mm10_v2_chr18_-_43737186_43737237	0.62752	AGUGGUU	ENSMUST00000025381.2|Spink3|ENSMUSG00000024503.2|serine peptidase inhibitor, Kazal type 3
mm10_v2_chr15_-_11905609_11905674	0.588585	AGUGGUU	ENSMUST00000066529.3|Npr3|ENSMUSG00000022206.6|natriuretic peptide receptor 3
mm10_v2_chr9_-_85327110_85327128	0.54281	AGUGGUU	ENSMUST00000034802.8|Fam46a|ENSMUSG00000032265.8|family with sequence similarity 46, member A
mm10_v2_chr9_+_70678950_70679010	0.538404	AGUGGUU	ENSMUST00000067880.6|Adam10|ENSMUSG00000054693.8|a disintegrin and metallopeptidase domain 10
mm10_v2_chr14_+_16365171_16365194	0.504456	AGUGGUU	ENSMUST00000017629.4|Top2b|ENSMUSG00000017485.4|topoisomerase (DNA) II beta
mm10_v2_chr2_+_112379204_112379253	0.497617	AGUGGUU	ENSMUST00000028552.3|Katnbl1|ENSMUSG00000027132.3|katanin p80 subunit B like 1
mm10_v2_chr2_+_117121374_117121374	0.496314	AGUGGUU	ENSMUST00000028829.6|Spred1|ENSMUSG00000027351.8|sprouty protein with EVH-1 domain 1, related sequence
mm10_v2_chr7_+_110018301_110018425	0.486952	AGUGGUU	ENSMUST00000084731.3|Ipo7|ENSMUSG00000066232.3|importin 7
mm10_v2_chr13_-_28953690_28953713	0.44812	AGUGGUU	ENSMUST00000067230.5|Sox4|ENSMUSG00000076431.4|SRY-box containing gene 4
mm10_v2_chr13_+_5861489_5861501	0.438399	AGUGGUU	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr1_+_93478964_93479108	0.428479	AGUGGUU	ENSMUST00000027495.8|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000136182.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000131175.2|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000179353.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000172165.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000153826.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000129211.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000168776.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000112912.1|Sept2|ENSMUSG00000026276.11|septin 2
mm10_v2_chr11_-_102088471_102088530	0.415272	AGUGGUU	ENSMUST00000017458.4|Mpp2|ENSMUSG00000017314.6|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
mm10_v2_chr3_+_151437887_151437914	0.393213	AGUGGUU	ENSMUST00000046977.7|Eltd1|ENSMUSG00000039167.7|EGF, latrophilin seven transmembrane domain containing 1
mm10_v2_chr19_+_44931119_44931172	0.375913	AGUGGUU	ENSMUST00000096053.3|Fam178a|ENSMUSG00000036097.7|family with sequence similarity 178, member A
mm10_v2_chr15_-_96699698_96699717	0.361887	AGUGGUU	ENSMUST00000023099.6|Slc38a2|ENSMUSG00000022462.6|solute carrier family 38, member 2
mm10_v2_chr4_-_99829180_99829191	0.346846	AGUGGUU	ENSMUST00000146258.1|Itgb3bp|ENSMUSG00000028549.11|integrin beta 3 binding protein (beta3-endonexin)
mm10_v2_chr8_-_86745950_86746054	0.343021	AGUGGUU	ENSMUST00000045296.4|Siah1a|ENSMUSG00000036840.4|seven in absentia 1A
mm10_v2_chr10_+_62920630_62920646	0.339738	AGUGGUU	ENSMUST00000044977.3|Slc25a16|ENSMUSG00000071253.2|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
mm10_v2_chr4_-_53159885_53159900	0.336783	AGUGGUU	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr1_-_80340480_80340512	0.336167	AGUGGUU	ENSMUST00000163119.1|Cul3|ENSMUSG00000004364.8|cullin 3
mm10_v2_chr12_+_95692212_95692246	0.332141	AGUGGUU	ENSMUST00000057324.3|Flrt2|ENSMUSG00000047414.6|fibronectin leucine rich transmembrane protein 2
mm10_v2_chr11_+_101260569_101260622	0.322268	AGUGGUU	ENSMUST00000103108.1|Wnk4|ENSMUSG00000035112.11|WNK lysine deficient protein kinase 4
mm10_v2_chr3_+_103279293_103279293	0.318966	AGUGGUU	ENSMUST00000029444.6|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33 	ENSMUST00000106860.1|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33
