mm10_v2_chr3_+_157534351_157534411	0.761029	AUGGCUU	ENSMUST00000029831.9|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2 	ENSMUST00000106057.1|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2 	ENSMUST00000106063.2|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2
mm10_v2_chr2_-_126876209_126876267	0.68772	AUGGCUU	ENSMUST00000103224.3|Trpm7|ENSMUSG00000027365.8|transient receptor potential cation channel, subfamily M, member 7
mm10_v2_chr16_-_45844303_45844381	0.630393	AUGGCUU	ENSMUST00000036355.6|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chr13_-_119790805_119790805	0.622113	AUGGCUU	ENSMUST00000178271.1|Zfp131|ENSMUSG00000094870.1|zinc finger protein 131 	ENSMUST00000177916.1|Zfp131|ENSMUSG00000094870.1|zinc finger protein 131
mm10_v2_chr13_-_3918157_3918220	0.605447	AUGGCUU	ENSMUST00000091853.4|Net1|ENSMUSG00000021215.8|neuroepithelial cell transforming gene 1
mm10_v2_chr19_+_40894692_40894736	0.592884	AUGGCUU	ENSMUST00000050092.6|Zfp518a|ENSMUSG00000049164.6|zinc finger protein 518A
mm10_v2_chr9_+_53537021_53537074	0.588555	AUGGCUU	ENSMUST00000035850.7|Npat|ENSMUSG00000033054.7|nuclear protein in the AT region
mm10_v2_chr2_-_72980402_72980471	0.575597	AUGGCUU	ENSMUST00000066003.6|Sp3|ENSMUSG00000027109.10|trans-acting transcription factor 3 	ENSMUST00000102689.3|Sp3|ENSMUSG00000027109.10|trans-acting transcription factor 3
mm10_v2_chr2_-_122702615_122702717	0.563641	AUGGCUU	ENSMUST00000005952.4|Slc30a4|ENSMUSG00000005802.6|solute carrier family 30 (zinc transporter), member 4 	ENSMUST00000099457.3|Slc30a4|ENSMUSG00000005802.6|solute carrier family 30 (zinc transporter), member 4
mm10_v2_chr19_+_29251748_29251854	0.54746	AUGGCUU	ENSMUST00000065796.3|Jak2|ENSMUSG00000024789.6|Janus kinase 2 	ENSMUST00000025705.6|Jak2|ENSMUSG00000024789.6|Janus kinase 2
mm10_v2_chr1_+_151755339_151755393	0.526838	AUGGCUU	ENSMUST00000059498.5|Edem3|ENSMUSG00000043019.6|ER degradation enhancer, mannosidase alpha-like 3
mm10_v2_chr3_+_41555723_41555745	0.525618	AUGGCUU	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr18_-_10181792_10181792	0.523447	AUGGCUU	ENSMUST00000067947.5|Rock1|ENSMUSG00000024290.8|Rho-associated coiled-coil containing protein kinase 1
mm10_v2_chr16_+_72663143_72663189	0.504873	AUGGCUU	ENSMUST00000023600.7|Robo1|ENSMUSG00000022883.10|roundabout homolog 1 (Drosophila)
mm10_v2_chr9_+_8544196_8544225	0.502062	AUGGCUU	ENSMUST00000050433.6|Trpc6|ENSMUSG00000031997.8|transient receptor potential cation channel, subfamily C, member 6
mm10_v2_chr14_-_49066653_49066674	0.499952	AUGGCUU	ENSMUST00000162175.1|Exoc5|ENSMUSG00000061244.7|exocyst complex component 5
mm10_v2_chr8_-_79711631_79711740	0.491632	AUGGCUU	ENSMUST00000080536.6|Abce1|ENSMUSG00000058355.6|ATP-binding cassette, sub-family E (OABP), member 1
mm10_v2_chr1_-_162740350_162740533	0.488023	AUGGCUU	ENSMUST00000182331.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000183011.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000182593.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000182149.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C
mm10_v2_chr9_+_59750876_59750918	0.454723	AUGGCUU	ENSMUST00000136740.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000135298.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000128341.1|Myo9a|ENSMUSG00000039585.9|myosin IXa
mm10_v2_chr3_+_153973436_153973520	0.453624	AUGGCUU	ENSMUST00000089948.5|Slc44a5|ENSMUSG00000028360.9|solute carrier family 44, member 5
mm10_v2_chr1_-_157412576_157412621	0.452275	AUGGCUU	ENSMUST00000078308.6|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2 	ENSMUST00000139470.1|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2
mm10_v2_chr8_+_76899772_76899828	0.447561	AUGGCUU	ENSMUST00000109913.2|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2
mm10_v2_chr12_+_16894894_16894978	0.426163	AUGGCUU	ENSMUST00000020904.6|Rock2|ENSMUSG00000020580.9|Rho-associated coiled-coil containing protein kinase 2
mm10_v2_chr17_+_88440711_88440741	0.42528	AUGGCUU	ENSMUST00000112238.2|Foxn2|ENSMUSG00000034998.12|forkhead box N2 	ENSMUST00000155640.1|Foxn2|ENSMUSG00000034998.12|forkhead box N2
mm10_v2_chr19_-_32712287_32712336	0.424716	AUGGCUU	ENSMUST00000070210.4|Atad1|ENSMUSG00000013662.5|ATPase family, AAA domain containing 1
mm10_v2_chr11_-_84870712_84870807	0.423598	AUGGCUU	ENSMUST00000170741.1|Ggnbp2|ENSMUSG00000020530.8|gametogenetin binding protein 2 	ENSMUST00000172405.1|Ggnbp2|ENSMUSG00000020530.8|gametogenetin binding protein 2 	ENSMUST00000100686.3|Ggnbp2|ENSMUSG00000020530.8|gametogenetin binding protein 2 	ENSMUST00000108081.2|Ggnbp2|ENSMUSG00000020530.8|gametogenetin binding protein 2
mm10_v2_chr18_+_7869159_7869209	0.415485	AUGGCUU	ENSMUST00000170932.1|Wac|ENSMUSG00000024283.8|WW domain containing adaptor with coiled-coil 	ENSMUST00000167020.1|Wac|ENSMUSG00000024283.8|WW domain containing adaptor with coiled-coil
mm10_v2_chr5_-_107875035_107875107	0.411329	AUGGCUU	ENSMUST00000138111.1|Evi5|ENSMUSG00000011831.10|ecotropic viral integration site 5 	ENSMUST00000112642.1|Evi5|ENSMUSG00000011831.10|ecotropic viral integration site 5
mm10_v2_chr16_-_64786321_64786321	0.399342	AUGGCUU	ENSMUST00000052588.4|Zfp654|ENSMUSG00000047141.4|zinc finger protein 654
mm10_v2_chr18_-_46280820_46280850	0.398546	AUGGCUU	ENSMUST00000025354.3|Pggt1b|ENSMUSG00000024477.3|protein geranylgeranyltransferase type I, beta subunit
mm10_v2_chr8_-_60983215_60983319	0.397041	AUGGCUU	ENSMUST00000004430.7|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000110301.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000093490.2|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr12_+_73901370_73901391	0.390576	AUGGCUU	ENSMUST00000110461.1|Hif1a|ENSMUSG00000021109.7|hypoxia inducible factor 1, alpha subunit
mm10_v2_chr2_+_75659253_75659318	0.379957	AUGGCUU	ENSMUST00000111964.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000111962.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000111961.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000164947.2|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000090792.4|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3
mm10_v2_chr14_+_34673888_34673930	0.373438	AUGGCUU	ENSMUST00000048263.7|Wapal|ENSMUSG00000041408.10|wings apart-like homolog (Drosophila)
mm10_v2_chr3_+_106547693_106547888	0.372039	AUGGCUU	ENSMUST00000117469.1|Dram2|ENSMUSG00000027900.9|DNA-damage regulated autophagy modulator 2 	ENSMUST00000067630.6|Dram2|ENSMUSG00000027900.9|DNA-damage regulated autophagy modulator 2 	ENSMUST00000134396.1|Dram2|ENSMUSG00000027900.9|DNA-damage regulated autophagy modulator 2 	ENSMUST00000144746.1|Dram2|ENSMUSG00000027900.9|DNA-damage regulated autophagy modulator 2 	ENSMUST00000121034.1|Dram2|ENSMUSG00000027900.9|DNA-damage regulated autophagy modulator 2 	ENSMUST00000029507.6|Dram2|ENSMUSG00000027900.9|DNA-damage regulated autophagy modulator 2 	ENSMUST00000132923.1|Dram2|ENSMUSG00000027900.9|DNA-damage regulated autophagy modulator 2 	ENSMUST00000151465.1|Dram2|ENSMUSG00000027900.9|DNA-damage regulated autophagy modulator 2
mm10_v2_chr14_+_47276910_47276936	0.368726	AUGGCUU	ENSMUST00000065562.4|Socs4|ENSMUSG00000048379.8|suppressor of cytokine signaling 4
