mm10_v2_chr2_+_113327711_113327753	0.450926	AGCUUAU	ENSMUST00000099576.2|Fmn1|ENSMUSG00000044042.12|formin 1
mm10_v2_chr11_+_21091291_21091339	0.369934	AGCUUAU	ENSMUST00000093290.5|Peli1|ENSMUSG00000020134.7|pellino 1
mm10_v2_chrX_+_161162744_161162775	0.349911	AGCUUAU	ENSMUST00000074802.5|Scml2|ENSMUSG00000000037.10|sex comb on midleg-like 2 (Drosophila) 	ENSMUST00000019101.4|Scml2|ENSMUSG00000000037.10|sex comb on midleg-like 2 (Drosophila) 	ENSMUST00000112345.1|Scml2|ENSMUSG00000000037.10|sex comb on midleg-like 2 (Drosophila)
mm10_v2_chrX_+_42149288_42149412	0.344894	AGCUUAU	ENSMUST00000115073.2|Stag2|ENSMUSG00000025862.8|stromal antigen 2 	ENSMUST00000115072.1|Stag2|ENSMUSG00000025862.8|stromal antigen 2
mm10_v2_chr2_+_113441064_113441079	0.335142	AGCUUAU	ENSMUST00000081349.6|Fmn1|ENSMUSG00000044042.12|formin 1
mm10_v2_chr4_-_19708922_19709004	0.327044	AGCUUAU	ENSMUST00000108246.2|Wwp1|ENSMUSG00000041058.9|WW domain containing E3 ubiquitin protein ligase 1
mm10_v2_chr13_-_101768154_101768217	0.320897	AGCUUAU	ENSMUST00000055518.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr2_-_126876209_126876267	0.314346	AGCUUAU	ENSMUST00000103224.3|Trpm7|ENSMUSG00000027365.8|transient receptor potential cation channel, subfamily M, member 7
mm10_v2_chr5_+_3803160_3803193	0.314156	AGCUUAU	ENSMUST00000171023.1|Krit1|ENSMUSG00000000600.9|KRIT1, ankyrin repeat containing 	ENSMUST00000080085.4|Krit1|ENSMUSG00000000600.9|KRIT1, ankyrin repeat containing
mm10_v2_chr14_+_79426454_79426511	0.300477	AGCUUAU	ENSMUST00000061222.7|Kbtbd7|ENSMUSG00000043881.8|kelch repeat and BTB (POZ) domain containing 7
mm10_v2_chr3_+_103279293_103279293	0.278	AGCUUAU	ENSMUST00000029444.6|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33 	ENSMUST00000106860.1|Trim33|ENSMUSG00000033014.6|tripartite motif-containing 33
mm10_v2_chr9_-_70657121_70657188	0.26402	AGCUUAU	ENSMUST00000049031.5|Fam63b|ENSMUSG00000042444.9|family with sequence similarity 63, member B
mm10_v2_chr2_-_117342709_117342822	0.263914	AGCUUAU	ENSMUST00000173541.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1 	ENSMUST00000172901.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1 	ENSMUST00000173252.1|Rasgrp1|ENSMUSG00000027347.12|RAS guanyl releasing protein 1
mm10_v2_chr13_-_107890059_107890073	0.260572	AGCUUAU	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr13_+_34875488_34875515	0.253314	AGCUUAU	ENSMUST00000077853.3|Prpf4b|ENSMUSG00000021413.8|PRP4 pre-mRNA processing factor 4 homolog B (yeast)
mm10_v2_chr6_-_71440623_71440645	0.252522	AGCUUAU	ENSMUST00000002292.8|Rmnd5a|ENSMUSG00000002222.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm10_v2_chr1_+_130717320_130717333	0.251481	AGCUUAU	ENSMUST00000049813.4|Yod1|ENSMUSG00000046404.4|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)
mm10_v2_chr13_-_64153194_64153207	0.245812	AGCUUAU	ENSMUST00000059817.4|Zfp367|ENSMUSG00000044934.6|zinc finger protein 367 	ENSMUST00000117241.1|Zfp367|ENSMUSG00000044934.6|zinc finger protein 367
mm10_v2_chr6_-_39206782_39206831	0.245193	AGCUUAU	ENSMUST00000002305.8|Jhdm1d|ENSMUSG00000042599.8|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm10_v2_chr19_-_29805989_29806009	0.210561	AGCUUAU	ENSMUST00000177155.1|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene 	ENSMUST00000059484.7|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene
mm10_v2_chr3_-_9833653_9833679	0.208568	AGCUUAU	ENSMUST00000161949.1|Pag1|ENSMUSG00000027508.9|phosphoprotein associated with glycosphingolipid microdomains 1
mm10_v2_chr3_-_127837419_127837505	0.204484	AGCUUAU	ENSMUST00000051737.6|Ap1ar|ENSMUSG00000074238.2|adaptor-related protein complex 1 associated regulatory protein
mm10_v2_chr1_+_185454803_185454848	0.199499	AGCUUAU	ENSMUST00000061093.6|Slc30a10|ENSMUSG00000026614.6|solute carrier family 30, member 10
mm10_v2_chr2_-_12301914_12301922	0.197792	AGCUUAU	ENSMUST00000028106.4|Itga8|ENSMUSG00000026768.4|integrin alpha 8
mm10_v2_chr9_-_85327110_85327128	0.192681	AGCUUAU	ENSMUST00000034802.8|Fam46a|ENSMUSG00000032265.8|family with sequence similarity 46, member A
mm10_v2_chr13_-_85288999_85289058	0.189481	AGCUUAU	ENSMUST00000109552.2|Rasa1|ENSMUSG00000021549.7|RAS p21 protein activator 1
mm10_v2_chr17_-_88065291_88065291	0.189291	AGCUUAU	ENSMUST00000005504.8|Fbxo11|ENSMUSG00000005371.8|F-box protein 11
mm10_v2_chr12_+_52516077_52516077	0.180994	AGCUUAU	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr11_+_79993062_79993122	0.18081	AGCUUAU	ENSMUST00000017692.8|Suz12|ENSMUSG00000017548.9|suppressor of zeste 12 homolog (Drosophila) 	ENSMUST00000163272.1|Suz12|ENSMUSG00000017548.9|suppressor of zeste 12 homolog (Drosophila)
mm10_v2_chr11_-_6475992_6476102	0.172813	AGCUUAU	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr8_-_34965631_34965714	0.167104	AGCUUAU	ENSMUST00000033929.4|Tnks|ENSMUSG00000031529.4|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
mm10_v2_chr1_+_140246216_140246226	0.162243	AGCUUAU	ENSMUST00000119786.1|Kcnt2|ENSMUSG00000052726.9|potassium channel, subfamily T, member 2 	ENSMUST00000120796.1|Kcnt2|ENSMUSG00000052726.9|potassium channel, subfamily T, member 2 	ENSMUST00000060201.8|Kcnt2|ENSMUSG00000052726.9|potassium channel, subfamily T, member 2 	ENSMUST00000120709.1|Kcnt2|ENSMUSG00000052726.9|potassium channel, subfamily T, member 2
mm10_v2_chr3_+_103914560_103914605	0.154215	AGCUUAU	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr18_+_35562158_35562174	0.14629	AGCUUAU	ENSMUST00000166793.1|Matr3|ENSMUSG00000037236.8|matrin 3
mm10_v2_chr9_-_117252450_117252489	0.139847	AGCUUAU	ENSMUST00000111773.3|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein 	ENSMUST00000068962.7|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein 	ENSMUST00000044901.7|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein
mm10_v2_chr2_-_102901346_102901665	0.139323	AGCUUAU	ENSMUST00000111192.2|Cd44|ENSMUSG00000005087.11|CD44 antigen 	ENSMUST00000111190.2|Cd44|ENSMUSG00000005087.11|CD44 antigen 	ENSMUST00000111198.2|Cd44|ENSMUSG00000005087.11|CD44 antigen 	ENSMUST00000111191.2|Cd44|ENSMUSG00000005087.11|CD44 antigen 	ENSMUST00000060516.7|Cd44|ENSMUSG00000005087.11|CD44 antigen 	ENSMUST00000099673.2|Cd44|ENSMUSG00000005087.11|CD44 antigen 	ENSMUST00000005218.8|Cd44|ENSMUSG00000005087.11|CD44 antigen 	ENSMUST00000111194.1|Cd44|ENSMUSG00000005087.11|CD44 antigen
mm10_v2_chr14_+_17660956_17660963	0.136687	AGCUUAU	ENSMUST00000022303.7|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta 	ENSMUST00000091471.4|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta
mm10_v2_chr10_+_86300372_86300372	0.133292	AGCUUAU	ENSMUST00000020234.7|Timp3|ENSMUSG00000020044.7|tissue inhibitor of metalloproteinase 3
mm10_v2_chr3_+_90341654_90341654	0.132651	AGCUUAU	ENSMUST00000049382.4|Gatad2b|ENSMUSG00000042390.5|GATA zinc finger domain containing 2B
mm10_v2_chr9_-_43105718_43105793	0.132458	AGCUUAU	ENSMUST00000165665.1|Arhgef12|ENSMUSG00000059495.7|Rho guanine nucleotide exchange factor (GEF) 12
mm10_v2_chr12_+_83632208_83632325	0.132112	AGCUUAU	ENSMUST00000048155.9|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182618.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000183154.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182036.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182347.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25
mm10_v2_chr1_-_106714217_106714330	0.13155	AGCUUAU	ENSMUST00000112751.1|Bcl2|ENSMUSG00000057329.6|B cell leukemia/lymphoma 2
mm10_v2_chr5_+_13399309_13399382	0.130972	AGCUUAU	ENSMUST00000030714.7|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 	ENSMUST00000141968.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr2_+_109917639_109917656	0.130741	AGCUUAU	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr14_+_49066495_49066587	0.130337	AGCUUAU	ENSMUST00000037473.4|Ap5m1|ENSMUSG00000036291.5|adaptor-related protein complex 5, mu 1 subunit
mm10_v2_chr7_+_130865756_130865812	0.123466	AGCUUAU	ENSMUST00000120441.1|Plekha1|ENSMUSG00000040268.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
mm10_v2_chr5_+_123343834_123343970	0.120551	AGCUUAU	ENSMUST00000120593.1|Bcl7a|ENSMUSG00000029438.3|B cell CLL/lymphoma 7A
mm10_v2_chr6_-_129507107_129507171	0.117323	AGCUUAU	ENSMUST00000183258.1|Olr1|ENSMUSG00000030162.8|oxidized low density lipoprotein (lectin-like) receptor 1 	ENSMUST00000182784.1|Olr1|ENSMUSG00000030162.8|oxidized low density lipoprotein (lectin-like) receptor 1 	ENSMUST00000032265.6|Olr1|ENSMUSG00000030162.8|oxidized low density lipoprotein (lectin-like) receptor 1 	ENSMUST00000162815.1|Olr1|ENSMUSG00000030162.8|oxidized low density lipoprotein (lectin-like) receptor 1
mm10_v2_chr13_+_5861489_5861501	0.114155	AGCUUAU	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr13_+_81711407_81711457	0.110236	AGCUUAU	ENSMUST00000057598.5|Mblac2|ENSMUSG00000051098.5|metallo-beta-lactamase domain containing 2
mm10_v2_chr11_-_30025915_30026033	0.105343	AGCUUAU	ENSMUST00000058902.5|Eml6|ENSMUSG00000044072.8|echinoderm microtubule associated protein like 6
mm10_v2_chr11_+_60417238_60417301	0.103378	AGCUUAU	ENSMUST00000070681.6|Gid4|ENSMUSG00000018415.8|GID complex subunit 4, VID24 homolog (S. cerevisiae)
mm10_v2_chr2_+_48814109_48814173	0.102427	AGCUUAU	ENSMUST00000063886.3|Acvr2a|ENSMUSG00000052155.5|activin receptor IIA
mm10_v2_chr10_-_120979327_120979373	0.0998524	AGCUUAU	ENSMUST00000119944.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3 	ENSMUST00000119093.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3
mm10_v2_chr15_-_12592556_12592556	0.0989368	AGCUUAU	ENSMUST00000075317.5|Pdzd2|ENSMUSG00000022197.9|PDZ domain containing 2
mm10_v2_chr9_-_123632545_123632565	0.0967381	AGCUUAU	ENSMUST00000026273.8|Slc6a20b|ENSMUSG00000025243.8|solute carrier family 6 (neurotransmitter transporter), member 20B
