mm10_v2_chr5_-_53213447_53213473	3.07736	AGUGCAA	ENSMUST00000031090.6|Sel1l3|ENSMUSG00000029189.6|sel-1 suppressor of lin-12-like 3 (C. elegans)
mm10_v2_chr18_-_10706688_10706771	2.23697	AGUGCAA	ENSMUST00000002549.7|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3 	ENSMUST00000117726.1|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3 	ENSMUST00000117828.1|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3
mm10_v2_chr7_-_81454751_81454764	2.00407	AGUGCAA	ENSMUST00000098331.3|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1 	ENSMUST00000178892.1|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1
mm10_v2_chr2_+_23068168_23068241	1.86944	AGUGCAA	ENSMUST00000028121.7|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000114523.2|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000144088.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr2_+_71981184_71981287	1.8085	AGUGCAA	ENSMUST00000090826.5|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4 	ENSMUST00000102698.3|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4
mm10_v2_chr11_-_87987528_87987537	1.72456	AGUGCAA	ENSMUST00000020775.2|Dynll2|ENSMUSG00000020483.8|dynein light chain LC8-type 2
mm10_v2_chr11_-_61855026_61855073	1.6541	AGUGCAA	ENSMUST00000004920.3|Ulk2|ENSMUSG00000004798.8|unc-51 like kinase 2
mm10_v2_chr9_+_77754526_77754541	1.64122	AGUGCAA	ENSMUST00000034905.8|Gclc|ENSMUSG00000032350.8|glutamate-cysteine ligase, catalytic subunit
mm10_v2_chr13_-_92131494_92131680	1.6309	AGUGCAA	ENSMUST00000099326.3|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2 	ENSMUST00000146492.1|Rasgrf2|ENSMUSG00000021708.10|RAS protein-specific guanine nucleotide-releasing factor 2
mm10_v2_chr8_+_128359065_128359085	1.59262	AGUGCAA	ENSMUST00000026917.8|Nrp1|ENSMUSG00000025810.8|neuropilin 1
mm10_v2_chr17_+_73107982_73108080	1.52431	AGUGCAA	ENSMUST00000130574.1|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1 	ENSMUST00000149064.1|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1 	ENSMUST00000067545.6|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1
mm10_v2_chr6_-_59024470_59024549	1.46531	AGUGCAA	ENSMUST00000089860.5|Fam13a|ENSMUSG00000037709.7|family with sequence similarity 13, member A
mm10_v2_chr5_-_151190154_151190269	1.43869	AGUGCAA	ENSMUST00000062015.8|Stard13|ENSMUSG00000016128.8|StAR-related lipid transfer (START) domain containing 13 	ENSMUST00000110483.2|Stard13|ENSMUSG00000016128.8|StAR-related lipid transfer (START) domain containing 13
mm10_v2_chr4_-_114987220_114987256	1.35881	AGUGCAA	ENSMUST00000030491.8|Cmpk1|ENSMUSG00000028719.8|cytidine monophosphate (UMP-CMP) kinase 1
mm10_v2_chr11_-_50325599_50325673	1.33929	AGUGCAA	ENSMUST00000179865.1|Canx|ENSMUSG00000020368.9|calnexin 	ENSMUST00000020637.8|Canx|ENSMUSG00000020368.9|calnexin
mm10_v2_chr13_-_95891905_95891929	1.31857	AGUGCAA	ENSMUST00000068603.6|Iqgap2|ENSMUSG00000021676.9|IQ motif containing GTPase activating protein 2
mm10_v2_chr5_+_53998417_53998575	1.30186	AGUGCAA	ENSMUST00000117661.2|Stim2|ENSMUSG00000039156.13|stromal interaction molecule 2 	ENSMUST00000071083.7|Stim2|ENSMUSG00000039156.13|stromal interaction molecule 2
mm10_v2_chr14_+_30715599_30715641	1.2969	AGUGCAA	ENSMUST00000054230.4|Sfmbt1|ENSMUSG00000006527.8|Scm-like with four mbt domains 1
mm10_v2_chr5_+_30814571_30814641	1.23665	AGUGCAA	ENSMUST00000031058.8|Mapre3|ENSMUSG00000029166.8|microtubule-associated protein, RP/EB family, member 3
mm10_v2_chr5_-_62766153_62766246	1.23105	AGUGCAA	ENSMUST00000076623.4|Arap2|ENSMUSG00000037999.9|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm10_v2_chr14_-_45530118_45530182	1.21645	AGUGCAA	ENSMUST00000045905.6|Fermt2|ENSMUSG00000037712.9|fermitin family homolog 2 (Drosophila)
mm10_v2_chr8_+_88697022_88697033	1.19812	AGUGCAA	ENSMUST00000043526.8|Cyld|ENSMUSG00000036712.8|cylindromatosis (turban tumor syndrome)
mm10_v2_chr10_+_4611971_4612021	1.1945	AGUGCAA	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr6_+_115361221_115361280	1.18785	AGUGCAA	ENSMUST00000171644.1|Pparg|ENSMUSG00000000440.6|peroxisome proliferator activated receptor gamma
mm10_v2_chr6_-_119848120_119848168	1.17892	AGUGCAA	ENSMUST00000183703.1|Erc1|ENSMUSG00000030172.9|ELKS/RAB6-interacting/CAST family member 1 	ENSMUST00000183911.1|Erc1|ENSMUSG00000030172.9|ELKS/RAB6-interacting/CAST family member 1
mm10_v2_chr6_+_4600840_4600956	1.15268	AGUGCAA	ENSMUST00000015333.5|Casd1|ENSMUSG00000015189.6|CAS1 domain containing 1
mm10_v2_chrX_-_56598069_56598107	1.14379	AGUGCAA	ENSMUST00000059899.2|Mmgt1|ENSMUSG00000061273.3|membrane magnesium transporter 1
mm10_v2_chr2_+_49451486_49451559	1.13277	AGUGCAA	ENSMUST00000092123.4|Epc2|ENSMUSG00000069495.6|enhancer of polycomb homolog 2 (Drosophila)
mm10_v2_chr12_-_98577940_98578046	1.12868	AGUGCAA	ENSMUST00000110113.1|Kcnk10|ENSMUSG00000033854.9|potassium channel, subfamily K, member 10
mm10_v2_chr9_-_107231816_107231909	1.11475	AGUGCAA	ENSMUST00000044532.4|Dock3|ENSMUSG00000039716.6|dedicator of cyto-kinesis 3
mm10_v2_chr11_-_119547744_119547759	1.10547	AGUGCAA	ENSMUST00000026670.4|Nptx1|ENSMUSG00000025582.4|neuronal pentraxin 1
mm10_v2_chr3_-_115715031_115715062	1.06895	AGUGCAA	ENSMUST00000055676.2|S1pr1|ENSMUSG00000045092.7|sphingosine-1-phosphate receptor 1
mm10_v2_chr5_-_123684289_123684379	1.05811	AGUGCAA	ENSMUST00000111564.1|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1 	ENSMUST00000063905.5|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1
mm10_v2_chrX_+_98149666_98149721	1.05613	AGUGCAA	ENSMUST00000052837.7|Ar|ENSMUSG00000046532.7|androgen receptor
mm10_v2_chr3_+_41555723_41555745	1.05423	AGUGCAA	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr3_+_86070915_86070915	1.04372	AGUGCAA	ENSMUST00000182666.1|Sh3d19|ENSMUSG00000028082.7|SH3 domain protein D19
mm10_v2_chr12_-_44210061_44210077	1.03571	AGUGCAA	ENSMUST00000015049.3|Dnajb9|ENSMUSG00000014905.3|DnaJ (Hsp40) homolog, subfamily B, member 9
mm10_v2_chr6_-_71440623_71440645	1.02987	AGUGCAA	ENSMUST00000002292.8|Rmnd5a|ENSMUSG00000002222.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm10_v2_chr13_+_64161862_64161910	1.01682	AGUGCAA	ENSMUST00000021929.8|Habp4|ENSMUSG00000021476.8|hyaluronic acid binding protein 4
mm10_v2_chr14_-_31830402_31830440	1.01645	AGUGCAA	ENSMUST00000014640.7|Ankrd28|ENSMUSG00000014496.7|ankyrin repeat domain 28
mm10_v2_chr13_-_103920508_103920572	1.01586	AGUGCAA	ENSMUST00000053927.5|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein 	ENSMUST00000091269.4|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein 	ENSMUST00000022222.5|Erbb2ip|ENSMUSG00000021709.8|Erbb2 interacting protein
mm10_v2_chr4_+_11156411_11156453	0.970721	AGUGCAA	ENSMUST00000029865.3|Trp53inp1|ENSMUSG00000028211.5|transformation related protein 53 inducible nuclear protein 1
mm10_v2_chr5_-_76304474_76304548	0.966023	AGUGCAA	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chrX_-_104413825_104413856	0.952955	AGUGCAA	ENSMUST00000033695.5|Abcb7|ENSMUSG00000031333.7|ATP-binding cassette, sub-family B (MDR/TAP), member 7
mm10_v2_chr13_+_9276477_9276620	0.951118	AGUGCAA	ENSMUST00000174552.1|Dip2c|ENSMUSG00000048264.9|DIP2 disco-interacting protein 2 homolog C (Drosophila)
mm10_v2_chr15_+_25622525_25622558	0.947201	AGUGCAA	ENSMUST00000110457.1|Myo10|ENSMUSG00000022272.11|myosin X 	ENSMUST00000137601.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr17_-_15375969_15375983	0.940978	AGUGCAA	ENSMUST00000014917.7|Dll1|ENSMUSG00000014773.7|delta-like 1 (Drosophila)
mm10_v2_chr9_-_52168111_52168111	0.939088	AGUGCAA	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chrX_-_142390334_142390345	0.922312	AGUGCAA	ENSMUST00000112907.1|Acsl4|ENSMUSG00000031278.6|acyl-CoA synthetase long-chain family member 4