mm10_v2_chr6_-_28261907_28261943	0.315146	AGUGGUU	ENSMUST00000115320.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000123098.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000115321.2|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000155494.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800
mm10_v2_chr9_-_101251810_101251839	0.310373	AGUGGUU	ENSMUST00000075941.5|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr18_+_53176345_53176376	0.308949	AGUGGUU	ENSMUST00000037850.5|Snx2|ENSMUSG00000034484.7|sorting nexin 2
mm10_v2_chrX_+_159255782_159255899	0.305414	AGUGGUU	ENSMUST00000126686.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3 	ENSMUST00000033671.6|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chr11_-_6475992_6476102	0.301481	AGUGGUU	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr6_-_56797637_56797757	0.296995	AGUGGUU	ENSMUST00000114323.1|Kbtbd2|ENSMUSG00000059486.5|kelch repeat and BTB (POZ) domain containing 2
mm10_v2_chr3_+_34020075_34020082	0.28508	AGUGGUU	ENSMUST00000001620.8|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog 	ENSMUST00000167354.1|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog
mm10_v2_chr18_+_35562158_35562174	0.278718	AGUGGUU	ENSMUST00000166793.1|Matr3|ENSMUSG00000037236.8|matrin 3
mm10_v2_chr13_+_15463837_15463980	0.274739	AGUGGUU	ENSMUST00000110510.3|Gli3|ENSMUSG00000021318.9|GLI-Kruppel family member GLI3
mm10_v2_chr1_+_131910458_131910539	0.270368	AGUGGUU	ENSMUST00000062264.6|Nucks1|ENSMUSG00000026434.6|nuclear casein kinase and cyclin-dependent kinase substrate 1
mm10_v2_chr9_+_7764041_7764177	0.268516	AGUGGUU	ENSMUST00000052865.9|Tmem123|ENSMUSG00000050912.9|transmembrane protein 123
mm10_v2_chr4_-_59549314_59549364	0.252498	AGUGGUU	ENSMUST00000148331.2|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3 	ENSMUST00000030076.5|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3
mm10_v2_chr4_+_47353222_47353265	0.251352	AGUGGUU	ENSMUST00000007757.8|Tgfbr1|ENSMUSG00000007613.9|transforming growth factor, beta receptor I
mm10_v2_chr13_+_81657732_81657846	0.250341	AGUGGUU	ENSMUST00000049055.6|Lysmd3|ENSMUSG00000035840.6|LysM, putative peptidoglycan-binding, domain containing 3
mm10_v2_chr11_+_88068242_88068289	0.247974	AGUGGUU	ENSMUST00000018521.4|Vezf1|ENSMUSG00000018377.4|vascular endothelial zinc finger 1
mm10_v2_chr11_-_109473598_109473666	0.239549	AGUGGUU	ENSMUST00000070152.5|Slc16a6|ENSMUSG00000041920.8|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm10_v2_chr10_-_13324160_13324242	0.239397	AGUGGUU	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr18_-_58209926_58210067	0.230069	AGUGGUU	ENSMUST00000025497.6|Fbn2|ENSMUSG00000024598.8|fibrillin 2
mm10_v2_chr1_+_136624901_136624949	0.219627	AGUGGUU	ENSMUST00000047734.8|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281 	ENSMUST00000112046.1|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281
mm10_v2_chr11_-_20741447_20741524	0.218014	AGUGGUU	ENSMUST00000177543.1|Aftph|ENSMUSG00000049659.9|aftiphilin
mm10_v2_chr2_-_6884975_6884996	0.215936	AGUGGUU	ENSMUST00000114924.3|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000170438.1|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2 	ENSMUST00000114934.4|Celf2|ENSMUSG00000002107.12|CUGBP, Elav-like family member 2
mm10_v2_chr3_-_127409044_127409064	0.214203	AGUGGUU	ENSMUST00000182704.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr13_-_103920508_103920572	0.20661	AGUGGUU	ENSMUST00000053927.5|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein 	ENSMUST00000091269.4|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein 	ENSMUST00000022222.5|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein
mm10_v2_chr8_-_102785093_102785114	0.204478	AGUGGUU	ENSMUST00000075190.3|Cdh11|ENSMUSG00000031673.5|cadherin 11
mm10_v2_chr12_-_51691883_51691925	0.199732	AGUGGUU	ENSMUST00000013130.8|Strn3|ENSMUSG00000020954.9|striatin, calmodulin binding protein 3 	ENSMUST00000169503.1|Strn3|ENSMUSG00000020954.9|striatin, calmodulin binding protein 3
mm10_v2_chr3_+_101377074_101377158	0.197876	AGUGGUU	ENSMUST00000043983.5|Igsf3|ENSMUSG00000042035.6|immunoglobulin superfamily, member 3
mm10_v2_chr10_+_25359798_25359844	0.197802	AGUGGUU	ENSMUST00000053748.8|Epb4.1l2|ENSMUSG00000019978.9|erythrocyte protein band 4.1-like 2
mm10_v2_chr1_+_160906372_160906460	0.196704	AGUGGUU	ENSMUST00000161609.1|Rc3h1|ENSMUSG00000040423.4|RING CCCH (C3H) domains 1
mm10_v2_chr15_-_98607611_98607638	0.195822	AGUGGUU	ENSMUST00000096224.4|Adcy6|ENSMUSG00000022994.8|adenylate cyclase 6
mm10_v2_chr2_-_60125651_60125775	0.195734	AGUGGUU	ENSMUST00000112550.1|Baz2b|ENSMUSG00000026987.10|bromodomain adjacent to zinc finger domain, 2B
mm10_v2_chr1_-_91931172_91931176	0.189222	AGUGGUU	ENSMUST00000097644.2|Hdac4|ENSMUSG00000073617.2|histone deacetylase 4
mm10_v2_chr3_+_58415689_58415689	0.188835	AGUGGUU	ENSMUST00000099090.2|Tsc22d2|ENSMUSG00000027806.5|TSC22 domain family, member 2
mm10_v2_chr17_-_15826521_15826590	0.187092	AGUGGUU	ENSMUST00000170578.1|Rgmb|ENSMUSG00000048027.7|RGM domain family, member B
mm10_v2_chr4_+_57845240_57845265	0.186911	AGUGGUU	ENSMUST00000102903.1|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2 	ENSMUST00000107598.3|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2
mm10_v2_chr16_+_87698904_87698959	0.184145	AGUGGUU	ENSMUST00000026703.5|Bach1|ENSMUSG00000025612.5|BTB and CNC homology 1
mm10_v2_chr3_+_9250602_9250602	0.180893	AGUGGUU	ENSMUST00000155203.1|Zbtb10|ENSMUSG00000069114.8|zinc finger and BTB domain containing 10
mm10_v2_chr6_+_142387215_142387269	0.180813	AGUGGUU	ENSMUST00000032372.6|Golt1b|ENSMUSG00000030245.10|golgi transport 1 homolog B (S. cerevisiae)
mm10_v2_chr4_-_123342803_123342918	0.174646	AGUGGUU	ENSMUST00000102641.3|Bmp8a|ENSMUSG00000032726.6|bone morphogenetic protein 8a
mm10_v2_chr6_-_13677930_13677974	0.17437	AGUGGUU	ENSMUST00000045235.5|B630005N14Rik|ENSMUSG00000042742.5|RIKEN cDNA B630005N14 gene
mm10_v2_chr13_-_17944151_17944239	0.171961	AGUGGUU	ENSMUST00000009003.7|Rala|ENSMUSG00000008859.7|v-ral simian leukemia viral oncogene homolog A (ras related)
mm10_v2_chr2_-_75704535_75704641	0.170915	AGUGGUU	ENSMUST00000102672.4|Nfe2l2|ENSMUSG00000015839.6|nuclear factor, erythroid derived 2, like 2
mm10_v2_chr3_+_32529452_32529527	0.169893	AGUGGUU	ENSMUST00000091257.4|Mfn1|ENSMUSG00000027668.7|mitofusin 1
mm10_v2_chr16_-_91171401_91171401	0.168787	AGUGGUU	ENSMUST00000068783.2|Gm9881|ENSMUSG00000052471.2|predicted gene 9881
mm10_v2_chr11_-_78751656_78751729	0.168296	AGUGGUU	ENSMUST00000059468.4|Fam58b|ENSMUSG00000049489.4|family with sequence similarity 58, member B
mm10_v2_chr1_-_9748376_9748451	0.166943	AGUGGUU	ENSMUST00000057438.6|Vcpip1|ENSMUSG00000045210.8|valosin containing protein (p97)/p47 complex interacting protein 1
mm10_v2_chr15_-_36283105_36283150	0.164395	AGUGGUU	ENSMUST00000022890.8|Rnf19a|ENSMUSG00000022280.8|ring finger protein 19A
mm10_v2_chr17_+_74528279_74528295	0.163141	AGUGGUU	ENSMUST00000180037.1|Birc6|ENSMUSG00000024073.8|baculoviral IAP repeat-containing 6 	ENSMUST00000024879.6|Birc6|ENSMUSG00000024073.8|baculoviral IAP repeat-containing 6
