mm10_v2_chr9_+_65101453_65101535	8.44068	AGGUAGU	ENSMUST00000077696.6|Igdcc4|ENSMUSG00000032816.8|immunoglobulin superfamily, DCC subclass, member 4 	ENSMUST00000035499.4|Igdcc4|ENSMUSG00000032816.8|immunoglobulin superfamily, DCC subclass, member 4 	ENSMUST00000166273.1|Igdcc4|ENSMUSG00000032816.8|immunoglobulin superfamily, DCC subclass, member 4
mm10_v2_chr11_-_96005872_96005952	8.26112	AGGUAGU	ENSMUST00000013559.2|Igf2bp1|ENSMUSG00000013415.3|insulin-like growth factor 2 mRNA binding protein 1
mm10_v2_chr10_-_45470201_45470260	5.68219	AGGUAGU	ENSMUST00000079390.6|Lin28b|ENSMUSG00000063804.7|lin-28 homolog B (C. elegans)
mm10_v2_chrX_+_93654863_93654981	5.13789	AGGUAGU	ENSMUST00000113933.2|Pcyt1b|ENSMUSG00000035246.10|phosphate cytidylyltransferase 1, choline, beta isoform
mm10_v2_chr4_-_134018829_134018841	4.16495	AGGUAGU	ENSMUST00000051674.2|Lin28a|ENSMUSG00000050966.3|lin-28 homolog A (C. elegans)
mm10_v2_chr6_-_49214954_49215022	4.08881	AGGUAGU	ENSMUST00000031838.7|Igf2bp3|ENSMUSG00000029814.8|insulin-like growth factor 2 mRNA binding protein 3
mm10_v2_chr2_-_152415044_152415044	3.9581	AGGUAGU	ENSMUST00000099207.3|Zcchc3|ENSMUSG00000074682.3|zinc finger, CCHC domain containing 3
mm10_v2_chr1_+_86303221_86303239	3.50236	AGGUAGU	ENSMUST00000113306.2|B3gnt7|ENSMUSG00000079445.2|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
mm10_v2_chr6_-_52226165_52226196	3.23775	AGGUAGU	ENSMUST00000114425.2|Hoxa9|ENSMUSG00000038227.9|homeobox A9
mm10_v2_chr11_+_44617310_44617336	2.98589	AGGUAGU	ENSMUST00000081265.5|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000101326.3|Ebf1|ENSMUSG00000057098.8|early B cell factor 1 	ENSMUST00000109268.1|Ebf1|ENSMUSG00000057098.8|early B cell factor 1
mm10_v2_chr13_+_35659856_35659870	2.97462	AGGUAGU	ENSMUST00000075220.6|Cdyl|ENSMUSG00000059288.7|chromodomain protein, Y chromosome-like
mm10_v2_chr7_+_120842824_120842836	2.72495	AGGUAGU	ENSMUST00000047875.8|Eef2k|ENSMUSG00000035064.10|eukaryotic elongation factor-2 kinase
mm10_v2_chr4_+_140700487_140700541	2.71922	AGGUAGU	ENSMUST00000071169.2|Rcc2|ENSMUSG00000040945.7|regulator of chromosome condensation 2
mm10_v2_chr13_-_117025505_117025541	2.60933	AGGUAGU	ENSMUST00000022239.6|Parp8|ENSMUSG00000021725.8|poly (ADP-ribose) polymerase family, member 8
mm10_v2_chr10_+_117629493_117629506	2.50182	AGGUAGU	ENSMUST00000020399.5|Cpm|ENSMUSG00000020183.5|carboxypeptidase M
mm10_v2_chr10_-_120476469_120476527	2.49027	AGGUAGU	ENSMUST00000072777.7|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2 	ENSMUST00000159699.1|Hmga2|ENSMUSG00000056758.8|high mobility group AT-hook 2
mm10_v2_chr9_-_123632545_123632565	2.34197	AGGUAGU	ENSMUST00000026273.8|Slc6a20b|ENSMUSG00000025243.8|solute carrier family 6 (neurotransmitter transporter), member 20B
mm10_v2_chr2_+_31245801_31245900	2.31982	AGGUAGU	ENSMUST00000000199.7|Ncs1|ENSMUSG00000062661.6|neuronal calcium sensor 1
