mm10_v2_chr15_-_91049823_91049948	0.733642	AGCAGCA	ENSMUST00000088614.5|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000100304.4|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000067205.8|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000109288.2|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A 	ENSMUST00000109287.2|Kif21a|ENSMUSG00000022629.10|kinesin family member 21A
mm10_v2_chr18_+_20944607_20944625	0.711048	AGCAGCA	ENSMUST00000050004.1|Rnf125|ENSMUSG00000033107.5|ring finger protein 125
mm10_v2_chr4_-_19708922_19709004	0.683835	AGCAGCA	ENSMUST00000108246.2|Wwp1|ENSMUSG00000041058.9|WW domain containing E3 ubiquitin protein ligase 1
mm10_v2_chr2_+_68117713_68117713	0.65522	AGCAGCA	ENSMUST00000112346.2|B3galt1|ENSMUSG00000034780.5|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm10_v2_chr10_-_53379816_53379858	0.643461	AGCAGCA	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr7_+_110018301_110018425	0.642625	AGCAGCA	ENSMUST00000084731.3|Ipo7|ENSMUSG00000066232.3|importin 7
mm10_v2_chr1_+_60181495_60181591	0.617196	AGCAGCA	ENSMUST00000160834.1|Nbeal1|ENSMUSG00000073664.5|neurobeachin like 1
mm10_v2_chr17_-_17624458_17624496	0.613963	AGCAGCA	ENSMUST00000041047.2|Lnpep|ENSMUSG00000023845.6|leucyl/cystinyl aminopeptidase
mm10_v2_chr12_+_52516077_52516077	0.59747	AGCAGCA	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr3_+_33799791_33799955	0.596646	AGCAGCA	ENSMUST00000099153.3|Ttc14|ENSMUSG00000027677.11|tetratricopeptide repeat domain 14
mm10_v2_chr1_-_162740350_162740533	0.596549	AGCAGCA	ENSMUST00000182331.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000183011.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000182593.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000182149.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C
mm10_v2_chr14_-_78536762_78536851	0.545587	AGCAGCA	ENSMUST00000123853.1|Akap11|ENSMUSG00000022016.9|A kinase (PRKA) anchor protein 11
mm10_v2_chr19_-_60790692_60790700	0.540627	AGCAGCA	ENSMUST00000025955.6|Eif3a|ENSMUSG00000024991.7|eukaryotic translation initiation factor 3, subunit A
mm10_v2_chr16_-_46010212_46010223	0.534301	AGCAGCA	ENSMUST00000130481.1|Plcxd2|ENSMUSG00000087141.1|phosphatidylinositol-specific phospholipase C, X domain containing 2
mm10_v2_chr16_+_77014069_77014069	0.527746	AGCAGCA	ENSMUST00000023580.6|Usp25|ENSMUSG00000022867.9|ubiquitin specific peptidase 25
mm10_v2_chr5_+_88886809_88886825	0.512306	AGCAGCA	ENSMUST00000148750.1|Slc4a4|ENSMUSG00000060961.8|solute carrier family 4 (anion exchanger), member 4
mm10_v2_chrX_+_38316177_38316193	0.511701	AGCAGCA	ENSMUST00000016471.2|Atp1b4|ENSMUSG00000016327.3|ATPase, (Na+)/K+ transporting, beta 4 polypeptide 	ENSMUST00000115134.1|Atp1b4|ENSMUSG00000016327.3|ATPase, (Na+)/K+ transporting, beta 4 polypeptide
mm10_v2_chr5_+_47984793_47984811	0.500459	AGCAGCA	ENSMUST00000170109.2|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila) 	ENSMUST00000174421.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila) 	ENSMUST00000173702.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila) 	ENSMUST00000173107.1|Slit2|ENSMUSG00000031558.9|slit homolog 2 (Drosophila)
mm10_v2_chr6_+_56714891_56714951	0.474019	AGCAGCA	ENSMUST00000031805.8|Avl9|ENSMUSG00000029787.8|AVL9 homolog (S. cerevisiase)
mm10_v2_chr11_-_20112876_20112925	0.471342	AGCAGCA	ENSMUST00000000137.7|Actr2|ENSMUSG00000020152.7|ARP2 actin-related protein 2
mm10_v2_chrY_-_1286563_1286615	0.466225	AGCAGCA	ENSMUST00000091190.5|Ddx3y|ENSMUSG00000069045.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
mm10_v2_chr14_+_84443553_84443568	0.461518	AGCAGCA	ENSMUST00000071370.5|Pcdh17|ENSMUSG00000035566.6|protocadherin 17
mm10_v2_chr8_+_71908595_71908657	0.460221	AGCAGCA	ENSMUST00000110002.1|Zfp882|ENSMUSG00000089857.3|zinc finger protein 882 	ENSMUST00000131544.1|Zfp617|ENSMUSG00000066880.9|zinc finger protein 617 	ENSMUST00000125802.1|Zfp882|ENSMUSG00000089857.3|zinc finger protein 882
mm10_v2_chr3_-_122984404_122984512	0.456027	AGCAGCA	ENSMUST00000090379.2|Usp53|ENSMUSG00000039701.7|ubiquitin specific peptidase 53
mm10_v2_chr17_-_42876417_42876431	0.453157	AGCAGCA	ENSMUST00000024709.7|Cd2ap|ENSMUSG00000061665.6|CD2-associated protein
mm10_v2_chr13_-_101768154_101768217	0.441245	AGCAGCA	ENSMUST00000055518.6|Pik3r1|ENSMUSG00000041417.9|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm10_v2_chr19_-_59943647_59943678	0.431085	AGCAGCA	ENSMUST00000171986.1|Rab11fip2|ENSMUSG00000040022.8|RAB11 family interacting protein 2 (class I)
mm10_v2_chr8_+_41239718_41239767	0.42716	AGCAGCA	ENSMUST00000045218.7|Pcm1|ENSMUSG00000031592.9|pericentriolar material 1
mm10_v2_chr14_+_56887795_56887795	0.423443	AGCAGCA	ENSMUST00000022511.8|Zmym2|ENSMUSG00000021945.8|zinc finger, MYM-type 2
mm10_v2_chr5_+_16553488_16553550	0.422665	AGCAGCA	ENSMUST00000030683.3|Hgf|ENSMUSG00000028864.3|hepatocyte growth factor
mm10_v2_chr8_-_89044162_89044195	0.421749	AGCAGCA	ENSMUST00000034090.6|Sall1|ENSMUSG00000031665.6|sal-like 1 (Drosophila)
mm10_v2_chr10_+_7681197_7681225	0.408914	AGCAGCA	ENSMUST00000165952.1|Lats1|ENSMUSG00000040021.6|large tumor suppressor
mm10_v2_chr6_-_134566913_134566995	0.40257	AGCAGCA	ENSMUST00000032322.8|Lrp6|ENSMUSG00000030201.9|low density lipoprotein receptor-related protein 6
mm10_v2_chr8_-_3279606_3279622	0.401699	AGCAGCA	ENSMUST00000091291.4|Insr|ENSMUSG00000005534.9|insulin receptor
mm10_v2_chr12_-_101913116_101913267	0.396362	AGCAGCA	ENSMUST00000177536.1|Trip11|ENSMUSG00000021188.8|thyroid hormone receptor interactor 11 	ENSMUST00000176728.1|Trip11|ENSMUSG00000021188.8|thyroid hormone receptor interactor 11 	ENSMUST00000021605.7|Trip11|ENSMUSG00000021188.8|thyroid hormone receptor interactor 11
mm10_v2_chr10_-_29535857_29535880	0.393199	AGCAGCA	ENSMUST00000092623.3|Rspo3|ENSMUSG00000019880.9|R-spondin 3 homolog (Xenopus laevis)
mm10_v2_chr8_+_111094630_111094641	0.392398	AGCAGCA	ENSMUST00000135302.1|Pdpr|ENSMUSG00000033624.4|pyruvate dehydrogenase phosphatase regulatory subunit 	ENSMUST00000039333.3|Pdpr|ENSMUSG00000033624.4|pyruvate dehydrogenase phosphatase regulatory subunit
mm10_v2_chr9_-_107872687_107872747	0.388456	AGCAGCA	ENSMUST00000035201.6|Rbm6|ENSMUSG00000032582.8|RNA binding motif protein 6
mm10_v2_chr16_+_45224315_45224346	0.388293	AGCAGCA	ENSMUST00000102802.3|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated 	ENSMUST00000063654.4|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated
mm10_v2_chr10_+_58255465_58255539	0.38633	AGCAGCA	ENSMUST00000057659.7|Gcc2|ENSMUSG00000038039.7|GRIP and coiled-coil domain containing 2 	ENSMUST00000162041.1|Gcc2|ENSMUSG00000038039.7|GRIP and coiled-coil domain containing 2 	ENSMUST00000162860.1|Gcc2|ENSMUSG00000038039.7|GRIP and coiled-coil domain containing 2
mm10_v2_chr5_-_76304474_76304548	0.385888	AGCAGCA	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chrX_-_136868537_136868755	0.377987	AGCAGCA	ENSMUST00000058814.6|Rab9b|ENSMUSG00000043463.6|RAB9B, member RAS oncogene family
mm10_v2_chr16_-_30388530_30388530	0.377625	AGCAGCA	ENSMUST00000100013.2|Atp13a3|ENSMUSG00000022533.7|ATPase type 13A3 	ENSMUST00000061350.6|Atp13a3|ENSMUSG00000022533.7|ATPase type 13A3
mm10_v2_chr11_+_108920342_108920358	0.376634	AGCAGCA	ENSMUST00000052915.7|Axin2|ENSMUSG00000000142.9|axin2
mm10_v2_chr2_-_65238625_65238643	0.369587	AGCAGCA	ENSMUST00000112429.2|Cobll1|ENSMUSG00000034903.12|Cobl-like 1 	ENSMUST00000102726.1|Cobll1|ENSMUSG00000034903.12|Cobl-like 1 	ENSMUST00000112430.1|Cobll1|ENSMUSG00000034903.12|Cobl-like 1
mm10_v2_chr7_-_116443439_116443462	0.368218	AGCAGCA	ENSMUST00000170430.1|Pik3c2a|ENSMUSG00000030660.8|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm10_v2_chr15_+_25622525_25622558	0.361493	AGCAGCA	ENSMUST00000110457.1|Myo10|ENSMUSG00000022272.11|myosin X 	ENSMUST00000137601.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr19_-_59345746_59345853	0.352606	AGCAGCA	ENSMUST00000099274.2|Pdzd8|ENSMUSG00000074746.2|PDZ domain containing 8
mm10_v2_chr1_-_161876656_161876682	0.352374	AGCAGCA	ENSMUST00000048377.5|Suco|ENSMUSG00000040297.7|SUN domain containing ossification factor
mm10_v2_chr2_-_161109017_161109027	0.349392	AGCAGCA	ENSMUST00000039782.7|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6 	ENSMUST00000134178.1|Chd6|ENSMUSG00000057133.8|chromodomain helicase DNA binding protein 6
mm10_v2_chr13_+_49421229_49421311	0.348104	AGCAGCA	ENSMUST00000021817.8|Ippk|ENSMUSG00000021385.9|inositol 1,3,4,5,6-pentakisphosphate 2-kinase
mm10_v2_chr3_+_145292472_145292536	0.339112	AGCAGCA	ENSMUST00000029848.4|Col24a1|ENSMUSG00000028197.4|collagen, type XXIV, alpha 1 	ENSMUST00000139001.1|Col24a1|ENSMUSG00000028197.4|collagen, type XXIV, alpha 1
mm10_v2_chr11_+_79993062_79993122	0.337573	AGCAGCA	ENSMUST00000017692.8|Suz12|ENSMUSG00000017548.9|suppressor of zeste 12 homolog (Drosophila) 	ENSMUST00000163272.1|Suz12|ENSMUSG00000017548.9|suppressor of zeste 12 homolog (Drosophila)
mm10_v2_chr2_-_70825726_70825820	0.332054	AGCAGCA	ENSMUST00000038584.8|Tlk1|ENSMUSG00000041997.10|tousled-like kinase 1
mm10_v2_chr8_+_90828820_90828842	0.331864	AGCAGCA	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr11_-_63922257_63922292	0.329211	AGCAGCA	ENSMUST00000094103.3|Hs3st3b1|ENSMUSG00000070407.5|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
mm10_v2_chr5_-_3803081_3803119	0.32569	AGCAGCA	ENSMUST00000043551.6|Ankib1|ENSMUSG00000040351.7|ankyrin repeat and IBR domain containing 1
mm10_v2_chr9_+_83548309_83548338	0.32204	AGCAGCA	ENSMUST00000113215.3|Sh3bgrl2|ENSMUSG00000032261.10|SH3 domain binding glutamic acid-rich protein like 2
mm10_v2_chr11_+_101176041_101176041	0.315088	AGCAGCA	ENSMUST00000103109.3|Cntnap1|ENSMUSG00000017167.6|contactin associated protein-like 1
mm10_v2_chr1_-_21961581_21961581	0.312908	AGCAGCA	ENSMUST00000029667.6|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173058.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173404.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5
mm10_v2_chr13_-_114932035_114932066	0.307967	AGCAGCA	ENSMUST00000056117.8|Itga2|ENSMUSG00000015533.8|integrin alpha 2
mm10_v2_chr4_-_11322109_11322146	0.30673	AGCAGCA	ENSMUST00000084892.5|Dpy19l4|ENSMUSG00000045205.10|dpy-19-like 4 (C. elegans) 	ENSMUST00000128024.1|Dpy19l4|ENSMUSG00000045205.10|dpy-19-like 4 (C. elegans)
mm10_v2_chr15_-_9529868_9529881	0.306372	AGCAGCA	ENSMUST00000003981.4|Il7r|ENSMUSG00000003882.4|interleukin 7 receptor
mm10_v2_chr16_+_38089001_38089064	0.301134	AGCAGCA	ENSMUST00000023507.6|Gsk3b|ENSMUSG00000022812.7|glycogen synthase kinase 3 beta
mm10_v2_chr9_-_95511897_95511996	0.300135	AGCAGCA	ENSMUST00000079659.5|U2surp|ENSMUSG00000032407.7|U2 snRNP-associated SURP domain containing 	ENSMUST00000078374.6|U2surp|ENSMUSG00000032407.7|U2 snRNP-associated SURP domain containing
mm10_v2_chr9_+_108692116_108692193	0.298223	AGCAGCA	ENSMUST00000035220.6|Prkar2a|ENSMUSG00000032601.8|protein kinase, cAMP dependent regulatory, type II alpha