mm10_v2_chr19_+_36926071_36926177	0.365286	AUGGCUU	ENSMUST00000099494.3|Btaf1|ENSMUSG00000040565.7|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)
mm10_v2_chr13_+_54371340_54371352	0.36057	AUGGCUU	ENSMUST00000026985.8|Cplx2|ENSMUSG00000025867.8|complexin 2
mm10_v2_chr5_+_138085083_138085147	0.35346	AUGGCUU	ENSMUST00000019660.4|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1 	ENSMUST00000066617.5|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1 	ENSMUST00000110963.1|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1
mm10_v2_chr11_-_86357570_86357614	0.350139	AUGGCUU	ENSMUST00000043624.8|Med13|ENSMUSG00000034297.8|mediator complex subunit 13
mm10_v2_chr16_+_38089001_38089064	0.350117	AUGGCUU	ENSMUST00000023507.6|Gsk3b|ENSMUSG00000022812.7|glycogen synthase kinase 3 beta
mm10_v2_chr16_+_87698904_87698959	0.349579	AUGGCUU	ENSMUST00000026703.5|Bach1|ENSMUSG00000025612.5|BTB and CNC homology 1
mm10_v2_chr5_-_72559599_72559691	0.346368	AUGGCUU	ENSMUST00000074948.4|Nfxl1|ENSMUSG00000072889.3|nuclear transcription factor, X-box binding-like 1 	ENSMUST00000087216.5|Nfxl1|ENSMUSG00000072889.3|nuclear transcription factor, X-box binding-like 1
mm10_v2_chr13_+_41249841_41249863	0.34035	AUGGCUU	ENSMUST00000165561.2|Smim13|ENSMUSG00000091264.2|small integral membrane protein 13
mm10_v2_chr3_-_59344256_59344367	0.336085	AUGGCUU	ENSMUST00000039419.6|Igsf10|ENSMUSG00000036334.7|immunoglobulin superfamily, member 10
mm10_v2_chr5_-_124327883_124327972	0.335383	AUGGCUU	ENSMUST00000031344.6|Mphosph9|ENSMUSG00000038126.11|M-phase phosphoprotein 9
mm10_v2_chr2_-_70825726_70825820	0.333684	AUGGCUU	ENSMUST00000038584.8|Tlk1|ENSMUSG00000041997.10|tousled-like kinase 1
mm10_v2_chr4_-_34882919_34882964	0.333562	AUGGCUU	ENSMUST00000098163.2|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292 	ENSMUST00000047950.5|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292
mm10_v2_chr16_-_43979050_43979093	0.32987	AUGGCUU	ENSMUST00000165648.1|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23 	ENSMUST00000036321.7|Zdhhc23|ENSMUSG00000036304.7|zinc finger, DHHC domain containing 23
mm10_v2_chr7_-_67372846_67372858	0.328663	AUGGCUU	ENSMUST00000156690.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000107476.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000076325.5|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000032776.8|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000133074.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A
mm10_v2_chr5_+_13399309_13399382	0.323161	AUGGCUU	ENSMUST00000030714.7|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 	ENSMUST00000141968.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr6_-_18514802_18514869	0.316442	AUGGCUU	ENSMUST00000090601.5|Cttnbp2|ENSMUSG00000000416.10|cortactin binding protein 2
mm10_v2_chr1_-_176807124_176807124	0.315978	AUGGCUU	ENSMUST00000057037.7|Cep170|ENSMUSG00000057335.6|centrosomal protein 170
mm10_v2_chr1_-_105356658_105356714	0.309	AUGGCUU	ENSMUST00000058688.5|Rnf152|ENSMUSG00000047496.5|ring finger protein 152 	ENSMUST00000172299.1|Rnf152|ENSMUSG00000047496.5|ring finger protein 152
mm10_v2_chrX_+_13280970_13281031	0.304942	AUGGCUU	ENSMUST00000000804.6|Ddx3x|ENSMUSG00000000787.6|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm10_v2_chr7_-_131410495_131410521	0.304035	AUGGCUU	ENSMUST00000121033.1|Ikzf5|ENSMUSG00000040167.9|IKAROS family zinc finger 5 	ENSMUST00000046306.8|Ikzf5|ENSMUSG00000040167.9|IKAROS family zinc finger 5
mm10_v2_chr1_+_191717834_191717904	0.301776	AUGGCUU	ENSMUST00000110855.1|Lpgat1|ENSMUSG00000026623.10|lysophosphatidylglycerol acyltransferase 1 	ENSMUST00000133076.1|Lpgat1|ENSMUSG00000026623.10|lysophosphatidylglycerol acyltransferase 1
mm10_v2_chr2_-_37647199_37647285	0.299101	AUGGCUU	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr15_+_34082664_34082734	0.29837	AUGGCUU	ENSMUST00000022865.9|Mtdh|ENSMUSG00000022255.9|metadherin
mm10_v2_chr4_-_105109829_105109913	0.297223	AUGGCUU	ENSMUST00000030243.7|Prkaa2|ENSMUSG00000028518.8|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm10_v2_chr15_+_44619551_44619641	0.29557	AUGGCUU	ENSMUST00000022964.7|Ebag9|ENSMUSG00000022339.8|estrogen receptor-binding fragment-associated gene 9
mm10_v2_chr17_-_25015230_25015230	0.294169	AUGGCUU	ENSMUST00000073337.6|Cramp1l|ENSMUSG00000038002.8|Crm, cramped-like (Drosophila)
mm10_v2_chr9_-_70141484_70141578	0.291963	AUGGCUU	ENSMUST00000034749.8|Fam81a|ENSMUSG00000032224.8|family with sequence similarity 81, member A
mm10_v2_chr10_+_34483400_34483445	0.291849	AUGGCUU	ENSMUST00000019913.7|Frk|ENSMUSG00000019779.8|fyn-related kinase 	ENSMUST00000170771.1|Frk|ENSMUSG00000019779.8|fyn-related kinase
mm10_v2_chr5_-_20951769_20951824	0.286041	AUGGCUU	ENSMUST00000036489.5|Rsbn1l|ENSMUSG00000039968.5|round spermatid basic protein 1-like
mm10_v2_chr14_+_17660956_17660963	0.281634	AUGGCUU	ENSMUST00000022303.7|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta 	ENSMUST00000091471.4|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta
mm10_v2_chr2_-_77519565_77519647	0.28025	AUGGCUU	ENSMUST00000111830.2|Zfp385b|ENSMUSG00000027016.11|zinc finger protein 385B
mm10_v2_chr1_+_132007606_132007634	0.280052	AUGGCUU	ENSMUST00000086556.5|Elk4|ENSMUSG00000026436.9|ELK4, member of ETS oncogene family
mm10_v2_chr10_+_83543941_83544007	0.27901	AUGGCUU	ENSMUST00000038388.5|A230046K03Rik|ENSMUSG00000034560.5|RIKEN cDNA A230046K03 gene
mm10_v2_chr9_-_36726374_36726658	0.278571	AUGGCUU	ENSMUST00000172702.2|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1 	ENSMUST00000172742.1|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1 	ENSMUST00000034625.5|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1
mm10_v2_chr16_+_27388869_27388980	0.272521	AUGGCUU	ENSMUST00000100026.3|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000039443.7|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000096127.4|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50
mm10_v2_chr10_+_111164794_111164811	0.272504	AUGGCUU	ENSMUST00000105275.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8 	ENSMUST00000095310.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8
mm10_v2_chr2_+_83812567_83812643	0.271925	AUGGCUU	ENSMUST00000051454.3|Fam171b|ENSMUSG00000048388.3|family with sequence similarity 171, member B
mm10_v2_chr2_-_53191214_53191284	0.269593	AUGGCUU	ENSMUST00000076313.6|Prpf40a|ENSMUSG00000061136.7|PRP40 pre-mRNA processing factor 40 homolog A (yeast) 	ENSMUST00000125243.1|Prpf40a|ENSMUSG00000061136.7|PRP40 pre-mRNA processing factor 40 homolog A (yeast)
mm10_v2_chr9_+_101074727_101074727	0.267717	AUGGCUU	ENSMUST00000085177.3|Msl2|ENSMUSG00000066415.3|male-specific lethal 2 homolog (Drosophila)
mm10_v2_chr11_+_95414078_95414243	0.266134	AUGGCUU	ENSMUST00000107724.2|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000150884.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000107722.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000127713.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein
mm10_v2_chr2_-_167188787_167188815	0.264818	AUGGCUU	ENSMUST00000059826.8|Kcnb1|ENSMUSG00000050556.8|potassium voltage gated channel, Shab-related subfamily, member 1