mm10_v2_chr14_+_60378242_60378292	0.162191	AGUGGUU	ENSMUST00000022561.6|Amer2|ENSMUSG00000021986.7|APC membrane recruitment 2
mm10_v2_chrX_+_52912232_52912361	0.162086	AGUGGUU	ENSMUST00000078944.6|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000101587.3|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000154864.2|Phf6|ENSMUSG00000025626.10|PHD finger protein 6
mm10_v2_chr6_+_4903298_4903346	0.159552	AGUGGUU	ENSMUST00000035813.2|Ppp1r9a|ENSMUSG00000032827.9|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm10_v2_chr4_-_46566432_46566471	0.158608	AGUGGUU	ENSMUST00000030021.7|Coro2a|ENSMUSG00000028337.8|coronin, actin binding protein 2A 	ENSMUST00000107757.1|Coro2a|ENSMUSG00000028337.8|coronin, actin binding protein 2A
mm10_v2_chr16_-_76373827_76373852	0.153007	AGUGGUU	ENSMUST00000121927.1|Nrip1|ENSMUSG00000048490.7|nuclear receptor interacting protein 1
mm10_v2_chr5_+_96997676_96997766	0.149395	AGUGGUU	ENSMUST00000112974.1|Bmp2k|ENSMUSG00000034663.7|BMP2 inducible kinase 	ENSMUST00000035635.7|Bmp2k|ENSMUSG00000034663.7|BMP2 inducible kinase
mm10_v2_chr12_-_98901478_98901492	0.148352	AGUGGUU	ENSMUST00000065716.6|Eml5|ENSMUSG00000051166.9|echinoderm microtubule associated protein like 5
mm10_v2_chr5_-_32854185_32854256	0.14662	AGUGGUU	ENSMUST00000130134.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like 	ENSMUST00000120129.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like
mm10_v2_chr8_-_36249292_36249516	0.146508	AGUGGUU	ENSMUST00000065297.5|Lonrf1|ENSMUSG00000039633.6|LON peptidase N-terminal domain and ring finger 1
mm10_v2_chr14_-_60251473_60251507	0.146504	AGUGGUU	ENSMUST00000041905.6|Nupl1|ENSMUSG00000063895.6|nucleoporin like 1
mm10_v2_chr1_+_40515362_40515431	0.140271	AGUGGUU	ENSMUST00000027237.5|Il18rap|ENSMUSG00000026068.5|interleukin 18 receptor accessory protein
mm10_v2_chr15_-_51991679_51991760	0.137662	AGUGGUU	ENSMUST00000022927.9|Rad21|ENSMUSG00000022314.9|RAD21 homolog (S. pombe)
mm10_v2_chrX_+_140664908_140665072	0.136591	AGUGGUU	ENSMUST00000112990.1|Mid2|ENSMUSG00000000266.5|midline 2 	ENSMUST00000112988.1|Mid2|ENSMUSG00000000266.5|midline 2
mm10_v2_chr13_+_111686178_111686210	0.135619	AGUGGUU	ENSMUST00000109272.2|Mier3|ENSMUSG00000032727.7|mesoderm induction early response 1, family member 3
mm10_v2_chr9_-_96631487_96631617	0.135496	AGUGGUU	ENSMUST00000128346.1|Rasa2|ENSMUSG00000032413.6|RAS p21 protein activator 2 	ENSMUST00000034984.6|Rasa2|ENSMUSG00000032413.6|RAS p21 protein activator 2
mm10_v2_chr14_+_58070547_58070547	0.132961	AGUGGUU	ENSMUST00000165526.1|Fgf9|ENSMUSG00000021974.8|fibroblast growth factor 9
mm10_v2_chr5_-_51553896_51553921	0.129585	AGUGGUU	ENSMUST00000132734.1|Ppargc1a|ENSMUSG00000029167.7|peroxisome proliferative activated receptor, gamma, coactivator 1 alpha
mm10_v2_chr8_+_105636509_105636589	0.12948	AGUGGUU	ENSMUST00000005841.9|Ctcf|ENSMUSG00000005698.9|CCCTC-binding factor
mm10_v2_chr2_-_137116624_137116644	0.129445	AGUGGUU	ENSMUST00000028735.7|Jag1|ENSMUSG00000027276.7|jagged 1
mm10_v2_chr4_+_120588728_120588745	0.128857	AGUGGUU	ENSMUST00000171482.1|Gm8439|ENSMUSG00000091297.1|predicted gene 8439
mm10_v2_chr5_-_3803081_3803119	0.128245	AGUGGUU	ENSMUST00000043551.6|Ankib1|ENSMUSG00000040351.7|ankyrin repeat and IBR domain containing 1
mm10_v2_chr3_+_129199919_129199943	0.127997	AGUGGUU	ENSMUST00000029657.9|Pitx2|ENSMUSG00000028023.10|paired-like homeodomain transcription factor 2 	ENSMUST00000106382.4|Pitx2|ENSMUSG00000028023.10|paired-like homeodomain transcription factor 2