mm10_v2_chr18_+_84088077_84088178	0.922092	AGUGCAA	ENSMUST00000060223.2|Zadh2|ENSMUSG00000049090.2|zinc binding alcohol dehydrogenase, domain containing 2
mm10_v2_chr3_-_89387132_89387189	0.918428	AGUGCAA	ENSMUST00000107433.1|Zbtb7b|ENSMUSG00000028042.9|zinc finger and BTB domain containing 7B
mm10_v2_chrX_+_103356464_103356488	0.890253	AGUGCAA	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chr5_+_43233463_43233491	0.889392	AGUGCAA	ENSMUST00000169035.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2 	ENSMUST00000166713.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2
mm10_v2_chr6_+_50110186_50110383	0.872953	AGUGCAA	ENSMUST00000166318.1|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 	ENSMUST00000036236.8|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 	ENSMUST00000036225.8|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
mm10_v2_chr2_-_26092149_26092177	0.872697	AGUGCAA	ENSMUST00000114159.2|Nacc2|ENSMUSG00000026932.8|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm10_v2_chr16_+_42907563_42907684	0.866657	AGUGCAA	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr12_-_102704896_102704980	0.855642	AGUGCAA	ENSMUST00000178697.1|Itpk1|ENSMUSG00000057963.3|inositol 1,3,4-triphosphate 5/6 kinase 	ENSMUST00000046518.5|Itpk1|ENSMUSG00000057963.3|inositol 1,3,4-triphosphate 5/6 kinase
mm10_v2_chr4_+_97777606_97777632	0.8518	AGUGCAA	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr19_+_44931119_44931172	0.844633	AGUGCAA	ENSMUST00000096053.3|Fam178a|ENSMUSG00000036097.7|family with sequence similarity 178, member A
mm10_v2_chr6_-_134566913_134566995	0.844503	AGUGCAA	ENSMUST00000032322.8|Lrp6|ENSMUSG00000030201.9|low density lipoprotein receptor-related protein 6
mm10_v2_chr18_-_77565050_77565162	0.840827	AGUGCAA	ENSMUST00000182153.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182146.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000026494.7|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182024.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165
mm10_v2_chr14_+_11553523_11553542	0.83374	AGUGCAA	ENSMUST00000022264.6|Ptprg|ENSMUSG00000021745.7|protein tyrosine phosphatase, receptor type, G
mm10_v2_chr18_-_84086379_84086404	0.823553	AGUGCAA	ENSMUST00000060303.8|Tshz1|ENSMUSG00000046982.9|teashirt zinc finger family member 1
mm10_v2_chr2_-_132578155_132578233	0.816036	AGUGCAA	ENSMUST00000110136.1|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 	ENSMUST00000124107.1|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 	ENSMUST00000060955.5|Gpcpd1|ENSMUSG00000027346.9|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
mm10_v2_chr17_+_53479212_53479237	0.800892	AGUGCAA	ENSMUST00000017975.5|Rab5a|ENSMUSG00000017831.7|RAB5A, member RAS oncogene family
mm10_v2_chr11_+_52232009_52232041	0.79841	AGUGCAA	ENSMUST00000037324.5|Skp1a|ENSMUSG00000036309.8|S-phase kinase-associated protein 1A 	ENSMUST00000166537.1|Skp1a|ENSMUSG00000036309.8|S-phase kinase-associated protein 1A
mm10_v2_chr16_-_46496955_46496986	0.793765	AGUGCAA	ENSMUST00000023335.6|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3 	ENSMUST00000023334.8|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3
mm10_v2_chr11_-_88851462_88851522	0.783222	AGUGCAA	ENSMUST00000107903.1|Akap1|ENSMUSG00000018428.9|A kinase (PRKA) anchor protein 1
mm10_v2_chr5_-_3803081_3803119	0.781683	AGUGCAA	ENSMUST00000043551.6|Ankib1|ENSMUSG00000040351.7|ankyrin repeat and IBR domain containing 1
mm10_v2_chr2_+_28641227_28641262	0.778876	AGUGCAA	ENSMUST00000028155.5|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1 	ENSMUST00000113869.1|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1 	ENSMUST00000113867.2|Tsc1|ENSMUSG00000026812.10|tuberous sclerosis 1
mm10_v2_chr5_-_148552783_148552843	0.766022	AGUGCAA	ENSMUST00000079324.7|Ubl3|ENSMUSG00000001687.9|ubiquitin-like 3 	ENSMUST00000164904.1|Ubl3|ENSMUSG00000001687.9|ubiquitin-like 3
mm10_v2_chr15_-_39112642_39112716	0.759939	AGUGCAA	ENSMUST00000022908.8|Slc25a32|ENSMUSG00000022299.8|solute carrier family 25, member 32
mm10_v2_chrX_+_99821021_99821021	0.757712	AGUGCAA	ENSMUST00000096363.2|Tmem28|ENSMUSG00000071719.2|transmembrane protein 28
mm10_v2_chr4_+_47353222_47353265	0.752008	AGUGCAA	ENSMUST00000007757.8|Tgfbr1|ENSMUSG00000007613.9|transforming growth factor, beta receptor I
mm10_v2_chr10_-_8886033_8886076	0.751175	AGUGCAA	ENSMUST00000015449.5|Sash1|ENSMUSG00000015305.5|SAM and SH3 domain containing 1
mm10_v2_chr3_-_84582476_84582534	0.750107	AGUGCAA	ENSMUST00000107687.2|Arfip1|ENSMUSG00000074513.3|ADP-ribosylation factor interacting protein 1 	ENSMUST00000098990.3|Arfip1|ENSMUSG00000074513.3|ADP-ribosylation factor interacting protein 1
mm10_v2_chr16_-_28929658_28929698	0.74917	AGUGCAA	ENSMUST00000100023.1|Mb21d2|ENSMUSG00000051065.8|Mab-21 domain containing 2
mm10_v2_chr2_+_130906461_130906500	0.743881	AGUGCAA	ENSMUST00000028781.8|Atrn|ENSMUSG00000027312.8|attractin
mm10_v2_chr6_+_108213086_108213123	0.743808	AGUGCAA	ENSMUST00000032192.6|Itpr1|ENSMUSG00000030102.8|inositol 1,4,5-trisphosphate receptor 1
mm10_v2_chr17_-_45686214_45686265	0.733507	AGUGCAA	ENSMUST00000113523.2|Tmem63b|ENSMUSG00000036026.9|transmembrane protein 63b
mm10_v2_chr2_-_53191214_53191284	0.728473	AGUGCAA	ENSMUST00000076313.6|Prpf40a|ENSMUSG00000061136.7|PRP40 pre-mRNA processing factor 40 homolog A (yeast) 	ENSMUST00000125243.1|Prpf40a|ENSMUSG00000061136.7|PRP40 pre-mRNA processing factor 40 homolog A (yeast)
mm10_v2_chr11_+_97663366_97663414	0.728353	AGUGCAA	ENSMUST00000044730.5|Mllt6|ENSMUSG00000038437.5|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
mm10_v2_chrX_-_136868537_136868755	0.726773	AGUGCAA	ENSMUST00000058814.6|Rab9b|ENSMUSG00000043463.6|RAB9B, member RAS oncogene family
mm10_v2_chr8_-_121652895_121652913	0.725204	AGUGCAA	ENSMUST00000046386.4|Zcchc14|ENSMUSG00000061410.6|zinc finger, CCHC domain containing 14
mm10_v2_chr4_-_108780782_108780803	0.723486	AGUGCAA	ENSMUST00000106657.1|Zfyve9|ENSMUSG00000034557.8|zinc finger, FYVE domain containing 9
mm10_v2_chr2_+_18064564_18064644	0.723484	AGUGCAA	ENSMUST00000114671.1|Mllt10|ENSMUSG00000026743.10|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm10_v2_chrX_-_51018011_51018032	0.72013	AGUGCAA	ENSMUST00000053593.7|Rap2c|ENSMUSG00000050029.7|RAP2C, member of RAS oncogene family
mm10_v2_chr8_+_40511769_40511787	0.717212	AGUGCAA	ENSMUST00000098817.2|Vps37a|ENSMUSG00000031600.10|vacuolar protein sorting 37A (yeast)
mm10_v2_chr5_+_91074611_91074629	0.713633	AGUGCAA	ENSMUST00000031324.4|Ereg|ENSMUSG00000029377.4|epiregulin
mm10_v2_chr13_+_96542727_96542775	0.708911	AGUGCAA	ENSMUST00000077672.4|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 	ENSMUST00000109444.2|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm10_v2_chr10_+_115384951_115385021	0.700324	AGUGCAA	ENSMUST00000036044.8|Zfc3h1|ENSMUSG00000034163.10|zinc finger, C3H1-type containing
mm10_v2_chr19_+_38836561_38836612	0.699089	AGUGCAA	ENSMUST00000037302.5|Tbc1d12|ENSMUSG00000048720.7|TBC1D12: TBC1 domain family, member 12
mm10_v2_chr1_+_60181495_60181591	0.697983	AGUGCAA	ENSMUST00000160834.1|Nbeal1|ENSMUSG00000073664.5|neurobeachin like 1
mm10_v2_chr10_+_60277627_60277692	0.697261	AGUGCAA	ENSMUST00000105465.1|Psap|ENSMUSG00000004207.8|prosaposin 	ENSMUST00000177779.1|Psap|ENSMUSG00000004207.8|prosaposin 	ENSMUST00000179238.1|Psap|ENSMUSG00000004207.8|prosaposin 	ENSMUST00000004316.8|Psap|ENSMUSG00000004207.8|prosaposin
mm10_v2_chr15_-_81858317_81858328	0.696473	AGUGCAA	ENSMUST00000050467.7|Tob2|ENSMUSG00000048546.7|transducer of ERBB2, 2