mm10_v2_chr17_+_27556613_27556635	2.08217	AGGUAGU	ENSMUST00000117600.1|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1 	ENSMUST00000114888.3|Hmga1|ENSMUSG00000046711.9|high mobility group AT-hook 1
mm10_v2_chr1_-_37541003_37541046	2.05218	AGGUAGU	ENSMUST00000151952.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm10_v2_chr6_-_145048809_145048821	1.98184	AGGUAGU	ENSMUST00000032402.5|Bcat1|ENSMUSG00000030268.11|branched chain aminotransferase 1, cytosolic
mm10_v2_chr6_+_4747306_4747372	1.9642	AGGUAGU	ENSMUST00000175823.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10 	ENSMUST00000176204.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10 	ENSMUST00000166678.1|Peg10|ENSMUSG00000092035.2|paternally expressed 10
mm10_v2_chr17_-_26095487_26095514	1.96332	AGGUAGU	ENSMUST00000025007.5|Nme4|ENSMUSG00000024177.8|NME/NM23 nucleoside diphosphate kinase 4
mm10_v2_chr3_+_145292472_145292536	1.93681	AGGUAGU	ENSMUST00000029848.4|Col24a1|ENSMUSG00000028197.4|collagen, type XXIV, alpha 1 	ENSMUST00000139001.1|Col24a1|ENSMUSG00000028197.4|collagen, type XXIV, alpha 1
mm10_v2_chrX_-_133688978_133689005	1.92536	AGGUAGU	ENSMUST00000149154.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19 	ENSMUST00000167944.1|Pcdh19|ENSMUSG00000051323.10|protocadherin 19
mm10_v2_chr10_-_123196916_123196961	1.78446	AGGUAGU	ENSMUST00000020334.7|Usp15|ENSMUSG00000020124.9|ubiquitin specific peptidase 15
mm10_v2_chr1_-_191026181_191026197	1.72453	AGGUAGU	ENSMUST00000085635.4|Mfsd7b|ENSMUSG00000066595.4|major facilitator superfamily domain containing 7B
mm10_v2_chr9_+_72806874_72806874	1.67442	AGGUAGU	ENSMUST00000055535.8|Prtg|ENSMUSG00000036030.9|protogenin homolog (Gallus gallus)
mm10_v2_chrX_-_48454152_48454193	1.64262	AGGUAGU	ENSMUST00000114958.1|Elf4|ENSMUSG00000031103.6|E74-like factor 4 (ets domain transcription factor)
mm10_v2_chr7_+_16130285_16130333	1.49702	AGGUAGU	ENSMUST00000168693.1|Slc8a2|ENSMUSG00000030376.7|solute carrier family 8 (sodium/calcium exchanger), member 2
mm10_v2_chr2_+_112379204_112379253	1.41697	AGGUAGU	ENSMUST00000028552.3|Katnbl1|ENSMUSG00000027132.3|katanin p80 subunit B like 1
mm10_v2_chr11_+_94936224_94936260	1.3184	AGGUAGU	ENSMUST00000001547.7|Col1a1|ENSMUSG00000001506.10|collagen, type I, alpha 1
mm10_v2_chr1_-_135105210_135105276	1.24552	AGGUAGU	ENSMUST00000044828.7|Lgr6|ENSMUSG00000042793.7|leucine-rich repeat-containing G protein-coupled receptor 6
mm10_v2_chr10_+_58446845_58446928	1.17617	AGGUAGU	ENSMUST00000003310.5|Ranbp2|ENSMUSG00000003226.6|RAN binding protein 2
mm10_v2_chr16_+_33062512_33062549	1.16082	AGGUAGU	ENSMUST00000023497.2|Lmln|ENSMUSG00000022802.2|leishmanolysin-like (metallopeptidase M8 family)
mm10_v2_chr15_+_11064764_11064797	1.07449	AGGUAGU	ENSMUST00000061318.7|Adamts12|ENSMUSG00000047497.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
mm10_v2_chr6_-_52217505_52217550	1.06769	AGGUAGU	ENSMUST00000048715.6|Hoxa7|ENSMUSG00000038236.6|homeobox A7