mm10_v2_chr14_+_21499770_21499883	0.252775	AUGGCUU	ENSMUST00000182855.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000069648.7|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000182405.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B
mm10_v2_chr4_-_70534904_70534987	0.252619	AUGGCUU	ENSMUST00000107359.2|Megf9|ENSMUSG00000039270.3|multiple EGF-like-domains 9
mm10_v2_chr19_-_32388462_32388512	0.249284	AUGGCUU	ENSMUST00000099514.3|Sgms1|ENSMUSG00000040451.11|sphingomyelin synthase 1
mm10_v2_chr1_-_143702832_143702893	0.243367	AUGGCUU	ENSMUST00000018337.7|Cdc73|ENSMUSG00000026361.7|cell division cycle 73, Paf1/RNA polymerase II complex component
mm10_v2_chr4_-_9643638_9643717	0.235554	AUGGCUU	ENSMUST00000108333.1|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000108334.1|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000108335.1|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000152526.1|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000103004.3|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase
mm10_v2_chr17_+_64600702_64600739	0.230149	AUGGCUU	ENSMUST00000086723.3|Man2a1|ENSMUSG00000024085.7|mannosidase 2, alpha 1
mm10_v2_chr13_-_98815408_98815449	0.230035	AUGGCUU	ENSMUST00000040340.8|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000099277.4|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000179563.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2 	ENSMUST00000109403.1|Fcho2|ENSMUSG00000041685.9|FCH domain only 2
mm10_v2_chr6_-_35539765_35539888	0.227039	AUGGCUU	ENSMUST00000031866.5|Mtpn|ENSMUSG00000029840.5|myotrophin
mm10_v2_chr13_+_83504032_83504050	0.225757	AUGGCUU	ENSMUST00000163888.1|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C 	ENSMUST00000005722.7|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C
mm10_v2_chr17_+_14943184_14943281	0.22384	AUGGCUU	ENSMUST00000052691.8|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene 	ENSMUST00000164837.2|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene 	ENSMUST00000174004.1|1600012H06Rik|ENSMUSG00000050088.9|RIKEN cDNA 1600012H06 gene
mm10_v2_chr13_+_47043499_47043591	0.223359	AUGGCUU	ENSMUST00000037025.8|Kdm1b|ENSMUSG00000038080.10|lysine (K)-specific demethylase 1B 	ENSMUST00000143868.1|Kdm1b|ENSMUSG00000038080.10|lysine (K)-specific demethylase 1B
mm10_v2_chr11_+_35769462_35769484	0.222934	AUGGCUU	ENSMUST00000018990.7|Pank3|ENSMUSG00000018846.8|pantothenate kinase 3
mm10_v2_chr6_-_13608011_13608100	0.222261	AUGGCUU	ENSMUST00000031554.2|Tmem168|ENSMUSG00000029569.3|transmembrane protein 168
mm10_v2_chr6_-_148212374_148212391	0.220081	AUGGCUU	ENSMUST00000136008.1|Ergic2|ENSMUSG00000030304.5|ERGIC and golgi 2 	ENSMUST00000032447.4|Ergic2|ENSMUSG00000030304.5|ERGIC and golgi 2
mm10_v2_chr5_-_143180721_143180795	0.219173	AUGGCUU	ENSMUST00000164068.1|Rbak|ENSMUSG00000061898.4|RB-associated KRAB repressor 	ENSMUST00000049861.4|Rbak|ENSMUSG00000061898.4|RB-associated KRAB repressor 	ENSMUST00000165318.1|Rbak|ENSMUSG00000061898.4|RB-associated KRAB repressor
mm10_v2_chr12_-_64965496_64965538	0.218843	AUGGCUU	ENSMUST00000021331.7|Klhl28|ENSMUSG00000020948.8|kelch-like 28
mm10_v2_chr2_+_75832168_75832194	0.217943	AUGGCUU	ENSMUST00000047232.7|Agps|ENSMUSG00000042410.9|alkylglycerone phosphate synthase 	ENSMUST00000111952.2|Agps|ENSMUSG00000042410.9|alkylglycerone phosphate synthase
mm10_v2_chr4_+_57637816_57637846	0.21418	AUGGCUU	ENSMUST00000150412.1|Gm20459|ENSMUSG00000089945.4|predicted gene 20459
mm10_v2_chr8_-_41133697_41133755	0.206464	AUGGCUU	ENSMUST00000155055.1|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1 	ENSMUST00000059115.6|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1 	ENSMUST00000145860.1|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1
mm10_v2_chr3_-_84304762_84304809	0.205744	AUGGCUU	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr13_+_104178797_104178872	0.205351	AUGGCUU	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chr7_+_97579868_97579901	0.204941	AUGGCUU	ENSMUST00000042399.7|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1 	ENSMUST00000107153.1|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1
mm10_v2_chr6_-_39206782_39206831	0.203606	AUGGCUU	ENSMUST00000002305.8|Jhdm1d|ENSMUSG00000042599.8|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm10_v2_chr14_-_61439831_61439947	0.200966	AUGGCUU	ENSMUST00000022496.7|Kpna3|ENSMUSG00000021929.8|karyopherin (importin) alpha 3
mm10_v2_chr19_+_16956110_16956124	0.199707	AUGGCUU	ENSMUST00000087689.4|Prune2|ENSMUSG00000039126.9|prune homolog 2 (Drosophila)
mm10_v2_chr11_-_109473598_109473666	0.199278	AUGGCUU	ENSMUST00000070152.5|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr3_-_51560816_51560878	0.195075	AUGGCUU	ENSMUST00000037141.7|Setd7|ENSMUSG00000037111.8|SET domain containing (lysine methyltransferase) 7
mm10_v2_chr3_-_56183678_56183701	0.1949	AUGGCUU	ENSMUST00000029374.6|Nbea|ENSMUSG00000027799.8|neurobeachin
mm10_v2_chr1_-_21961581_21961581	0.194433	AUGGCUU	ENSMUST00000029667.6|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173058.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173404.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5
mm10_v2_chrX_-_57338598_57338729	0.191696	AUGGCUU	ENSMUST00000033468.4|Arhgef6|ENSMUSG00000031133.6|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 	ENSMUST00000114736.1|Arhgef6|ENSMUSG00000031133.6|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
mm10_v2_chr4_-_40269778_40269850	0.191536	AUGGCUU	ENSMUST00000042575.6|Topors|ENSMUSG00000036822.6|topoisomerase I binding, arginine/serine-rich
mm10_v2_chr1_+_34801704_34801776	0.18907	AUGGCUU	ENSMUST00000047664.9|Arhgef4|ENSMUSG00000037509.12|Rho guanine nucleotide exchange factor (GEF) 4
mm10_v2_chr7_-_38019505_38019552	0.188856	AUGGCUU	ENSMUST00000085513.4|Uri1|ENSMUSG00000030421.8|URI1, prefoldin-like chaperone
mm10_v2_chr13_-_41220395_41220412	0.185614	AUGGCUU	ENSMUST00000021793.7|Elovl2|ENSMUSG00000021364.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
mm10_v2_chr2_-_136387929_136387985	0.184695	AUGGCUU	ENSMUST00000035264.2|Pak7|ENSMUSG00000039913.6|p21 protein (Cdc42/Rac)-activated kinase 7 	ENSMUST00000077200.3|Pak7|ENSMUSG00000039913.6|p21 protein (Cdc42/Rac)-activated kinase 7
mm10_v2_chr17_-_81649607_81649607	0.184223	AUGGCUU	ENSMUST00000163680.2|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000086538.3|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENSMUST00000163123.1|Slc8a1|ENSMUSG00000054640.8|solute carrier family 8 (sodium/calcium exchanger), member 1
mm10_v2_chr3_-_133544390_133544412	0.179355	AUGGCUU	ENSMUST00000098603.3|Tet2|ENSMUSG00000040943.8|tet methylcytosine dioxygenase 2
mm10_v2_chr3_+_51415986_51416044	0.178148	AUGGCUU	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr2_+_156196642_156196775	0.176797	AUGGCUU	ENSMUST00000037401.8|Phf20|ENSMUSG00000038116.10|PHD finger protein 20
mm10_v2_chr4_+_57845240_57845265	0.174467	AUGGCUU	ENSMUST00000102903.1|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2 	ENSMUST00000107598.3|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2
mm10_v2_chr10_-_121586730_121586803	0.172539	AUGGCUU	ENSMUST00000020316.2|Tbk1|ENSMUSG00000020115.2|TANK-binding kinase 1
