ENSMUST00000087964.2|AY702102|ENSMUSG00000067581.2|cDNA sequence AY702102
mm10_v2_chr5_+_146832890_146832947	0.00724568	Brca1	ENSMUST00000035983.5|Rpl21|ENSMUSG00000041453.6|ribosomal protein L21
mm10_v2_chr5_+_72914264_72914304	0.00704507	Brca1	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr9_-_45204083_45204106	0.00436311	Brca1	ENSMUST00000034599.8|Tmprss4|ENSMUSG00000032091.8|transmembrane protease, serine 4
mm10_v2_chr17_+_33909481_33909576	0.00434949	Brca1	ENSMUST00000173626.1|Daxx|ENSMUSG00000002307.9|Fas death domain-associated protein 	ENSMUST00000174541.1|Daxx|ENSMUSG00000002307.9|Fas death domain-associated protein
mm10_v2_chr17_-_28350747_28350820	0.00423216	Brca1	ENSMUST00000080572.7|Tead3|ENSMUSG00000002249.11|TEA domain family member 3 	ENSMUST00000156862.1|Tead3|ENSMUSG00000002249.11|TEA domain family member 3
mm10_v2_chr8_-_107263248_107263248	0.00417404	Brca1	ENSMUST00000080443.6|Rps18-ps3|ENSMUSG00000057657.3|ribosomal protein S18, pseudogene 3
mm10_v2_chr19_-_10203880_10204169	0.00351652	Brca1	ENSMUST00000142241.1|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1 	ENSMUST00000116542.2|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1 	ENSMUST00000025651.5|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1 	ENSMUST00000156291.1|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1
mm10_v2_chr4_-_43669141_43669200	0.0033548	Brca1	ENSMUST00000056474.6|Fam221b|ENSMUSG00000043633.6|family with sequence similarity 221, member B
mm10_v2_chr14_-_63245219_63245271	0.000530655	Brca1	ENSMUST00000118022.1|Gata4|ENSMUSG00000021944.9|GATA binding protein 4 	ENSMUST00000067417.3|Gata4|ENSMUSG00000021944.9|GATA binding protein 4
mm10_v2_chr3_-_100489324_100489354	0.000140274	Brca1	ENSMUST00000061455.8|Fam46c|ENSMUSG00000044468.8|family with sequence similarity 46, member C