mm10_v2_chr19_-_7383026_7383063	1.03734	AGGUAGU	ENSMUST00000025924.2|AI846148|ENSMUSG00000024970.4|expressed sequence AI846148
mm10_v2_chr17_-_68004075_68004140	1.02897	AGGUAGU	ENSMUST00000024840.5|Arhgap28|ENSMUSG00000024043.7|Rho GTPase activating protein 28
mm10_v2_chr8_-_90348343_90348386	1.0217	AGGUAGU	ENSMUST00000109621.3|Tox3|ENSMUSG00000043668.7|TOX high mobility group box family member 3
mm10_v2_chr13_+_45507438_45507515	1.01914	AGGUAGU	ENSMUST00000000260.6|Gmpr|ENSMUSG00000000253.6|guanosine monophosphate reductase
mm10_v2_chr6_+_4505493_4505493	1.01375	AGGUAGU	ENSMUST00000031668.8|Col1a2|ENSMUSG00000029661.10|collagen, type I, alpha 2
mm10_v2_chr8_-_122699066_122699119	0.953846	AGGUAGU	ENSMUST00000127984.1|Cbfa2t3|ENSMUSG00000006362.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)
mm10_v2_chr7_-_16924114_16924137	0.915605	AGGUAGU	ENSMUST00000019514.9|Calm3|ENSMUSG00000019370.10|calmodulin 3
mm10_v2_chr4_+_28813125_28813136	0.893	AGGUAGU	ENSMUST00000029964.5|Epha7|ENSMUSG00000028289.6|Eph receptor A7 	ENSMUST00000080934.4|Epha7|ENSMUSG00000028289.6|Eph receptor A7
mm10_v2_chr2_-_93334467_93334515	0.891074	AGGUAGU	ENSMUST00000111265.2|Tspan18|ENSMUSG00000027217.7|tetraspanin 18
mm10_v2_chr3_+_68468162_68468209	0.888382	AGGUAGU	ENSMUST00000182532.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr6_+_134920401_134920434	0.856297	AGGUAGU	ENSMUST00000067327.4|Cdkn1b|ENSMUSG00000003031.8|cyclin-dependent kinase inhibitor 1B 	ENSMUST00000003115.6|Cdkn1b|ENSMUSG00000003031.8|cyclin-dependent kinase inhibitor 1B
mm10_v2_chr1_+_130717320_130717333	0.847911	AGGUAGU	ENSMUST00000049813.4|Yod1|ENSMUSG00000046404.4|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)
mm10_v2_chr8_-_105827190_105827350	0.827076	AGGUAGU	ENSMUST00000041400.5|Ranbp10|ENSMUSG00000037415.5|RAN binding protein 10
mm10_v2_chr2_-_152398046_152398076	0.797083	AGGUAGU	ENSMUST00000063332.8|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12 	ENSMUST00000182625.1|Sox12|ENSMUSG00000051817.8|SRY-box containing gene 12
mm10_v2_chr5_-_124095749_124095820	0.788006	AGGUAGU	ENSMUST00000031354.4|Abcb9|ENSMUSG00000029408.7|ATP-binding cassette, sub-family B (MDR/TAP), member 9
mm10_v2_chr14_-_49066653_49066674	0.736806	AGGUAGU	ENSMUST00000162175.1|Exoc5|ENSMUSG00000061244.7|exocyst complex component 5
mm10_v2_chr5_-_107289561_107289637	0.69331	AGGUAGU	ENSMUST00000031224.8|Tgfbr3|ENSMUSG00000029287.8|transforming growth factor, beta receptor III
mm10_v2_chr16_+_37916440_37916496	0.682748	AGGUAGU	ENSMUST00000061274.7|Gpr156|ENSMUSG00000046961.7|G protein-coupled receptor 156
mm10_v2_chr15_+_102990576_102990622	0.678275	AGGUAGU	ENSMUST00000001703.6|Hoxc8|ENSMUSG00000001657.6|homeobox C8
mm10_v2_chr11_-_115603866_115604051	0.643699	AGGUAGU	ENSMUST00000125097.1|Gga3|ENSMUSG00000020740.7|golgi associated, gamma adaptin ear containing, ARF binding protein 3 	ENSMUST00000106508.3|Gga3|ENSMUSG00000020740.7|golgi associated, gamma adaptin ear containing, ARF binding protein 3 	ENSMUST00000019135.7|Gga3|ENSMUSG00000020740.7|golgi associated, gamma adaptin ear containing, ARF binding protein 3