mm10_v2_chr8_+_35587780_35587825	0.171949	AUGGCUU	ENSMUST00000037666.5|Mfhas1|ENSMUSG00000070056.5|malignant fibrous histiocytoma amplified sequence 1
mm10_v2_chr1_+_59764264_59764286	0.171576	AUGGCUU	ENSMUST00000087435.5|Bmpr2|ENSMUSG00000067336.5|bone morphogenetic protein receptor, type II (serine/threonine kinase)
mm10_v2_chr3_-_107696462_107696574	0.170374	AUGGCUU	ENSMUST00000029490.8|Ahcyl1|ENSMUSG00000027893.8|S-adenosylhomocysteine hydrolase-like 1
mm10_v2_chr14_+_120478443_120478510	0.169517	AUGGCUU	ENSMUST00000062117.6|Rap2a|ENSMUSG00000051615.7|RAS related protein 2a
mm10_v2_chr15_+_9140527_9140621	0.164545	AUGGCUU	ENSMUST00000090380.4|Lmbrd2|ENSMUSG00000039704.6|LMBR1 domain containing 2
mm10_v2_chr11_-_94321957_94321988	0.163974	AUGGCUU	ENSMUST00000166312.1|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae) 	ENSMUST00000107821.2|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae) 	ENSMUST00000021226.7|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae) 	ENSMUST00000107820.1|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae)
mm10_v2_chr19_+_36554661_36554688	0.163714	AUGGCUU	ENSMUST00000169036.2|Hectd2|ENSMUSG00000041180.7|HECT domain containing 2 	ENSMUST00000047247.5|Hectd2|ENSMUSG00000041180.7|HECT domain containing 2
mm10_v2_chr13_+_9276477_9276620	0.160123	AUGGCUU	ENSMUST00000174552.1|Dip2c|ENSMUSG00000048264.9|DIP2 disco-interacting protein 2 homolog C (Drosophila)
mm10_v2_chr12_-_84970814_84970900	0.159396	AUGGCUU	ENSMUST00000165886.1|Arel1|ENSMUSG00000042350.7|apoptosis resistant E3 ubiquitin protein ligase 1 	ENSMUST00000167448.1|Arel1|ENSMUSG00000042350.7|apoptosis resistant E3 ubiquitin protein ligase 1 	ENSMUST00000043169.7|Arel1|ENSMUSG00000042350.7|apoptosis resistant E3 ubiquitin protein ligase 1
mm10_v2_chr11_-_5381734_5381745	0.158536	AUGGCUU	ENSMUST00000172492.1|Znrf3|ENSMUSG00000041961.8|zinc and ring finger 3
mm10_v2_chr9_+_96119362_96119437	0.157977	AUGGCUU	ENSMUST00000085217.5|Gk5|ENSMUSG00000041440.12|glycerol kinase 5 (putative) 	ENSMUST00000122383.1|Gk5|ENSMUSG00000041440.12|glycerol kinase 5 (putative)
mm10_v2_chr5_-_44799643_44799707	0.157502	AUGGCUU	ENSMUST00000070748.5|Ldb2|ENSMUSG00000039706.7|LIM domain binding 2
mm10_v2_chr9_-_100546053_100546092	0.157064	AUGGCUU	ENSMUST00000116522.1|Nck1|ENSMUSG00000032475.9|non-catalytic region of tyrosine kinase adaptor protein 1
mm10_v2_chr14_-_46822232_46822266	0.156137	AUGGCUU	ENSMUST00000111817.1|Gmfb|ENSMUSG00000062014.6|glia maturation factor, beta 	ENSMUST00000079314.5|Gmfb|ENSMUSG00000062014.6|glia maturation factor, beta
mm10_v2_chr10_+_69533761_69533776	0.155487	AUGGCUU	ENSMUST00000182884.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr15_+_102406143_102406380	0.154801	AUGGCUU	ENSMUST00000170884.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000165924.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000163709.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000001326.6|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr17_-_10319324_10319380	0.15294	AUGGCUU	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr6_+_38551334_38551493	0.151115	AUGGCUU	ENSMUST00000163047.1|Luc7l2|ENSMUSG00000029823.10|LUC7-like 2 (S. cerevisiae) 	ENSMUST00000161538.1|Luc7l2|ENSMUSG00000029823.10|LUC7-like 2 (S. cerevisiae) 	ENSMUST00000057692.4|Luc7l2|ENSMUSG00000029823.10|LUC7-like 2 (S. cerevisiae)
mm10_v2_chr11_+_21091291_21091339	0.15075	AUGGCUU	ENSMUST00000093290.5|Peli1|ENSMUSG00000020134.7|pellino 1
mm10_v2_chr19_+_29522263_29522341	0.150504	AUGGCUU	ENSMUST00000043610.6|C030046E11Rik|ENSMUSG00000038658.9|RIKEN cDNA C030046E11 gene 	ENSMUST00000162184.1|C030046E11Rik|ENSMUSG00000038658.9|RIKEN cDNA C030046E11 gene
mm10_v2_chr15_-_59082026_59082090	0.14991	AUGGCUU	ENSMUST00000080371.6|Mtss1|ENSMUSG00000022353.9|metastasis suppressor 1
mm10_v2_chr3_+_126596951_126596986	0.1494	AUGGCUU	ENSMUST00000106402.1|Camk2d|ENSMUSG00000053819.10|calcium/calmodulin-dependent protein kinase II, delta
mm10_v2_chr7_-_109493627_109493738	0.145998	AUGGCUU	ENSMUST00000106739.1|Trim66|ENSMUSG00000031026.8|tripartite motif-containing 66
mm10_v2_chr11_-_86544754_86544805	0.145803	AUGGCUU	ENSMUST00000138810.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000058286.2|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000154617.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1
mm10_v2_chr10_-_20725023_20725078	0.14524	AUGGCUU	ENSMUST00000020165.7|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr13_-_46727932_46728005	0.145161	AUGGCUU	ENSMUST00000021803.9|Nup153|ENSMUSG00000021374.9|nucleoporin 153
mm10_v2_chr1_-_133753681_133753857	0.144679	AUGGCUU	ENSMUST00000125659.1|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000165602.2|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4 	ENSMUST00000048953.7|Atp2b4|ENSMUSG00000026463.11|ATPase, Ca++ transporting, plasma membrane 4
mm10_v2_chr5_+_88720855_88720876	0.144593	AUGGCUU	ENSMUST00000113229.1|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B 	ENSMUST00000006424.7|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B
mm10_v2_chr5_+_73491026_73491110	0.142301	AUGGCUU	ENSMUST00000063882.5|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) 	ENSMUST00000113558.1|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
mm10_v2_chr6_-_100287441_100287465	0.140337	AUGGCUU	ENSMUST00000101118.2|Rybp|ENSMUSG00000072872.2|RING1 and YY1 binding protein
mm10_v2_chr2_+_174643534_174643534	0.136805	AUGGCUU	ENSMUST00000059452.5|Zfp831|ENSMUSG00000050600.5|zinc finger protein 831
mm10_v2_chr3_+_60501252_60501275	0.13585	AUGGCUU	ENSMUST00000099087.2|Mbnl1|ENSMUSG00000027763.8|muscleblind-like 1 (Drosophila)
mm10_v2_chr1_-_13372434_13372457	0.135472	AUGGCUU	ENSMUST00000081713.4|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr10_+_56377300_56377338	0.134763	AUGGCUU	ENSMUST00000068581.7|Gja1|ENSMUSG00000050953.9|gap junction protein, alpha 1
mm10_v2_chr3_-_10331358_10331439	0.133585	AUGGCUU	ENSMUST00000065938.8|Impa1|ENSMUSG00000027531.10|inositol (myo)-1(or 4)-monophosphatase 1 	ENSMUST00000118410.1|Impa1|ENSMUSG00000027531.10|inositol (myo)-1(or 4)-monophosphatase 1
mm10_v2_chr18_-_79109391_79109510	0.133575	AUGGCUU	ENSMUST00000025430.8|Setbp1|ENSMUSG00000024548.9|SET binding protein 1 	ENSMUST00000161465.2|Setbp1|ENSMUSG00000024548.9|SET binding protein 1
mm10_v2_chr9_-_106158109_106158138	0.130829	AUGGCUU	ENSMUST00000159809.1|Glyctk|ENSMUSG00000020258.9|glycerate kinase 	ENSMUST00000162562.1|Glyctk|ENSMUSG00000020258.9|glycerate kinase 	ENSMUST00000036382.6|Glyctk|ENSMUSG00000020258.9|glycerate kinase 	ENSMUST00000112543.2|Glyctk|ENSMUSG00000020258.9|glycerate kinase
mm10_v2_chr8_-_86745950_86746054	0.130383	AUGGCUU	ENSMUST00000045296.4|Siah1a|ENSMUSG00000036840.4|seven in absentia 1A
mm10_v2_chr15_-_28025834_28025879	0.126333	AUGGCUU	ENSMUST00000090247.5|Trio|ENSMUSG00000022263.9|triple functional domain (PTPRF interacting)
mm10_v2_chr2_-_80128834_80128996	0.126096	AUGGCUU	ENSMUST00000102654.4|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent 	ENSMUST00000102655.3|Pde1a|ENSMUSG00000059173.13|phosphodiesterase 1A, calmodulin-dependent
