mm10_v2_chr13_+_9093893_9093927	0.0250757	AUGACAC	ENSMUST00000091829.2|Larp4b|ENSMUSG00000033499.7|La ribonucleoprotein domain family, member 4B
mm10_v2_chr16_-_21694570_21694665	0.0163476	AUGACAC	ENSMUST00000053336.7|2510009E07Rik|ENSMUSG00000043391.9|RIKEN cDNA 2510009E07 gene
mm10_v2_chr3_-_100685431_100685503	0.0163293	AUGACAC	ENSMUST00000008907.7|Man1a2|ENSMUSG00000008763.10|mannosidase, alpha, class 1A, member 2
mm10_v2_chr1_+_85793411_85793541	0.0152647	AUGACAC	ENSMUST00000113360.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39 	ENSMUST00000126962.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39
mm10_v2_chr3_-_75556759_75556871	0.0150753	AUGACAC	ENSMUST00000162138.1|Pdcd10|ENSMUSG00000027835.5|programmed cell death 10 	ENSMUST00000029424.5|Pdcd10|ENSMUSG00000027835.5|programmed cell death 10 	ENSMUST00000161137.1|Pdcd10|ENSMUSG00000027835.5|programmed cell death 10
mm10_v2_chr3_+_104638658_104638675	0.0118601	AUGACAC	ENSMUST00000046212.1|Slc16a1|ENSMUSG00000032902.1|solute carrier family 16 (monocarboxylic acid transporters), member 1
mm10_v2_chr19_-_29805989_29806009	0.011438	AUGACAC	ENSMUST00000177155.1|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene 	ENSMUST00000059484.7|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene
mm10_v2_chr11_+_88068242_88068289	0.0112063	AUGACAC	ENSMUST00000018521.4|Vezf1|ENSMUSG00000018377.4|vascular endothelial zinc finger 1
mm10_v2_chr13_+_9276477_9276620	0.0108516	AUGACAC	ENSMUST00000174552.1|Dip2c|ENSMUSG00000048264.9|DIP2 disco-interacting protein 2 homolog C (Drosophila)
mm10_v2_chr11_+_72607221_72607307	0.0107145	AUGACAC	ENSMUST00000021148.6|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1 	ENSMUST00000138247.1|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1
mm10_v2_chr13_-_114458720_114458736	0.0102459	AUGACAC	ENSMUST00000022287.5|Fst|ENSMUSG00000021765.7|follistatin
mm10_v2_chr2_+_48949495_48949522	0.0101872	AUGACAC	ENSMUST00000112745.1|Mbd5|ENSMUSG00000036792.6|methyl-CpG binding domain protein 5
mm10_v2_chr9_-_75409352_75409383	0.0101805	AUGACAC	ENSMUST00000168937.1|Mapk6|ENSMUSG00000042688.10|mitogen-activated protein kinase 6
mm10_v2_chr9_-_101251810_101251839	0.009992	AUGACAC	ENSMUST00000075941.5|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr9_+_101074727_101074727	0.00985995	AUGACAC	ENSMUST00000085177.3|Msl2|ENSMUSG00000066415.3|male-specific lethal 2 homolog (Drosophila)
mm10_v2_chr16_+_24393350_24393428	0.00935791	AUGACAC	ENSMUST00000038053.6|Lpp|ENSMUSG00000033306.8|LIM domain containing preferred translocation partner in lipoma
mm10_v2_chr16_-_32079270_32079368	0.00930034	AUGACAC	ENSMUST00000023467.8|Pak2|ENSMUSG00000022781.8|p21 protein (Cdc42/Rac)-activated kinase 2
mm10_v2_chr9_-_70657121_70657188	0.00929007	AUGACAC	ENSMUST00000049031.5|Fam63b|ENSMUSG00000042444.9|family with sequence similarity 63, member B
mm10_v2_chr14_+_17660956_17660963	0.00912753	AUGACAC	ENSMUST00000022303.7|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta 	ENSMUST00000091471.4|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta
mm10_v2_chr1_-_46854046_46854079	0.00893894	AUGACAC	ENSMUST00000027131.4|Slc39a10|ENSMUSG00000025986.5|solute carrier family 39 (zinc transporter), member 10
mm10_v2_chr15_+_54745702_54745702	0.00869535	AUGACAC	ENSMUST00000050027.8|Nov|ENSMUSG00000037362.8|nephroblastoma overexpressed gene