mm10_v2_chr5_+_30232581_30232680	0.695385	AGUGCAA	ENSMUST00000145167.1|Ept1|ENSMUSG00000075703.9|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
mm10_v2_chr2_+_91457501_91457549	0.691152	AGUGCAA	ENSMUST00000028689.3|Lrp4|ENSMUSG00000027253.9|low density lipoprotein receptor-related protein 4
mm10_v2_chr17_+_74528279_74528295	0.68187	AGUGCAA	ENSMUST00000180037.1|Birc6|ENSMUSG00000024073.8|baculoviral IAP repeat-containing 6 	ENSMUST00000024879.6|Birc6|ENSMUSG00000024073.8|baculoviral IAP repeat-containing 6
mm10_v2_chr6_-_13677930_13677974	0.67119	AGUGCAA	ENSMUST00000045235.5|B630005N14Rik|ENSMUSG00000042742.5|RIKEN cDNA B630005N14 gene
mm10_v2_chr1_+_180726019_180726106	0.659374	AGUGCAA	ENSMUST00000027780.4|Acbd3|ENSMUSG00000026499.4|acyl-Coenzyme A binding domain containing 3
mm10_v2_chr2_+_152226839_152226908	0.659008	AGUGCAA	ENSMUST00000099224.3|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000124791.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000133119.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide
mm10_v2_chr19_+_32757497_32757587	0.657004	AGUGCAA	ENSMUST00000013807.7|Pten|ENSMUSG00000013663.7|phosphatase and tensin homolog
mm10_v2_chr7_-_119895697_119895752	0.650492	AGUGCAA	ENSMUST00000059851.6|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chr4_+_86748526_86748558	0.650407	AGUGCAA	ENSMUST00000082026.7|Dennd4c|ENSMUSG00000038024.11|DENN/MADD domain containing 4C 	ENSMUST00000045512.8|Dennd4c|ENSMUSG00000038024.11|DENN/MADD domain containing 4C
mm10_v2_chr19_+_60811574_60811619	0.645568	AGUGCAA	ENSMUST00000128357.1|Fam45a|ENSMUSG00000024993.9|family with sequence similarity 45, member A 	ENSMUST00000119633.1|Fam45a|ENSMUSG00000024993.9|family with sequence similarity 45, member A 	ENSMUST00000025957.8|Fam45a|ENSMUSG00000024993.9|family with sequence similarity 45, member A
mm10_v2_chr11_-_96916448_96916531	0.639552	AGUGCAA	ENSMUST00000103152.4|Cdk5rap3|ENSMUSG00000018669.8|CDK5 regulatory subunit associated protein 3
mm10_v2_chr4_-_22488296_22488366	0.637178	AGUGCAA	ENSMUST00000178174.1|Pou3f2|ENSMUSG00000095139.1|POU domain, class 3, transcription factor 2
mm10_v2_chr7_+_49910112_49910146	0.630497	AGUGCAA	ENSMUST00000056442.5|Slc6a5|ENSMUSG00000039728.8|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm10_v2_chrX_+_36328353_36328418	0.630166	AGUGCAA	ENSMUST00000016383.3|Lonrf3|ENSMUSG00000016239.5|LON peptidase N-terminal domain and ring finger 3
mm10_v2_chr14_-_26971232_26971232	0.628379	AGUGCAA	ENSMUST00000036570.4|Appl1|ENSMUSG00000040760.4|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
mm10_v2_chr10_-_78352323_78352459	0.626359	AGUGCAA	ENSMUST00000001240.5|Agpat3|ENSMUSG00000001211.8|1-acylglycerol-3-phosphate O-acyltransferase 3
mm10_v2_chrX_-_122397351_122397425	0.62321	AGUGCAA	ENSMUST00000079490.4|Nap1l3|ENSMUSG00000055733.5|nucleosome assembly protein 1-like 3
mm10_v2_chr17_-_66519666_66519727	0.622528	AGUGCAA	ENSMUST00000167962.1|Rab12|ENSMUSG00000023460.6|RAB12, member RAS oncogene family 	ENSMUST00000070538.4|Rab12|ENSMUSG00000023460.6|RAB12, member RAS oncogene family
mm10_v2_chr12_+_111574491_111574542	0.610331	AGUGCAA	ENSMUST00000084953.5|Mark3|ENSMUSG00000007411.9|MAP/microtubule affinity-regulating kinase 3 	ENSMUST00000075281.6|Mark3|ENSMUSG00000007411.9|MAP/microtubule affinity-regulating kinase 3
mm10_v2_chr19_-_12796108_12796146	0.60797	AGUGCAA	ENSMUST00000038627.8|Zfp91|ENSMUSG00000024695.9|zinc finger protein 91
mm10_v2_chr14_-_78536762_78536851	0.604917	AGUGCAA	ENSMUST00000123853.1|Akap11|ENSMUSG00000022016.9|A kinase (PRKA) anchor protein 11
mm10_v2_chr1_+_118627943_118627951	0.596962	AGUGCAA	ENSMUST00000027629.8|Tfcp2l1|ENSMUSG00000026380.9|transcription factor CP2-like 1
mm10_v2_chr4_-_126533472_126533613	0.596728	AGUGCAA	ENSMUST00000084289.4|Ago4|ENSMUSG00000042500.11|argonaute RISC catalytic subunit 4
mm10_v2_chr2_+_30364227_30364260	0.593596	AGUGCAA	ENSMUST00000077977.7|Fam73b|ENSMUSG00000026858.12|family with sequence similarity 73, member B 	ENSMUST00000140075.2|Fam73b|ENSMUSG00000026858.12|family with sequence similarity 73, member B
mm10_v2_chr11_-_20831009_20831056	0.59278	AGUGCAA	ENSMUST00000047028.8|Lgalsl|ENSMUSG00000042363.8|lectin, galactoside binding-like
mm10_v2_chr2_-_167349167_167349249	0.58588	AGUGCAA	ENSMUST00000109221.2|B4galt5|ENSMUSG00000017929.7|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5
mm10_v2_chr3_+_102010138_102010171	0.585487	AGUGCAA	ENSMUST00000066187.4|Nhlh2|ENSMUSG00000048540.7|nescient helix loop helix 2
mm10_v2_chr2_+_57237651_57237729	0.583919	AGUGCAA	ENSMUST00000169687.1|Gpd2|ENSMUSG00000026827.6|glycerol phosphate dehydrogenase 2, mitochondrial
mm10_v2_chr8_+_46471041_46471078	0.583493	AGUGCAA	ENSMUST00000034046.5|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1
mm10_v2_chr16_-_96082389_96082481	0.57874	AGUGCAA	ENSMUST00000099502.2|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000023631.8|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000113829.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000153398.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1
mm10_v2_chr8_-_36613937_36613948	0.571239	AGUGCAA	ENSMUST00000033923.7|Dlc1|ENSMUSG00000031523.10|deleted in liver cancer 1
mm10_v2_chr6_-_24664960_24665038	0.568549	AGUGCAA	ENSMUST00000041737.7|Wasl|ENSMUSG00000029684.8|Wiskott-Aldrich syndrome-like (human) 	ENSMUST00000031695.8|Wasl|ENSMUSG00000029684.8|Wiskott-Aldrich syndrome-like (human)
mm10_v2_chr11_-_90390895_90390926	0.55543	AGUGCAA	ENSMUST00000004051.7|Hlf|ENSMUSG00000003949.10|hepatic leukemia factor
mm10_v2_chr4_-_94603239_94603253	0.553234	AGUGCAA	ENSMUST00000107107.2|Plaa|ENSMUSG00000028577.7|phospholipase A2, activating protein
mm10_v2_chr1_+_105663855_105663866	0.551313	AGUGCAA	ENSMUST00000086721.3|2310035C23Rik|ENSMUSG00000026319.7|RIKEN cDNA 2310035C23 gene 	ENSMUST00000039173.6|2310035C23Rik|ENSMUSG00000026319.7|RIKEN cDNA 2310035C23 gene
mm10_v2_chr1_-_52727457_52727474	0.540264	AGUGCAA	ENSMUST00000156876.1|Mfsd6|ENSMUSG00000041439.9|major facilitator superfamily domain containing 6 	ENSMUST00000087701.3|Mfsd6|ENSMUSG00000041439.9|major facilitator superfamily domain containing 6
mm10_v2_chr7_+_112023469_112023566	0.539066	AGUGCAA	ENSMUST00000106653.2|Usp47|ENSMUSG00000059263.7|ubiquitin specific peptidase 47
mm10_v2_chr4_+_53440516_53440684	0.537805	AGUGCAA	ENSMUST00000107651.2|Slc44a1|ENSMUSG00000028412.11|solute carrier family 44, member 1 	ENSMUST00000107647.1|Slc44a1|ENSMUSG00000028412.11|solute carrier family 44, member 1
mm10_v2_chr2_+_136713444_136713492	0.537437	AGUGCAA	ENSMUST00000028727.4|Snap25|ENSMUSG00000027273.7|synaptosomal-associated protein 25 	ENSMUST00000110098.3|Snap25|ENSMUSG00000027273.7|synaptosomal-associated protein 25
mm10_v2_chr4_-_141139727_141139772	0.517314	AGUGCAA	ENSMUST00000148204.1|Szrd1|ENSMUSG00000040842.11|SUZ RNA binding domain containing 1 	ENSMUST00000102487.3|Szrd1|ENSMUSG00000040842.11|SUZ RNA binding domain containing 1
mm10_v2_chr5_-_96161990_96162097	0.516722	AGUGCAA	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr7_+_132859225_132859266	0.516504	AGUGCAA	ENSMUST00000084497.5|Fam175b|ENSMUSG00000030965.12|family with sequence similarity 175, member B 	ENSMUST00000181577.1|Fam175b|ENSMUSG00000030965.12|family with sequence similarity 175, member B 	ENSMUST00000106161.1|Fam175b|ENSMUSG00000030965.12|family with sequence similarity 175, member B
mm10_v2_chr1_+_177444653_177444669	0.513521	AGUGCAA	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr6_+_143167210_143167267	0.497909	AGUGCAA	ENSMUST00000032413.4|Etnk1|ENSMUSG00000030275.4|ethanolamine kinase 1