mm10_v2_chr8_+_107293463_107293483	0.0957464	AGCUUAU	ENSMUST00000169453.1|Nfat5|ENSMUSG00000003847.10|nuclear factor of activated T cells 5
mm10_v2_chr3_+_60501252_60501275	0.0930187	AGCUUAU	ENSMUST00000099087.2|Mbnl1|ENSMUSG00000027763.8|muscleblind-like 1 (Drosophila)
mm10_v2_chr5_+_16553488_16553550	0.0894186	AGCUUAU	ENSMUST00000030683.3|Hgf|ENSMUSG00000028864.3|hepatocyte growth factor
mm10_v2_chr6_+_147091379_147091528	0.0889981	AGCUUAU	ENSMUST00000036003.7|Klhl42|ENSMUSG00000040102.9|kelch-like 42
mm10_v2_chr2_-_137116624_137116644	0.0879504	AGCUUAU	ENSMUST00000028735.7|Jag1|ENSMUSG00000027276.7|jagged 1
mm10_v2_chr9_+_52047150_52047163	0.0857814	AGCUUAU	ENSMUST00000163153.1|Rdx|ENSMUSG00000032050.10|radixin
mm10_v2_chr2_+_79635352_79635410	0.0842494	AGCUUAU	ENSMUST00000111785.2|Ssfa2|ENSMUSG00000027007.10|sperm specific antigen 2
mm10_v2_chr1_+_65186727_65186750	0.0835881	AGCUUAU	ENSMUST00000097707.4|Pikfyve|ENSMUSG00000025949.9|phosphoinositide kinase, FYVE finger containing 	ENSMUST00000081154.7|Pikfyve|ENSMUSG00000025949.9|phosphoinositide kinase, FYVE finger containing
mm10_v2_chr17_+_24488773_24488799	0.0831201	AGCUUAU	ENSMUST00000024958.7|Caskin1|ENSMUSG00000033597.8|CASK interacting protein 1
mm10_v2_chr11_-_49712674_49712726	0.0830055	AGCUUAU	ENSMUST00000020624.6|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6 	ENSMUST00000145353.1|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6
mm10_v2_chr18_+_36281069_36281151	0.0805217	AGCUUAU	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chrX_+_159255782_159255899	0.0798121	AGCUUAU	ENSMUST00000126686.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3 	ENSMUST00000033671.6|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chr17_+_26715644_26715724	0.0797702	AGCUUAU	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr14_+_31019125_31019157	0.0795136	AGCUUAU	ENSMUST00000112095.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000112098.3|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000112106.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1 	ENSMUST00000146325.1|Pbrm1|ENSMUSG00000042323.10|polybromo 1
mm10_v2_chr13_+_83504032_83504050	0.0759679	AGCUUAU	ENSMUST00000163888.1|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C 	ENSMUST00000005722.7|Mef2c|ENSMUSG00000005583.10|myocyte enhancer factor 2C
mm10_v2_chr5_-_63968867_63968905	0.0744181	AGCUUAU	ENSMUST00000154169.1|Rell1|ENSMUSG00000047881.8|RELT-like 1
mm10_v2_chr17_+_25188380_25188418	0.0700151	AGCUUAU	ENSMUST00000039734.5|Unkl|ENSMUSG00000015127.8|unkempt-like (Drosophila)
mm10_v2_chr3_+_136670076_136670186	0.0645337	AGCUUAU	ENSMUST00000070198.7|Ppp3ca|ENSMUSG00000028161.11|protein phosphatase 3, catalytic subunit, alpha isoform
mm10_v2_chr9_-_70503718_70503805	0.0640114	AGCUUAU	ENSMUST00000034739.5|Rnf111|ENSMUSG00000032217.6|ring finger 111
mm10_v2_chrX_+_160390684_160390730	0.0637254	AGCUUAU	ENSMUST00000112408.2|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112402.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112401.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112400.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112405.2|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000112404.2|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64 	ENSMUST00000146805.1|Gpr64|ENSMUSG00000031298.9|G protein-coupled receptor 64