mm10_v2_chrX_+_56346390_56346415	0.297649	AGCAGCA	ENSMUST00000101560.3|Zfp449|ENSMUSG00000073176.4|zinc finger protein 449
mm10_v2_chr2_+_48949495_48949522	0.297462	AGCAGCA	ENSMUST00000112745.1|Mbd5|ENSMUSG00000036792.6|methyl-CpG binding domain protein 5
mm10_v2_chr9_-_50727921_50728008	0.296421	AGCAGCA	ENSMUST00000118707.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000034566.8|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr1_-_111864869_111864929	0.296379	AGCAGCA	ENSMUST00000035462.5|Dsel|ENSMUSG00000038702.5|dermatan sulfate epimerase-like
mm10_v2_chr2_+_48814109_48814173	0.296044	AGCAGCA	ENSMUST00000063886.3|Acvr2a|ENSMUSG00000052155.5|activin receptor IIA
mm10_v2_chr5_-_25498702_25498745	0.295483	AGCAGCA	ENSMUST00000173073.1|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C 	ENSMUST00000045291.7|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C
mm10_v2_chr14_+_45351473_45351473	0.295055	AGCAGCA	ENSMUST00000111835.2|Styx|ENSMUSG00000053205.8|serine/threonine/tyrosine interaction protein
mm10_v2_chr12_+_16894894_16894978	0.294388	AGCAGCA	ENSMUST00000020904.6|Rock2|ENSMUSG00000020580.9|Rho-associated coiled-coil containing protein kinase 2
mm10_v2_chr3_-_122619663_122619680	0.294246	AGCAGCA	ENSMUST00000162409.1|Fnbp1l|ENSMUSG00000039735.9|formin binding protein 1-like
mm10_v2_chr2_-_13011747_13011778	0.29318	AGCAGCA	ENSMUST00000061545.5|C1ql3|ENSMUSG00000049630.5|C1q-like 3
mm10_v2_chr16_+_37868383_37868481	0.291721	AGCAGCA	ENSMUST00000078717.6|Lrrc58|ENSMUSG00000034158.9|leucine rich repeat containing 58
mm10_v2_chr1_-_170215380_170215420	0.291028	AGCAGCA	ENSMUST00000027979.7|Uhmk1|ENSMUSG00000026667.8|U2AF homology motif (UHM) kinase 1 	ENSMUST00000123399.1|Uhmk1|ENSMUSG00000026667.8|U2AF homology motif (UHM) kinase 1
mm10_v2_chr7_+_97579868_97579901	0.287964	AGCAGCA	ENSMUST00000042399.7|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1 	ENSMUST00000107153.1|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1
mm10_v2_chr5_+_12383156_12383177	0.285024	AGCAGCA	ENSMUST00000030868.6|Sema3d|ENSMUSG00000040254.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
mm10_v2_chr19_-_31765027_31765079	0.282064	AGCAGCA	ENSMUST00000065067.6|Prkg1|ENSMUSG00000052920.8|protein kinase, cGMP-dependent, type I
mm10_v2_chr5_+_105876532_105876585	0.280645	AGCAGCA	ENSMUST00000150440.1|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326 	ENSMUST00000031227.4|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326
mm10_v2_chr4_-_126968124_126968154	0.275541	AGCAGCA	ENSMUST00000106108.2|Zmym4|ENSMUSG00000042446.10|zinc finger, MYM-type 4
mm10_v2_chr7_+_130865756_130865812	0.273119	AGCAGCA	ENSMUST00000120441.1|Plekha1|ENSMUSG00000040268.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
mm10_v2_chr12_-_51829525_51829553	0.272564	AGCAGCA	ENSMUST00000179265.1|Hectd1|ENSMUSG00000035247.9|HECT domain containing 1 	ENSMUST00000042052.8|Hectd1|ENSMUSG00000035247.9|HECT domain containing 1
mm10_v2_chr5_+_43233463_43233491	0.270725	AGCAGCA	ENSMUST00000169035.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2 	ENSMUST00000166713.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2
mm10_v2_chr5_+_138085083_138085147	0.269095	AGCAGCA	ENSMUST00000019660.4|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1 	ENSMUST00000066617.5|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1 	ENSMUST00000110963.1|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1
mm10_v2_chr5_+_13399309_13399382	0.267641	AGCAGCA	ENSMUST00000030714.7|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 	ENSMUST00000141968.1|Sema3a|ENSMUSG00000028883.11|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm10_v2_chr16_-_8792302_8792326	0.267146	AGCAGCA	ENSMUST00000160405.1|Usp7|ENSMUSG00000022710.11|ubiquitin specific peptidase 7
mm10_v2_chr13_-_63565520_63565520	0.265663	AGCAGCA	ENSMUST00000021921.5|Ptch1|ENSMUSG00000021466.6|patched homolog 1
mm10_v2_chr9_+_18292267_18292334	0.264701	AGCAGCA	ENSMUST00000001825.7|Chordc1|ENSMUSG00000001774.7|cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1
mm10_v2_chr12_-_41485751_41485751	0.263587	AGCAGCA	ENSMUST00000043884.4|Lrrn3|ENSMUSG00000036295.4|leucine rich repeat protein 3, neuronal
mm10_v2_chr15_-_3583191_3583241	0.263103	AGCAGCA	ENSMUST00000069451.4|Ghr|ENSMUSG00000055737.6|growth hormone receptor
mm10_v2_chr14_+_26579535_26579612	0.262879	AGCAGCA	ENSMUST00000037585.7|Dennd6a|ENSMUSG00000040818.7|DENN/MADD domain containing 6A
mm10_v2_chr4_+_136469755_136469850	0.262035	AGCAGCA	ENSMUST00000170102.1|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1 	ENSMUST00000105849.2|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1 	ENSMUST00000129230.2|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1
mm10_v2_chr15_+_6708372_6708396	0.261817	AGCAGCA	ENSMUST00000061656.6|Rictor|ENSMUSG00000050310.8|RPTOR independent companion of MTOR, complex 2
mm10_v2_chr18_+_3383223_3383263	0.260084	AGCAGCA	ENSMUST00000162301.1|Cul2|ENSMUSG00000024231.8|cullin 2 	ENSMUST00000161317.1|Cul2|ENSMUSG00000024231.8|cullin 2
mm10_v2_chr13_+_96542727_96542775	0.25886	AGCAGCA	ENSMUST00000077672.4|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 	ENSMUST00000109444.2|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm10_v2_chr14_-_61439831_61439947	0.25821	AGCAGCA	ENSMUST00000022496.7|Kpna3|ENSMUSG00000021929.8|karyopherin (importin) alpha 3
mm10_v2_chr2_-_125859139_125859221	0.253035	AGCAGCA	ENSMUST00000110463.1|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana) 	ENSMUST00000028635.5|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)
mm10_v2_chr13_+_13590402_13590456	0.252949	AGCAGCA	ENSMUST00000110559.1|Lyst|ENSMUSG00000019726.10|lysosomal trafficking regulator
mm10_v2_chr18_+_10725530_10725564	0.25288	AGCAGCA	ENSMUST00000052838.4|Mib1|ENSMUSG00000024294.7|mindbomb homolog 1 (Drosophila)
mm10_v2_chr1_+_172521044_172521181	0.250575	AGCAGCA	ENSMUST00000085894.5|Ccdc19|ENSMUSG00000026546.10|coiled-coil domain containing 19 	ENSMUST00000161140.1|Ccdc19|ENSMUSG00000026546.10|coiled-coil domain containing 19 	ENSMUST00000162988.1|Ccdc19|ENSMUSG00000026546.10|coiled-coil domain containing 19
mm10_v2_chr1_+_85793411_85793541	0.248559	AGCAGCA	ENSMUST00000113360.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39 	ENSMUST00000126962.1|Cab39|ENSMUSG00000036707.10|calcium binding protein 39
mm10_v2_chr3_-_30969399_30969425	0.247711	AGCAGCA	ENSMUST00000177992.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000129817.2|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000168645.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000108255.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000064718.5|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000099163.3|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila)
mm10_v2_chrX_-_143827391_143827414	0.246348	AGCAGCA	ENSMUST00000087316.5|Capn6|ENSMUSG00000067276.5|calpain 6
mm10_v2_chr10_-_83337845_83337882	0.245754	AGCAGCA	ENSMUST00000039956.5|Slc41a2|ENSMUSG00000034591.5|solute carrier family 41, member 2
mm10_v2_chr10_+_20148920_20149014	0.245751	AGCAGCA	ENSMUST00000116259.3|Map7|ENSMUSG00000019996.10|microtubule-associated protein 7
mm10_v2_chr3_-_108146080_108146150	0.24317	AGCAGCA	ENSMUST00000000001.4|Gnai3|ENSMUSG00000000001.4|guanine nucleotide binding protein (G protein), alpha inhibiting 3
mm10_v2_chr6_-_5496296_5496316	0.241346	AGCAGCA	ENSMUST00000019721.4|Pdk4|ENSMUSG00000019577.4|pyruvate dehydrogenase kinase, isoenzyme 4
mm10_v2_chr3_+_103914560_103914605	0.239121	AGCAGCA	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr4_+_21848039_21848077	0.238888	AGCAGCA	ENSMUST00000098238.2|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18 	ENSMUST00000108229.1|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18
mm10_v2_chr3_-_104511812_104511933	0.236858	AGCAGCA	ENSMUST00000046316.6|Lrig2|ENSMUSG00000032913.9|leucine-rich repeats and immunoglobulin-like domains 2
mm10_v2_chr11_-_51756378_51756618	0.235977	AGCAGCA	ENSMUST00000109092.1|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000064297.4|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000109097.2|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae)
mm10_v2_chr17_-_46031813_46031863	0.235704	AGCAGCA	ENSMUST00000024747.7|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A
mm10_v2_chr14_-_93888732_93888732	0.235145	AGCAGCA	ENSMUST00000068992.2|Pcdh9|ENSMUSG00000055421.3|protocadherin 9
mm10_v2_chr8_+_79639618_79639730	0.233816	AGCAGCA	ENSMUST00000173078.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4 	ENSMUST00000173286.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4
mm10_v2_chr9_+_65032413_65032466	0.233417	AGCAGCA	ENSMUST00000034960.6|Dpp8|ENSMUSG00000032393.8|dipeptidylpeptidase 8
mm10_v2_chr10_-_5069044_5069079	0.23192	AGCAGCA	ENSMUST00000095899.3|Syne1|ENSMUSG00000019769.10|spectrin repeat containing, nuclear envelope 1
mm10_v2_chr3_+_145987835_145987901	0.231113	AGCAGCA	ENSMUST00000039517.6|Syde2|ENSMUSG00000036863.7|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
mm10_v2_chr7_+_101108768_101108783	0.230788	AGCAGCA	ENSMUST00000098250.3|Fchsd2|ENSMUSG00000030691.8|FCH and double SH3 domains 2 	ENSMUST00000032931.7|Fchsd2|ENSMUSG00000030691.8|FCH and double SH3 domains 2
mm10_v2_chr14_+_34673888_34673930	0.230394	AGCAGCA	ENSMUST00000048263.7|Wapal|ENSMUSG00000041408.10|wings apart-like homolog (Drosophila)
mm10_v2_chr15_-_100551959_100552010	0.229734	AGCAGCA	ENSMUST00000009877.6|Tfcp2|ENSMUSG00000009733.8|transcription factor CP2
mm10_v2_chr17_+_26715644_26715724	0.229449	AGCAGCA	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr2_-_165473187_165473230	0.227258	AGCAGCA	ENSMUST00000029208.8|Slc13a3|ENSMUSG00000018459.9|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 	ENSMUST00000109279.2|Slc13a3|ENSMUSG00000018459.9|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
mm10_v2_chr15_+_11064764_11064797	0.226668	AGCAGCA	ENSMUST00000061318.7|Adamts12|ENSMUSG00000047497.9|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
mm10_v2_chr2_+_69722797_69722840	0.220562	AGCAGCA	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr4_+_100095791_100095867	0.22036	AGCAGCA	ENSMUST00000039630.5|Ror1|ENSMUSG00000035305.5|receptor tyrosine kinase-like orphan receptor 1
mm10_v2_chr19_+_38395980_38396022	0.219414	AGCAGCA	ENSMUST00000054098.2|Slc35g1|ENSMUSG00000044026.2|solute carrier family 35, member G1
mm10_v2_chr7_+_110221697_110221708	0.217888	AGCAGCA	ENSMUST00000033325.7|Swap70|ENSMUSG00000031015.7|SWA-70 protein
mm10_v2_chr5_+_86804214_86804276	0.215731	AGCAGCA	ENSMUST00000119339.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1 	ENSMUST00000120498.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1
mm10_v2_chr16_-_64786321_64786321	0.214937	AGCAGCA	ENSMUST00000052588.4|Zfp654|ENSMUSG00000047141.4|zinc finger protein 654
mm10_v2_chr8_-_87804411_87804463	0.213712	AGCAGCA	ENSMUST00000165770.2|Zfp423|ENSMUSG00000045333.9|zinc finger protein 423