mm10_v2_chr9_+_27790947_27790991	0.633499	AGGUAGU	ENSMUST00000115243.2|Opcml|ENSMUSG00000062257.6|opioid binding protein/cell adhesion molecule-like
mm10_v2_chr8_-_47352348_47352367	0.598683	AGGUAGU	ENSMUST00000110367.2|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chrX_+_138914422_138914438	0.596057	AGGUAGU	ENSMUST00000064937.7|Nrk|ENSMUSG00000052854.9|Nik related kinase 	ENSMUST00000113052.1|Nrk|ENSMUSG00000052854.9|Nik related kinase
mm10_v2_chr5_+_13399309_13399382	0.592452	AGGUAGU	ENSMUST00000030714.7|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 	ENSMUST00000141968.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr13_-_111808938_111809018	0.588069	AGGUAGU	ENSMUST00000109267.2|Map3k1|ENSMUSG00000021754.11|mitogen-activated protein kinase kinase kinase 1
mm10_v2_chr14_-_105176860_105176918	0.583744	AGGUAGU	ENSMUST00000163545.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr16_+_87698904_87698959	0.574555	AGGUAGU	ENSMUST00000026703.5|Bach1|ENSMUSG00000025612.5|BTB and CNC homology 1
mm10_v2_chr11_-_57832679_57832818	0.56549	AGGUAGU	ENSMUST00000160392.2|Hand1|ENSMUSG00000037335.7|heart and neural crest derivatives expressed transcript 1 	ENSMUST00000108845.2|Hand1|ENSMUSG00000037335.7|heart and neural crest derivatives expressed transcript 1
mm10_v2_chr15_+_6708372_6708396	0.564669	AGGUAGU	ENSMUST00000061656.6|Rictor|ENSMUSG00000050310.8|RPTOR independent companion of MTOR, complex 2
mm10_v2_chr5_-_135545108_135545128	0.548375	AGGUAGU	ENSMUST00000060311.8|Hip1|ENSMUSG00000039959.9|huntingtin interacting protein 1
mm10_v2_chr11_-_88718223_88718294	0.535108	AGGUAGU	ENSMUST00000107909.1|Msi2|ENSMUSG00000069769.7|musashi RNA-binding protein 2
mm10_v2_chr6_-_52204415_52204587	0.529549	AGGUAGU	ENSMUST00000048794.6|Hoxa5|ENSMUSG00000038253.6|homeobox A5
mm10_v2_chr12_-_27342696_27342726	0.500462	AGGUAGU	ENSMUST00000079063.5|Sox11|ENSMUSG00000063632.5|SRY-box containing gene 11
mm10_v2_chr11_+_54303798_54303844	0.484511	AGGUAGU	ENSMUST00000093106.5|Acsl6|ENSMUSG00000020333.11|acyl-CoA synthetase long-chain family member 6
mm10_v2_chr17_+_31057686_31057699	0.482766	AGGUAGU	ENSMUST00000024829.6|Abcg1|ENSMUSG00000024030.6|ATP-binding cassette, sub-family G (WHITE), member 1
mm10_v2_chr18_+_12128850_12128868	0.476753	AGGUAGU	ENSMUST00000025270.6|Riok3|ENSMUSG00000024404.6|RIO kinase 3
mm10_v2_chr7_+_44442398_44442485	0.470943	AGGUAGU	ENSMUST00000058667.8|Lrrc4b|ENSMUSG00000047085.8|leucine rich repeat containing 4B
mm10_v2_chr12_-_34528844_34528904	0.462151	AGGUAGU	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chrX_+_153237748_153237748	0.441052	AGGUAGU	ENSMUST00000112574.2|Klf8|ENSMUSG00000041649.7|Kruppel-like factor 8
mm10_v2_chr9_-_50617428_50617467	0.435661	AGGUAGU	ENSMUST00000131351.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823 	ENSMUST00000171462.1|AU019823|ENSMUSG00000059820.8|expressed sequence AU019823