mm10_v2_chr10_+_42761483_42761496	0.0614183	AGCUUAU	ENSMUST00000019937.4|Sec63|ENSMUSG00000019802.7|SEC63-like (S. cerevisiae)
mm10_v2_chr3_-_89913144_89913172	0.0606285	AGCUUAU	ENSMUST00000029559.6|Il6ra|ENSMUSG00000027947.7|interleukin 6 receptor, alpha
mm10_v2_chr1_+_59764264_59764286	0.0592072	AGCUUAU	ENSMUST00000087435.5|Bmpr2|ENSMUSG00000067336.5|bone morphogenetic protein receptor, type II (serine/threonine kinase)
mm10_v2_chr17_+_29032664_29032681	0.0582375	AGCUUAU	ENSMUST00000130216.1|Srsf3|ENSMUSG00000071172.6|serine/arginine-rich splicing factor 3
mm10_v2_chr4_-_14826582_14826589	0.0579963	AGCUUAU	ENSMUST00000117268.1|Otud6b|ENSMUSG00000040550.10|OTU domain containing 6B
mm10_v2_chr3_+_98013503_98013547	0.0576566	AGCUUAU	ENSMUST00000079812.6|Notch2|ENSMUSG00000027878.10|notch 2
mm10_v2_chr5_-_4104654_4104792	0.0572729	AGCUUAU	ENSMUST00000001507.4|Cyp51|ENSMUSG00000001467.4|cytochrome P450, family 51
mm10_v2_chr17_-_64331817_64331957	0.0572699	AGCUUAU	ENSMUST00000172733.1|Pja2|ENSMUSG00000024083.9|praja 2, RING-H2 motif containing 	ENSMUST00000172818.1|Pja2|ENSMUSG00000024083.9|praja 2, RING-H2 motif containing
mm10_v2_chr12_+_53248677_53248677	0.0554178	AGCUUAU	ENSMUST00000101432.2|Npas3|ENSMUSG00000021010.7|neuronal PAS domain protein 3
mm10_v2_chr10_+_7681197_7681225	0.0552683	AGCUUAU	ENSMUST00000165952.1|Lats1|ENSMUSG00000040021.6|large tumor suppressor
mm10_v2_chr8_-_85555261_85555315	0.0550872	AGCUUAU	ENSMUST00000034138.5|Dnaja2|ENSMUSG00000031701.5|DnaJ (Hsp40) homolog, subfamily A, member 2
mm10_v2_chr4_-_70534904_70534987	0.054787	AGCUUAU	ENSMUST00000107359.2|Megf9|ENSMUSG00000039270.3|multiple EGF-like-domains 9
mm10_v2_chr1_-_17097839_17097889	0.054236	AGCUUAU	ENSMUST00000038382.4|Jph1|ENSMUSG00000042686.4|junctophilin 1
mm10_v2_chr1_-_156939626_156939657	0.0518424	AGCUUAU	ENSMUST00000063199.6|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000027886.7|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2 	ENSMUST00000172057.1|Ralgps2|ENSMUSG00000026594.8|Ral GEF with PH domain and SH3 binding motif 2
mm10_v2_chr5_+_102481374_102481391	0.0513722	AGCUUAU	ENSMUST00000094559.2|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24 	ENSMUST00000073302.5|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24
mm10_v2_chr11_-_100650693_100650749	0.0509615	AGCUUAU	ENSMUST00000103119.3|Zfp385c|ENSMUSG00000014198.9|zinc finger protein 385C
mm10_v2_chr9_-_96631487_96631617	0.050502	AGCUUAU	ENSMUST00000128346.1|Rasa2|ENSMUSG00000032413.6|RAS p21 protein activator 2 	ENSMUST00000034984.6|Rasa2|ENSMUSG00000032413.6|RAS p21 protein activator 2
mm10_v2_chr18_+_75367529_75367561	0.0498495	AGCUUAU	ENSMUST00000026999.3|Smad7|ENSMUSG00000025880.5|SMAD family member 7
mm10_v2_chr7_+_120677579_120677630	0.048027	AGCUUAU	ENSMUST00000060175.6|BC030336|ENSMUSG00000046096.6|cDNA sequence BC030336
mm10_v2_chr5_+_147430407_147430545	0.047774	AGCUUAU	ENSMUST00000176600.1|Pan3|ENSMUSG00000029647.9|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm10_v2_chr1_-_178337774_178337797	0.0462589	AGCUUAU	ENSMUST00000037748.7|Hnrnpu|ENSMUSG00000039630.8|heterogeneous nuclear ribonucleoprotein U