mm10_v2_chr4_+_136286061_136286114	0.213596	AGCAGCA	ENSMUST00000069195.4|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46 	ENSMUST00000130658.1|Zfp46|ENSMUSG00000051351.8|zinc finger protein 46
mm10_v2_chr13_-_64153194_64153207	0.211485	AGCAGCA	ENSMUST00000059817.4|Zfp367|ENSMUSG00000044934.6|zinc finger protein 367 	ENSMUST00000117241.1|Zfp367|ENSMUSG00000044934.6|zinc finger protein 367
mm10_v2_chr2_+_117121374_117121374	0.208892	AGCAGCA	ENSMUST00000028829.6|Spred1|ENSMUSG00000027351.8|sprouty protein with EVH-1 domain 1, related sequence
mm10_v2_chrX_-_51018011_51018032	0.20844	AGCAGCA	ENSMUST00000053593.7|Rap2c|ENSMUSG00000050029.7|RAP2C, member of RAS oncogene family
mm10_v2_chr18_+_21001292_21001341	0.208421	AGCAGCA	ENSMUST00000072847.5|Rnf138|ENSMUSG00000024317.8|ring finger protein 138 	ENSMUST00000052396.5|Rnf138|ENSMUSG00000024317.8|ring finger protein 138
mm10_v2_chr6_+_114131229_114131246	0.208341	AGCAGCA	ENSMUST00000032451.7|Slc6a11|ENSMUSG00000030307.7|solute carrier family 6 (neurotransmitter transporter, GABA), member 11
mm10_v2_chr1_-_119837613_119837673	0.206445	AGCAGCA	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr9_-_70503718_70503805	0.205691	AGCAGCA	ENSMUST00000034739.5|Rnf111|ENSMUSG00000032217.6|ring finger 111
mm10_v2_chrX_+_36328353_36328418	0.205647	AGCAGCA	ENSMUST00000016383.3|Lonrf3|ENSMUSG00000016239.5|LON peptidase N-terminal domain and ring finger 3
mm10_v2_chr11_+_53350783_53350833	0.204948	AGCAGCA	ENSMUST00000060945.5|Aff4|ENSMUSG00000049470.7|AF4/FMR2 family, member 4
mm10_v2_chr8_-_83458386_83458397	0.203717	AGCAGCA	ENSMUST00000081506.3|Scoc|ENSMUSG00000063253.4|short coiled-coil protein
mm10_v2_chr6_-_143947092_143947111	0.203376	AGCAGCA	ENSMUST00000144289.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000111748.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr12_-_69681795_69681869	0.202596	AGCAGCA	ENSMUST00000183277.1|Sos2|ENSMUSG00000034801.7|son of sevenless homolog 2 (Drosophila) 	ENSMUST00000035773.7|Sos2|ENSMUSG00000034801.7|son of sevenless homolog 2 (Drosophila)
mm10_v2_chr5_+_30232581_30232680	0.202341	AGCAGCA	ENSMUST00000145167.1|Ept1|ENSMUSG00000075703.9|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
mm10_v2_chr10_+_4266323_4266341	0.200899	AGCAGCA	ENSMUST00000045730.5|Akap12|ENSMUSG00000038587.8|A kinase (PRKA) anchor protein (gravin) 12
mm10_v2_chr6_+_29768443_29768542	0.199833	AGCAGCA	ENSMUST00000166718.1|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000102995.2|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2 	ENSMUST00000115242.2|Ahcyl2|ENSMUSG00000029772.11|S-adenosylhomocysteine hydrolase-like 2
mm10_v2_chr1_-_46854046_46854079	0.199522	AGCAGCA	ENSMUST00000027131.4|Slc39a10|ENSMUSG00000025986.5|solute carrier family 39 (zinc transporter), member 10
mm10_v2_chrX_-_21089229_21089229	0.199216	AGCAGCA	ENSMUST00000040667.6|Zfp300|ENSMUSG00000031079.6|zinc finger protein 300
mm10_v2_chr14_-_33447142_33447179	0.199206	AGCAGCA	ENSMUST00000111944.3|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8 	ENSMUST00000022504.5|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8 	ENSMUST00000111945.2|Mapk8|ENSMUSG00000021936.7|mitogen-activated protein kinase 8
mm10_v2_chr5_-_107289561_107289637	0.198772	AGCAGCA	ENSMUST00000031224.8|Tgfbr3|ENSMUSG00000029287.8|transforming growth factor, beta receptor III
mm10_v2_chr2_-_131352857_131352889	0.198297	AGCAGCA	ENSMUST00000059372.4|Rnf24|ENSMUSG00000048911.9|ring finger protein 24
mm10_v2_chr2_+_156196642_156196775	0.198089	AGCAGCA	ENSMUST00000037401.8|Phf20|ENSMUSG00000038116.10|PHD finger protein 20
mm10_v2_chr19_+_28990476_28990497	0.19531	AGCAGCA	ENSMUST00000050148.3|Cdc37l1|ENSMUSG00000024780.6|cell division cycle 37-like 1
mm10_v2_chr2_+_49619277_49619343	0.194897	AGCAGCA	ENSMUST00000028102.7|Kif5c|ENSMUSG00000026764.9|kinesin family member 5C
mm10_v2_chrX_+_85574018_85574150	0.19483	AGCAGCA	ENSMUST00000048250.3|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3 	ENSMUST00000137438.1|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3 	ENSMUST00000146063.1|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3
mm10_v2_chr2_-_60963192_60963251	0.194775	AGCAGCA	ENSMUST00000028347.6|Rbms1|ENSMUSG00000026970.10|RNA binding motif, single stranded interacting protein 1
mm10_v2_chr2_-_39065438_39065503	0.19467	AGCAGCA	ENSMUST00000112850.2|Golga1|ENSMUSG00000026754.10|golgi autoantigen, golgin subfamily a, 1
mm10_v2_chr3_+_108591279_108591414	0.192211	AGCAGCA	ENSMUST00000051145.8|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47 	ENSMUST00000139626.1|Wdr47|ENSMUSG00000040389.9|WD repeat domain 47
mm10_v2_chr11_-_104550460_104550560	0.192136	AGCAGCA	ENSMUST00000106961.1|Cdc27|ENSMUSG00000020687.7|cell division cycle 27 	ENSMUST00000093923.2|Cdc27|ENSMUSG00000020687.7|cell division cycle 27
mm10_v2_chr3_-_108840477_108840511	0.19187	AGCAGCA	ENSMUST00000106596.3|Stxbp3a|ENSMUSG00000027882.12|syntaxin binding protein 3A 	ENSMUST00000102621.4|Stxbp3a|ENSMUSG00000027882.12|syntaxin binding protein 3A
mm10_v2_chr7_+_59228743_59228769	0.191782	AGCAGCA	ENSMUST00000107537.1|Ube3a|ENSMUSG00000025326.8|ubiquitin protein ligase E3A
mm10_v2_chr17_-_15375969_15375983	0.190431	AGCAGCA	ENSMUST00000014917.7|Dll1|ENSMUSG00000014773.7|delta-like 1 (Drosophila)
mm10_v2_chrX_+_159255782_159255899	0.18956	AGCAGCA	ENSMUST00000126686.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3 	ENSMUST00000033671.6|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chr19_+_36926071_36926177	0.189032	AGCAGCA	ENSMUST00000099494.3|Btaf1|ENSMUSG00000040565.7|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)
mm10_v2_chrX_+_13071500_13071576	0.18789	AGCAGCA	ENSMUST00000089302.4|Usp9x|ENSMUSG00000031010.11|ubiquitin specific peptidase 9, X chromosome
mm10_v2_chr15_+_103240405_103240432	0.187637	AGCAGCA	ENSMUST00000036004.9|Hnrnpa1|ENSMUSG00000046434.9|heterogeneous nuclear ribonucleoprotein A1 	ENSMUST00000087351.7|Hnrnpa1|ENSMUSG00000046434.9|heterogeneous nuclear ribonucleoprotein A1
mm10_v2_chr5_+_3543812_3543853	0.187115	AGCAGCA	ENSMUST00000115527.3|Fam133b|ENSMUSG00000058503.7|family with sequence similarity 133, member B
mm10_v2_chr1_-_165934900_165935036	0.186944	AGCAGCA	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr5_+_73491026_73491110	0.186342	AGCAGCA	ENSMUST00000063882.5|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) 	ENSMUST00000113558.1|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
mm10_v2_chr2_-_26445175_26445226	0.185284	AGCAGCA	ENSMUST00000114082.2|Sec16a|ENSMUSG00000026924.11|SEC16 homolog A (S. cerevisiae) 	ENSMUST00000091252.4|Sec16a|ENSMUSG00000026924.11|SEC16 homolog A (S. cerevisiae)
mm10_v2_chr8_-_25785154_25785215	0.184249	AGCAGCA	ENSMUST00000038498.8|Bag4|ENSMUSG00000037316.8|BCL2-associated athanogene 4
mm10_v2_chr1_+_93478964_93479108	0.183295	AGCAGCA	ENSMUST00000027495.8|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000136182.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000131175.2|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000179353.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000172165.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000153826.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000129211.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000168776.1|Sept2|ENSMUSG00000026276.11|septin 2 	ENSMUST00000112912.1|Sept2|ENSMUSG00000026276.11|septin 2
mm10_v2_chr11_-_23665862_23665959	0.182724	AGCAGCA	ENSMUST00000020523.3|Pex13|ENSMUSG00000020283.5|peroxisomal biogenesis factor 13
mm10_v2_chr18_+_64340225_64340364	0.182224	AGCAGCA	ENSMUST00000175965.2|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2 	ENSMUST00000115145.3|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2
mm10_v2_chr6_+_145746739_145746767	0.182061	AGCAGCA	ENSMUST00000111704.1|Rassf8|ENSMUSG00000030259.6|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
mm10_v2_chr12_-_87200200_87200284	0.181292	AGCAGCA	ENSMUST00000037418.5|Tmed8|ENSMUSG00000034111.5|transmembrane emp24 domain containing 8
mm10_v2_chr18_+_77065195_77065250	0.180478	AGCAGCA	ENSMUST00000114777.2|Pias2|ENSMUSG00000025423.9|protein inhibitor of activated STAT 2
mm10_v2_chr9_-_82975475_82975493	0.180091	AGCAGCA	ENSMUST00000034787.5|Phip|ENSMUSG00000032253.7|pleckstrin homology domain interacting protein
mm10_v2_chr6_-_39725448_39725478	0.179894	AGCAGCA	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr11_+_77686155_77686179	0.17982	AGCAGCA	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr13_+_47122719_47122761	0.179769	AGCAGCA	ENSMUST00000068891.4|Rnf144b|ENSMUSG00000038068.8|ring finger protein 144B
mm10_v2_chr16_+_24393350_24393428	0.17941	AGCAGCA	ENSMUST00000038053.6|Lpp|ENSMUSG00000033306.8|LIM domain containing preferred translocation partner in lipoma
mm10_v2_chr9_-_54661870_54661912	0.179101	AGCAGCA	ENSMUST00000034822.5|Acsbg1|ENSMUSG00000032281.5|acyl-CoA synthetase bubblegum family member 1
mm10_v2_chr10_-_123196916_123196961	0.178003	AGCAGCA	ENSMUST00000020334.7|Usp15|ENSMUSG00000020124.9|ubiquitin specific peptidase 15
mm10_v2_chr10_-_13324160_13324242	0.177573	AGCAGCA	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr13_+_41249841_41249863	0.177529	AGCAGCA	ENSMUST00000165561.2|Smim13|ENSMUSG00000091264.2|small integral membrane protein 13
mm10_v2_chr5_+_146231211_146231385	0.177366	AGCAGCA	ENSMUST00000161181.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000161652.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000031640.8|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000159467.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8
mm10_v2_chr5_+_123142187_123142229	0.176511	AGCAGCA	ENSMUST00000174836.1|Setd1b|ENSMUSG00000038384.10|SET domain containing 1B 	ENSMUST00000163030.2|Setd1b|ENSMUSG00000038384.10|SET domain containing 1B
mm10_v2_chr5_+_15934685_15934696	0.176216	AGCAGCA	ENSMUST00000078272.6|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000180204.1|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000167946.2|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000101581.3|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000039370.7|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1
mm10_v2_chr4_-_126429501_126429556	0.176197	AGCAGCA	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr8_-_47352348_47352367	0.175001	AGCAGCA	ENSMUST00000110367.2|Stox2|ENSMUSG00000038143.8|storkhead box 2
mm10_v2_chr7_+_92741603_92741715	0.173988	AGCAGCA	ENSMUST00000032879.7|Rab30|ENSMUSG00000030643.7|RAB30, member RAS oncogene family
mm10_v2_chr9_-_36726374_36726658	0.173445	AGCAGCA	ENSMUST00000172702.2|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1 	ENSMUST00000172742.1|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1 	ENSMUST00000034625.5|Chek1|ENSMUSG00000032113.9|checkpoint kinase 1
mm10_v2_chr15_+_58415456_58415512	0.172684	AGCAGCA	ENSMUST00000037270.3|D15Ertd621e|ENSMUSG00000037119.3|DNA segment, Chr 15, ERATO Doi 621, expressed