mm10_v2_chr14_-_78725089_78725089	0.125163	AUGGCUU	ENSMUST00000074729.5|Dgkh|ENSMUSG00000034731.9|diacylglycerol kinase, eta
mm10_v2_chr18_-_20896078_20896078	0.124266	AUGGCUU	ENSMUST00000025177.6|Trappc8|ENSMUSG00000033382.7|trafficking protein particle complex 8 	ENSMUST00000097658.1|Trappc8|ENSMUSG00000033382.7|trafficking protein particle complex 8
mm10_v2_chr7_+_66109474_66109515	0.123672	AUGGCUU	ENSMUST00000036372.6|Chsy1|ENSMUSG00000032640.9|chondroitin sulfate synthase 1
mm10_v2_chrX_+_169036610_169036672	0.1229	AUGGCUU	ENSMUST00000087016.4|Arhgap6|ENSMUSG00000031355.10|Rho GTPase activating protein 6 	ENSMUST00000112129.1|Arhgap6|ENSMUSG00000031355.10|Rho GTPase activating protein 6 	ENSMUST00000112131.2|Arhgap6|ENSMUSG00000031355.10|Rho GTPase activating protein 6
mm10_v2_chr11_-_106612928_106612973	0.120422	AUGGCUU	ENSMUST00000042780.7|Tex2|ENSMUSG00000040548.9|testis expressed gene 2
mm10_v2_chr3_+_88616133_88616151	0.118381	AUGGCUU	ENSMUST00000176500.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2 	ENSMUST00000177498.1|Arhgef2|ENSMUSG00000028059.8|rho/rac guanine nucleotide exchange factor (GEF) 2
mm10_v2_chr5_-_4758216_4758216	0.118106	AUGGCUU	ENSMUST00000054294.4|Fzd1|ENSMUSG00000044674.4|frizzled homolog 1 (Drosophila)
mm10_v2_chr10_-_120899067_120899101	0.118038	AUGGCUU	ENSMUST00000092143.5|Msrb3|ENSMUSG00000051236.7|methionine sulfoxide reductase B3
mm10_v2_chr9_+_62858085_62858138	0.115356	AUGGCUU	ENSMUST00000034777.6|Calml4|ENSMUSG00000032246.7|calmodulin-like 4 	ENSMUST00000163820.1|Calml4|ENSMUSG00000032246.7|calmodulin-like 4
mm10_v2_chr16_+_33062512_33062549	0.115348	AUGGCUU	ENSMUST00000023497.2|Lmln|ENSMUSG00000022802.2|leishmanolysin-like (metallopeptidase M8 family)
mm10_v2_chr16_-_50432340_50432409	0.113294	AUGGCUU	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr11_-_69801716_69801857	0.113185	AUGGCUU	ENSMUST00000011285.4|Fgf11|ENSMUSG00000042826.7|fibroblast growth factor 11 	ENSMUST00000102585.1|Fgf11|ENSMUSG00000042826.7|fibroblast growth factor 11
mm10_v2_chr3_+_116007457_116007540	0.112759	AUGGCUU	ENSMUST00000029575.5|Extl2|ENSMUSG00000027963.8|exostoses (multiple)-like 2 	ENSMUST00000106501.1|Extl2|ENSMUSG00000027963.8|exostoses (multiple)-like 2
mm10_v2_chr4_+_47353222_47353265	0.112263	AUGGCUU	ENSMUST00000007757.8|Tgfbr1|ENSMUSG00000007613.9|transforming growth factor, beta receptor I
mm10_v2_chr3_-_119783262_119783388	0.111322	AUGGCUU	ENSMUST00000029780.7|Ptbp2|ENSMUSG00000028134.7|polypyrimidine tract binding protein 2
mm10_v2_chrX_+_166238901_166238914	0.110208	AUGGCUU	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr12_+_76370266_76370266	0.109183	AUGGCUU	ENSMUST00000042779.3|Zbtb1|ENSMUSG00000033454.6|zinc finger and BTB domain containing 1
mm10_v2_chr8_-_8660773_8660773	0.108884	AUGGCUU	ENSMUST00000001319.7|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr19_+_44931119_44931172	0.106727	AUGGCUU	ENSMUST00000096053.3|Fam178a|ENSMUSG00000036097.7|family with sequence similarity 178, member A
mm10_v2_chr6_-_83441674_83441684	0.106023	AUGGCUU	ENSMUST00000089622.4|Tet3|ENSMUSG00000034832.9|tet methylcytosine dioxygenase 3
mm10_v2_chr10_-_54075730_54075796	0.105563	AUGGCUU	ENSMUST00000105469.1|Man1a|ENSMUSG00000003746.9|mannosidase 1, alpha 	ENSMUST00000003843.8|Man1a|ENSMUSG00000003746.9|mannosidase 1, alpha
mm10_v2_chr8_-_36249292_36249516	0.104812	AUGGCUU	ENSMUST00000065297.5|Lonrf1|ENSMUSG00000039633.6|LON peptidase N-terminal domain and ring finger 1
mm10_v2_chr9_+_45838572_45838592	0.104436	AUGGCUU	ENSMUST00000078111.4|Bace1|ENSMUSG00000032086.6|beta-site APP cleaving enzyme 1 	ENSMUST00000034591.4|Bace1|ENSMUSG00000032086.6|beta-site APP cleaving enzyme 1
mm10_v2_chr3_+_16183177_16183206	0.104137	AUGGCUU	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr4_+_21931291_21931366	0.103203	AUGGCUU	ENSMUST00000029908.7|Faxc|ENSMUSG00000028246.7|failed axon connections homolog (Drosophila)
mm10_v2_chr14_-_45530118_45530182	0.10291	AUGGCUU	ENSMUST00000045905.6|Fermt2|ENSMUSG00000037712.9|fermitin family homolog 2 (Drosophila)
mm10_v2_chr1_+_82586942_82586988	0.102552	AUGGCUU	ENSMUST00000113457.2|Col4a3|ENSMUSG00000079465.2|collagen, type IV, alpha 3
mm10_v2_chr6_+_117168535_117168584	0.0994197	AUGGCUU	ENSMUST00000112866.1|Cxcl12|ENSMUSG00000061353.5|chemokine (C-X-C motif) ligand 12 	ENSMUST00000112871.1|Cxcl12|ENSMUSG00000061353.5|chemokine (C-X-C motif) ligand 12 	ENSMUST00000073043.4|Cxcl12|ENSMUSG00000061353.5|chemokine (C-X-C motif) ligand 12
mm10_v2_chr3_+_30792876_30792876	0.0992586	AUGGCUU	ENSMUST00000029256.7|Sec62|ENSMUSG00000027706.7|SEC62 homolog (S. cerevisiae)
mm10_v2_chr4_-_55532453_55532485	0.0988685	AUGGCUU	ENSMUST00000132746.1|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut) 	ENSMUST00000107619.2|Klf4|ENSMUSG00000003032.8|Kruppel-like factor 4 (gut)
mm10_v2_chr14_-_110755100_110755152	0.0986914	AUGGCUU	ENSMUST00000078386.2|Slitrk6|ENSMUSG00000045871.4|SLIT and NTRK-like family, member 6
mm10_v2_chr1_+_134709293_134709318	0.098282	AUGGCUU	ENSMUST00000121990.1|Syt2|ENSMUSG00000026452.9|synaptotagmin II
mm10_v2_chr8_+_106935720_106935776	0.0966091	AUGGCUU	ENSMUST00000047425.3|Sntb2|ENSMUSG00000041308.5|syntrophin, basic 2
mm10_v2_chr1_-_156939626_156939657	0.0946174	AUGGCUU	ENSMUST00000063199.6|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000027886.7|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000172057.1|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2
mm10_v2_chr15_+_88751649_88751661	0.0945335	AUGGCUU	ENSMUST00000041297.8|Zbed4|ENSMUSG00000034333.9|zinc finger, BED domain containing 4
mm10_v2_chr11_-_86257518_86257550	0.0937352	AUGGCUU	ENSMUST00000136469.1|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2 	ENSMUST00000018212.6|Ints2|ENSMUSG00000018068.7|integrator complex subunit 2
mm10_v2_chr8_-_67974567_67974596	0.0934073	AUGGCUU	ENSMUST00000098696.3|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000038959.9|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000093469.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr16_-_21694570_21694665	0.0932255	AUGGCUU	ENSMUST00000053336.7|2510009E07Rik|ENSMUSG00000043391.9|RIKEN cDNA 2510009E07 gene
mm10_v2_chr4_-_126429501_126429556	0.0896334	AUGGCUU	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr2_-_125123618_125123661	0.0872845	AUGGCUU	ENSMUST00000142718.1|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor 	ENSMUST00000152367.1|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor 	ENSMUST00000067780.3|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor 	ENSMUST00000147105.1|Myef2|ENSMUSG00000027201.10|myelin basic protein expression factor 2, repressor
mm10_v2_chr13_-_95250166_95250336	0.0867796	AUGGCUU	ENSMUST00000162153.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000160957.2|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000159598.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B 	ENSMUST00000162412.1|Pde8b|ENSMUSG00000021684.10|phosphodiesterase 8B
mm10_v2_chr6_-_38299236_38299290	0.0853124	AUGGCUU	ENSMUST00000058524.2|Zc3hav1l|ENSMUSG00000047749.2|zinc finger CCCH-type, antiviral 1-like