mm10_v2_chr10_-_76345254_76345371	0.434428	AGGUAGU	ENSMUST00000036033.7|Dip2a|ENSMUSG00000020231.9|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENSMUST00000160048.1|Dip2a|ENSMUSG00000020231.9|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENSMUST00000105417.3|Dip2a|ENSMUSG00000020231.9|DIP2 disco-interacting protein 2 homolog A (Drosophila)
mm10_v2_chr1_-_155972887_155972890	0.40857	AGGUAGU	ENSMUST00000138762.1|Cep350|ENSMUSG00000033671.11|centrosomal protein 350 	ENSMUST00000124495.1|Cep350|ENSMUSG00000033671.11|centrosomal protein 350
mm10_v2_chr4_+_21931291_21931366	0.37271	AGGUAGU	ENSMUST00000029908.7|Faxc|ENSMUSG00000028246.7|failed axon connections homolog (Drosophila)
mm10_v2_chr2_-_34372004_34372044	0.360848	AGGUAGU	ENSMUST00000113132.2|Pbx3|ENSMUSG00000038718.9|pre B cell leukemia homeobox 3 	ENSMUST00000040638.8|Pbx3|ENSMUSG00000038718.9|pre B cell leukemia homeobox 3
mm10_v2_chr6_-_127151044_127151055	0.355707	AGGUAGU	ENSMUST00000000188.8|Ccnd2|ENSMUSG00000000184.9|cyclin D2
mm10_v2_chr9_-_117252450_117252489	0.330866	AGGUAGU	ENSMUST00000111773.3|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein 	ENSMUST00000068962.7|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein 	ENSMUST00000044901.7|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein
mm10_v2_chr4_+_6365650_6365720	0.317032	AGGUAGU	ENSMUST00000029912.4|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000103008.5|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000175769.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000108374.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein 	ENSMUST00000140830.1|Sdcbp|ENSMUSG00000028249.9|syndecan binding protein
mm10_v2_chr18_+_31609512_31609512	0.311144	AGGUAGU	ENSMUST00000164667.1|B930094E09Rik|ENSMUSG00000092124.1|RIKEN cDNA B930094E09 gene
mm10_v2_chr2_+_60209887_60210073	0.297697	AGGUAGU	ENSMUST00000102748.4|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7 	ENSMUST00000102747.1|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7
mm10_v2_chr12_-_104751900_104751952	0.274739	AGGUAGU	ENSMUST00000041987.6|Dicer1|ENSMUSG00000041415.9|dicer 1, ribonuclease type III
mm10_v2_chr18_-_10181792_10181792	0.260545	AGGUAGU	ENSMUST00000067947.5|Rock1|ENSMUSG00000024290.8|Rho-associated coiled-coil containing protein kinase 1
mm10_v2_chr14_-_70443442_70443476	0.229611	AGGUAGU	ENSMUST00000000793.5|Polr3d|ENSMUSG00000000776.6|polymerase (RNA) III (DNA directed) polypeptide D
mm10_v2_chr8_-_110997764_110997839	0.221719	AGGUAGU	ENSMUST00000040416.7|Ddx19a|ENSMUSG00000015023.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a
mm10_v2_chrX_-_7188713_7188743	0.20259	AGGUAGU	ENSMUST00000004428.7|Clcn5|ENSMUSG00000004317.8|chloride channel 5
mm10_v2_chr2_-_153529941_153529985	0.201556	AGGUAGU	ENSMUST00000035346.7|8430427H17Rik|ENSMUSG00000061411.6|RIKEN cDNA 8430427H17 gene