mm10_v2_chr4_+_137468767_137468831	0.170624	AGCAGCA	ENSMUST00000030547.8|Hspg2|ENSMUSG00000028763.11|perlecan (heparan sulfate proteoglycan 2) 	ENSMUST00000171332.1|Hspg2|ENSMUSG00000028763.11|perlecan (heparan sulfate proteoglycan 2)
mm10_v2_chr2_-_37647199_37647285	0.169812	AGCAGCA	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr4_+_101419277_101419332	0.169449	AGCAGCA	ENSMUST00000102780.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106946.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106945.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4
mm10_v2_chr1_-_166002591_166002609	0.169338	AGCAGCA	ENSMUST00000111429.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000176800.1|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr16_+_13671858_13671918	0.169006	AGCAGCA	ENSMUST00000023365.6|Bfar|ENSMUSG00000022684.8|bifunctional apoptosis regulator
mm10_v2_chr14_-_52197216_52197267	0.168481	AGCAGCA	ENSMUST00000046709.7|Supt16|ENSMUSG00000035726.7|suppressor of Ty 16
mm10_v2_chr12_-_84876479_84876532	0.168446	AGCAGCA	ENSMUST00000163189.1|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2 	ENSMUST00000110254.2|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2 	ENSMUST00000002073.6|Ltbp2|ENSMUSG00000002020.9|latent transforming growth factor beta binding protein 2
mm10_v2_chr9_+_68653761_68653786	0.167272	AGCAGCA	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
mm10_v2_chr7_-_118491912_118491975	0.165874	AGCAGCA	ENSMUST00000178344.1|Itpripl2|ENSMUSG00000095115.1|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm10_v2_chr6_-_56797637_56797757	0.165603	AGCAGCA	ENSMUST00000114323.1|Kbtbd2|ENSMUSG00000059486.5|kelch repeat and BTB (POZ) domain containing 2
mm10_v2_chr6_-_84593810_84593922	0.165335	AGCAGCA	ENSMUST00000077705.3|Cyp26b1|ENSMUSG00000063415.6|cytochrome P450, family 26, subfamily b, polypeptide 1 	ENSMUST00000168003.2|Cyp26b1|ENSMUSG00000063415.6|cytochrome P450, family 26, subfamily b, polypeptide 1
mm10_v2_chr2_+_69897220_69897247	0.165151	AGCAGCA	ENSMUST00000055758.9|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3 	ENSMUST00000112251.2|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr8_+_106935720_106935776	0.164613	AGCAGCA	ENSMUST00000047425.3|Sntb2|ENSMUSG00000041308.5|syntrophin, basic 2
mm10_v2_chr8_+_40862379_40862578	0.164537	AGCAGCA	ENSMUST00000098816.3|Slc7a2|ENSMUSG00000031596.9|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 	ENSMUST00000057784.8|Slc7a2|ENSMUSG00000031596.9|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 	ENSMUST00000141505.1|Slc7a2|ENSMUSG00000031596.9|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
mm10_v2_chr10_+_41519493_41519516	0.164515	AGCAGCA	ENSMUST00000019962.8|Cd164|ENSMUSG00000019818.9|CD164 antigen
mm10_v2_chr18_+_57878620_57878678	0.163291	AGCAGCA	ENSMUST00000115366.2|Slc12a2|ENSMUSG00000024597.10|solute carrier family 12, member 2
mm10_v2_chr1_-_9700209_9700329	0.163011	AGCAGCA	ENSMUST00000088658.4|Mybl1|ENSMUSG00000025912.10|myeloblastosis oncogene-like 1
mm10_v2_chr7_+_112679314_112679325	0.16231	AGCAGCA	ENSMUST00000084705.5|Tead1|ENSMUSG00000055320.10|TEA domain family member 1 	ENSMUST00000059768.10|Tead1|ENSMUSG00000055320.10|TEA domain family member 1
mm10_v2_chr1_+_187997821_187997834	0.161691	AGCAGCA	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr17_+_64600702_64600739	0.161684	AGCAGCA	ENSMUST00000086723.3|Man2a1|ENSMUSG00000024085.7|mannosidase 2, alpha 1
mm10_v2_chr5_+_93093428_93093457	0.159531	AGCAGCA	ENSMUST00000074733.7|Sept11|ENSMUSG00000058013.8|septin 11
mm10_v2_chr12_+_32953874_32953891	0.157656	AGCAGCA	ENSMUST00000076698.5|Sypl|ENSMUSG00000020570.8|synaptophysin-like protein
mm10_v2_chr6_+_143167210_143167267	0.155306	AGCAGCA	ENSMUST00000032413.4|Etnk1|ENSMUSG00000030275.4|ethanolamine kinase 1
mm10_v2_chrX_-_72274747_72274803	0.155072	AGCAGCA	ENSMUST00000064780.3|Gabre|ENSMUSG00000031340.8|gamma-aminobutyric acid (GABA) A receptor, subunit epsilon
mm10_v2_chr5_-_146795002_146795009	0.153679	AGCAGCA	ENSMUST00000085614.5|Usp12|ENSMUSG00000029640.11|ubiquitin specific peptidase 12
mm10_v2_chr19_+_29522263_29522341	0.153282	AGCAGCA	ENSMUST00000043610.6|C030046E11Rik|ENSMUSG00000038658.9|RIKEN cDNA C030046E11 gene 	ENSMUST00000162184.1|C030046E11Rik|ENSMUSG00000038658.9|RIKEN cDNA C030046E11 gene
mm10_v2_chr4_-_73790602_73790709	0.151249	AGCAGCA	ENSMUST00000058292.6|Rasef|ENSMUSG00000043003.7|RAS and EF hand domain containing 	ENSMUST00000102837.2|Rasef|ENSMUSG00000043003.7|RAS and EF hand domain containing
mm10_v2_chr6_+_54816906_54816920	0.148846	AGCAGCA	ENSMUST00000079869.6|Znrf2|ENSMUSG00000058446.8|zinc and ring finger 2
mm10_v2_chr5_+_121711609_121711609	0.148702	AGCAGCA	ENSMUST00000051950.7|Atxn2|ENSMUSG00000042605.9|ataxin 2
mm10_v2_chr9_+_92457369_92457389	0.14851	AGCAGCA	ENSMUST00000034941.7|Plscr4|ENSMUSG00000032377.7|phospholipid scramblase 4
mm10_v2_chr4_+_85205417_85205535	0.148017	AGCAGCA	ENSMUST00000030212.8|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2 	ENSMUST00000107189.1|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2 	ENSMUST00000107184.1|Sh3gl2|ENSMUSG00000028488.9|SH3-domain GRB2-like 2
mm10_v2_chr8_-_69996326_69996379	0.146797	AGCAGCA	ENSMUST00000177851.1|Gatad2a|ENSMUSG00000036180.8|GATA zinc finger domain containing 2A 	ENSMUST00000065169.4|Gatad2a|ENSMUSG00000036180.8|GATA zinc finger domain containing 2A
mm10_v2_chr6_+_149408973_149409038	0.146788	AGCAGCA	ENSMUST00000086829.4|Bicd1|ENSMUSG00000003452.9|bicaudal D homolog 1 (Drosophila) 	ENSMUST00000111513.2|Bicd1|ENSMUSG00000003452.9|bicaudal D homolog 1 (Drosophila)
mm10_v2_chr5_-_75978447_75978463	0.143306	AGCAGCA	ENSMUST00000113516.1|Kdr|ENSMUSG00000062960.7|kinase insert domain protein receptor
mm10_v2_chr5_-_107875035_107875107	0.142935	AGCAGCA	ENSMUST00000138111.1|Evi5|ENSMUSG00000011831.10|ecotropic viral integration site 5 	ENSMUST00000112642.1|Evi5|ENSMUSG00000011831.10|ecotropic viral integration site 5
mm10_v2_chr18_-_46198810_46198824	0.142597	AGCAGCA	ENSMUST00000167364.1|Trim36|ENSMUSG00000033949.5|tripartite motif-containing 36
mm10_v2_chr1_+_62703285_62703317	0.14113	AGCAGCA	ENSMUST00000102822.2|Nrp2|ENSMUSG00000025969.9|neuropilin 2 	ENSMUST00000075144.5|Nrp2|ENSMUSG00000025969.9|neuropilin 2
mm10_v2_chr6_-_113195380_113195387	0.140136	AGCAGCA	ENSMUST00000162280.1|Lhfpl4|ENSMUSG00000042873.10|lipoma HMGIC fusion partner-like protein 4
mm10_v2_chr19_+_4711153_4711258	0.138379	AGCAGCA	ENSMUST00000008991.6|Sptbn2|ENSMUSG00000067889.4|spectrin beta, non-erythrocytic 2
mm10_v2_chr14_-_45530118_45530182	0.136828	AGCAGCA	ENSMUST00000045905.6|Fermt2|ENSMUSG00000037712.9|fermitin family homolog 2 (Drosophila)
mm10_v2_chr6_-_32588192_32588213	0.136374	AGCAGCA	ENSMUST00000115096.2|Plxna4|ENSMUSG00000029765.10|plexin A4
mm10_v2_chr6_+_134830145_134830179	0.135671	AGCAGCA	ENSMUST00000046303.5|Crebl2|ENSMUSG00000032652.7|cAMP responsive element binding protein-like 2
mm10_v2_chr10_-_112928974_112929026	0.135189	AGCAGCA	ENSMUST00000099276.2|Atxn7l3b|ENSMUSG00000074748.2|ataxin 7-like 3B
mm10_v2_chr9_+_45138437_45138462	0.133556	AGCAGCA	ENSMUST00000060125.5|Scn4b|ENSMUSG00000046480.5|sodium channel, type IV, beta
mm10_v2_chr11_-_107131922_107131954	0.131562	AGCAGCA	ENSMUST00000057892.8|Bptf|ENSMUSG00000040481.10|bromodomain PHD finger transcription factor
mm10_v2_chr9_+_32116040_32116136	0.128897	AGCAGCA	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr5_-_96161990_96162097	0.127106	AGCAGCA	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chrX_+_106027300_106027323	0.126575	AGCAGCA	ENSMUST00000055941.6|Atp7a|ENSMUSG00000033792.6|ATPase, Cu++ transporting, alpha polypeptide
mm10_v2_chr7_-_73541738_73541758	0.12562	AGCAGCA	ENSMUST00000169922.2|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr1_+_55131231_55131249	0.12561	AGCAGCA	ENSMUST00000162364.1|Mob4|ENSMUSG00000025979.7|MOB family member 4, phocein 	ENSMUST00000159311.1|Mob4|ENSMUSG00000025979.7|MOB family member 4, phocein
mm10_v2_chr1_-_106759727_106759748	0.125092	AGCAGCA	ENSMUST00000010049.4|Kdsr|ENSMUSG00000009905.4|3-ketodihydrosphingosine reductase
mm10_v2_chr3_-_27710413_27710467	0.123084	AGCAGCA	ENSMUST00000046157.4|Fndc3b|ENSMUSG00000039286.7|fibronectin type III domain containing 3B
mm10_v2_chr19_+_5447692_5447711	0.122958	AGCAGCA	ENSMUST00000025850.5|Fosl1|ENSMUSG00000024912.5|fos-like antigen 1
mm10_v2_chr3_+_32817520_32817576	0.122556	AGCAGCA	ENSMUST00000072312.5|Usp13|ENSMUSG00000056900.7|ubiquitin specific peptidase 13 (isopeptidase T-3) 	ENSMUST00000108228.1|Usp13|ENSMUSG00000056900.7|ubiquitin specific peptidase 13 (isopeptidase T-3)
mm10_v2_chr5_+_123343834_123343970	0.121451	AGCAGCA	ENSMUST00000120593.1|Bcl7a|ENSMUSG00000029438.3|B cell CLL/lymphoma 7A
mm10_v2_chr19_-_43388292_43388311	0.121193	AGCAGCA	ENSMUST00000099428.3|Hpse2|ENSMUSG00000074852.3|heparanase 2
mm10_v2_chr6_-_42373254_42373274	0.121157	AGCAGCA	ENSMUST00000073387.2|Epha1|ENSMUSG00000029859.4|Eph receptor A1
mm10_v2_chr11_+_87592145_87592229	0.120928	AGCAGCA	ENSMUST00000103179.3|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4 	ENSMUST00000092802.5|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4 	ENSMUST00000146871.1|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4
mm10_v2_chr9_+_31386187_31386235	0.119636	AGCAGCA	ENSMUST00000086167.5|Nfrkb|ENSMUSG00000042185.7|nuclear factor related to kappa B binding protein
mm10_v2_chr2_-_33468493_33468572	0.118653	AGCAGCA	ENSMUST00000113156.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000028125.5|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000126442.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43
mm10_v2_chr18_+_36281069_36281151	0.118387	AGCAGCA	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chrX_-_95444789_95444872	0.117981	AGCAGCA	ENSMUST00000084535.5|Amer1|ENSMUSG00000050332.7|APC membrane recruitment 1
mm10_v2_chr15_+_66891477_66891508	0.117672	AGCAGCA	ENSMUST00000118823.1|Wisp1|ENSMUSG00000005124.3|WNT1 inducible signaling pathway protein 1
mm10_v2_chr2_+_144527718_144527773	0.117357	AGCAGCA	ENSMUST00000028914.2|Polr3f|ENSMUSG00000027427.7|polymerase (RNA) III (DNA directed) polypeptide F 	ENSMUST00000110017.2|Polr3f|ENSMUSG00000027427.7|polymerase (RNA) III (DNA directed) polypeptide F
mm10_v2_chr7_-_127824469_127824580	0.116878	AGCAGCA	ENSMUST00000106267.3|Stx1b|ENSMUSG00000030806.5|syntaxin 1B
mm10_v2_chr2_-_17731035_17731087	0.11669	AGCAGCA	ENSMUST00000028080.5|Nebl|ENSMUSG00000053702.10|nebulette
mm10_v2_chr11_+_75193783_75193864	0.116067	AGCAGCA	ENSMUST00000102514.3|Rtn4rl1|ENSMUSG00000045287.6|reticulon 4 receptor-like 1
mm10_v2_chr3_+_9250602_9250602	0.11579	AGCAGCA	ENSMUST00000155203.1|Zbtb10|ENSMUSG00000069114.8|zinc finger and BTB domain containing 10
mm10_v2_chr11_-_6475992_6476102	0.115434	AGCAGCA	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr1_+_64690443_64690467	0.115325	AGCAGCA	ENSMUST00000114077.1|Ccnyl1|ENSMUSG00000070871.4|cyclin Y-like 1