mm10_v2_chr3_+_137867675_137867797	0.0429897	AGCUUAU	ENSMUST00000090178.5|Dnajb14|ENSMUSG00000074212.3|DnaJ (Hsp40) homolog, subfamily B, member 14
mm10_v2_chr2_-_58357752_58357895	0.0429125	AGCUUAU	ENSMUST00000112608.2|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC 	ENSMUST00000112607.2|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC 	ENSMUST00000028178.7|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC
mm10_v2_chr6_+_134830145_134830179	0.0427487	AGCUUAU	ENSMUST00000046303.5|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chr11_-_98625661_98625661	0.0390757	AGCUUAU	ENSMUST00000104933.1|Gm12355|ENSMUSG00000078134.1|predicted gene 12355
mm10_v2_chr15_+_80711292_80711340	0.0389387	AGCUUAU	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr3_-_56183678_56183701	0.0370164	AGCUUAU	ENSMUST00000029374.6|Nbea|ENSMUSG00000027799.8|neurobeachin
mm10_v2_chr4_+_89137122_89137122	0.0362881	AGCUUAU	ENSMUST00000058030.7|Mtap|ENSMUSG00000062937.5|methylthioadenosine phosphorylase
mm10_v2_chr2_-_131352857_131352889	0.036137	AGCUUAU	ENSMUST00000059372.4|Rnf24|ENSMUSG00000048911.9|ring finger protein 24
mm10_v2_chr5_-_50058908_50059010	0.0343253	AGCUUAU	ENSMUST00000030971.5|Gpr125|ENSMUSG00000029090.8|G protein-coupled receptor 125
mm10_v2_chrX_+_135839034_135839075	0.0340995	AGCUUAU	ENSMUST00000173804.1|Gprasp2|ENSMUSG00000072966.5|G protein-coupled receptor associated sorting protein 2 	ENSMUST00000113136.1|Gprasp2|ENSMUSG00000072966.5|G protein-coupled receptor associated sorting protein 2
mm10_v2_chr3_+_129199919_129199943	0.0336391	AGCUUAU	ENSMUST00000029657.9|Pitx2|ENSMUSG00000028023.10|paired-like homeodomain transcription factor 2 	ENSMUST00000106382.4|Pitx2|ENSMUSG00000028023.10|paired-like homeodomain transcription factor 2
mm10_v2_chr2_+_69897220_69897247	0.0315951	AGCUUAU	ENSMUST00000055758.9|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3 	ENSMUST00000112251.2|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr9_-_8004585_8004623	0.0298571	AGCUUAU	ENSMUST00000086580.5|Yap1|ENSMUSG00000053110.7|yes-associated protein 1 	ENSMUST00000065353.6|Yap1|ENSMUSG00000053110.7|yes-associated protein 1
mm10_v2_chr6_+_71493850_71493918	0.029164	AGCUUAU	ENSMUST00000064637.4|Rnf103|ENSMUSG00000052656.6|ring finger protein 103 	ENSMUST00000114178.1|Rnf103|ENSMUSG00000052656.6|ring finger protein 103
mm10_v2_chr8_-_111876661_111876725	0.027098	AGCUUAU	ENSMUST00000034431.1|Tmem170|ENSMUSG00000031953.1|transmembrane protein 170
mm10_v2_chr14_-_56778301_56778352	0.0233001	AGCUUAU	ENSMUST00000022507.5|Pspc1|ENSMUSG00000021938.5|paraspeckle protein 1 	ENSMUST00000163924.1|Pspc1|ENSMUSG00000021938.5|paraspeckle protein 1
mm10_v2_chr14_-_21052420_21052450	0.0220938	AGCUUAU	ENSMUST00000154460.1|Ap3m1|ENSMUSG00000021824.6|adaptor-related protein complex 3, mu 1 subunit
mm10_v2_chr14_-_105896819_105896819	0.020248	AGCUUAU	ENSMUST00000022709.4|Spry2|ENSMUSG00000022114.4|sprouty homolog 2 (Drosophila)
mm10_v2_chr1_-_58586191_58586323	0.0171229	AGCUUAU	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr6_-_83831736_83831750	0.0162088	AGCUUAU	ENSMUST00000058383.8|Paip2b|ENSMUSG00000045896.8|poly(A) binding protein interacting protein 2B