mm10_v2_chrX_-_104201126_104201185	0.200659	AGGUAGU	ENSMUST00000056502.6|C77370|ENSMUSG00000046449.9|expressed sequence C77370 	ENSMUST00000118314.1|C77370|ENSMUSG00000046449.9|expressed sequence C77370
mm10_v2_chr10_-_23349887_23349919	0.199112	AGGUAGU	ENSMUST00000074366.6|Eya4|ENSMUSG00000010461.8|eyes absent 4 homolog (Drosophila) 	ENSMUST00000092665.4|Eya4|ENSMUSG00000010461.8|eyes absent 4 homolog (Drosophila)
mm10_v2_chr8_-_84104773_84104793	0.193458	AGGUAGU	ENSMUST00000041367.7|Dcaf15|ENSMUSG00000037103.7|DDB1 and CUL4 associated factor 15
mm10_v2_chr19_+_40831248_40831292	0.192447	AGGUAGU	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr1_+_93803945_93803998	0.185977	AGGUAGU	ENSMUST00000027505.6|Ing5|ENSMUSG00000026283.7|inhibitor of growth family, member 5
mm10_v2_chr10_+_127677064_127677099	0.182258	AGGUAGU	ENSMUST00000118612.1|Tmem194|ENSMUSG00000040195.5|transmembrane protein 194 	ENSMUST00000048099.4|Tmem194|ENSMUSG00000040195.5|transmembrane protein 194
mm10_v2_chr19_+_23758819_23758907	0.179786	AGGUAGU	ENSMUST00000025830.7|Apba1|ENSMUSG00000024897.8|amyloid beta (A4) precursor protein binding, family  A, member 1
mm10_v2_chr8_+_14095849_14095915	0.176748	AGGUAGU	ENSMUST00000152652.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2 	ENSMUST00000133298.1|Dlgap2|ENSMUSG00000047495.9|discs, large (Drosophila) homolog-associated protein 2
mm10_v2_chr8_-_91313223_91313279	0.162037	AGGUAGU	ENSMUST00000047783.7|Rpgrip1l|ENSMUSG00000033282.7|Rpgrip1-like
mm10_v2_chrX_-_21061981_21062062	0.155709	AGGUAGU	ENSMUST00000040628.5|Zfp182|ENSMUSG00000054737.5|zinc finger protein 182 	ENSMUST00000115333.2|Zfp182|ENSMUSG00000054737.5|zinc finger protein 182 	ENSMUST00000115334.1|Zfp182|ENSMUSG00000054737.5|zinc finger protein 182
mm10_v2_chr7_+_90426312_90426312	0.153592	AGGUAGU	ENSMUST00000061391.7|Ccdc89|ENSMUSG00000044362.7|coiled-coil domain containing 89
mm10_v2_chr8_-_111027752_111027791	0.152192	AGGUAGU	ENSMUST00000040241.8|Ddx19b|ENSMUSG00000033658.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
mm10_v2_chr6_+_92091378_92091390	0.136741	AGGUAGU	ENSMUST00000113460.1|Nr2c2|ENSMUSG00000005893.8|nuclear receptor subfamily 2, group C, member 2
mm10_v2_chr2_+_122738495_122738600	0.134362	AGGUAGU	ENSMUST00000005954.8|Bloc1s6|ENSMUSG00000005804.8|biogenesis of organelles complex-1, subunit 6, pallidin
mm10_v2_chr9_+_110132015_110132102	0.118629	AGGUAGU	ENSMUST00000088716.5|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111969.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000035057.7|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111966.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 	ENSMUST00000111968.1|Smarcc1|ENSMUSG00000032481.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
mm10_v2_chr15_-_43170809_43170834	0.117368	AGGUAGU	ENSMUST00000063492.6|Rspo2|ENSMUSG00000051920.6|R-spondin 2 homolog (Xenopus laevis)