mm10_v2_chr2_+_124610573_124610613	0.115195	AGCAGCA	ENSMUST00000103239.3|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 	ENSMUST00000103240.2|Sema6d|ENSMUSG00000027200.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm10_v2_chr4_-_134287215_134287258	0.11431	AGCAGCA	ENSMUST00000145006.1|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000105877.2|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000127857.1|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000105876.2|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like
mm10_v2_chr4_+_28813125_28813136	0.112942	AGCAGCA	ENSMUST00000029964.5|Epha7|ENSMUSG00000028289.6|Eph receptor A7 	ENSMUST00000080934.4|Epha7|ENSMUSG00000028289.6|Eph receptor A7
mm10_v2_chr4_-_114987220_114987256	0.112273	AGCAGCA	ENSMUST00000030491.8|Cmpk1|ENSMUSG00000028719.8|cytidine monophosphate (UMP-CMP) kinase 1
mm10_v2_chr11_-_108343917_108343941	0.111319	AGCAGCA	ENSMUST00000059595.4|Prkca|ENSMUSG00000050965.8|protein kinase C, alpha
mm10_v2_chrX_-_142390334_142390345	0.110901	AGCAGCA	ENSMUST00000112907.1|Acsl4|ENSMUSG00000031278.6|acyl-CoA synthetase long-chain family member 4
mm10_v2_chr8_-_4779513_4779591	0.109941	AGCAGCA	ENSMUST00000022945.7|Shcbp1|ENSMUSG00000022322.7|Shc SH2-domain binding protein 1
mm10_v2_chr14_-_70599832_70599887	0.109936	AGCAGCA	ENSMUST00000022690.9|Fam160b2|ENSMUSG00000022095.9|family with sequence similarity 160, member B2
mm10_v2_chr1_+_194619815_194619833	0.10939	AGCAGCA	ENSMUST00000027952.5|Plxna2|ENSMUSG00000026640.6|plexin A2
mm10_v2_chr9_-_14614949_14615034	0.109304	AGCAGCA	ENSMUST00000013220.6|Amotl1|ENSMUSG00000013076.9|angiomotin-like 1 	ENSMUST00000160770.1|Amotl1|ENSMUSG00000013076.9|angiomotin-like 1
mm10_v2_chr4_+_105157339_105157354	0.108903	AGCAGCA	ENSMUST00000064139.7|Ppap2b|ENSMUSG00000028517.8|phosphatidic acid phosphatase type 2B
mm10_v2_chr15_-_58076183_58076245	0.108819	AGCAGCA	ENSMUST00000177504.2|9130401M01Rik|ENSMUSG00000022362.7|RIKEN cDNA 9130401M01 gene 	ENSMUST00000176076.1|9130401M01Rik|ENSMUSG00000022362.7|RIKEN cDNA 9130401M01 gene 	ENSMUST00000177176.1|9130401M01Rik|ENSMUSG00000022362.7|RIKEN cDNA 9130401M01 gene 	ENSMUST00000177276.1|Zhx1|ENSMUSG00000022361.8|zinc fingers and homeoboxes 1 	ENSMUST00000175805.2|Zhx1|ENSMUSG00000022361.8|zinc fingers and homeoboxes 1
mm10_v2_chr3_-_69127098_69127113	0.10821	AGCAGCA	ENSMUST00000029353.2|Kpna4|ENSMUSG00000027782.4|karyopherin (importin) alpha 4
mm10_v2_chr1_-_182019927_182019989	0.107572	AGCAGCA	ENSMUST00000078719.6|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111030.3|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000177811.1|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111024.3|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila) 	ENSMUST00000111025.2|Enah|ENSMUSG00000022995.10|enabled homolog (Drosophila)
mm10_v2_chrX_-_95166307_95166539	0.107061	AGCAGCA	ENSMUST00000113873.2|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113876.2|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113885.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113883.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000182001.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113882.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000113878.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9 	ENSMUST00000182562.1|Arhgef9|ENSMUSG00000025656.11|CDC42 guanine nucleotide exchange factor (GEF) 9
mm10_v2_chr1_-_155417283_155417323	0.106718	AGCAGCA	ENSMUST00000027741.5|Xpr1|ENSMUSG00000026469.8|xenotropic and polytropic retrovirus receptor 1
mm10_v2_chr3_+_96645579_96645608	0.106471	AGCAGCA	ENSMUST00000119365.1|Itga10|ENSMUSG00000090210.1|integrin, alpha 10 	ENSMUST00000029744.5|Itga10|ENSMUSG00000090210.1|integrin, alpha 10
mm10_v2_chr8_+_108714644_108714644	0.106303	AGCAGCA	ENSMUST00000043896.8|Zfhx3|ENSMUSG00000038872.8|zinc finger homeobox 3
mm10_v2_chrX_+_68821093_68821093	0.105983	AGCAGCA	ENSMUST00000096420.2|Gm14698|ENSMUSG00000071748.2|predicted gene 14698
mm10_v2_chr1_-_158958367_158958367	0.105953	AGCAGCA	ENSMUST00000159861.2|Pappa2|ENSMUSG00000073530.5|pappalysin 2
mm10_v2_chr14_+_20929416_20929451	0.105577	AGCAGCA	ENSMUST00000022369.7|Vcl|ENSMUSG00000021823.9|vinculin
mm10_v2_chr19_+_18670780_18670810	0.104275	AGCAGCA	ENSMUST00000025632.9|2410127L17Rik|ENSMUSG00000024726.9|RIKEN cDNA 2410127L17 gene
mm10_v2_chr9_+_45838572_45838592	0.104031	AGCAGCA	ENSMUST00000078111.4|Bace1|ENSMUSG00000032086.6|beta-site APP cleaving enzyme 1 	ENSMUST00000034591.4|Bace1|ENSMUSG00000032086.6|beta-site APP cleaving enzyme 1
mm10_v2_chr15_-_98871175_98871204	0.103345	AGCAGCA	ENSMUST00000178486.2|Kmt2d|ENSMUSG00000048154.10|lysine (K)-specific methyltransferase 2D 	ENSMUST00000023741.9|Kmt2d|ENSMUSG00000048154.10|lysine (K)-specific methyltransferase 2D
mm10_v2_chr5_-_143732273_143732316	0.103173	AGCAGCA	ENSMUST00000053287.5|Usp42|ENSMUSG00000051306.7|ubiquitin specific peptidase 42
mm10_v2_chr9_-_61946768_61946799	0.102992	AGCAGCA	ENSMUST00000034815.7|Kif23|ENSMUSG00000032254.9|kinesin family member 23
mm10_v2_chr4_-_149426603_149426749	0.102933	AGCAGCA	ENSMUST00000103212.3|Ube4b|ENSMUSG00000028960.12|ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)
mm10_v2_chr4_-_126533472_126533613	0.102808	AGCAGCA	ENSMUST00000084289.4|Ago4|ENSMUSG00000042500.11|argonaute RISC catalytic subunit 4
mm10_v2_chr1_+_138963709_138963808	0.102417	AGCAGCA	ENSMUST00000168527.1|Dennd1b|ENSMUSG00000056268.9|DENN/MADD domain containing 1B
mm10_v2_chr10_-_94944578_94944578	0.102203	AGCAGCA	ENSMUST00000099337.3|Plxnc1|ENSMUSG00000074785.4|plexin C1
mm10_v2_chr6_-_91411341_91411363	0.102048	AGCAGCA	ENSMUST00000032180.6|Wnt7a|ENSMUSG00000030093.6|wingless-related MMTV integration site 7A
mm10_v2_chrX_-_103981242_103981287	0.101315	AGCAGCA	ENSMUST00000121153.1|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting 	ENSMUST00000070705.4|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting
mm10_v2_chr3_+_40745430_40745459	0.101234	AGCAGCA	ENSMUST00000077083.6|Hspa4l|ENSMUSG00000025757.7|heat shock protein 4 like
mm10_v2_chr16_+_34784917_34784935	0.100969	AGCAGCA	ENSMUST00000023538.8|Mylk|ENSMUSG00000022836.10|myosin, light polypeptide kinase
mm10_v2_chr3_+_58415689_58415689	0.100398	AGCAGCA	ENSMUST00000099090.2|Tsc22d2|ENSMUSG00000027806.5|TSC22 domain family, member 2
mm10_v2_chr19_+_57361009_57361113	0.0999065	AGCAGCA	ENSMUST00000036407.4|Fam160b1|ENSMUSG00000033478.4|family with sequence similarity 160, member B1
mm10_v2_chr8_+_106059562_106059623	0.0998148	AGCAGCA	ENSMUST00000109308.1|Nfatc3|ENSMUSG00000031902.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
mm10_v2_chr15_-_3995708_3995760	0.0992208	AGCAGCA	ENSMUST00000046633.8|AW549877|ENSMUSG00000041935.9|expressed sequence AW549877
mm10_v2_chr5_-_53213447_53213473	0.0991155	AGCAGCA	ENSMUST00000031090.6|Sel1l3|ENSMUSG00000029189.6|sel-1 suppressor of lin-12-like 3 (C. elegans)
mm10_v2_chr10_+_57631981_57632060	0.0989659	AGCAGCA	ENSMUST00000095668.3|Pkib|ENSMUSG00000019876.9|protein kinase inhibitor beta, cAMP dependent, testis specific 	ENSMUST00000075992.5|Pkib|ENSMUSG00000019876.9|protein kinase inhibitor beta, cAMP dependent, testis specific
mm10_v2_chr2_+_75832168_75832194	0.0989252	AGCAGCA	ENSMUST00000047232.7|Agps|ENSMUSG00000042410.9|alkylglycerone phosphate synthase 	ENSMUST00000111952.2|Agps|ENSMUSG00000042410.9|alkylglycerone phosphate synthase
mm10_v2_chr11_+_49846732_49846758	0.0983213	AGCAGCA	ENSMUST00000178543.1|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000164643.1|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000109179.2|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000020634.7|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9
mm10_v2_chr9_-_103364970_103364996	0.0981789	AGCAGCA	ENSMUST00000116517.2|Cdv3|ENSMUSG00000032803.8|carnitine deficiency-associated gene expressed in ventricle 3
mm10_v2_chr4_+_24973419_24973419	0.0979724	AGCAGCA	ENSMUST00000038920.1|Gpr63|ENSMUSG00000040372.2|G protein-coupled receptor 63
mm10_v2_chr11_-_102556122_102556199	0.0970258	AGCAGCA	ENSMUST00000143842.1|Gpatch8|ENSMUSG00000034621.8|G patch domain containing 8
mm10_v2_chr5_+_107497718_107497759	0.0968254	AGCAGCA	ENSMUST00000112671.2|A830010M20Rik|ENSMUSG00000044060.11|RIKEN cDNA A830010M20 gene
mm10_v2_chr1_-_37541003_37541046	0.0957429	AGCAGCA	ENSMUST00000151952.1|Mgat4a|ENSMUSG00000026110.9|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm10_v2_chr6_+_140424086_140424138	0.0949976	AGCAGCA	ENSMUST00000087622.3|Plekha5|ENSMUSG00000030231.8|pleckstrin homology domain containing, family A member 5
mm10_v2_chr7_+_98494222_98494222	0.094827	AGCAGCA	ENSMUST00000165205.1|Lrrc32|ENSMUSG00000090958.1|leucine rich repeat containing 32
mm10_v2_chr6_-_51469869_51469894	0.0936552	AGCAGCA	ENSMUST00000114459.1|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1 	ENSMUST00000069949.6|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1
mm10_v2_chr6_+_67266979_67267021	0.0933533	AGCAGCA	ENSMUST00000042990.4|Serbp1|ENSMUSG00000036371.4|serpine1 mRNA binding protein 1
mm10_v2_chrX_+_101640056_101640108	0.0929183	AGCAGCA	ENSMUST00000119299.1|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) 	ENSMUST00000044475.4|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm10_v2_chr6_-_24664960_24665038	0.0926689	AGCAGCA	ENSMUST00000041737.7|Wasl|ENSMUSG00000029684.8|Wiskott-Aldrich syndrome-like (human) 	ENSMUST00000031695.8|Wasl|ENSMUSG00000029684.8|Wiskott-Aldrich syndrome-like (human)
mm10_v2_chrX_+_73342614_73342629	0.092386	AGCAGCA	ENSMUST00000114499.1|Zfp275|ENSMUSG00000031365.7|zinc finger protein 275 	ENSMUST00000033731.3|Zfp275|ENSMUSG00000031365.7|zinc finger protein 275
mm10_v2_chr14_-_98169542_98169595	0.0922374	AGCAGCA	ENSMUST00000069334.7|Dach1|ENSMUSG00000055639.10|dachshund 1 (Drosophila) 	ENSMUST00000071533.6|Dach1|ENSMUSG00000055639.10|dachshund 1 (Drosophila)
mm10_v2_chr8_+_27023793_27023810	0.092227	AGCAGCA	ENSMUST00000033873.7|Erlin2|ENSMUSG00000031483.7|ER lipid raft associated 2
mm10_v2_chr9_-_113708209_113708259	0.0921816	AGCAGCA	ENSMUST00000111861.3|Pdcd6ip|ENSMUSG00000032504.9|programmed cell death 6 interacting protein 	ENSMUST00000035086.6|Pdcd6ip|ENSMUSG00000032504.9|programmed cell death 6 interacting protein
mm10_v2_chr6_-_82774448_82774463	0.0921063	AGCAGCA	ENSMUST00000000642.4|Hk2|ENSMUSG00000000628.4|hexokinase 2
mm10_v2_chr8_-_111027752_111027791	0.0912301	AGCAGCA	ENSMUST00000040241.8|Ddx19b|ENSMUSG00000033658.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b
mm10_v2_chr8_-_8660773_8660773	0.0908496	AGCAGCA	ENSMUST00000001319.7|Efnb2|ENSMUSG00000001300.9|ephrin B2
mm10_v2_chr3_-_10440054_10440127	0.089683	AGCAGCA	ENSMUST00000099223.4|Snx16|ENSMUSG00000027534.10|sorting nexin 16 	ENSMUST00000029047.6|Snx16|ENSMUSG00000027534.10|sorting nexin 16
mm10_v2_chr13_+_75707484_75707510	0.0891775	AGCAGCA	ENSMUST00000001583.6|Ell2|ENSMUSG00000001542.6|elongation factor RNA polymerase II 2