mm10_v2_chr3_-_58525867_58525873	0.00862753	AUGACAC	ENSMUST00000029385.7|Serp1|ENSMUSG00000027808.7|stress-associated endoplasmic reticulum protein 1
mm10_v2_chr2_-_20968881_20968957	0.00855188	AUGACAC	ENSMUST00000114594.1|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr11_-_86807624_86807746	0.00853466	AUGACAC	ENSMUST00000018569.7|Dhx40|ENSMUSG00000018425.12|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm10_v2_chr15_+_55307743_55307762	0.00792215	AUGACAC	ENSMUST00000023053.5|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1 	ENSMUST00000110221.2|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1 	ENSMUST00000110217.3|Col14a1|ENSMUSG00000022371.9|collagen, type XIV, alpha 1
mm10_v2_chr2_+_71211706_71211794	0.00765892	AUGACAC	ENSMUST00000112142.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112139.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112140.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2 	ENSMUST00000112138.1|Dync1i2|ENSMUSG00000027012.9|dynein cytoplasmic 1 intermediate chain 2
mm10_v2_chr7_+_131966446_131966469	0.00728243	AUGACAC	ENSMUST00000045840.4|Gpr26|ENSMUSG00000040125.4|G protein-coupled receptor 26
mm10_v2_chr11_+_80209019_80209057	0.00697343	AUGACAC	ENSMUST00000077451.7|Rhot1|ENSMUSG00000017686.10|ras homolog gene family, member T1 	ENSMUST00000055056.9|Rhot1|ENSMUSG00000017686.10|ras homolog gene family, member T1
mm10_v2_chr19_-_10525201_10525214	0.00655675	AUGACAC	ENSMUST00000025570.6|Sdhaf2|ENSMUSG00000024668.7|succinate dehydrogenase complex assembly factor 2
mm10_v2_chr10_+_69533761_69533776	0.00652468	AUGACAC	ENSMUST00000182884.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr1_-_43827751_43827800	0.00632118	AUGACAC	ENSMUST00000128261.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000126008.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000139451.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1
mm10_v2_chr13_+_118714678_118714701	0.00618511	AUGACAC	ENSMUST00000022246.8|Fgf10|ENSMUSG00000021732.8|fibroblast growth factor 10
mm10_v2_chr5_+_43233463_43233491	0.00604797	AUGACAC	ENSMUST00000169035.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2 	ENSMUST00000166713.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2
mm10_v2_chrX_+_134756563_134756647	0.00585042	AUGACAC	ENSMUST00000081834.3|Armcx3|ENSMUSG00000049047.5|armadillo repeat containing, X-linked 3 	ENSMUST00000086880.4|Armcx3|ENSMUSG00000049047.5|armadillo repeat containing, X-linked 3 	ENSMUST00000086884.4|Armcx3|ENSMUSG00000049047.5|armadillo repeat containing, X-linked 3
mm10_v2_chr2_+_59160884_59161008	0.00553454	AUGACAC	ENSMUST00000037903.8|Pkp4|ENSMUSG00000026991.14|plakophilin 4
mm10_v2_chr4_+_129820702_129820709	0.00545959	AUGACAC	ENSMUST00000165853.1|Ptp4a2|ENSMUSG00000028788.8|protein tyrosine phosphatase 4a2
mm10_v2_chr14_-_21052420_21052450	0.00543258	AUGACAC	ENSMUST00000154460.1|Ap3m1|ENSMUSG00000021824.6|adaptor-related protein complex 3, mu 1 subunit
mm10_v2_chr3_-_158036630_158036647	0.00533998	AUGACAC	ENSMUST00000121326.1|Srsf11|ENSMUSG00000055436.12|serine/arginine-rich splicing factor 11
mm10_v2_chr11_-_116654245_116654325	0.00525196	AUGACAC	ENSMUST00000021166.5|Cygb|ENSMUSG00000020810.5|cytoglobin
mm10_v2_chr13_+_83504032_83504050	0.00516618	AUGACAC	ENSMUST00000163888.1|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C 	ENSMUST00000005722.7|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C
mm10_v2_chr7_+_107567445_107567461	0.00503569	AUGACAC	ENSMUST00000120990.1|Olfml1|ENSMUSG00000051041.7|olfactomedin-like 1