mm10_v2_chr13_-_64153194_64153207	0.494913	AGUGCAA	ENSMUST00000059817.4|Zfp367|ENSMUSG00000044934.6|zinc finger protein 367 	ENSMUST00000117241.1|Zfp367|ENSMUSG00000044934.6|zinc finger protein 367
mm10_v2_chr10_-_17947997_17948098	0.493025	AGUGCAA	ENSMUST00000037879.6|Heca|ENSMUSG00000039879.8|headcase homolog (Drosophila)
mm10_v2_chr2_-_64097994_64098023	0.484773	AGUGCAA	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr4_+_102254993_102255003	0.481905	AGUGCAA	ENSMUST00000106908.2|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr6_-_114921778_114921837	0.481811	AGUGCAA	ENSMUST00000032459.7|Vgll4|ENSMUSG00000030315.9|vestigial like 4 (Drosophila)
mm10_v2_chr19_-_3575708_3575756	0.474042	AGUGCAA	ENSMUST00000113997.2|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000025846.8|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000172362.1|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3
mm10_v2_chr13_+_12565868_12565883	0.466624	AGUGCAA	ENSMUST00000071973.6|Ero1lb|ENSMUSG00000057069.6|ERO1-like beta (S. cerevisiae)
mm10_v2_chr4_-_53159885_53159900	0.465439	AGUGCAA	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr13_-_45964964_45965001	0.457711	AGUGCAA	ENSMUST00000180110.1|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000091628.3|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000167708.2|Atxn1|ENSMUSG00000046876.9|ataxin 1
mm10_v2_chr13_+_55693082_55693151	0.455724	AGUGCAA	ENSMUST00000057844.8|B230219D22Rik|ENSMUSG00000045767.8|RIKEN cDNA B230219D22 gene
mm10_v2_chr16_+_44139821_44139900	0.453442	AGUGCAA	ENSMUST00000159514.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000161326.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063520.8|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063542.7|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm10_v2_chr15_+_89253035_89253035	0.444953	AGUGCAA	ENSMUST00000088788.3|Ppp6r2|ENSMUSG00000036561.7|protein phosphatase 6, regulatory subunit 2
mm10_v2_chr13_+_81657732_81657846	0.440478	AGUGCAA	ENSMUST00000049055.6|Lysmd3|ENSMUSG00000035840.6|LysM, putative peptidoglycan-binding, domain containing 3
mm10_v2_chr2_-_23572038_23572112	0.438465	AGUGCAA	ENSMUST00000132484.1|Spopl|ENSMUSG00000026771.8|speckle-type POZ protein-like
mm10_v2_chr7_-_45717919_45718002	0.432517	AGUGCAA	ENSMUST00000107737.2|Sphk2|ENSMUSG00000057342.7|sphingosine kinase 2
mm10_v2_chr4_-_108833608_108833626	0.431242	AGUGCAA	ENSMUST00000102742.4|Btf3l4|ENSMUSG00000028568.10|basic transcription factor 3-like 4
mm10_v2_chr16_-_31275277_31275290	0.429158	AGUGCAA	ENSMUST00000060188.7|Ppp1r2|ENSMUSG00000047714.8|protein phosphatase 1, regulatory (inhibitor) subunit 2
mm10_v2_chr2_-_104816696_104816792	0.428021	AGUGCAA	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr19_+_3767397_3767523	0.427352	AGUGCAA	ENSMUST00000113974.4|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113972.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113973.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113977.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000052699.6|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113968.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr18_+_5591860_5591902	0.423897	AGUGCAA	ENSMUST00000025081.5|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1 	ENSMUST00000159390.1|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1
mm10_v2_chr10_+_20148920_20149014	0.423772	AGUGCAA	ENSMUST00000116259.3|Map7|ENSMUSG00000019996.10|microtubule-associated protein 7
mm10_v2_chr2_+_134786154_134786170	0.423752	AGUGCAA	ENSMUST00000110116.1|Plcb1|ENSMUSG00000051177.10|phospholipase C, beta 1
mm10_v2_chr1_+_172341197_172341217	0.422766	AGUGCAA	ENSMUST00000056136.3|Kcnj10|ENSMUSG00000044708.5|potassium inwardly-rectifying channel, subfamily J, member 10
mm10_v2_chr17_-_87446854_87446935	0.420616	AGUGCAA	ENSMUST00000040440.6|Calm2|ENSMUSG00000036438.6|calmodulin 2
mm10_v2_chr13_-_93499803_93499825	0.419727	AGUGCAA	ENSMUST00000065537.7|Jmy|ENSMUSG00000021690.9|junction-mediating and regulatory protein
mm10_v2_chr9_-_43105718_43105793	0.419468	AGUGCAA	ENSMUST00000165665.1|Arhgef12|ENSMUSG00000059495.7|Rho guanine nucleotide exchange factor (GEF) 12
mm10_v2_chr1_-_13589717_13589904	0.418059	AGUGCAA	ENSMUST00000027068.4|Tram1|ENSMUSG00000025935.4|translocating chain-associating membrane protein 1
mm10_v2_chr9_+_44604844_44604921	0.415715	AGUGCAA	ENSMUST00000170489.1|Ddx6|ENSMUSG00000032097.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm10_v2_chr1_-_30949756_30949770	0.410086	AGUGCAA	ENSMUST00000076587.3|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1 	ENSMUST00000027232.7|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1
mm10_v2_chr12_-_51829525_51829553	0.407193	AGUGCAA	ENSMUST00000179265.1|Hectd1|ENSMUSG00000035247.9|HECT domain containing 1 	ENSMUST00000042052.8|Hectd1|ENSMUSG00000035247.9|HECT domain containing 1
mm10_v2_chr1_-_10232670_10232670	0.406643	AGUGCAA	ENSMUST00000088615.4|Arfgef1|ENSMUSG00000067851.5|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) 	ENSMUST00000131556.1|Arfgef1|ENSMUSG00000067851.5|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)
mm10_v2_chr8_+_76899772_76899828	0.406215	AGUGCAA	ENSMUST00000109913.2|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2
mm10_v2_chr12_-_54862783_54862921	0.405968	AGUGCAA	ENSMUST00000078124.7|Cfl2|ENSMUSG00000062929.7|cofilin 2, muscle
mm10_v2_chr4_-_35157404_35157500	0.40366	AGUGCAA	ENSMUST00000102975.3|Mob3b|ENSMUSG00000073910.4|MOB kinase activator 3B
mm10_v2_chr12_+_81859964_81860036	0.403174	AGUGCAA	ENSMUST00000021567.5|Pcnx|ENSMUSG00000021140.8|pecanex homolog (Drosophila)
mm10_v2_chr1_-_43827751_43827800	0.39836	AGUGCAA	ENSMUST00000128261.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000126008.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1 	ENSMUST00000139451.1|Uxs1|ENSMUSG00000057363.6|UDP-glucuronate decarboxylase 1
mm10_v2_chr4_-_132212255_132212303	0.395665	AGUGCAA	ENSMUST00000152796.1|Ythdf2|ENSMUSG00000040025.11|YTH domain family 2
mm10_v2_chr18_+_14783238_14783259	0.39218	AGUGCAA	ENSMUST00000169862.1|Taf4b|ENSMUSG00000054321.6|TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr9_+_31030621_31030700	0.389518	AGUGCAA	ENSMUST00000115222.2|Zbtb44|ENSMUSG00000047412.9|zinc finger and BTB domain containing 44
mm10_v2_chr6_+_117168535_117168584	0.389432	AGUGCAA	ENSMUST00000112866.1|Cxcl12|ENSMUSG00000061353.5|chemokine (C-X-C motif) ligand 12 	ENSMUST00000112871.1|Cxcl12|ENSMUSG00000061353.5|chemokine (C-X-C motif) ligand 12 	ENSMUST00000073043.4|Cxcl12|ENSMUSG00000061353.5|chemokine (C-X-C motif) ligand 12
mm10_v2_chr6_-_143947092_143947111	0.388234	AGUGCAA	ENSMUST00000144289.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000111748.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr9_+_109931458_109931488	0.385617	AGUGCAA	ENSMUST00000072772.5|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4 	ENSMUST00000035055.8|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4
mm10_v2_chr3_+_55112080_55112171	0.383612	AGUGCAA	ENSMUST00000044116.7|Spg20|ENSMUSG00000036580.9|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) 	ENSMUST00000107971.2|Spg20|ENSMUSG00000036580.9|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) 	ENSMUST00000118118.1|Spg20|ENSMUSG00000036580.9|spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
mm10_v2_chr4_-_138913915_138913983	0.380764	AGUGCAA	ENSMUST00000097830.3|Otud3|ENSMUSG00000041161.8|OTU domain containing 3
mm10_v2_chr2_-_157566319_157566361	0.380555	AGUGCAA	ENSMUST00000109528.2|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human) 	ENSMUST00000088494.2|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human)