mm10_v2_chr1_+_57377593_57377689	0.089007	AGCAGCA	ENSMUST00000042734.2|1700066M21Rik|ENSMUSG00000038323.2|RIKEN cDNA 1700066M21 gene
mm10_v2_chr19_-_14597983_14598016	0.0864037	AGCAGCA	ENSMUST00000052011.7|Tle4|ENSMUSG00000024642.10|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm10_v2_chr5_-_73256555_73256636	0.0853479	AGCAGCA	ENSMUST00000171179.1|Fryl|ENSMUSG00000090491.1|furry homolog-like (Drosophila) 	ENSMUST00000101127.5|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr6_+_125215551_125215591	0.0852132	AGCAGCA	ENSMUST00000032487.7|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1 	ENSMUST00000100942.2|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1 	ENSMUST00000063588.8|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1
mm10_v2_chr1_-_192137998_192138047	0.0847725	AGCAGCA	ENSMUST00000073279.7|Rcor3|ENSMUSG00000037395.9|REST corepressor 3 	ENSMUST00000110849.3|Rcor3|ENSMUSG00000037395.9|REST corepressor 3
mm10_v2_chr9_+_111118070_111118183	0.0847149	AGCAGCA	ENSMUST00000035078.6|Lrrfip2|ENSMUSG00000032497.9|leucine rich repeat (in FLII) interacting protein 2 	ENSMUST00000098340.2|Lrrfip2|ENSMUSG00000032497.9|leucine rich repeat (in FLII) interacting protein 2
mm10_v2_chr7_-_141434532_141434605	0.0841119	AGCAGCA	ENSMUST00000133021.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000106007.3|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000150026.1|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22 	ENSMUST00000133206.2|Slc25a22|ENSMUSG00000019082.11|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm10_v2_chrX_+_139800795_139800828	0.0833379	AGCAGCA	ENSMUST00000054889.3|Cldn2|ENSMUSG00000047230.6|claudin 2
mm10_v2_chr4_-_58912678_58912776	0.0819835	AGCAGCA	ENSMUST00000144512.1|AI314180|ENSMUSG00000050812.12|expressed sequence AI314180 	ENSMUST00000102889.3|AI314180|ENSMUSG00000050812.12|expressed sequence AI314180 	ENSMUST00000055822.8|AI314180|ENSMUSG00000050812.12|expressed sequence AI314180
mm10_v2_chrX_+_151344171_151344197	0.0817814	AGCAGCA	ENSMUST00000073364.5|Fam120c|ENSMUSG00000025262.8|family with sequence similarity 120, member C
mm10_v2_chr18_+_73573044_73573044	0.0806605	AGCAGCA	ENSMUST00000091852.4|Mex3c|ENSMUSG00000037253.8|mex3 homolog C (C. elegans)
mm10_v2_chr2_+_128967383_128967443	0.0799932	AGCAGCA	ENSMUST00000110320.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6 	ENSMUST00000110319.2|Zc3h6|ENSMUSG00000042851.11|zinc finger CCCH type containing 6
mm10_v2_chr13_-_103764502_103764505	0.0791603	AGCAGCA	ENSMUST00000074616.5|Srek1|ENSMUSG00000032621.7|splicing regulatory glutamine/lysine-rich protein 1
mm10_v2_chrX_-_38252398_38252439	0.0791045	AGCAGCA	ENSMUST00000089056.3|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A 	ENSMUST00000089054.4|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A 	ENSMUST00000066498.7|Tmem255a|ENSMUSG00000036502.8|transmembrane protein 255A
mm10_v2_chr18_+_67774876_67774915	0.078239	AGCAGCA	ENSMUST00000025421.7|Seh1l|ENSMUSG00000079614.3|SEH1-like (S. cerevisiae
mm10_v2_chr6_+_113638467_113638544	0.0777703	AGCAGCA	ENSMUST00000059286.7|Irak2|ENSMUSG00000060477.8|interleukin-1 receptor-associated kinase 2 	ENSMUST00000089023.4|Irak2|ENSMUSG00000060477.8|interleukin-1 receptor-associated kinase 2 	ENSMUST00000089022.4|Irak2|ENSMUSG00000060477.8|interleukin-1 receptor-associated kinase 2
mm10_v2_chr11_+_111066154_111066174	0.0764651	AGCAGCA	ENSMUST00000042970.2|Kcnj2|ENSMUSG00000041695.2|potassium inwardly-rectifying channel, subfamily J, member 2
mm10_v2_chr1_+_93512079_93512125	0.0761423	AGCAGCA	ENSMUST00000120301.1|Farp2|ENSMUSG00000034066.7|FERM, RhoGEF and pleckstrin domain protein 2 	ENSMUST00000041983.4|Farp2|ENSMUSG00000034066.7|FERM, RhoGEF and pleckstrin domain protein 2 	ENSMUST00000122402.1|Farp2|ENSMUSG00000034066.7|FERM, RhoGEF and pleckstrin domain protein 2
mm10_v2_chr1_-_170867761_170867784	0.075599	AGCAGCA	ENSMUST00000027974.6|Atf6|ENSMUSG00000026663.6|activating transcription factor 6
mm10_v2_chr17_-_67354459_67354485	0.0749011	AGCAGCA	ENSMUST00000037974.8|Ptprm|ENSMUSG00000033278.9|protein tyrosine phosphatase, receptor type, M
mm10_v2_chr3_+_96104498_96104571	0.072872	AGCAGCA	ENSMUST00000132980.1|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000138206.1|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000090785.2|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B 	ENSMUST00000035519.5|Otud7b|ENSMUSG00000038495.8|OTU domain containing 7B
mm10_v2_chr9_-_44881274_44881323	0.0728609	AGCAGCA	ENSMUST00000002095.3|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000114689.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A 	ENSMUST00000128768.1|Kmt2a|ENSMUSG00000002028.6|lysine (K)-specific methyltransferase 2A
mm10_v2_chr1_-_98095596_98095648	0.07218	AGCAGCA	ENSMUST00000058762.8|Pam|ENSMUSG00000026335.10|peptidylglycine alpha-amidating monooxygenase 	ENSMUST00000097625.3|Pam|ENSMUSG00000026335.10|peptidylglycine alpha-amidating monooxygenase
mm10_v2_chr1_-_193273099_193273188	0.0715575	AGCAGCA	ENSMUST00000009777.2|G0s2|ENSMUSG00000009633.2|G0/G1 switch gene 2
mm10_v2_chr18_-_38601268_38601355	0.071522	AGCAGCA	ENSMUST00000025295.6|Spry4|ENSMUSG00000024427.6|sprouty homolog 4 (Drosophila)
mm10_v2_chr10_-_118868903_118868903	0.0714645	AGCAGCA	ENSMUST00000004281.8|Dyrk2|ENSMUSG00000028630.8|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm10_v2_chr14_+_14703025_14703073	0.0701718	AGCAGCA	ENSMUST00000057015.6|Slc4a7|ENSMUSG00000021733.9|solute carrier family 4, sodium bicarbonate cotransporter, member 7
mm10_v2_chr12_-_108275409_108275417	0.0698188	AGCAGCA	ENSMUST00000136175.1|Ccdc85c|ENSMUSG00000084883.1|coiled-coil domain containing 85C
mm10_v2_chr8_-_64849818_64849861	0.0696662	AGCAGCA	ENSMUST00000034017.7|Klhl2|ENSMUSG00000031605.7|kelch-like 2, Mayven
mm10_v2_chr3_-_158036630_158036647	0.0685939	AGCAGCA	ENSMUST00000121326.1|Srsf11|ENSMUSG00000055436.12|serine/arginine-rich splicing factor 11
mm10_v2_chr18_+_44380479_44380554	0.0685588	AGCAGCA	ENSMUST00000025350.8|Dcp2|ENSMUSG00000024472.8|DCP2 decapping enzyme homolog (S. cerevisiae)
mm10_v2_chr9_+_51765325_51765364	0.0685567	AGCAGCA	ENSMUST00000065496.5|Arhgap20|ENSMUSG00000053199.7|Rho GTPase activating protein 20
mm10_v2_chr1_-_106714217_106714330	0.0680842	AGCAGCA	ENSMUST00000112751.1|Bcl2|ENSMUSG00000057329.6|B cell leukemia/lymphoma 2
mm10_v2_chr19_-_60581013_60581025	0.0679729	AGCAGCA	ENSMUST00000111460.3|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1 	ENSMUST00000081790.7|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1 	ENSMUST00000166712.1|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1
mm10_v2_chr19_-_3575708_3575756	0.067431	AGCAGCA	ENSMUST00000113997.2|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000025846.8|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000172362.1|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3
mm10_v2_chr11_-_97115327_97115332	0.0667454	AGCAGCA	ENSMUST00000001484.2|Tbx21|ENSMUSG00000001444.2|T-box 21
mm10_v2_chr8_+_25518757_25518772	0.066716	AGCAGCA	ENSMUST00000178276.1|Fgfr1|ENSMUSG00000031565.11|fibroblast growth factor receptor 1 	ENSMUST00000179592.1|Fgfr1|ENSMUSG00000031565.11|fibroblast growth factor receptor 1
mm10_v2_chrX_-_164258186_164258199	0.0666366	AGCAGCA	ENSMUST00000112265.2|Bmx|ENSMUSG00000031377.5|BMX non-receptor tyrosine kinase
mm10_v2_chr5_-_140830430_140830453	0.066174	AGCAGCA	ENSMUST00000000153.4|Gna12|ENSMUSG00000000149.6|guanine nucleotide binding protein, alpha 12
mm10_v2_chr11_+_73047783_73047902	0.0660501	AGCAGCA	ENSMUST00000021135.3|1200014J11Rik|ENSMUSG00000020783.8|RIKEN cDNA 1200014J11 gene
mm10_v2_chr14_+_54883377_54883507	0.0660339	AGCAGCA	ENSMUST00000022806.3|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000134077.1|Gm20521|ENSMUSG00000092232.1|predicted gene 20521 	ENSMUST00000172844.1|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000133397.2|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2
mm10_v2_chr12_-_91590009_91590056	0.0654196	AGCAGCA	ENSMUST00000021345.6|Gtf2a1|ENSMUSG00000020962.7|general transcription factor II A, 1
mm10_v2_chr6_-_52208694_52208722	0.0651704	AGCAGCA	ENSMUST00000062829.7|Hoxa6|ENSMUSG00000043219.8|homeobox A6
mm10_v2_chr5_+_91987471_91987479	0.064396	AGCAGCA	ENSMUST00000178614.1|Gm1045|ENSMUSG00000096035.1|predicted gene 1045
mm10_v2_chr4_-_123342803_123342918	0.0642741	AGCAGCA	ENSMUST00000102641.3|Bmp8a|ENSMUSG00000032726.6|bone morphogenetic protein 8a
mm10_v2_chr13_+_37826225_37826315	0.0640581	AGCAGCA	ENSMUST00000128570.1|Rreb1|ENSMUSG00000039087.10|ras responsive element binding protein 1
mm10_v2_chr4_+_17853451_17853474	0.063717	AGCAGCA	ENSMUST00000029881.3|Mmp16|ENSMUSG00000028226.9|matrix metallopeptidase 16
mm10_v2_chr7_+_120677579_120677630	0.0636249	AGCAGCA	ENSMUST00000060175.6|BC030336|ENSMUSG00000046096.6|cDNA sequence BC030336
mm10_v2_chr12_-_31634592_31634677	0.0633066	AGCAGCA	ENSMUST00000020979.7|Bcap29|ENSMUSG00000020650.8|B cell receptor associated protein 29 	ENSMUST00000177962.1|Bcap29|ENSMUSG00000020650.8|B cell receptor associated protein 29
mm10_v2_chr11_-_4848985_4849194	0.0631336	AGCAGCA	ENSMUST00000056290.6|Nf2|ENSMUSG00000009073.10|neurofibromatosis 2 	ENSMUST00000172305.1|Nf2|ENSMUSG00000009073.10|neurofibromatosis 2 	ENSMUST00000164190.1|Nf2|ENSMUSG00000009073.10|neurofibromatosis 2
mm10_v2_chr14_+_75845296_75845307	0.0630543	AGCAGCA	ENSMUST00000142061.1|Tpt1|ENSMUSG00000060126.8|tumor protein, translationally-controlled 1
mm10_v2_chr14_-_64949838_64949886	0.0627966	AGCAGCA	ENSMUST00000067843.3|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176489.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175905.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000022544.7|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175744.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176128.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1
mm10_v2_chr7_+_75455534_75455629	0.0622838	AGCAGCA	ENSMUST00000147005.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13 	ENSMUST00000166315.1|Akap13|ENSMUSG00000066406.8|A kinase (PRKA) anchor protein 13
mm10_v2_chr4_-_141538434_141538525	0.060937	AGCAGCA	ENSMUST00000078886.3|Spen|ENSMUSG00000040761.10|SPEN homolog, transcriptional regulator (Drosophila)
mm10_v2_chr10_+_105841064_105841132	0.0598102	AGCAGCA	ENSMUST00000020049.8|Ccdc59|ENSMUSG00000019897.8|coiled-coil domain containing 59
mm10_v2_chr3_+_51415986_51416044	0.0597395	AGCAGCA	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chr1_+_130717320_130717333	0.0592912	AGCAGCA	ENSMUST00000049813.4|Yod1|ENSMUSG00000046404.4|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)
mm10_v2_chrX_+_75514299_75514316	0.0592903	AGCAGCA	ENSMUST00000114070.3|Vbp1|ENSMUSG00000031197.5|von Hippel-Lindau binding protein 1 	ENSMUST00000033540.5|Vbp1|ENSMUSG00000031197.5|von Hippel-Lindau binding protein 1