mm10_v2_chr8_-_87804411_87804463	0.00488633	AUGACAC	ENSMUST00000165770.2|Zfp423|ENSMUSG00000045333.9|zinc finger protein 423
mm10_v2_chr13_-_47106176_47106206	0.00474103	AUGACAC	ENSMUST00000021807.6|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding) 	ENSMUST00000135278.1|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding)
mm10_v2_chr11_+_53350783_53350833	0.00375877	AUGACAC	ENSMUST00000060945.5|Aff4|ENSMUSG00000049470.7|AF4/FMR2 family, member 4
mm10_v2_chr19_+_8819401_8819401	0.00363983	AUGACAC	ENSMUST00000096753.3|Hnrnpul2|ENSMUSG00000071659.3|heterogeneous nuclear ribonucleoprotein U-like 2
mm10_v2_chr8_-_8660773_8660773	0.00284155	AUGACAC	ENSMUST00000001319.7|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr1_+_57774842_57774932	0.0028162	AUGACAC	ENSMUST00000167085.1|Spats2l|ENSMUSG00000038305.8|spermatogenesis associated, serine-rich 2-like
mm10_v2_chr3_-_119783262_119783388	0.00267432	AUGACAC	ENSMUST00000029780.7|Ptbp2|ENSMUSG00000028134.7|polypyrimidine tract binding protein 2
mm10_v2_chr3_-_115715031_115715062	0.00254969	AUGACAC	ENSMUST00000055676.2|S1pr1|ENSMUSG00000045092.7|sphingosine-1-phosphate receptor 1
mm10_v2_chr13_-_12106945_12106984	0.0024961	AUGACAC	ENSMUST00000021750.7|Ryr2|ENSMUSG00000021313.9|ryanodine receptor 2, cardiac 	ENSMUST00000170156.2|Ryr2|ENSMUSG00000021313.9|ryanodine receptor 2, cardiac
mm10_v2_chr2_-_104494400_104494463	0.00224226	AUGACAC	ENSMUST00000028600.7|Hipk3|ENSMUSG00000027177.8|homeodomain interacting protein kinase 3
mm10_v2_chr2_-_33468493_33468572	0.00219666	AUGACAC	ENSMUST00000113156.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000028125.5|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000126442.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43
mm10_v2_chr11_-_34208085_34208092	0.00141578	AUGACAC	ENSMUST00000060271.2|Foxi1|ENSMUSG00000047861.2|forkhead box I1
mm10_v2_chr1_+_86703788_86703843	0.00140155	AUGACAC	ENSMUST00000168237.1|Dis3l2|ENSMUSG00000053333.9|DIS3 mitotic control homolog (S. cerevisiae)-like 2 	ENSMUST00000065694.6|Dis3l2|ENSMUSG00000053333.9|DIS3 mitotic control homolog (S. cerevisiae)-like 2
mm10_v2_chr3_-_58885212_58885354	0.00133575	AUGACAC	ENSMUST00000055636.6|Clrn1|ENSMUSG00000043850.9|clarin 1 	ENSMUST00000072551.6|Clrn1|ENSMUSG00000043850.9|clarin 1 	ENSMUST00000051408.7|Clrn1|ENSMUSG00000043850.9|clarin 1
mm10_v2_chr13_+_41606216_41606216	0.000931859	AUGACAC	ENSMUST00000129449.1|Tmem170b|ENSMUSG00000087370.2|transmembrane protein 170B
mm10_v2_chr12_-_84970814_84970900	0.000536519	AUGACAC	ENSMUST00000165886.1|Arel1|ENSMUSG00000042350.7|apoptosis resistant E3 ubiquitin protein ligase 1 	ENSMUST00000167448.1|Arel1|ENSMUSG00000042350.7|apoptosis resistant E3 ubiquitin protein ligase 1 	ENSMUST00000043169.7|Arel1|ENSMUSG00000042350.7|apoptosis resistant E3 ubiquitin protein ligase 1
mm10_v2_chr5_-_149636331_149636376	0.000204688	AUGACAC	ENSMUST00000074846.7|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000110498.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000127977.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1 	ENSMUST00000132412.1|Hsph1|ENSMUSG00000029657.9|heat shock 105kDa/110kDa protein 1
mm10_v2_chr9_+_65908967_65909020	0.000108932	AUGACAC	ENSMUST00000034949.3|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1 	ENSMUST00000154589.1|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1