mm10_v2_chr10_+_106470281_106470367	0.379709	AGUGCAA	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr13_+_56702983_56703112	0.378742	AGUGCAA	ENSMUST00000069557.7|Smad5|ENSMUSG00000021540.10|SMAD family member 5 	ENSMUST00000109876.1|Smad5|ENSMUSG00000021540.10|SMAD family member 5
mm10_v2_chr5_-_92083455_92083557	0.378106	AGUGCAA	ENSMUST00000169094.1|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2 	ENSMUST00000167918.1|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2
mm10_v2_chr18_+_36281069_36281151	0.374457	AGUGCAA	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr2_+_156196642_156196775	0.37031	AGUGCAA	ENSMUST00000037401.8|Phf20|ENSMUSG00000038116.10|PHD finger protein 20
mm10_v2_chr13_+_42052015_42052072	0.370082	AGUGCAA	ENSMUST00000060148.5|Hivep1|ENSMUSG00000021366.7|human immunodeficiency virus type I enhancer binding protein 1
mm10_v2_chr17_+_44078813_44078910	0.368169	AGUGCAA	ENSMUST00000154166.1|Enpp5|ENSMUSG00000023960.7|ectonucleotide pyrophosphatase/phosphodiesterase 5 	ENSMUST00000024756.4|Enpp5|ENSMUSG00000023960.7|ectonucleotide pyrophosphatase/phosphodiesterase 5
mm10_v2_chr1_+_59764264_59764286	0.368014	AGUGCAA	ENSMUST00000087435.5|Bmpr2|ENSMUSG00000067336.5|bone morphogenetic protein receptor, type II (serine/threonine kinase)
mm10_v2_chrX_-_162159717_162159732	0.365917	AGUGCAA	ENSMUST00000087085.3|Nhs|ENSMUSG00000059493.7|Nance-Horan syndrome (human)
mm10_v2_chr4_+_103114385_103114395	0.363755	AGUGCAA	ENSMUST00000106858.1|Mier1|ENSMUSG00000028522.10|mesoderm induction early response 1 homolog (Xenopus laevis
mm10_v2_chr5_-_102069905_102069940	0.35842	AGUGCAA	ENSMUST00000053177.7|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3 	ENSMUST00000174698.1|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3
mm10_v2_chr13_+_41606216_41606216	0.358021	AGUGCAA	ENSMUST00000129449.1|Tmem170b|ENSMUSG00000087370.2|transmembrane protein 170B
mm10_v2_chr12_-_3309912_3309975	0.352354	AGUGCAA	ENSMUST00000021001.8|Rab10|ENSMUSG00000020671.8|RAB10, member RAS oncogene family
mm10_v2_chr12_-_72408934_72409054	0.347619	AGUGCAA	ENSMUST00000078505.7|Rtn1|ENSMUSG00000021087.11|reticulon 1
mm10_v2_chr11_-_106920681_106920735	0.347098	AGUGCAA	ENSMUST00000103067.3|Smurf2|ENSMUSG00000018363.10|SMAD specific E3 ubiquitin protein ligase 2
mm10_v2_chr18_+_10725530_10725564	0.343717	AGUGCAA	ENSMUST00000052838.4|Mib1|ENSMUSG00000024294.7|mindbomb homolog 1 (Drosophila)
mm10_v2_chr1_+_176814660_176814660	0.33866	AGUGCAA	ENSMUST00000056773.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8 	ENSMUST00000027785.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8
mm10_v2_chr11_+_95712673_95712673	0.337126	AGUGCAA	ENSMUST00000107717.1|Zfp652|ENSMUSG00000075595.3|zinc finger protein 652
mm10_v2_chr15_+_39006272_39006365	0.334745	AGUGCAA	ENSMUST00000179165.1|Fzd6|ENSMUSG00000022297.8|frizzled homolog 6 (Drosophila) 	ENSMUST00000022906.7|Fzd6|ENSMUSG00000022297.8|frizzled homolog 6 (Drosophila)
mm10_v2_chr10_-_49788743_49788769	0.328674	AGUGCAA	ENSMUST00000105483.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000105487.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm10_v2_chr4_+_116720920_116721004	0.326139	AGUGCAA	ENSMUST00000045542.6|Tesk2|ENSMUSG00000033985.11|testis-specific kinase 2 	ENSMUST00000106459.1|Tesk2|ENSMUSG00000033985.11|testis-specific kinase 2
mm10_v2_chr2_-_160367057_160367073	0.321579	AGUGCAA	ENSMUST00000099126.3|Mafb|ENSMUSG00000074622.3|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
mm10_v2_chr3_+_152346465_152346531	0.319446	AGUGCAA	ENSMUST00000026507.6|Usp33|ENSMUSG00000025437.9|ubiquitin specific peptidase 33 	ENSMUST00000117492.2|Usp33|ENSMUSG00000025437.9|ubiquitin specific peptidase 33
mm10_v2_chr2_+_14074091_14074146	0.319355	AGUGCAA	ENSMUST00000102960.4|Stam|ENSMUSG00000026718.11|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
mm10_v2_chr8_+_105170668_105170686	0.31775	AGUGCAA	ENSMUST00000109395.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000109394.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000052209.2|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000109392.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta
mm10_v2_chr2_+_138256530_138256615	0.313537	AGUGCAA	ENSMUST00000091556.5|Btbd3|ENSMUSG00000062098.5|BTB (POZ) domain containing 3
mm10_v2_chr2_-_20968881_20968957	0.309625	AGUGCAA	ENSMUST00000114594.1|Arhgap21|ENSMUSG00000036591.9|Rho GTPase activating protein 21
mm10_v2_chr2_-_173276526_173276544	0.308796	AGUGCAA	ENSMUST00000036248.6|Pmepa1|ENSMUSG00000038400.9|prostate transmembrane protein, androgen induced 1
mm10_v2_chr11_-_103267405_103267472	0.307913	AGUGCAA	ENSMUST00000021324.2|Map3k14|ENSMUSG00000020941.7|mitogen-activated protein kinase kinase kinase 14
mm10_v2_chr1_+_132298606_132298631	0.306473	AGUGCAA	ENSMUST00000046071.4|Klhdc8a|ENSMUSG00000042115.4|kelch domain containing 8A
mm10_v2_chr3_+_22076644_22076681	0.306303	AGUGCAA	ENSMUST00000063988.8|Tbl1xr1|ENSMUSG00000027630.8|transducin (beta)-like 1X-linked receptor 1
mm10_v2_chr18_-_88894322_88894371	0.303287	AGUGCAA	ENSMUST00000070116.5|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6 	ENSMUST00000125362.1|Socs6|ENSMUSG00000056153.8|suppressor of cytokine signaling 6
mm10_v2_chr8_-_60983215_60983319	0.291203	AGUGCAA	ENSMUST00000004430.7|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000110301.1|Clcn3|ENSMUSG00000004319.9|chloride channel 3 	ENSMUST00000093490.2|Clcn3|ENSMUSG00000004319.9|chloride channel 3
mm10_v2_chr2_+_93642307_93642388	0.288476	AGUGCAA	ENSMUST00000042078.3|Alx4|ENSMUSG00000040310.6|aristaless-like homeobox 4 	ENSMUST00000111254.1|Alx4|ENSMUSG00000040310.6|aristaless-like homeobox 4
mm10_v2_chr12_+_71831064_71831178	0.288256	AGUGCAA	ENSMUST00000085299.2|Daam1|ENSMUSG00000034574.9|dishevelled associated activator of morphogenesis 1
mm10_v2_chr5_-_138155694_138155744	0.28588	AGUGCAA	ENSMUST00000132318.1|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113 	ENSMUST00000049393.8|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113
mm10_v2_chr14_-_45388772_45388836	0.281597	AGUGCAA	ENSMUST00000046191.7|Gnpnat1|ENSMUSG00000037722.7|glucosamine-phosphate N-acetyltransferase 1
mm10_v2_chr5_-_93045022_93045064	0.280575	AGUGCAA	ENSMUST00000061328.5|Sowahb|ENSMUSG00000045314.5|sosondowah ankyrin repeat domain family member B
mm10_v2_chr13_+_80883403_80883422	0.277623	AGUGCAA	ENSMUST00000099356.2|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr11_+_53770014_53770057	0.273864	AGUGCAA	ENSMUST00000108920.2|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1 	ENSMUST00000140866.1|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1 	ENSMUST00000108922.1|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1
mm10_v2_chr3_+_107101551_107101567	0.273079	AGUGCAA	ENSMUST00000038695.1|Kcna2|ENSMUSG00000040724.1|potassium voltage-gated channel, shaker-related subfamily, member 2
mm10_v2_chr5_-_124425907_124425946	0.271898	AGUGCAA	ENSMUST00000065263.5|Sbno1|ENSMUSG00000038095.9|sno, strawberry notch homolog 1 (Drosophila)
mm10_v2_chr18_-_21300129_21300168	0.259998	AGUGCAA	ENSMUST00000049260.6|Garem|ENSMUSG00000042680.7|GRB2 associated, regulator of MAPK1
mm10_v2_chr3_-_104961695_104961728	0.248347	AGUGCAA	ENSMUST00000029429.4|Wnt2b|ENSMUSG00000027840.4|wingless related MMTV integration site 2b
mm10_v2_chr14_-_49066653_49066674	0.2473	AGUGCAA	ENSMUST00000162175.1|Exoc5|ENSMUSG00000061244.7|exocyst complex component 5
mm10_v2_chr11_-_85139939_85140038	0.246818	AGUGCAA	ENSMUST00000108075.2|Usp32|ENSMUSG00000000804.8|ubiquitin specific peptidase 32