mm10_v2_chr7_-_16614937_16615021	0.0588242	AGCAGCA	ENSMUST00000171937.1|Grlf1|ENSMUSG00000058230.6|glucocorticoid receptor DNA binding factor 1 	ENSMUST00000075845.4|Grlf1|ENSMUSG00000058230.6|glucocorticoid receptor DNA binding factor 1
mm10_v2_chr3_+_94954075_94954226	0.0581627	AGCAGCA	ENSMUST00000107260.2|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000142311.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000137088.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000152869.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000107254.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000107253.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression)
mm10_v2_chr16_+_35983307_35983395	0.05816	AGCAGCA	ENSMUST00000004054.6|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr8_-_77724426_77724483	0.0574595	AGCAGCA	ENSMUST00000034029.7|Ednra|ENSMUSG00000031616.7|endothelin receptor type A
mm10_v2_chr10_+_106470281_106470367	0.0572469	AGCAGCA	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr9_+_108808356_108808441	0.0571262	AGCAGCA	ENSMUST00000035218.7|Nckipsd|ENSMUSG00000032598.7|NCK interacting protein with SH3 domain
mm10_v2_chr1_-_17097839_17097889	0.0568322	AGCAGCA	ENSMUST00000038382.4|Jph1|ENSMUSG00000042686.4|junctophilin 1
mm10_v2_chr12_-_84970814_84970900	0.056282	AGCAGCA	ENSMUST00000165886.1|Arel1|ENSMUSG00000042350.7|apoptosis resistant E3 ubiquitin protein ligase 1 	ENSMUST00000167448.1|Arel1|ENSMUSG00000042350.7|apoptosis resistant E3 ubiquitin protein ligase 1 	ENSMUST00000043169.7|Arel1|ENSMUSG00000042350.7|apoptosis resistant E3 ubiquitin protein ligase 1
mm10_v2_chr17_-_25015230_25015230	0.0552485	AGCAGCA	ENSMUST00000073337.6|Cramp1l|ENSMUSG00000038002.8|Crm, cramped-like (Drosophila)
mm10_v2_chr9_-_65827544_65827576	0.0551742	AGCAGCA	ENSMUST00000159109.1|Zfp609|ENSMUSG00000040524.9|zinc finger protein 609
mm10_v2_chr6_-_38876163_38876234	0.054733	AGCAGCA	ENSMUST00000161779.1|Hipk2|ENSMUSG00000061436.9|homeodomain interacting protein kinase 2
mm10_v2_chrX_-_111697069_111697127	0.0531424	AGCAGCA	ENSMUST00000113422.2|Hdx|ENSMUSG00000034551.6|highly divergent homeobox 	ENSMUST00000038472.5|Hdx|ENSMUSG00000034551.6|highly divergent homeobox
mm10_v2_chr11_-_115297510_115297519	0.0531342	AGCAGCA	ENSMUST00000056153.7|Fads6|ENSMUSG00000044788.10|fatty acid desaturase domain family, member 6
mm10_v2_chr2_-_156111954_156111978	0.0529314	AGCAGCA	ENSMUST00000059647.5|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000109604.2|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000142960.2|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000138068.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12 	ENSMUST00000136296.2|Cpne1|ENSMUSG00000074643.6|copine I 	ENSMUST00000128499.1|Rbm12|ENSMUSG00000089824.4|RNA binding motif protein 12
mm10_v2_chr14_+_75016027_75016045	0.0521592	AGCAGCA	ENSMUST00000036072.7|5031414D18Rik|ENSMUSG00000034959.7|RIKEN cDNA 5031414D18 gene
mm10_v2_chr11_+_74649462_74649520	0.0521299	AGCAGCA	ENSMUST00000092915.5|Cluh|ENSMUSG00000020741.11|clustered mitochondria (cluA/CLU1) homolog 	ENSMUST00000117818.1|Cluh|ENSMUSG00000020741.11|clustered mitochondria (cluA/CLU1) homolog
mm10_v2_chr18_-_21300129_21300168	0.0511916	AGCAGCA	ENSMUST00000049260.6|Garem|ENSMUSG00000042680.7|GRB2 associated, regulator of MAPK1
mm10_v2_chr10_-_127263346_127263368	0.0510541	AGCAGCA	ENSMUST00000099172.3|Kif5a|ENSMUSG00000074657.4|kinesin family member 5A
mm10_v2_chr3_+_28263205_28263215	0.0509759	AGCAGCA	ENSMUST00000159236.2|Tnik|ENSMUSG00000027692.10|TRAF2 and NCK interacting kinase
mm10_v2_chr12_+_111166349_111166397	0.0499217	AGCAGCA	ENSMUST00000117269.1|Traf3|ENSMUSG00000021277.10|TNF receptor-associated factor 3
mm10_v2_chr16_-_44139196_44139305	0.0489128	AGCAGCA	ENSMUST00000063661.6|Atp6v1a|ENSMUSG00000052459.7|ATPase, H+ transporting, lysosomal V1 subunit A 	ENSMUST00000114666.2|Atp6v1a|ENSMUSG00000052459.7|ATPase, H+ transporting, lysosomal V1 subunit A
mm10_v2_chr5_+_117976761_117976803	0.0482533	AGCAGCA	ENSMUST00000035579.6|Fbxo21|ENSMUSG00000032898.6|F-box protein 21
mm10_v2_chr4_+_126556935_126556957	0.0480385	AGCAGCA	ENSMUST00000048391.8|Clspn|ENSMUSG00000042489.9|claspin
mm10_v2_chr17_+_55986494_55986531	0.0471818	AGCAGCA	ENSMUST00000011733.8|Fsd1|ENSMUSG00000011589.8|fibronectin type 3 and SPRY domain-containing protein
mm10_v2_chr4_-_56947411_56947447	0.0464712	AGCAGCA	ENSMUST00000107609.3|Tmem245|ENSMUSG00000055296.8|transmembrane protein 245 	ENSMUST00000068792.6|Tmem245|ENSMUSG00000055296.8|transmembrane protein 245
mm10_v2_chr9_-_79718518_79718592	0.0461928	AGCAGCA	ENSMUST00000071750.6|Col12a1|ENSMUSG00000032332.11|collagen, type XII, alpha 1
mm10_v2_chr11_-_116199040_116199090	0.045055	AGCAGCA	ENSMUST00000066587.5|Acox1|ENSMUSG00000020777.10|acyl-Coenzyme A oxidase 1, palmitoyl
mm10_v2_chr8_-_85555261_85555315	0.0447288	AGCAGCA	ENSMUST00000034138.5|Dnaja2|ENSMUSG00000031701.5|DnaJ (Hsp40) homolog, subfamily A, member 2
mm10_v2_chrX_-_152342419_152342430	0.0446697	AGCAGCA	ENSMUST00000044509.6|Tspyl2|ENSMUSG00000041096.7|TSPY-like 2
mm10_v2_chrX_-_102644210_102644254	0.0442262	AGCAGCA	ENSMUST00000052012.7|Phka1|ENSMUSG00000034055.10|phosphorylase kinase alpha 1 	ENSMUST00000043596.5|Phka1|ENSMUSG00000034055.10|phosphorylase kinase alpha 1 	ENSMUST00000119229.1|Phka1|ENSMUSG00000034055.10|phosphorylase kinase alpha 1 	ENSMUST00000122022.1|Phka1|ENSMUSG00000034055.10|phosphorylase kinase alpha 1 	ENSMUST00000120270.1|Phka1|ENSMUSG00000034055.10|phosphorylase kinase alpha 1 	ENSMUST00000113611.2|Phka1|ENSMUSG00000034055.10|phosphorylase kinase alpha 1
mm10_v2_chr3_-_127409044_127409064	0.0441909	AGCAGCA	ENSMUST00000182704.1|Ank2|ENSMUSG00000032826.10|ankyrin 2, brain
mm10_v2_chr4_-_9643638_9643717	0.0441182	AGCAGCA	ENSMUST00000108333.1|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000108334.1|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000108335.1|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000152526.1|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase 	ENSMUST00000103004.3|Asph|ENSMUSG00000028207.12|aspartate-beta-hydroxylase
mm10_v2_chr8_-_64205970_64206011	0.0436257	AGCAGCA	ENSMUST00000066166.4|Tll1|ENSMUSG00000053626.4|tolloid-like
mm10_v2_chr11_-_121388186_121388267	0.0427081	AGCAGCA	ENSMUST00000106107.2|Rab40b|ENSMUSG00000025170.7|Rab40b, member RAS oncogene family
mm10_v2_chr6_-_83441674_83441684	0.0420294	AGCAGCA	ENSMUST00000089622.4|Tet3|ENSMUSG00000034832.9|tet methylcytosine dioxygenase 3
mm10_v2_chrX_-_163958590_163958598	0.0419751	AGCAGCA	ENSMUST00000090840.3|Zrsr2|ENSMUSG00000031370.6|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2
mm10_v2_chr12_-_3309912_3309975	0.0418524	AGCAGCA	ENSMUST00000021001.8|Rab10|ENSMUSG00000020671.8|RAB10, member RAS oncogene family
mm10_v2_chr1_-_172082757_172082795	0.0411146	AGCAGCA	ENSMUST00000003550.4|Ncstn|ENSMUSG00000003458.6|nicastrin
mm10_v2_chr7_-_132599637_132599637	0.0394264	AGCAGCA	ENSMUST00000054562.3|Nkx1-2|ENSMUSG00000048528.7|NK1 transcription factor related, locus 2 (Drosophila)
mm10_v2_chr18_+_75367529_75367561	0.0392691	AGCAGCA	ENSMUST00000026999.3|Smad7|ENSMUSG00000025880.5|SMAD family member 7
mm10_v2_chrX_-_142966709_142966734	0.0389205	AGCAGCA	ENSMUST00000041317.2|Ammecr1|ENSMUSG00000042225.3|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
mm10_v2_chr9_+_65398488_65398580	0.0388586	AGCAGCA	ENSMUST00000165682.1|Rasl12|ENSMUSG00000041696.7|RAS-like, family 12 	ENSMUST00000085453.4|Rasl12|ENSMUSG00000041696.7|RAS-like, family 12
mm10_v2_chr10_+_128092771_128092819	0.0377347	AGCAGCA	ENSMUST00000170054.2|Baz2a|ENSMUSG00000040054.9|bromodomain adjacent to zinc finger domain, 2A 	ENSMUST00000045621.8|Baz2a|ENSMUSG00000040054.9|bromodomain adjacent to zinc finger domain, 2A
mm10_v2_chr11_+_80477015_80477085	0.0375851	AGCAGCA	ENSMUST00000053413.10|Cdk5r1|ENSMUSG00000048895.12|cyclin-dependent kinase 5, regulatory subunit 1 (p35) 	ENSMUST00000147694.1|Cdk5r1|ENSMUSG00000048895.12|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
mm10_v2_chr9_+_43744399_43744576	0.0371163	AGCAGCA	ENSMUST00000034510.7|Pvrl1|ENSMUSG00000032012.7|poliovirus receptor-related 1
mm10_v2_chrX_+_99975570_99975781	0.0361061	AGCAGCA	ENSMUST00000113779.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113776.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113775.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113780.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113778.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113781.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113783.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000071453.2|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113777.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A
mm10_v2_chr4_+_14864076_14864150	0.0350848	AGCAGCA	ENSMUST00000029875.3|Tmem55a|ENSMUSG00000028221.3|transmembrane protein 55A
mm10_v2_chr11_-_85235065_85235137	0.0344962	AGCAGCA	ENSMUST00000018625.9|Appbp2|ENSMUSG00000018481.9|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm10_v2_chr1_+_127774164_127774238	0.0343179	AGCAGCA	ENSMUST00000027587.8|Ccnt2|ENSMUSG00000026349.8|cyclin T2 	ENSMUST00000112570.1|Ccnt2|ENSMUSG00000026349.8|cyclin T2
mm10_v2_chr8_-_106136890_106136974	0.0342602	AGCAGCA	ENSMUST00000115979.2|Esrp2|ENSMUSG00000084128.4|epithelial splicing regulatory protein 2
mm10_v2_chr18_+_34542313_34542313	0.0341545	AGCAGCA	ENSMUST00000012426.2|Wnt8a|ENSMUSG00000012282.2|wingless-related MMTV integration site 8A
mm10_v2_chr4_+_43875524_43875558	0.0340636	AGCAGCA	ENSMUST00000030198.6|Reck|ENSMUSG00000028476.7|reversion-inducing-cysteine-rich protein with kazal motifs
mm10_v2_chr8_-_86745950_86746054	0.0330431	AGCAGCA	ENSMUST00000045296.4|Siah1a|ENSMUSG00000036840.4|seven in absentia 1A
mm10_v2_chr1_+_9798123_9798216	0.0325475	AGCAGCA	ENSMUST00000168907.1|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3 	ENSMUST00000166384.1|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3
mm10_v2_chr10_+_13090788_13090843	0.0306701	AGCAGCA	ENSMUST00000121646.1|Plagl1|ENSMUSG00000019817.12|pleiomorphic adenoma gene-like 1 	ENSMUST00000121325.1|Plagl1|ENSMUSG00000019817.12|pleiomorphic adenoma gene-like 1 	ENSMUST00000121766.1|Plagl1|ENSMUSG00000019817.12|pleiomorphic adenoma gene-like 1
mm10_v2_chr9_-_59486610_59486621	0.0303145	AGCAGCA	ENSMUST00000171975.1|Arih1|ENSMUSG00000025234.5|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
mm10_v2_chr5_-_32827109_32827109	0.0299694	AGCAGCA	ENSMUST00000144673.2|Gm20671|ENSMUSG00000093574.1|predicted gene 20671
mm10_v2_chr19_+_25236959_25236982	0.029424	AGCAGCA	ENSMUST00000049400.8|Kank1|ENSMUSG00000032702.10|KN motif and ankyrin repeat domains 1
mm10_v2_chr6_+_5725639_5725801	0.0288305	AGCAGCA	ENSMUST00000115556.1|Dync1i1|ENSMUSG00000029757.10|dynein cytoplasmic 1 intermediate chain 1 	ENSMUST00000115555.1|Dync1i1|ENSMUSG00000029757.10|dynein cytoplasmic 1 intermediate chain 1 	ENSMUST00000115559.3|Dync1i1|ENSMUSG00000029757.10|dynein cytoplasmic 1 intermediate chain 1