mm10_v2_chr2_-_125506385_125506408	0.126448	AGUGGUU	ENSMUST00000028633.6|Fbn1|ENSMUSG00000027204.7|fibrillin 1
mm10_v2_chr2_+_133552159_133552237	0.125811	AGUGGUU	ENSMUST00000028836.6|Bmp2|ENSMUSG00000027358.6|bone morphogenetic protein 2
mm10_v2_chr9_-_75559604_75559665	0.124114	AGUGGUU	ENSMUST00000072232.7|Tmod3|ENSMUSG00000058587.7|tropomodulin 3
mm10_v2_chr6_-_35539765_35539888	0.122528	AGUGGUU	ENSMUST00000031866.5|Mtpn|ENSMUSG00000029840.5|myotrophin
mm10_v2_chr10_-_30600662_30600749	0.121491	AGUGGUU	ENSMUST00000019927.6|Trmt11|ENSMUSG00000019792.7|tRNA methyltransferase 11
mm10_v2_chr18_-_38601268_38601355	0.120756	AGUGGUU	ENSMUST00000025295.6|Spry4|ENSMUSG00000024427.6|sprouty homolog 4 (Drosophila)
mm10_v2_chr13_+_13437602_13437602	0.117559	AGUGGUU	ENSMUST00000005532.7|Nid1|ENSMUSG00000005397.7|nidogen 1
mm10_v2_chr3_-_116662643_116662677	0.116643	AGUGGUU	ENSMUST00000029570.5|Hiat1|ENSMUSG00000089911.1|hippocampus abundant gene transcript 1
mm10_v2_chr4_+_57637816_57637846	0.116557	AGUGGUU	ENSMUST00000150412.1|Gm20459|ENSMUSG00000089945.4|predicted gene 20459
mm10_v2_chr4_+_129136948_129136999	0.113456	AGUGGUU	ENSMUST00000102600.3|Fndc5|ENSMUSG00000001334.9|fibronectin type III domain containing 5
mm10_v2_chr11_-_86357570_86357614	0.111349	AGUGGUU	ENSMUST00000043624.8|Med13|ENSMUSG00000034297.8|mediator complex subunit 13
mm10_v2_chr2_+_131491764_131491943	0.107539	AGUGGUU	ENSMUST00000028806.5|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110179.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110189.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110182.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110183.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110186.2|Smox|ENSMUSG00000027333.12|spermine oxidase 	ENSMUST00000110188.1|Smox|ENSMUSG00000027333.12|spermine oxidase
mm10_v2_chr7_+_98835104_98835131	0.1066	AGUGGUU	ENSMUST00000165122.1|Wnt11|ENSMUSG00000015957.5|wingless-related MMTV integration site 11 	ENSMUST00000067495.2|Wnt11|ENSMUSG00000015957.5|wingless-related MMTV integration site 11
mm10_v2_chr4_+_109280266_109280315	0.099349	AGUGGUU	ENSMUST00000102729.3|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr7_-_65371210_65371287	0.0981795	AGUGGUU	ENSMUST00000102592.3|Tjp1|ENSMUSG00000030516.8|tight junction protein 1
mm10_v2_chr12_+_71831064_71831178	0.0976677	AGUGGUU	ENSMUST00000085299.2|Daam1|ENSMUSG00000034574.9|dishevelled associated activator of morphogenesis 1
mm10_v2_chr3_+_146121655_146121683	0.0971552	AGUGGUU	ENSMUST00000039450.4|Mcoln3|ENSMUSG00000036853.4|mucolipin 3
mm10_v2_chr10_+_67537861_67537930	0.0965761	AGUGGUU	ENSMUST00000048289.7|Egr2|ENSMUSG00000037868.9|early growth response 2 	ENSMUST00000105438.2|Egr2|ENSMUSG00000037868.9|early growth response 2 	ENSMUST00000130933.1|Egr2|ENSMUSG00000037868.9|early growth response 2 	ENSMUST00000146986.1|Egr2|ENSMUSG00000037868.9|early growth response 2
mm10_v2_chr5_-_140649018_140649052	0.0946201	AGUGGUU	ENSMUST00000042661.3|Ttyh3|ENSMUSG00000036565.3|tweety homolog 3 (Drosophila)
mm10_v2_chr17_+_53566971_53567023	0.0938875	AGUGGUU	ENSMUST00000000724.8|Kat2b|ENSMUSG00000000708.8|K(lysine) acetyltransferase 2B
mm10_v2_chr6_+_14901344_14901364	0.0934781	AGUGGUU	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr16_-_45844303_45844381	0.093242	AGUGGUU	ENSMUST00000036355.6|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chr7_+_27258725_27258815	0.0929459	AGUGGUU	ENSMUST00000079258.6|Numbl|ENSMUSG00000063160.6|numb-like