mm10_v2_chr8_+_109868586_109868611	0.0850241	AUGGCUU	ENSMUST00000179721.1|Phlpp2|ENSMUSG00000031732.6|PH domain and leucine rich repeat protein phosphatase 2 	ENSMUST00000034175.4|Phlpp2|ENSMUSG00000031732.6|PH domain and leucine rich repeat protein phosphatase 2
mm10_v2_chr9_+_3532295_3532354	0.0846628	AUGGCUU	ENSMUST00000115733.1|Gucy1a2|ENSMUSG00000041624.9|guanylate cyclase 1, soluble, alpha 2
mm10_v2_chr4_+_11156411_11156453	0.0835387	AUGGCUU	ENSMUST00000029865.3|Trp53inp1|ENSMUSG00000028211.5|transformation related protein 53 inducible nuclear protein 1
mm10_v2_chr10_+_58255465_58255539	0.0832387	AUGGCUU	ENSMUST00000057659.7|Gcc2|ENSMUSG00000038039.7|GRIP and coiled-coil domain containing 2 	ENSMUST00000162041.1|Gcc2|ENSMUSG00000038039.7|GRIP and coiled-coil domain containing 2 	ENSMUST00000162860.1|Gcc2|ENSMUSG00000038039.7|GRIP and coiled-coil domain containing 2
mm10_v2_chr7_+_120677579_120677630	0.0826089	AUGGCUU	ENSMUST00000060175.6|BC030336|ENSMUSG00000046096.6|cDNA sequence BC030336
mm10_v2_chr15_+_39198244_39198363	0.0820829	AUGGCUU	ENSMUST00000082054.5|Rims2|ENSMUSG00000037386.9|regulating synaptic membrane exocytosis 2 	ENSMUST00000042917.9|Rims2|ENSMUSG00000037386.9|regulating synaptic membrane exocytosis 2
mm10_v2_chr11_-_119547744_119547759	0.0820465	AUGGCUU	ENSMUST00000026670.4|Nptx1|ENSMUSG00000025582.4|neuronal pentraxin 1
mm10_v2_chr2_+_37516618_37516634	0.0788783	AUGGCUU	ENSMUST00000065441.6|Gpr21|ENSMUSG00000053164.6|G protein-coupled receptor 21
mm10_v2_chr15_-_78120011_78120033	0.078096	AUGGCUU	ENSMUST00000019290.2|Cacng2|ENSMUSG00000019146.2|calcium channel, voltage-dependent, gamma subunit 2
mm10_v2_chr11_+_74619594_74619643	0.0779145	AUGGCUU	ENSMUST00000100866.2|E130309D14Rik|ENSMUSG00000069814.6|RIKEN cDNA E130309D14 gene
mm10_v2_chr12_-_103242143_103242150	0.0775653	AUGGCUU	ENSMUST00000074416.3|Prima1|ENSMUSG00000041669.9|proline rich membrane anchor 1
mm10_v2_chr4_+_28813125_28813136	0.0734319	AUGGCUU	ENSMUST00000029964.5|Epha7|ENSMUSG00000028289.6|Eph receptor A7 	ENSMUST00000080934.4|Epha7|ENSMUSG00000028289.6|Eph receptor A7
mm10_v2_chr18_+_21001292_21001341	0.0732029	AUGGCUU	ENSMUST00000072847.5|Rnf138|ENSMUSG00000024317.8|ring finger protein 138 	ENSMUST00000052396.5|Rnf138|ENSMUSG00000024317.8|ring finger protein 138
mm10_v2_chr13_+_56702983_56703112	0.0710553	AUGGCUU	ENSMUST00000069557.7|Smad5|ENSMUSG00000021540.10|SMAD family member 5 	ENSMUST00000109876.1|Smad5|ENSMUSG00000021540.10|SMAD family member 5
mm10_v2_chr8_+_85036906_85036925	0.0708474	AUGGCUU	ENSMUST00000093360.4|Tnpo2|ENSMUSG00000031691.7|transportin 2 (importin 3, karyopherin beta 2b)
mm10_v2_chr11_+_101176041_101176041	0.069232	AUGGCUU	ENSMUST00000103109.3|Cntnap1|ENSMUSG00000017167.6|contactin associated protein-like 1
mm10_v2_chr5_-_67847400_67847439	0.0687688	AUGGCUU	ENSMUST00000113652.1|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENSMUST00000113651.1|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENSMUST00000037380.8|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm10_v2_chr14_-_60086832_60086890	0.0687345	AUGGCUU	ENSMUST00000080368.5|Atp8a2|ENSMUSG00000021983.9|ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
mm10_v2_chr3_+_142530329_142530386	0.0672662	AUGGCUU	ENSMUST00000171263.1|Gbp7|ENSMUSG00000040253.9|guanylate binding protein 7 	ENSMUST00000045097.9|Gbp7|ENSMUSG00000040253.9|guanylate binding protein 7
mm10_v2_chr4_-_34687382_34687452	0.0665653	AUGGCUU	ENSMUST00000029970.7|Slc35a1|ENSMUSG00000028293.8|solute carrier family 35 (CMP-sialic acid transporter), member 1
mm10_v2_chr9_-_44767792_44767845	0.0665606	AUGGCUU	ENSMUST00000034607.9|Arcn1|ENSMUSG00000032096.9|archain 1
mm10_v2_chr1_+_131910458_131910539	0.066082	AUGGCUU	ENSMUST00000062264.6|Nucks1|ENSMUSG00000026434.6|nuclear casein kinase and cyclin-dependent kinase substrate 1
mm10_v2_chr1_+_166254095_166254156	0.0652225	AUGGCUU	ENSMUST00000111416.1|Ildr2|ENSMUSG00000040612.8|immunoglobulin-like domain containing receptor 2
mm10_v2_chr1_+_127774164_127774238	0.0610568	AUGGCUU	ENSMUST00000027587.8|Ccnt2|ENSMUSG00000026349.8|cyclin T2 	ENSMUST00000112570.1|Ccnt2|ENSMUSG00000026349.8|cyclin T2
mm10_v2_chr5_-_20882072_20882124	0.0594951	AUGGCUU	ENSMUST00000118174.1|Phtf2|ENSMUSG00000039987.9|putative homeodomain transcription factor 2
mm10_v2_chr9_+_43744399_43744576	0.0587062	AUGGCUU	ENSMUST00000034510.7|Pvrl1|ENSMUSG00000032012.7|poliovirus receptor-related 1
mm10_v2_chr6_+_72347301_72347379	0.0546828	AUGGCUU	ENSMUST00000077783.3|0610030E20Rik|ENSMUSG00000058706.3|RIKEN cDNA 0610030E20 gene
mm10_v2_chr17_+_29032664_29032681	0.0543504	AUGGCUU	ENSMUST00000130216.1|Srsf3|ENSMUSG00000071172.6|serine/arginine-rich splicing factor 3
mm10_v2_chr4_-_141723401_141723436	0.0534944	AUGGCUU	ENSMUST00000102484.4|Ddi2|ENSMUSG00000078515.3|DNA-damage inducible protein 2 	ENSMUST00000177592.1|Rsc1a1|ENSMUSG00000040715.11|regulatory solute carrier protein, family 1, member 1
mm10_v2_chr18_+_61555258_61555290	0.0532458	AUGGCUU	ENSMUST00000165123.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr16_+_32430895_32430978	0.0521113	AUGGCUU	ENSMUST00000115137.1|Pcyt1a|ENSMUSG00000005615.8|phosphate cytidylyltransferase 1, choline, alpha isoform 	ENSMUST00000079791.4|Pcyt1a|ENSMUSG00000005615.8|phosphate cytidylyltransferase 1, choline, alpha isoform
mm10_v2_chr3_-_69127098_69127113	0.0519889	AUGGCUU	ENSMUST00000029353.2|Kpna4|ENSMUSG00000027782.4|karyopherin (importin) alpha 4
mm10_v2_chr4_+_83525540_83525616	0.0513379	AUGGCUU	ENSMUST00000053414.6|Ccdc171|ENSMUSG00000052407.10|coiled-coil domain containing 171 	ENSMUST00000126429.1|Ccdc171|ENSMUSG00000052407.10|coiled-coil domain containing 171
mm10_v2_chr1_-_193370260_193370297	0.0511523	AUGGCUU	ENSMUST00000016323.4|Camk1g|ENSMUSG00000016179.5|calcium/calmodulin-dependent protein kinase I gamma
mm10_v2_chr2_+_119972699_119972746	0.0506597	AUGGCUU	ENSMUST00000066058.7|Mapkbp1|ENSMUSG00000033902.11|mitogen-activated protein kinase binding protein 1
mm10_v2_chr19_+_55742242_55742468	0.0497959	AUGGCUU	ENSMUST00000111652.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111649.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111651.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111653.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111656.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000127233.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000153888.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr14_+_54883377_54883507	0.0493676	AUGGCUU	ENSMUST00000022806.3|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000134077.1|Gm20521|ENSMUSG00000092232.1|predicted gene 20521 	ENSMUST00000172844.1|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000133397.2|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2
mm10_v2_chr3_-_127780461_127780529	0.0491221	AUGGCUU	ENSMUST00000029662.5|Alpk1|ENSMUSG00000028028.5|alpha-kinase 1 	ENSMUST00000161239.1|Alpk1|ENSMUSG00000028028.5|alpha-kinase 1
mm10_v2_chr3_+_32817520_32817576	0.0488106	AUGGCUU	ENSMUST00000072312.5|Usp13|ENSMUSG00000056900.7|ubiquitin specific peptidase 13 (isopeptidase T-3) 	ENSMUST00000108228.1|Usp13|ENSMUSG00000056900.7|ubiquitin specific peptidase 13 (isopeptidase T-3)