mm10_v2_chr3_-_84304762_84304809	0.245886	AGUGCAA	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr10_-_67285180_67285316	0.236592	AGUGCAA	ENSMUST00000159002.1|Nrbf2|ENSMUSG00000075000.5|nuclear receptor binding factor 2 	ENSMUST00000077839.6|Nrbf2|ENSMUSG00000075000.5|nuclear receptor binding factor 2
mm10_v2_chr9_+_72532214_72532271	0.235029	AGUGCAA	ENSMUST00000163401.2|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7 	ENSMUST00000093820.3|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7
mm10_v2_chr5_-_32854185_32854256	0.234756	AGUGCAA	ENSMUST00000130134.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like 	ENSMUST00000120129.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like
mm10_v2_chr10_+_24149291_24149376	0.233369	AGUGCAA	ENSMUST00000020174.5|Stx7|ENSMUSG00000019998.5|syntaxin 7
mm10_v2_chr10_+_36507013_36507026	0.231958	AGUGCAA	ENSMUST00000168572.1|Hs3st5|ENSMUSG00000044499.5|heparan sulfate (glucosamine) 3-O-sulfotransferase 5
mm10_v2_chrX_-_108834303_108834381	0.229249	AGUGCAA	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chrX_+_10717390_10717450	0.225776	AGUGCAA	ENSMUST00000115524.1|Mid1ip1|ENSMUSG00000008035.6|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish)) 	ENSMUST00000008179.6|Mid1ip1|ENSMUSG00000008035.6|Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
mm10_v2_chr2_+_107290590_107290660	0.224868	AGUGCAA	ENSMUST00000037012.2|Kcna4|ENSMUSG00000042604.5|potassium voltage-gated channel, shaker-related subfamily, member 4
mm10_v2_chrX_+_73342614_73342629	0.220748	AGUGCAA	ENSMUST00000114499.1|Zfp275|ENSMUSG00000031365.7|zinc finger protein 275 	ENSMUST00000033731.3|Zfp275|ENSMUSG00000031365.7|zinc finger protein 275
mm10_v2_chrX_+_99975570_99975781	0.217423	AGUGCAA	ENSMUST00000113779.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113776.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113775.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113780.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113778.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113781.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113783.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000071453.2|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113777.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A
mm10_v2_chr3_-_51560816_51560878	0.215617	AGUGCAA	ENSMUST00000037141.7|Setd7|ENSMUSG00000037111.8|SET domain containing (lysine methyltransferase) 7
mm10_v2_chr18_-_9450097_9450161	0.214372	AGUGCAA	ENSMUST00000053917.4|Ccny|ENSMUSG00000024286.7|cyclin Y
mm10_v2_chr1_+_92910758_92910783	0.210744	AGUGCAA	ENSMUST00000027487.8|Rnpepl1|ENSMUSG00000026269.8|arginyl aminopeptidase (aminopeptidase B)-like 1
mm10_v2_chr10_-_128696257_128696273	0.210644	AGUGCAA	ENSMUST00000000727.2|Rab5b|ENSMUSG00000000711.2|RAB5B, member RAS oncogene family
mm10_v2_chr18_-_53744509_53744629	0.209209	AGUGCAA	ENSMUST00000049811.6|Cep120|ENSMUSG00000048799.7|centrosomal protein 120
mm10_v2_chr4_-_72200833_72200928	0.208431	AGUGCAA	ENSMUST00000102848.2|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl) 	ENSMUST00000072695.6|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl) 	ENSMUST00000107337.1|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl) 	ENSMUST00000074216.7|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl)
mm10_v2_chr11_-_107131922_107131954	0.205685	AGUGCAA	ENSMUST00000057892.8|Bptf|ENSMUSG00000040481.10|bromodomain PHD finger transcription factor
mm10_v2_chr11_-_86757483_86757572	0.204087	AGUGCAA	ENSMUST00000060766.9|Cltc|ENSMUSG00000047126.11|clathrin, heavy polypeptide (Hc) 	ENSMUST00000103186.4|Cltc|ENSMUSG00000047126.11|clathrin, heavy polypeptide (Hc)
mm10_v2_chr12_-_104751900_104751952	0.20385	AGUGCAA	ENSMUST00000041987.6|Dicer1|ENSMUSG00000041415.9|dicer 1, ribonuclease type III
mm10_v2_chr17_-_17624458_17624496	0.203481	AGUGCAA	ENSMUST00000041047.2|Lnpep|ENSMUSG00000023845.6|leucyl/cystinyl aminopeptidase
mm10_v2_chr3_+_60501252_60501275	0.202625	AGUGCAA	ENSMUST00000099087.2|Mbnl1|ENSMUSG00000027763.8|muscleblind-like 1 (Drosophila)
mm10_v2_chr1_-_111864869_111864929	0.201776	AGUGCAA	ENSMUST00000035462.5|Dsel|ENSMUSG00000038702.5|dermatan sulfate epimerase-like
mm10_v2_chr9_-_115310421_115310447	0.199917	AGUGCAA	ENSMUST00000035010.8|Stt3b|ENSMUSG00000032437.9|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm10_v2_chr16_-_50432340_50432409	0.199221	AGUGCAA	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr13_-_119790805_119790805	0.198853	AGUGCAA	ENSMUST00000178271.1|Zfp131|ENSMUSG00000094870.1|zinc finger protein 131 	ENSMUST00000177916.1|Zfp131|ENSMUSG00000094870.1|zinc finger protein 131
mm10_v2_chr12_+_3426857_3426931	0.198398	AGUGCAA	ENSMUST00000111215.3|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000092003.5|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000144247.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000153102.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila)
mm10_v2_chr2_-_35200923_35201120	0.198038	AGUGCAA	ENSMUST00000028238.8|Rab14|ENSMUSG00000026878.10|RAB14, member RAS oncogene family 	ENSMUST00000113025.1|Rab14|ENSMUSG00000026878.10|RAB14, member RAS oncogene family
mm10_v2_chr2_-_58357752_58357895	0.19798	AGUGCAA	ENSMUST00000112608.2|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC 	ENSMUST00000112607.2|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC 	ENSMUST00000028178.7|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC
mm10_v2_chr4_+_109280266_109280315	0.197628	AGUGCAA	ENSMUST00000102729.3|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr8_-_25754214_25754280	0.196987	AGUGCAA	ENSMUST00000033975.6|Ddhd2|ENSMUSG00000061313.7|DDHD domain containing 2
mm10_v2_chr5_+_121397936_121398004	0.196189	AGUGCAA	ENSMUST00000042163.8|Naa25|ENSMUSG00000042719.11|N(alpha)-acetyltransferase 25, NatB auxiliary subunit
mm10_v2_chr2_+_117121374_117121374	0.195999	AGUGCAA	ENSMUST00000028829.6|Spred1|ENSMUSG00000027351.8|sprouty protein with EVH-1 domain 1, related sequence
mm10_v2_chr12_+_81026800_81026828	0.192437	AGUGCAA	ENSMUST00000110347.2|Smoc1|ENSMUSG00000021136.7|SPARC related  modular calcium binding 1 	ENSMUST00000021564.4|Smoc1|ENSMUSG00000021136.7|SPARC related  modular calcium binding 1 	ENSMUST00000129362.1|Smoc1|ENSMUSG00000021136.7|SPARC related  modular calcium binding 1
mm10_v2_chr14_+_30825580_30825640	0.191327	AGUGCAA	ENSMUST00000006701.5|Tmem110|ENSMUSG00000006526.5|transmembrane protein 110
mm10_v2_chr1_+_115684727_115684756	0.189796	AGUGCAA	ENSMUST00000043725.7|Cntnap5a|ENSMUSG00000070695.3|contactin associated protein-like 5A
mm10_v2_chr3_+_94837533_94837567	0.185774	AGUGCAA	ENSMUST00000107270.2|Pogz|ENSMUSG00000038902.8|pogo transposable element with ZNF domain
mm10_v2_chr17_+_87107621_87107684	0.185544	AGUGCAA	ENSMUST00000041369.6|Socs5|ENSMUSG00000037104.8|suppressor of cytokine signaling 5
mm10_v2_chr4_-_109476666_109476727	0.184573	AGUGCAA	ENSMUST00000030284.3|Rnf11|ENSMUSG00000028557.4|ring finger protein 11
mm10_v2_chr5_-_125389915_125390055	0.180494	AGUGCAA	ENSMUST00000136312.1|Ubc|ENSMUSG00000008348.9|ubiquitin C
mm10_v2_chr8_+_105225145_105225193	0.17806	AGUGCAA	ENSMUST00000034361.3|D230025D16Rik|ENSMUSG00000031889.3|RIKEN cDNA D230025D16 gene
mm10_v2_chrX_+_161717498_161717627	0.177479	AGUGCAA	ENSMUST00000061514.7|Rai2|ENSMUSG00000043518.7|retinoic acid induced 2
mm10_v2_chr2_-_119477613_119477705	0.172344	AGUGCAA	ENSMUST00000110808.1|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae) 	ENSMUST00000049920.7|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae)