mm10_v2_chr9_-_45984816_45984871	0.0915079	AGUGGUU	ENSMUST00000172450.1|Pafah1b2|ENSMUSG00000003131.6|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm10_v2_chr3_+_122245557_122245578	0.0909327	AGUGGUU	ENSMUST00000029769.7|Gclm|ENSMUSG00000028124.9|glutamate-cysteine ligase, modifier subunit
mm10_v2_chr14_+_20929416_20929451	0.0908214	AGUGGUU	ENSMUST00000022369.7|Vcl|ENSMUSG00000021823.9|vinculin
mm10_v2_chrX_-_164076100_164076150	0.0902565	AGUGGUU	ENSMUST00000037928.2|Siah1b|ENSMUSG00000040749.5|seven in absentia 1B 	ENSMUST00000071667.2|Siah1b|ENSMUSG00000040749.5|seven in absentia 1B
mm10_v2_chr10_+_42678890_42678948	0.0888193	AGUGGUU	ENSMUST00000040718.5|Ostm1|ENSMUSG00000038280.6|osteopetrosis associated transmembrane protein 1
mm10_v2_chr9_-_86571775_86571847	0.0887897	AGUGGUU	ENSMUST00000070064.4|Pgm3|ENSMUSG00000056131.7|phosphoglucomutase 3 	ENSMUST00000072585.6|Pgm3|ENSMUSG00000056131.7|phosphoglucomutase 3
mm10_v2_chr19_-_10203880_10204169	0.0840319	AGUGGUU	ENSMUST00000142241.1|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1 	ENSMUST00000116542.2|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1 	ENSMUST00000025651.5|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1 	ENSMUST00000156291.1|Fen1|ENSMUSG00000024742.9|flap structure specific endonuclease 1
mm10_v2_chr14_+_31019125_31019157	0.0822335	AGUGGUU	ENSMUST00000112095.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000112098.3|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000112106.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000146325.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1
mm10_v2_chr12_-_91590009_91590056	0.0803539	AGUGGUU	ENSMUST00000021345.6|Gtf2a1|ENSMUSG00000020962.7|general transcription factor II A, 1
mm10_v2_chr2_-_156180135_156180238	0.0802057	AGUGGUU	ENSMUST00000126992.1|Rbm39|ENSMUSG00000027620.10|RNA binding motif protein 39 	ENSMUST00000146288.1|Rbm39|ENSMUSG00000027620.10|RNA binding motif protein 39 	ENSMUST00000029149.6|Rbm39|ENSMUSG00000027620.10|RNA binding motif protein 39 	ENSMUST00000109587.2|Rbm39|ENSMUSG00000027620.10|RNA binding motif protein 39 	ENSMUST00000109584.1|Rbm39|ENSMUSG00000027620.10|RNA binding motif protein 39
mm10_v2_chr17_+_88440711_88440741	0.0784829	AGUGGUU	ENSMUST00000112238.2|Foxn2|ENSMUSG00000034998.12|forkhead box N2 	ENSMUST00000155640.1|Foxn2|ENSMUSG00000034998.12|forkhead box N2
mm10_v2_chr8_+_107293463_107293483	0.0748032	AGUGGUU	ENSMUST00000169453.1|Nfat5|ENSMUSG00000003847.10|nuclear factor of activated T cells 5
mm10_v2_chr8_-_25016743_25016877	0.0737148	AGUGGUU	ENSMUST00000084032.5|Adam9|ENSMUSG00000031555.7|a disintegrin and metallopeptidase domain 9 (meltrin gamma)
mm10_v2_chr11_+_105589970_105590028	0.0717354	AGUGGUU	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chr18_+_56707725_56707940	0.0647578	AGUGGUU	ENSMUST00000025486.8|Lmnb1|ENSMUSG00000024590.8|lamin B1
mm10_v2_chrX_-_95444789_95444872	0.0606951	AGUGGUU	ENSMUST00000084535.5|Amer1|ENSMUSG00000050332.7|APC membrane recruitment 1
mm10_v2_chr6_-_121003099_121003153	0.0551454	AGUGGUU	ENSMUST00000098457.2|Mical3|ENSMUSG00000051586.8|microtubule associated monooxygenase, calponin and LIM domain containing 3 	ENSMUST00000150503.1|Mical3|ENSMUSG00000051586.8|microtubule associated monooxygenase, calponin and LIM domain containing 3
mm10_v2_chr15_+_73723131_73723151	0.0543699	AGUGGUU	ENSMUST00000165541.1|Ptp4a3|ENSMUSG00000059895.6|protein tyrosine phosphatase 4a3 	ENSMUST00000167582.1|Ptp4a3|ENSMUSG00000059895.6|protein tyrosine phosphatase 4a3
mm10_v2_chr7_+_67952817_67952859	0.0515124	AGUGGUU	ENSMUST00000005671.8|Igf1r|ENSMUSG00000005533.9|insulin-like growth factor I receptor