mm10_v2_chr11_+_80209019_80209057	0.0473075	AUGGCUU	ENSMUST00000077451.7|Rhot1|ENSMUSG00000017686.10|ras homolog gene family, member T1 	ENSMUST00000055056.9|Rhot1|ENSMUSG00000017686.10|ras homolog gene family, member T1
mm10_v2_chr13_-_89742490_89742515	0.0467325	AUGGCUU	ENSMUST00000109546.2|Vcan|ENSMUSG00000021614.10|versican
mm10_v2_chr4_+_100095791_100095867	0.0464647	AUGGCUU	ENSMUST00000039630.5|Ror1|ENSMUSG00000035305.5|receptor tyrosine kinase-like orphan receptor 1
mm10_v2_chr7_-_121707253_121707460	0.0459722	AUGGCUU	ENSMUST00000046929.6|Usp31|ENSMUSG00000063317.6|ubiquitin specific peptidase 31
mm10_v2_chr9_+_65908967_65909020	0.0450768	AUGGCUU	ENSMUST00000034949.3|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1 	ENSMUST00000154589.1|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1
mm10_v2_chr2_-_170131156_170131220	0.0446471	AUGGCUU	ENSMUST00000063710.6|Zfp217|ENSMUSG00000052056.8|zinc finger protein 217
mm10_v2_chr4_+_17853451_17853474	0.0442013	AUGGCUU	ENSMUST00000029881.3|Mmp16|ENSMUSG00000028226.9|matrix metallopeptidase 16
mm10_v2_chr3_+_145576196_145576266	0.0419958	AUGGCUU	ENSMUST00000098534.4|Znhit6|ENSMUSG00000074182.4|zinc finger, HIT type 6
mm10_v2_chr16_+_17233560_17233664	0.0413225	AUGGCUU	ENSMUST00000090190.5|Hic2|ENSMUSG00000050240.8|hypermethylated in cancer 2 	ENSMUST00000115698.2|Hic2|ENSMUSG00000050240.8|hypermethylated in cancer 2
mm10_v2_chr12_+_110485710_110485755	0.0402735	AUGGCUU	ENSMUST00000084985.3|Ppp2r5c|ENSMUSG00000017843.7|protein phosphatase 2, regulatory subunit B (B56), gamma isoform 	ENSMUST00000109832.1|Ppp2r5c|ENSMUSG00000017843.7|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm10_v2_chr6_+_146724957_146725036	0.0388599	AUGGCUU	ENSMUST00000001675.7|Stk38l|ENSMUSG00000001630.7|serine/threonine kinase 38 like 	ENSMUST00000111644.1|Stk38l|ENSMUSG00000001630.7|serine/threonine kinase 38 like
mm10_v2_chr10_+_82985473_82985504	0.0366973	AUGGCUU	ENSMUST00000040110.7|Chst11|ENSMUSG00000034612.7|carbohydrate sulfotransferase 11
mm10_v2_chr11_+_69326252_69326275	0.0347804	AUGGCUU	ENSMUST00000018614.2|Kcnab3|ENSMUSG00000018470.2|potassium voltage-gated channel, shaker-related subfamily, beta member 3
mm10_v2_chr6_+_115931922_115931937	0.0343877	AUGGCUU	ENSMUST00000032471.6|Rho|ENSMUSG00000030324.6|rhodopsin
mm10_v2_chr4_+_42916647_42916712	0.0339557	AUGGCUU	ENSMUST00000132173.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178 	ENSMUST00000107975.1|N28178|ENSMUSG00000036062.7|expressed sequence N28178
mm10_v2_chr6_+_55451978_55452057	0.0331753	AUGGCUU	ENSMUST00000070736.5|Adcyap1r1|ENSMUSG00000029778.6|adenylate cyclase activating polypeptide 1 receptor 1 	ENSMUST00000070756.5|Adcyap1r1|ENSMUSG00000029778.6|adenylate cyclase activating polypeptide 1 receptor 1 	ENSMUST00000166962.1|Adcyap1r1|ENSMUSG00000029778.6|adenylate cyclase activating polypeptide 1 receptor 1
mm10_v2_chr1_-_178337774_178337797	0.0330258	AUGGCUU	ENSMUST00000037748.7|Hnrnpu|ENSMUSG00000039630.8|heterogeneous nuclear ribonucleoprotein U
mm10_v2_chr19_+_40659770_40659802	0.0319172	AUGGCUU	ENSMUST00000112231.2|Entpd1|ENSMUSG00000048120.10|ectonucleoside triphosphate diphosphohydrolase 1 	ENSMUST00000127828.1|Entpd1|ENSMUSG00000048120.10|ectonucleoside triphosphate diphosphohydrolase 1
mm10_v2_chr1_+_134560190_134560213	0.0305147	AUGGCUU	ENSMUST00000112198.1|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B 	ENSMUST00000112197.1|Kdm5b|ENSMUSG00000042207.11|lysine (K)-specific demethylase 5B
mm10_v2_chr12_-_100725028_100725081	0.0303663	AUGGCUU	ENSMUST00000043599.6|Rps6ka5|ENSMUSG00000021180.8|ribosomal protein S6 kinase, polypeptide 5
mm10_v2_chr1_+_37299882_37299937	0.0300218	AUGGCUU	ENSMUST00000136846.1|Inpp4a|ENSMUSG00000026113.11|inositol polyphosphate-4-phosphatase, type I 	ENSMUST00000027287.4|Inpp4a|ENSMUSG00000026113.11|inositol polyphosphate-4-phosphatase, type I 	ENSMUST00000132401.1|Inpp4a|ENSMUSG00000026113.11|inositol polyphosphate-4-phosphatase, type I
mm10_v2_chr13_-_113618549_113618565	0.0296371	AUGGCUU	ENSMUST00000109241.3|Snx18|ENSMUSG00000042364.10|sorting nexin 18
mm10_v2_chr4_+_101068983_101069029	0.0294418	AUGGCUU	ENSMUST00000038463.8|Raver2|ENSMUSG00000035275.8|ribonucleoprotein, PTB-binding 2 	ENSMUST00000106955.1|Raver2|ENSMUSG00000035275.8|ribonucleoprotein, PTB-binding 2
mm10_v2_chr12_-_4477138_4477196	0.029309	AUGGCUU	ENSMUST00000085814.3|Ncoa1|ENSMUSG00000020647.9|nuclear receptor coactivator 1
mm10_v2_chr18_+_44380479_44380554	0.0288872	AUGGCUU	ENSMUST00000025350.8|Dcp2|ENSMUSG00000024472.8|DCP2 decapping enzyme homolog (S. cerevisiae)
mm10_v2_chr15_+_103240405_103240432	0.0285757	AUGGCUU	ENSMUST00000036004.9|Hnrnpa1|ENSMUSG00000046434.9|heterogeneous nuclear ribonucleoprotein A1 	ENSMUST00000087351.7|Hnrnpa1|ENSMUSG00000046434.9|heterogeneous nuclear ribonucleoprotein A1
mm10_v2_chr4_-_136021722_136021763	0.0280255	AUGGCUU	ENSMUST00000030427.5|Tceb3|ENSMUSG00000028668.5|transcription elongation factor B (SIII), polypeptide 3
mm10_v2_chr11_+_42419729_42419785	0.0263264	AUGGCUU	ENSMUST00000007797.4|Gabrb2|ENSMUSG00000007653.6|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm10_v2_chr9_-_104063049_104063146	0.0258937	AUGGCUU	ENSMUST00000035166.5|Uba5|ENSMUSG00000032557.5|ubiquitin-like modifier activating enzyme 5
mm10_v2_chrX_+_9199865_9199907	0.0255047	AUGGCUU	ENSMUST00000069763.2|Lancl3|ENSMUSG00000047344.9|LanC lantibiotic synthetase component C-like 3 (bacterial)
mm10_v2_chr15_-_77307043_77307058	0.0254556	AUGGCUU	ENSMUST00000048145.5|Rbfox2|ENSMUSG00000033565.10|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENSMUST00000171751.1|Rbfox2|ENSMUSG00000033565.10|RNA binding protein, fox-1 homolog (C. elegans) 2
mm10_v2_chr11_-_99230998_99231019	0.0252149	AUGGCUU	ENSMUST00000103133.3|Smarce1|ENSMUSG00000037935.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm10_v2_chr2_+_55437100_55437182	0.0245959	AUGGCUU	ENSMUST00000112633.2|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3 	ENSMUST00000112632.1|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3
mm10_v2_chr10_-_95564167_95564181	0.0242947	AUGGCUU	ENSMUST00000020217.5|Nudt4|ENSMUSG00000020029.5|nudix (nucleoside diphosphate linked moiety X)-type motif 4
mm10_v2_chr19_-_41802028_41802084	0.0241626	AUGGCUU	ENSMUST00000026150.8|Arhgap19|ENSMUSG00000025154.8|Rho GTPase activating protein 19 	ENSMUST00000177495.1|Arhgap19|ENSMUSG00000025154.8|Rho GTPase activating protein 19 	ENSMUST00000163265.1|Arhgap19|ENSMUSG00000025154.8|Rho GTPase activating protein 19
mm10_v2_chr19_+_27217357_27217424	0.0224389	AUGGCUU	ENSMUST00000047645.6|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000167487.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chr10_-_75932468_75932502	0.0223163	AUGGCUU	ENSMUST00000120281.1|Mmp11|ENSMUSG00000000901.9|matrix metallopeptidase 11 	ENSMUST00000000924.6|Mmp11|ENSMUSG00000000901.9|matrix metallopeptidase 11
mm10_v2_chr3_+_122245557_122245578	0.0222624	AUGGCUU	ENSMUST00000029769.7|Gclm|ENSMUSG00000028124.9|glutamate-cysteine ligase, modifier subunit
mm10_v2_chr15_-_73423180_73423218	0.0217088	AUGGCUU	ENSMUST00000110036.2|Ptk2|ENSMUSG00000022607.8|PTK2 protein tyrosine kinase 2 	ENSMUST00000170939.1|Ptk2|ENSMUSG00000022607.8|PTK2 protein tyrosine kinase 2