mm10_v2_chr3_-_32365643_32365691	0.165851	AGUGCAA	ENSMUST00000029199.5|Zmat3|ENSMUSG00000027663.6|zinc finger matrin type 3
mm10_v2_chr2_-_104494400_104494463	0.165606	AGUGCAA	ENSMUST00000028600.7|Hipk3|ENSMUSG00000027177.8|homeodomain interacting protein kinase 3
mm10_v2_chr14_-_63543931_63543991	0.164827	AGUGCAA	ENSMUST00000058679.5|Mtmr9|ENSMUSG00000035078.5|myotubularin related protein 9
mm10_v2_chr14_-_122465677_122465677	0.161691	AGUGCAA	ENSMUST00000039118.6|Zic5|ENSMUSG00000041703.7|zinc finger protein of the cerebellum 5
mm10_v2_chr1_-_24587433_24587472	0.160494	AGUGCAA	ENSMUST00000115244.2|Col19a1|ENSMUSG00000026141.7|collagen, type XIX, alpha 1
mm10_v2_chr8_-_67974567_67974596	0.155329	AGUGCAA	ENSMUST00000098696.3|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000038959.9|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000093469.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr10_-_123076367_123076505	0.151808	AGUGCAA	ENSMUST00000073792.3|Mon2|ENSMUSG00000034602.7|MON2 homolog (yeast) 	ENSMUST00000170935.1|Mon2|ENSMUSG00000034602.7|MON2 homolog (yeast) 	ENSMUST00000037557.7|Mon2|ENSMUSG00000034602.7|MON2 homolog (yeast)
mm10_v2_chr14_-_74947865_74947883	0.150664	AGUGCAA	ENSMUST00000088970.5|Lrch1|ENSMUSG00000068015.6|leucine-rich repeats and calponin homology (CH) domain containing 1
mm10_v2_chr9_-_42472198_42472265	0.150001	AGUGCAA	ENSMUST00000128959.1|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like 	ENSMUST00000066148.5|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like 	ENSMUST00000138506.1|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like
mm10_v2_chr3_+_34020075_34020082	0.149893	AGUGCAA	ENSMUST00000001620.8|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog 	ENSMUST00000167354.1|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog
mm10_v2_chr5_+_114568016_114568016	0.14786	AGUGCAA	ENSMUST00000043650.7|Fam222a|ENSMUSG00000041930.7|family with sequence similarity 222, member A
mm10_v2_chr7_-_105752193_105752234	0.147811	AGUGCAA	ENSMUST00000033184.4|Tpp1|ENSMUSG00000030894.4|tripeptidyl peptidase I
mm10_v2_chr14_+_8098196_8098296	0.146499	AGUGCAA	ENSMUST00000112689.2|Pxk|ENSMUSG00000033885.8|PX domain containing serine/threonine kinase 	ENSMUST00000036682.7|Pxk|ENSMUSG00000033885.8|PX domain containing serine/threonine kinase
mm10_v2_chr9_-_99140065_99140087	0.146071	AGUGCAA	ENSMUST00000035037.7|Pik3cb|ENSMUSG00000032462.8|phosphatidylinositol 3-kinase, catalytic, beta polypeptide
mm10_v2_chr14_+_45219993_45219993	0.145626	AGUGCAA	ENSMUST00000146150.1|Gpr137c|ENSMUSG00000049092.10|G protein-coupled receptor 137C
mm10_v2_chr17_+_42315947_42315947	0.14444	AGUGCAA	ENSMUST00000048691.4|Ptchd4|ENSMUSG00000042256.4|patched domain containing 4
mm10_v2_chr10_-_67912620_67912685	0.144101	AGUGCAA	ENSMUST00000064656.7|Zfp365|ENSMUSG00000037855.9|zinc finger protein 365
mm10_v2_chr2_+_112379204_112379253	0.142968	AGUGCAA	ENSMUST00000028552.3|Katnbl1|ENSMUSG00000027132.3|katanin p80 subunit B like 1
mm10_v2_chr10_-_95416850_95416861	0.142026	AGUGCAA	ENSMUST00000020215.9|Socs2|ENSMUSG00000020027.12|suppressor of cytokine signaling 2
mm10_v2_chr4_+_101419277_101419332	0.141288	AGUGCAA	ENSMUST00000102780.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106946.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106945.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4
mm10_v2_chr3_-_88425094_88425139	0.139976	AGUGCAA	ENSMUST00000168755.1|Slc25a44|ENSMUSG00000050144.7|solute carrier family 25, member 44 	ENSMUST00000057935.6|Slc25a44|ENSMUSG00000050144.7|solute carrier family 25, member 44
mm10_v2_chr13_-_93192270_93192328	0.133099	AGUGCAA	ENSMUST00000048702.5|Papd4|ENSMUSG00000042167.5|PAP associated domain containing 4
mm10_v2_chr8_+_111536492_111536640	0.129977	AGUGCAA	ENSMUST00000168428.1|Znrf1|ENSMUSG00000033545.8|zinc and ring finger 1 	ENSMUST00000171182.1|Znrf1|ENSMUSG00000033545.8|zinc and ring finger 1
mm10_v2_chr2_-_38287347_38287394	0.126201	AGUGCAA	ENSMUST00000102787.3|Dennd1a|ENSMUSG00000035392.11|DENN/MADD domain containing 1A
mm10_v2_chr12_-_69681795_69681869	0.125799	AGUGCAA	ENSMUST00000183277.1|Sos2|ENSMUSG00000034801.7|son of sevenless homolog 2 (Drosophila) 	ENSMUST00000035773.7|Sos2|ENSMUSG00000034801.7|son of sevenless homolog 2 (Drosophila)
mm10_v2_chr18_+_76241580_76241741	0.119648	AGUGCAA	ENSMUST00000168423.1|Smad2|ENSMUSG00000024563.9|SMAD family member 2 	ENSMUST00000091831.6|Smad2|ENSMUSG00000024563.9|SMAD family member 2
mm10_v2_chr6_+_71543797_71543868	0.116869	AGUGCAA	ENSMUST00000059462.5|Chmp3|ENSMUSG00000053119.5|charged multivesicular body protein 3
mm10_v2_chr14_-_31417666_31417678	0.115798	AGUGCAA	ENSMUST00000100730.3|Sh3bp5|ENSMUSG00000021892.8|SH3-domain binding protein 5 (BTK-associated)
mm10_v2_chr5_+_30155243_30155311	0.113907	AGUGCAA	ENSMUST00000026841.8|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit 	ENSMUST00000123980.1|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit 	ENSMUST00000114786.1|Hadhb|ENSMUSG00000059447.7|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit
mm10_v2_chr14_-_46788267_46788411	0.110688	AGUGCAA	ENSMUST00000015903.4|Cnih1|ENSMUSG00000015759.4|cornichon homolog 1 (Drosophila)
mm10_v2_chr4_+_137594140_137594274	0.107119	AGUGCAA	ENSMUST00000105840.1|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48 	ENSMUST00000055131.6|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48 	ENSMUST00000105839.1|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48 	ENSMUST00000105838.1|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48
mm10_v2_chr3_+_135438722_135438780	0.106111	AGUGCAA	ENSMUST00000166033.1|Ube2d3|ENSMUSG00000078578.3|ubiquitin-conjugating enzyme E2D 3
mm10_v2_chr19_+_21272276_21272296	0.102589	AGUGCAA	ENSMUST00000025659.4|Zfand5|ENSMUSG00000024750.4|zinc finger, AN1-type domain 5
mm10_v2_chr1_-_54194048_54194048	0.0999909	AGUGCAA	ENSMUST00000120904.1|Hecw2|ENSMUSG00000042807.9|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm10_v2_chr10_-_25200110_25200178	0.098475	AGUGCAA	ENSMUST00000100012.2|Akap7|ENSMUSG00000039166.9|A kinase (PRKA) anchor protein 7
mm10_v2_chr11_+_105589970_105590028	0.0979385	AGUGCAA	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chr11_+_69765899_69765925	0.0970854	AGUGCAA	ENSMUST00000108640.1|Zbtb4|ENSMUSG00000018750.8|zinc finger and BTB domain containing 4 	ENSMUST00000108639.1|Zbtb4|ENSMUSG00000018750.8|zinc finger and BTB domain containing 4
mm10_v2_chr9_+_118606687_118606751	0.0964085	AGUGCAA	ENSMUST00000044165.7|Itga9|ENSMUSG00000039115.7|integrin alpha 9
mm10_v2_chr12_+_84114321_84114391	0.0949661	AGUGCAA	ENSMUST00000123491.1|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1 	ENSMUST00000046340.2|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1 	ENSMUST00000136159.1|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1
mm10_v2_chr11_+_74649462_74649520	0.0944063	AGUGCAA	ENSMUST00000092915.5|Cluh|ENSMUSG00000020741.11|clustered mitochondria (cluA/CLU1) homolog 	ENSMUST00000117818.1|Cluh|ENSMUSG00000020741.11|clustered mitochondria (cluA/CLU1) homolog
mm10_v2_chr9_+_53537021_53537074	0.0943506	AGUGCAA	ENSMUST00000035850.7|Npat|ENSMUSG00000033054.7|nuclear protein in the AT region
mm10_v2_chr1_-_80340480_80340512	0.0925756	AGUGCAA	ENSMUST00000163119.1|Cul3|ENSMUSG00000004364.8|cullin 3
mm10_v2_chr13_+_14063776_14063822	0.0912962	AGUGCAA	ENSMUST00000129488.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110536.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110534.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000039538.8|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110533.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like)