mm10_v2_chr15_-_77842133_77842175	0.0501606	AGUGGUU	ENSMUST00000016771.6|Myh9|ENSMUSG00000022443.10|myosin, heavy polypeptide 9, non-muscle
mm10_v2_chr5_+_32611171_32611245	0.0491204	AGUGGUU	ENSMUST00000072311.6|Yes1|ENSMUSG00000014932.9|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1 	ENSMUST00000168707.2|Yes1|ENSMUSG00000014932.9|Yamaguchi sarcoma viral (v-yes) oncogene homolog 1
mm10_v2_chr12_-_69198419_69198429	0.048972	AGUGGUU	ENSMUST00000021356.5|Dnaaf2|ENSMUSG00000020973.7|dynein, axonemal assembly factor 2
mm10_v2_chr7_-_111082997_111083037	0.0465767	AGUGGUU	ENSMUST00000161051.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000160132.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000106666.3|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000162415.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2
mm10_v2_chr11_-_78697370_78697475	0.0452768	AGUGGUU	ENSMUST00000142739.1|Nlk|ENSMUSG00000017376.9|nemo like kinase
mm10_v2_chr11_-_62648458_62648523	0.0450527	AGUGGUU	ENSMUST00000057194.8|Fam211a|ENSMUSG00000046417.8|family with sequence similarity 211, member A
mm10_v2_chr15_-_97831460_97831519	0.0438887	AGUGGUU	ENSMUST00000079838.7|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7 	ENSMUST00000118294.1|Hdac7|ENSMUSG00000022475.12|histone deacetylase 7
mm10_v2_chr4_-_134287215_134287258	0.0414122	AGUGGUU	ENSMUST00000145006.1|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000105877.2|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000127857.1|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000105876.2|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like
mm10_v2_chr5_+_122284365_122284397	0.0412039	AGUGGUU	ENSMUST00000053426.8|Pptc7|ENSMUSG00000038582.9|PTC7 protein phosphatase homolog (S. cerevisiae)
mm10_v2_chr12_+_80518990_80519087	0.0403547	AGUGGUU	ENSMUST00000021558.6|Galnt16|ENSMUSG00000021130.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16
mm10_v2_chr19_+_29522263_29522341	0.0392638	AGUGGUU	ENSMUST00000043610.6|C030046E11Rik|ENSMUSG00000038658.9|RIKEN cDNA C030046E11 gene 	ENSMUST00000162184.1|C030046E11Rik|ENSMUSG00000038658.9|RIKEN cDNA C030046E11 gene
mm10_v2_chr7_-_119895697_119895752	0.0381267	AGUGGUU	ENSMUST00000059851.6|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr16_-_46496955_46496986	0.036669	AGUGGUU	ENSMUST00000023335.6|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3 	ENSMUST00000023334.8|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3
mm10_v2_chr14_-_66868572_66868688	0.0363781	AGUGGUU	ENSMUST00000022629.8|Dpysl2|ENSMUSG00000022048.8|dihydropyrimidinase-like 2
mm10_v2_chr7_+_112679314_112679325	0.0318649	AGUGGUU	ENSMUST00000084705.5|Tead1|ENSMUSG00000055320.10|TEA domain family member 1 	ENSMUST00000059768.10|Tead1|ENSMUSG00000055320.10|TEA domain family member 1
mm10_v2_chr15_-_28025834_28025879	0.0293564	AGUGGUU	ENSMUST00000090247.5|Trio|ENSMUSG00000022263.9|triple functional domain (PTPRF interacting)
mm10_v2_chr9_-_106789130_106789213	0.0274673	AGUGGUU	ENSMUST00000046502.5|Rad54l2|ENSMUSG00000040661.5|RAD54 like 2 (S. cerevisiae)
mm10_v2_chr13_+_113794505_113794572	0.0271859	AGUGGUU	ENSMUST00000091201.6|Arl15|ENSMUSG00000042348.9|ADP-ribosylation factor-like 15
mm10_v2_chr12_-_4477138_4477196	0.0270471	AGUGGUU	ENSMUST00000085814.3|Ncoa1|ENSMUSG00000020647.9|nuclear receptor coactivator 1
mm10_v2_chr14_+_54883377_54883507	0.0269065	AGUGGUU	ENSMUST00000022806.3|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000134077.1|Gm20521|ENSMUSG00000092232.1|predicted gene 20521 	ENSMUST00000172844.1|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000133397.2|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2