mm10_v2_chr6_+_7844806_7844859	0.117304	AGGUAGU	ENSMUST00000040159.4|C1galt1|ENSMUSG00000042460.4|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
mm10_v2_chr13_+_96924674_96924694	0.0976856	AGGUAGU	ENSMUST00000171324.1|Gcnt4|ENSMUSG00000091387.1|glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase)
mm10_v2_chr3_+_103058302_103058352	0.0965155	AGGUAGU	ENSMUST00000029445.6|Nras|ENSMUSG00000027852.8|neuroblastoma ras oncogene
mm10_v2_chr12_-_91590009_91590056	0.0948387	AGGUAGU	ENSMUST00000021345.6|Gtf2a1|ENSMUSG00000020962.7|general transcription factor II A, 1
mm10_v2_chr17_+_33929514_33929586	0.0786969	AGGUAGU	ENSMUST00000047503.9|Rgl2|ENSMUSG00000041354.9|ral guanine nucleotide dissociation stimulator-like 2
mm10_v2_chr4_-_82859571_82859679	0.0640412	AGGUAGU	ENSMUST00000156055.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21 	ENSMUST00000030110.8|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr4_+_86874396_86874438	0.0619263	AGGUAGU	ENSMUST00000045224.7|Acer2|ENSMUSG00000038007.8|alkaline ceramidase 2 	ENSMUST00000084433.4|Acer2|ENSMUSG00000038007.8|alkaline ceramidase 2
mm10_v2_chr11_+_105589970_105590028	0.0595984	AGGUAGU	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chr12_-_11436607_11436649	0.0470814	AGGUAGU	ENSMUST00000072299.5|Vsnl1|ENSMUSG00000054459.6|visinin-like 1
mm10_v2_chr1_-_134955908_134955955	0.0411524	AGGUAGU	ENSMUST00000045665.6|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000086444.4|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000112163.1|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm10_v2_chr9_+_111311674_111311758	0.0376233	AGGUAGU	ENSMUST00000078626.3|Trank1|ENSMUSG00000062296.4|tetratricopeptide repeat and ankyrin repeat containing 1
mm10_v2_chr6_-_115994953_115995010	0.0369169	AGGUAGU	ENSMUST00000015511.8|Plxnd1|ENSMUSG00000030123.9|plexin D1
mm10_v2_chr2_+_156196642_156196775	0.0209364	AGGUAGU	ENSMUST00000037401.8|Phf20|ENSMUSG00000038116.10|PHD finger protein 20
mm10_v2_chr11_+_96292453_96292508	0.0208358	AGGUAGU	ENSMUST00000173432.1|Hoxb6|ENSMUSG00000000690.4|homeobox B6
mm10_v2_chr6_-_120493807_120493913	0.0137594	AGGUAGU	ENSMUST00000178687.1|Cecr6|ENSMUSG00000094626.1|cat eye syndrome chromosome region, candidate 6
mm10_v2_chrX_-_111697069_111697127	0.00531324	AGGUAGU	ENSMUST00000113422.2|Hdx|ENSMUSG00000034551.6|highly divergent homeobox 	ENSMUST00000038472.5|Hdx|ENSMUSG00000034551.6|highly divergent homeobox
mm10_v2_chr2_+_154436437_154436535	0.00168434	AGGUAGU	ENSMUST00000109725.1|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000099178.3|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000045270.8|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000109724.1|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm10_v2_chr3_-_10440054_10440127	0.000540756	AGGUAGU	ENSMUST00000099223.4|Snx16|ENSMUSG00000027534.10|sorting nexin 16 	ENSMUST00000029047.6|Snx16|ENSMUSG00000027534.10|sorting nexin 16