mm10_v2_chr13_-_115101909_115101984	0.0148098	AGCUUAU	ENSMUST00000061673.7|Itga1|ENSMUSG00000042284.9|integrin alpha 1
mm10_v2_chr10_+_67979569_67979575	0.0147645	AGCUUAU	ENSMUST00000118160.1|Rtkn2|ENSMUSG00000037846.12|rhotekin 2
mm10_v2_chr17_-_6961156_6961156	0.0147361	AGCUUAU	ENSMUST00000063683.6|Tagap1|ENSMUSG00000052031.7|T cell activation GTPase activating protein 1
mm10_v2_chr4_-_123750236_123750345	0.01205	AGCUUAU	ENSMUST00000102636.3|Akirin1|ENSMUSG00000023075.9|akirin 1
mm10_v2_chr5_+_123142187_123142229	0.0113115	AGCUUAU	ENSMUST00000174836.1|Setd1b|ENSMUSG00000038384.10|SET domain containing 1B 	ENSMUST00000163030.2|Setd1b|ENSMUSG00000038384.10|SET domain containing 1B
mm10_v2_chr16_-_46496955_46496986	0.0107089	AGCUUAU	ENSMUST00000023335.6|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3 	ENSMUST00000023334.8|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3
mm10_v2_chr8_+_106935720_106935776	0.00922421	AGCUUAU	ENSMUST00000047425.3|Sntb2|ENSMUSG00000041308.5|syntrophin, basic 2
mm10_v2_chr2_-_152415044_152415044	0.00618568	AGCUUAU	ENSMUST00000099207.3|Zcchc3|ENSMUSG00000074682.3|zinc finger, CCHC domain containing 3
mm10_v2_chr10_-_19015347_19015410	0.00581732	AGCUUAU	ENSMUST00000019997.4|Tnfaip3|ENSMUSG00000019850.5|tumor necrosis factor, alpha-induced protein 3
mm10_v2_chr2_+_153741274_153741294	0.00574221	AGCUUAU	ENSMUST00000028981.8|Mapre1|ENSMUSG00000027479.8|microtubule-associated protein, RP/EB family, member 1
mm10_v2_chr17_-_51832666_51832678	0.00554737	AGCUUAU	ENSMUST00000144331.1|Satb1|ENSMUSG00000023927.9|special AT-rich sequence binding protein 1
mm10_v2_chr1_+_74506044_74506105	0.00500906	AGCUUAU	ENSMUST00000087215.5|Rqcd1|ENSMUSG00000026174.8|rcd1 (required for cell differentiation) homolog 1 (S. pombe)
mm10_v2_chr15_-_43170809_43170834	0.00450275	AGCUUAU	ENSMUST00000063492.6|Rspo2|ENSMUSG00000051920.6|R-spondin 2 homolog (Xenopus laevis)
mm10_v2_chr6_+_66896397_66896479	0.00407801	AGCUUAU	ENSMUST00000043148.6|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114228.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114227.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114226.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114225.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12 	ENSMUST00000114224.1|Gng12|ENSMUSG00000036402.7|guanine nucleotide binding protein (G protein), gamma 12
mm10_v2_chr16_+_11322876_11322911	0.00316954	AGCUUAU	ENSMUST00000180792.1|Snx29|ENSMUSG00000071669.8|sorting nexin 29
mm10_v2_chr6_-_143947092_143947111	0.00281062	AGCUUAU	ENSMUST00000144289.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000111748.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr3_-_131344892_131344940	0.000914125	AGCUUAU	ENSMUST00000090246.4|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2 	ENSMUST00000126569.1|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2
mm10_v2_chr10_+_53596936_53597004	0.000687563	AGCUUAU	ENSMUST00000020004.6|Asf1a|ENSMUSG00000019857.6|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
mm10_v2_chr15_+_34306666_34306757	0.000526833	AGCUUAU	ENSMUST00000163455.2|Matn2|ENSMUSG00000022324.8|matrilin 2 	ENSMUST00000022947.5|Matn2|ENSMUSG00000022324.8|matrilin 2