mm10_v2_chr4_+_6365650_6365720	0.0216065	AUGGCUU	ENSMUST00000029912.4|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000103008.5|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000175769.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000108374.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000140830.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein
mm10_v2_chr18_+_36281069_36281151	0.0213693	AUGGCUU	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr13_+_16014457_16014475	0.0212965	AUGGCUU	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr11_+_98937669_98937735	0.0211492	AUGGCUU	ENSMUST00000107475.2|Rara|ENSMUSG00000037992.10|retinoic acid receptor, alpha 	ENSMUST00000068133.3|Rara|ENSMUSG00000037992.10|retinoic acid receptor, alpha
mm10_v2_chr7_-_51862216_51862281	0.0207302	AUGGCUU	ENSMUST00000169357.1|Fancf|ENSMUSG00000092118.1|Fanconi anemia, complementation group F
mm10_v2_chr16_-_22163299_22163299	0.020567	AUGGCUU	ENSMUST00000100052.4|Igf2bp2|ENSMUSG00000033581.10|insulin-like growth factor 2 mRNA binding protein 2
mm10_v2_chr1_-_173367638_173367695	0.0189034	AUGGCUU	ENSMUST00000005470.4|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3 	ENSMUST00000111220.1|Cadm3|ENSMUSG00000005338.7|cell adhesion molecule 3
mm10_v2_chr16_-_58523349_58523426	0.018176	AUGGCUU	ENSMUST00000137035.1|St3gal6|ENSMUSG00000022747.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
mm10_v2_chr9_-_44251464_44251491	0.0181212	AUGGCUU	ENSMUST00000034618.4|Pdzd3|ENSMUSG00000032105.4|PDZ domain containing 3
mm10_v2_chr6_-_127151044_127151055	0.0175682	AUGGCUU	ENSMUST00000000188.8|Ccnd2|ENSMUSG00000000184.9|cyclin D2
mm10_v2_chr7_+_110061702_110061732	0.0175276	AUGGCUU	ENSMUST00000084727.3|Zfp143|ENSMUSG00000061079.7|zinc finger protein 143 	ENSMUST00000169638.2|Zfp143|ENSMUSG00000061079.7|zinc finger protein 143
mm10_v2_chr1_+_75546258_75546312	0.0163951	AUGGCUU	ENSMUST00000124341.1|Slc4a3|ENSMUSG00000006576.10|solute carrier family 4 (anion exchanger), member 3
mm10_v2_chr19_+_43689672_43689695	0.0157295	AUGGCUU	ENSMUST00000081079.5|Entpd7|ENSMUSG00000025192.7|ectonucleoside triphosphate diphosphohydrolase 7
mm10_v2_chr15_+_86058727_86058793	0.0155672	AUGGCUU	ENSMUST00000138134.1|Gramd4|ENSMUSG00000035900.12|GRAM domain containing 4
mm10_v2_chr17_-_54299034_54299034	0.0152952	AUGGCUU	ENSMUST00000095712.3|Slc5a7|ENSMUSG00000023945.6|solute carrier family 5 (choline transporter), member 7
mm10_v2_chr7_+_91090697_91090727	0.0149662	AUGGCUU	ENSMUST00000107196.2|Dlg2|ENSMUSG00000052572.9|discs, large homolog 2 (Drosophila)
mm10_v2_chr9_+_78113275_78113346	0.0133961	AUGGCUU	ENSMUST00000009972.5|Ick|ENSMUSG00000009828.9|intestinal cell kinase 	ENSMUST00000117330.1|Ick|ENSMUSG00000009828.9|intestinal cell kinase 	ENSMUST00000044551.7|Ick|ENSMUSG00000009828.9|intestinal cell kinase
mm10_v2_chr15_-_43170809_43170834	0.0133917	AUGGCUU	ENSMUST00000063492.6|Rspo2|ENSMUSG00000051920.6|R-spondin 2 homolog (Xenopus laevis)
mm10_v2_chr1_-_164458345_164458363	0.0133763	AUGGCUU	ENSMUST00000027863.7|Atp1b1|ENSMUSG00000026576.7|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm10_v2_chr6_-_11907419_11907484	0.0130728	AUGGCUU	ENSMUST00000031637.5|Ndufa4|ENSMUSG00000029632.5|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4
mm10_v2_chr19_+_11912389_11912475	0.0128442	AUGGCUU	ENSMUST00000061618.7|Patl1|ENSMUSG00000046139.7|protein associated with topoisomerase II homolog 1 (yeast)
mm10_v2_chr8_+_95703037_95703063	0.0118463	AUGGCUU	ENSMUST00000073139.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4 	ENSMUST00000080666.7|Ndrg4|ENSMUSG00000036564.10|N-myc downstream regulated gene 4
mm10_v2_chr10_-_18743691_18743760	0.0115937	AUGGCUU	ENSMUST00000019999.5|D10Bwg1379e|ENSMUSG00000019852.6|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed
mm10_v2_chr12_-_26415256_26415303	0.0112999	AUGGCUU	ENSMUST00000020971.6|Rnf144a|ENSMUSG00000020642.6|ring finger protein 144A 	ENSMUST00000062149.4|Rnf144a|ENSMUSG00000020642.6|ring finger protein 144A
mm10_v2_chrX_+_153237748_153237748	0.0109886	AUGGCUU	ENSMUST00000112574.2|Klf8|ENSMUSG00000041649.7|Kruppel-like factor 8
mm10_v2_chr1_+_185204165_185204183	0.0106499	AUGGCUU	ENSMUST00000069652.6|Rab3gap2|ENSMUSG00000039318.7|RAB3 GTPase activating protein subunit 2
mm10_v2_chr16_-_13668122_13668181	0.00990194	AUGGCUU	ENSMUST00000058884.8|Parn|ENSMUSG00000022685.8|poly(A)-specific ribonuclease (deadenylation nuclease)
mm10_v2_chr1_+_74506044_74506105	0.00870768	AUGGCUU	ENSMUST00000087215.5|Rqcd1|ENSMUSG00000026174.8|rcd1 (required for cell differentiation) homolog 1 (S. pombe)
mm10_v2_chr15_-_53346118_53346169	0.0084742	AUGGCUU	ENSMUST00000077273.2|Ext1|ENSMUSG00000061731.3|exostoses (multiple) 1
mm10_v2_chr9_+_68653761_68653786	0.0082683	AUGGCUU	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
mm10_v2_chr2_+_32288244_32288256	0.00801874	AUGGCUU	ENSMUST00000113377.1|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2 	ENSMUST00000100194.2|Golga2|ENSMUSG00000002546.10|golgi autoantigen, golgin subfamily a, 2
mm10_v2_chr3_-_80913528_80913666	0.00775932	AUGGCUU	ENSMUST00000107743.1|Glrb|ENSMUSG00000028020.10|glycine receptor, beta subunit 	ENSMUST00000029654.8|Glrb|ENSMUSG00000028020.10|glycine receptor, beta subunit
mm10_v2_chr2_-_167349167_167349249	0.00764594	AUGGCUU	ENSMUST00000109221.2|B4galt5|ENSMUSG00000017929.7|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
mm10_v2_chr4_-_135272798_135272819	0.00758661	AUGGCUU	ENSMUST00000037099.8|Clic4|ENSMUSG00000037242.8|chloride intracellular channel 4 (mitochondrial)
mm10_v2_chr9_+_23223076_23223076	0.00736713	AUGGCUU	ENSMUST00000071982.5|Bmper|ENSMUSG00000031963.7|BMP-binding endothelial regulator
mm10_v2_chr13_-_37994111_37994190	0.00649304	AUGGCUU	ENSMUST00000021864.6|Ssr1|ENSMUSG00000021427.9|signal sequence receptor, alpha
mm10_v2_chr10_-_68278713_68278735	0.00635225	AUGGCUU	ENSMUST00000020106.7|Arid5b|ENSMUSG00000019947.9|AT rich interactive domain 5B (MRF1-like)
mm10_v2_chr1_-_171196229_171196268	0.00567544	AUGGCUU	ENSMUST00000111332.1|Pcp4l1|ENSMUSG00000038370.6|Purkinje cell protein 4-like 1
mm10_v2_chr3_-_9610074_9610086	0.00531195	AUGGCUU	ENSMUST00000041124.7|Zfp704|ENSMUSG00000040209.7|zinc finger protein 704
mm10_v2_chr19_+_53529100_53529109	0.0040862	AUGGCUU	ENSMUST00000038287.6|Dusp5|ENSMUSG00000034765.6|dual specificity phosphatase 5
mm10_v2_chr18_+_64254359_64254387	0.00385495	AUGGCUU	ENSMUST00000025477.7|St8sia3|ENSMUSG00000056812.7|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
mm10_v2_chr9_-_32541589_32541602	0.00376979	AUGGCUU	ENSMUST00000016231.7|Fli1|ENSMUSG00000016087.7|Friend leukemia integration 1
mm10_v2_chr14_+_75136326_75136346	0.00202976	AUGGCUU	ENSMUST00000145303.1|Lcp1|ENSMUSG00000021998.10|lymphocyte cytosolic protein 1
mm10_v2_chr9_-_99436687_99436733	0.00174445	AUGGCUU	ENSMUST00000035045.8|Mras|ENSMUSG00000032470.10|muscle and microspikes RAS
mm10_v2_chr12_+_111039334_111039400	0.000833809	AUGGCUU	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr2_+_166805506_166805605	0.000236233	AUGGCUU	ENSMUST00000099078.3|Arfgef2|ENSMUSG00000074582.4|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