mm10_v2_chr15_-_58076183_58076245	0.0236157	AGUGGUU	ENSMUST00000177504.2|9130401M01Rik|ENSMUSG00000022362.7|RIKEN cDNA 9130401M01 gene 	ENSMUST00000176076.1|9130401M01Rik|ENSMUSG00000022362.7|RIKEN cDNA 9130401M01 gene 	ENSMUST00000177176.1|9130401M01Rik|ENSMUSG00000022362.7|RIKEN cDNA 9130401M01 gene 	ENSMUST00000177276.1|Zhx1|ENSMUSG00000022361.8|zinc fingers and homeoboxes 1 	ENSMUST00000175805.2|Zhx1|ENSMUSG00000022361.8|zinc fingers and homeoboxes 1
mm10_v2_chrX_-_101222426_101222563	0.0228756	AGUGGUU	ENSMUST00000120389.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000156473.1|Snx12|ENSMUSG00000046032.10|sorting nexin 12 	ENSMUST00000077876.3|Snx12|ENSMUSG00000046032.10|sorting nexin 12
mm10_v2_chr9_-_59486610_59486621	0.0212685	AGUGGUU	ENSMUST00000171975.1|Arih1|ENSMUSG00000025234.5|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
mm10_v2_chr7_+_45434833_45434871	0.0191849	AGUGGUU	ENSMUST00000003964.8|Gys1|ENSMUSG00000003865.8|glycogen synthase 1, muscle
mm10_v2_chr2_+_145903234_145903300	0.0189545	AGUGGUU	ENSMUST00000110000.1|Naa20|ENSMUSG00000002728.8|N(alpha)-acetyltransferase 20, NatB catalytic subunit 	ENSMUST00000002805.7|Naa20|ENSMUSG00000002728.8|N(alpha)-acetyltransferase 20, NatB catalytic subunit 	ENSMUST00000169732.1|Naa20|ENSMUSG00000002728.8|N(alpha)-acetyltransferase 20, NatB catalytic subunit 	ENSMUST00000134759.2|Naa20|ENSMUSG00000002728.8|N(alpha)-acetyltransferase 20, NatB catalytic subunit
mm10_v2_chr19_+_40831248_40831292	0.0189033	AGUGGUU	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr16_-_75766758_75766821	0.0178688	AGUGGUU	ENSMUST00000114244.1|Hspa13|ENSMUSG00000032932.8|heat shock protein 70 family, member 13 	ENSMUST00000046283.8|Hspa13|ENSMUSG00000032932.8|heat shock protein 70 family, member 13
mm10_v2_chr5_-_67427794_67427813	0.0161526	AGUGGUU	ENSMUST00000169190.1|Bend4|ENSMUSG00000092060.1|BEN domain containing 4
mm10_v2_chr5_+_75152274_75152297	0.0144744	AGUGGUU	ENSMUST00000000476.8|Pdgfra|ENSMUSG00000029231.9|platelet derived growth factor receptor, alpha polypeptide
mm10_v2_chr2_-_152831665_152831735	0.0124877	AGUGGUU	ENSMUST00000156688.1|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1 	ENSMUST00000007803.5|Bcl2l1|ENSMUSG00000007659.12|BCL2-like 1
mm10_v2_chr7_-_89517576_89517587	0.0112442	AGUGGUU	ENSMUST00000041761.5|Prss23|ENSMUSG00000039405.6|protease, serine, 23
mm10_v2_chr19_+_18713192_18713212	0.0101814	AGUGGUU	ENSMUST00000062753.2|D030056L22Rik|ENSMUSG00000047044.7|RIKEN cDNA D030056L22 gene
mm10_v2_chr1_+_64690443_64690467	0.00990789	AGUGGUU	ENSMUST00000114077.1|Ccnyl1|ENSMUSG00000070871.4|cyclin Y-like 1
mm10_v2_chr2_+_90940397_90940543	0.00897039	AGUGGUU	ENSMUST00000068726.6|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000005643.7|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000177642.1|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000111451.3|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000068747.7|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1
mm10_v2_chr7_+_4119525_4119555	0.00326352	AGUGGUU	ENSMUST00000119661.1|Ttyh1|ENSMUSG00000030428.10|tweety homolog 1 (Drosophila) 	ENSMUST00000129423.1|Ttyh1|ENSMUSG00000030428.10|tweety homolog 1 (Drosophila)
mm10_v2_chr4_+_123201503_123201529	0.000488749	AGUGGUU	ENSMUST00000068262.5|Nt5c1a|ENSMUSG00000054958.6|5'-nucleotidase, cytosolic IA
mm10_v2_chr7_-_84086494_84086509	0.000354161	AGUGGUU	ENSMUST00000064174.5|9930013L23Rik|ENSMUSG00000052353.7|RIKEN cDNA 9930013L23 gene