mm10_v2_chr5_-_30155101_30155162	0.0908802	AGUGCAA	ENSMUST00000156859.1|Hadha|ENSMUSG00000025745.5|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit
mm10_v2_chr16_-_9994921_9995012	0.0873564	AGUGCAA	ENSMUST00000115835.1|Grin2a|ENSMUSG00000059003.6|glutamate receptor, ionotropic, NMDA2A (epsilon 1)
mm10_v2_chr10_-_128645965_128645991	0.0870839	AGUGCAA	ENSMUST00000133342.1|Ikzf4|ENSMUSG00000002578.9|IKAROS family zinc finger 4
mm10_v2_chr1_-_161131428_161131511	0.086676	AGUGCAA	ENSMUST00000111611.1|Klhl20|ENSMUSG00000026705.10|kelch-like 20
mm10_v2_chr14_-_47568427_47568436	0.0862585	AGUGCAA	ENSMUST00000042988.6|Atg14|ENSMUSG00000037526.6|autophagy related 14
mm10_v2_chr12_+_29938036_29938059	0.0844935	AGUGCAA	ENSMUST00000122328.1|Pxdn|ENSMUSG00000020674.10|peroxidasin homolog (Drosophila) 	ENSMUST00000118321.1|Pxdn|ENSMUSG00000020674.10|peroxidasin homolog (Drosophila)
mm10_v2_chr13_-_98891036_98891063	0.0842241	AGUGCAA	ENSMUST00000109399.2|Tnpo1|ENSMUSG00000009470.10|transportin 1
mm10_v2_chr3_-_94582716_94582741	0.0835418	AGUGCAA	ENSMUST00000029783.9|Snx27|ENSMUSG00000028136.9|sorting nexin family member 27
mm10_v2_chr6_-_100287441_100287465	0.0801144	AGUGCAA	ENSMUST00000101118.2|Rybp|ENSMUSG00000072872.2|RING1 and YY1 binding protein
mm10_v2_chr10_-_71285234_71285262	0.0736439	AGUGCAA	ENSMUST00000020085.6|Ube2d1|ENSMUSG00000019927.6|ubiquitin-conjugating enzyme E2D 1
mm10_v2_chr11_+_96365752_96365752	0.0731602	AGUGCAA	ENSMUST00000019117.2|Hoxb1|ENSMUSG00000018973.2|homeobox B1
mm10_v2_chrX_+_52988119_52988148	0.0713682	AGUGCAA	ENSMUST00000026723.8|Hprt|ENSMUSG00000025630.8|hypoxanthine guanine phosphoribosyl transferase
mm10_v2_chr6_-_97205549_97205642	0.0673646	AGUGCAA	ENSMUST00000164744.1|Uba3|ENSMUSG00000030061.10|ubiquitin-like modifier activating enzyme 3 	ENSMUST00000089287.5|Uba3|ENSMUSG00000030061.10|ubiquitin-like modifier activating enzyme 3
mm10_v2_chr18_-_35215008_35215033	0.0658007	AGUGCAA	ENSMUST00000091636.3|Lrrtm2|ENSMUSG00000071862.2|leucine rich repeat transmembrane neuronal 2
mm10_v2_chr1_+_6487231_6487338	0.059228	AGUGCAA	ENSMUST00000140079.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18 	ENSMUST00000131494.1|St18|ENSMUSG00000033740.11|suppression of tumorigenicity 18
mm10_v2_chr11_-_28584260_28584324	0.0587837	AGUGCAA	ENSMUST00000093253.3|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A 	ENSMUST00000109502.2|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A 	ENSMUST00000042534.8|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A
mm10_v2_chr6_+_53573364_53573394	0.05597	AGUGCAA	ENSMUST00000047450.7|Creb5|ENSMUSG00000053007.6|cAMP responsive element binding protein 5
mm10_v2_chr18_-_73703739_73703806	0.0550894	AGUGCAA	ENSMUST00000025393.7|Smad4|ENSMUSG00000024515.7|SMAD family member 4
mm10_v2_chr1_-_182341585_182341625	0.053218	AGUGCAA	ENSMUST00000051431.4|Fbxo28|ENSMUSG00000047539.4|F-box protein 28
mm10_v2_chr5_+_118169712_118169748	0.0526423	AGUGCAA	ENSMUST00000054836.6|Hrk|ENSMUSG00000046607.6|harakiri, BCL2 interacting protein (contains only BH3 domain)
mm10_v2_chr12_-_119238794_119238863	0.0472131	AGUGCAA	ENSMUST00000026360.8|Itgb8|ENSMUSG00000025321.8|integrin beta 8
mm10_v2_chr4_-_25800083_25800146	0.0472125	AGUGCAA	ENSMUST00000084770.4|Fut9|ENSMUSG00000055373.8|fucosyltransferase 9
mm10_v2_chr14_-_16575456_16575501	0.0465744	AGUGCAA	ENSMUST00000063750.6|Rarb|ENSMUSG00000017491.8|retinoic acid receptor, beta
mm10_v2_chr15_+_5143861_5143896	0.046364	AGUGCAA	ENSMUST00000051186.8|Prkaa1|ENSMUSG00000050697.8|protein kinase, AMP-activated, alpha 1 catalytic subunit
mm10_v2_chr4_-_82505749_82505802	0.0456697	AGUGCAA	ENSMUST00000107245.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107246.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr4_-_126429501_126429556	0.0422725	AGUGCAA	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr12_-_75596195_75596261	0.0393826	AGUGCAA	ENSMUST00000021447.7|Ppp2r5e|ENSMUSG00000021051.9|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform
mm10_v2_chr7_-_47008397_47008421	0.0381109	AGUGCAA	ENSMUST00000061639.7|Spty2d1|ENSMUSG00000049516.7|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
mm10_v2_chr8_-_115707778_115707794	0.0375937	AGUGCAA	ENSMUST00000109104.1|Maf|ENSMUSG00000055435.6|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm10_v2_chr3_-_116424007_116424032	0.0361796	AGUGCAA	ENSMUST00000090464.4|Cdc14a|ENSMUSG00000033502.8|CDC14 cell division cycle 14A
mm10_v2_chr1_-_156718989_156719021	0.0353556	AGUGCAA	ENSMUST00000122424.1|Fam20b|ENSMUSG00000033557.11|family with sequence similarity 20, member B
mm10_v2_chr2_-_69586021_69586065	0.0332156	AGUGCAA	ENSMUST00000100051.2|Lrp2|ENSMUSG00000027070.8|low density lipoprotein receptor-related protein 2 	ENSMUST00000092551.4|Lrp2|ENSMUSG00000027070.8|low density lipoprotein receptor-related protein 2 	ENSMUST00000080953.5|Lrp2|ENSMUSG00000027070.8|low density lipoprotein receptor-related protein 2
mm10_v2_chr3_-_119783262_119783388	0.0315535	AGUGCAA	ENSMUST00000029780.7|Ptbp2|ENSMUSG00000028134.7|polypyrimidine tract binding protein 2
mm10_v2_chr10_+_96616998_96617015	0.0282314	AGUGCAA	ENSMUST00000038377.7|Btg1|ENSMUSG00000036478.7|B cell translocation gene 1, anti-proliferative
mm10_v2_chr10_-_116581478_116581511	0.0278487	AGUGCAA	ENSMUST00000105267.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000105265.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000167706.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000168036.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000169921.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000020374.5|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2
mm10_v2_chr9_+_15306212_15306219	0.0272775	AGUGCAA	ENSMUST00000034415.5|Taf1d|ENSMUSG00000031939.9|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D 	ENSMUST00000164079.1|Taf1d|ENSMUSG00000031939.9|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D
mm10_v2_chr7_+_123123870_123123901	0.025737	AGUGCAA	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr10_+_81136223_81136271	0.0252409	AGUGCAA	ENSMUST00000048128.8|Zbtb7a|ENSMUSG00000035011.9|zinc finger and BTB domain containing 7a
mm10_v2_chrX_-_43167817_43167838	0.0242312	AGUGCAA	ENSMUST00000115058.1|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1 	ENSMUST00000115059.1|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1
mm10_v2_chr8_-_86885222_86885282	0.0222333	AGUGCAA	ENSMUST00000034074.7|N4bp1|ENSMUSG00000031652.10|NEDD4 binding protein 1
mm10_v2_chr10_+_56377300_56377338	0.0220147	AGUGCAA	ENSMUST00000068581.7|Gja1|ENSMUSG00000050953.9|gap junction protein, alpha 1
mm10_v2_chr1_-_64121456_64121491	0.0165157	AGUGCAA	ENSMUST00000142009.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous) 	ENSMUST00000114086.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr8_-_40511663_40511756	0.0153166	AGUGCAA	ENSMUST00000135269.1|Cnot7|ENSMUSG00000031601.10|CCR4-NOT transcription complex, subunit 7 	ENSMUST00000034012.3|Cnot7|ENSMUSG00000031601.10|CCR4-NOT transcription complex, subunit 7
mm10_v2_chr6_+_49319274_49319367	0.00743759	AGUGCAA	ENSMUST00000055559.7|Ccdc126|ENSMUSG00000050786.8|coiled-coil domain containing 126 	ENSMUST00000114491.1|Ccdc126|ENSMUSG00000050786.8|coiled-coil domain containing 126
mm10_v2_chr2_+_181763315_181763335	0.00469576	AGUGCAA	ENSMUST00000081125.4|Myt1|ENSMUSG00000010505.9|myelin transcription factor 1
mm10_v2_chr4_-_87230435_87230477	0.00132517	AGUGCAA	ENSMUST00000107157.2|Slc24a2|ENSMUSG00000037996.11|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