mm10_v2_chr1_-_84284548_84284645	0.0287472	AGCAGCA	ENSMUST00000177458.1|Pid1|ENSMUSG00000045658.10|phosphotyrosine interaction domain containing 1 	ENSMUST00000168574.2|Pid1|ENSMUSG00000045658.10|phosphotyrosine interaction domain containing 1
mm10_v2_chr7_-_121707253_121707460	0.0284983	AGCAGCA	ENSMUST00000046929.6|Usp31|ENSMUSG00000063317.6|ubiquitin specific peptidase 31
mm10_v2_chr2_-_132029845_132030001	0.0284477	AGCAGCA	ENSMUST00000028814.8|Rassf2|ENSMUSG00000027339.9|Ras association (RalGDS/AF-6) domain family member 2
mm10_v2_chr12_+_57230406_57230460	0.0282211	AGCAGCA	ENSMUST00000139049.1|Prps1l3|ENSMUSG00000079104.4|phosphoribosyl pyrophosphate synthetase 1-like 3 	ENSMUST00000145003.1|Mipol1|ENSMUSG00000047022.12|mirror-image polydactyly gene 1 homolog (human) 	ENSMUST00000123498.1|Mipol1|ENSMUSG00000047022.12|mirror-image polydactyly gene 1 homolog (human)
mm10_v2_chr1_-_152090308_152090332	0.0280661	AGCAGCA	ENSMUST00000044581.7|1700025G04Rik|ENSMUSG00000032666.10|RIKEN cDNA 1700025G04 gene
mm10_v2_chr18_+_58659443_58659522	0.0280603	AGCAGCA	ENSMUST00000025503.8|Isoc1|ENSMUSG00000024601.8|isochorismatase domain containing 1
mm10_v2_chr9_+_35421541_35421616	0.0273227	AGCAGCA	ENSMUST00000119129.2|Cdon|ENSMUSG00000038119.8|cell adhesion molecule-related/down-regulated by oncogenes
mm10_v2_chr7_-_89338709_89338795	0.0272795	AGCAGCA	ENSMUST00000137723.1|Tmem135|ENSMUSG00000039428.4|transmembrane protein 135 	ENSMUST00000117852.1|Tmem135|ENSMUSG00000039428.4|transmembrane protein 135 	ENSMUST00000041968.3|Tmem135|ENSMUSG00000039428.4|transmembrane protein 135
mm10_v2_chr19_-_12501996_12502152	0.0270371	AGCAGCA	ENSMUST00000045521.7|Dtx4|ENSMUSG00000039982.7|deltex 4 homolog (Drosophila)
mm10_v2_chr11_+_70700473_70700576	0.0268604	AGCAGCA	ENSMUST00000152618.2|Kif1c|ENSMUSG00000020821.11|kinesin family member 1C 	ENSMUST00000102554.1|Kif1c|ENSMUSG00000020821.11|kinesin family member 1C 	ENSMUST00000094499.4|Kif1c|ENSMUSG00000020821.11|kinesin family member 1C 	ENSMUST00000072187.5|Kif1c|ENSMUSG00000020821.11|kinesin family member 1C
mm10_v2_chr12_-_101819048_101819061	0.0267144	AGCAGCA	ENSMUST00000021603.8|Fbln5|ENSMUSG00000021186.8|fibulin 5
mm10_v2_chr6_+_17636983_17637014	0.0261449	AGCAGCA	ENSMUST00000015877.7|Capza2|ENSMUSG00000015733.7|capping protein (actin filament) muscle Z-line, alpha 2
mm10_v2_chr4_+_120854786_120854843	0.0257662	AGCAGCA	ENSMUST00000071093.2|Rims3|ENSMUSG00000032890.11|regulating synaptic membrane exocytosis 3
mm10_v2_chr5_-_93045022_93045064	0.0253379	AGCAGCA	ENSMUST00000061328.5|Sowahb|ENSMUSG00000045314.5|sosondowah ankyrin repeat domain family member B
mm10_v2_chr6_+_92091378_92091390	0.025073	AGCAGCA	ENSMUST00000113460.1|Nr2c2|ENSMUSG00000005893.8|nuclear receptor subfamily 2, group C, member 2
mm10_v2_chr5_+_150952607_150952714	0.0248455	AGCAGCA	ENSMUST00000078856.6|Kl|ENSMUSG00000058488.6|klotho
mm10_v2_chr17_+_78200240_78200258	0.0242821	AGCAGCA	ENSMUST00000112498.2|Crim1|ENSMUSG00000024074.7|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm10_v2_chr2_-_66256576_66256645	0.0239339	AGCAGCA	ENSMUST00000125446.2|Ttc21b|ENSMUSG00000034848.11|tetratricopeptide repeat domain 21B 	ENSMUST00000102718.3|Ttc21b|ENSMUSG00000034848.11|tetratricopeptide repeat domain 21B
mm10_v2_chr15_-_77956658_77956723	0.0238369	AGCAGCA	ENSMUST00000117725.1|Foxred2|ENSMUSG00000016552.7|FAD-dependent oxidoreductase domain containing 2 	ENSMUST00000016696.6|Foxred2|ENSMUSG00000016552.7|FAD-dependent oxidoreductase domain containing 2
mm10_v2_chr9_+_109931458_109931488	0.0237738	AGCAGCA	ENSMUST00000072772.5|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4 	ENSMUST00000035055.8|Map4|ENSMUSG00000032479.9|microtubule-associated protein 4
mm10_v2_chr9_+_47530173_47530373	0.0236851	AGCAGCA	ENSMUST00000114548.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000152459.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000143026.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000085909.2|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000114547.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000034581.3|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1
mm10_v2_chr9_+_102506072_102506138	0.022594	AGCAGCA	ENSMUST00000039390.4|Ky|ENSMUSG00000035606.7|kyphoscoliosis peptidase
mm10_v2_chr14_-_54913089_54913132	0.022371	AGCAGCA	ENSMUST00000050772.7|Slc22a17|ENSMUSG00000022199.10|solute carrier family 22 (organic cation transporter), member 17
mm10_v2_chr10_+_110745433_110745572	0.0222854	AGCAGCA	ENSMUST00000174857.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000073781.5|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000173471.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7 	ENSMUST00000173634.1|E2f7|ENSMUSG00000020185.10|E2F transcription factor 7
mm10_v2_chr1_-_134955908_134955955	0.0203783	AGCAGCA	ENSMUST00000045665.6|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000086444.4|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B 	ENSMUST00000112163.1|Ppp1r12b|ENSMUSG00000073557.5|protein phosphatase 1, regulatory (inhibitor) subunit 12B
mm10_v2_chr15_-_31367527_31367759	0.0195017	AGCAGCA	ENSMUST00000076942.4|Ankrd33b|ENSMUSG00000022237.10|ankyrin repeat domain 33B 	ENSMUST00000123325.1|Ankrd33b|ENSMUSG00000022237.10|ankyrin repeat domain 33B 	ENSMUST00000110410.2|Ankrd33b|ENSMUSG00000022237.10|ankyrin repeat domain 33B
mm10_v2_chr4_-_40853950_40854021	0.0194964	AGCAGCA	ENSMUST00000030121.6|B4galt1|ENSMUSG00000028413.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 	ENSMUST00000108096.2|B4galt1|ENSMUSG00000028413.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
mm10_v2_chr7_+_82335732_82335732	0.0176264	AGCAGCA	ENSMUST00000173287.1|Adamtsl3|ENSMUSG00000070469.5|ADAMTS-like 3
mm10_v2_chr15_+_102073773_102073903	0.0164341	AGCAGCA	ENSMUST00000169681.1|Eif4b|ENSMUSG00000058655.8|eukaryotic translation initiation factor 4B
mm10_v2_chr1_-_14310198_14310218	0.0162835	AGCAGCA	ENSMUST00000168081.2|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila) 	ENSMUST00000027066.6|Eya1|ENSMUSG00000025932.8|eyes absent 1 homolog (Drosophila)
mm10_v2_chr11_+_107547925_107547968	0.0161673	AGCAGCA	ENSMUST00000100305.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain 	ENSMUST00000075012.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain 	ENSMUST00000106746.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain
mm10_v2_chr11_-_70255329_70255353	0.0159057	AGCAGCA	ENSMUST00000108574.2|Alox12|ENSMUSG00000000320.4|arachidonate 12-lipoxygenase 	ENSMUST00000000329.2|Alox12|ENSMUSG00000000320.4|arachidonate 12-lipoxygenase
mm10_v2_chr11_+_83964419_83964478	0.0158978	AGCAGCA	ENSMUST00000049714.8|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000092834.5|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000183714.1|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000183456.1|Synrg|ENSMUSG00000034940.9|synergin, gamma
mm10_v2_chr11_+_83473079_83473123	0.0154261	AGCAGCA	ENSMUST00000021018.4|Taf15|ENSMUSG00000020680.9|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr18_-_37969742_37969782	0.0153859	AGCAGCA	ENSMUST00000166148.1|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1 	ENSMUST00000163131.1|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1 	ENSMUST00000043437.7|Fchsd1|ENSMUSG00000038524.7|FCH and double SH3 domains 1
mm10_v2_chr9_-_70141484_70141578	0.0147127	AGCAGCA	ENSMUST00000034749.8|Fam81a|ENSMUSG00000032224.8|family with sequence similarity 81, member A
mm10_v2_chr2_-_103797617_103797662	0.0143159	AGCAGCA	ENSMUST00000028607.6|Caprin1|ENSMUSG00000027184.8|cell cycle associated protein 1
mm10_v2_chr15_+_12205009_12205040	0.0141455	AGCAGCA	ENSMUST00000038172.8|Mtmr12|ENSMUSG00000039458.8|myotubularin related protein 12
mm10_v2_chr5_+_34369909_34369970	0.0136668	AGCAGCA	ENSMUST00000180376.1|Fam193a|ENSMUSG00000037210.10|family with sequence similarity 193, member A
mm10_v2_chr8_+_46471041_46471078	0.0116349	AGCAGCA	ENSMUST00000034046.5|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1
mm10_v2_chr12_+_110485710_110485755	0.011346	AGCAGCA	ENSMUST00000084985.3|Ppp2r5c|ENSMUSG00000017843.7|protein phosphatase 2, regulatory subunit B (B56), gamma isoform 	ENSMUST00000109832.1|Ppp2r5c|ENSMUSG00000017843.7|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm10_v2_chr3_+_114904062_114904142	0.0091853	AGCAGCA	ENSMUST00000081752.6|Olfm3|ENSMUSG00000027965.9|olfactomedin 3
mm10_v2_chr5_+_137518880_137518880	0.00912603	AGCAGCA	ENSMUST00000031727.7|Gigyf1|ENSMUSG00000029714.7|GRB10 interacting GYF protein 1
mm10_v2_chr18_-_62179948_62179986	0.00827182	AGCAGCA	ENSMUST00000053640.3|Adrb2|ENSMUSG00000045730.3|adrenergic receptor, beta 2
mm10_v2_chr2_-_27426992_27427061	0.0079467	AGCAGCA	ENSMUST00000056176.7|Vav2|ENSMUSG00000009621.12|vav 2 oncogene
mm10_v2_chr2_-_136387929_136387985	0.00778801	AGCAGCA	ENSMUST00000035264.2|Pak7|ENSMUSG00000039913.6|p21 protein (Cdc42/Rac)-activated kinase 7 	ENSMUST00000077200.3|Pak7|ENSMUSG00000039913.6|p21 protein (Cdc42/Rac)-activated kinase 7
mm10_v2_chr10_+_70097102_70097211	0.00770277	AGCAGCA	ENSMUST00000147545.1|Ccdc6|ENSMUSG00000048701.7|coiled-coil domain containing 6
mm10_v2_chr14_+_116925291_116925362	0.00738642	AGCAGCA	ENSMUST00000078849.4|Gpc6|ENSMUSG00000058571.4|glypican 6
mm10_v2_chr19_-_4943049_4943127	0.00728608	AGCAGCA	ENSMUST00000133254.1|Peli3|ENSMUSG00000024901.8|pellino 3 	ENSMUST00000120475.1|Peli3|ENSMUSG00000024901.8|pellino 3 	ENSMUST00000025834.7|Peli3|ENSMUSG00000024901.8|pellino 3
mm10_v2_chr1_+_105990384_105990498	0.0064717	AGCAGCA	ENSMUST00000119166.1|Zcchc2|ENSMUSG00000038866.9|zinc finger, CCHC domain containing 2
mm10_v2_chr2_+_121140407_121140461	0.00646764	AGCAGCA	ENSMUST00000028702.3|Adal|ENSMUSG00000027259.9|adenosine deaminase-like 	ENSMUST00000110665.1|Adal|ENSMUSG00000027259.9|adenosine deaminase-like
mm10_v2_chr10_-_25200110_25200178	0.00566582	AGCAGCA	ENSMUST00000100012.2|Akap7|ENSMUSG00000039166.9|A kinase (PRKA) anchor protein 7
mm10_v2_chr18_-_37935429_37935476	0.00496112	AGCAGCA	ENSMUST00000115634.1|Diap1|ENSMUSG00000024456.10|diaphanous homolog 1 (Drosophila)
mm10_v2_chr4_+_137277489_137277518	0.00470484	AGCAGCA	ENSMUST00000045747.4|Wnt4|ENSMUSG00000036856.4|wingless-related MMTV integration site 4
mm10_v2_chr14_-_57746044_57746144	0.0039989	AGCAGCA	ENSMUST00000173990.1|Lats2|ENSMUSG00000021959.9|large tumor suppressor 2 	ENSMUST00000022531.7|Lats2|ENSMUSG00000021959.9|large tumor suppressor 2
mm10_v2_chr17_+_30901811_30901867	0.0036864	AGCAGCA	ENSMUST00000114574.1|Glp1r|ENSMUSG00000024027.7|glucagon-like peptide 1 receptor
mm10_v2_chr9_+_108490676_108490692	0.00363544	AGCAGCA	ENSMUST00000178075.1|Usp19|ENSMUSG00000006676.10|ubiquitin specific peptidase 19 	ENSMUST00000085044.7|Usp19|ENSMUSG00000006676.10|ubiquitin specific peptidase 19 	ENSMUST00000166103.2|Usp19|ENSMUSG00000006676.10|ubiquitin specific peptidase 19 	ENSMUST00000006854.7|Usp19|ENSMUSG00000006676.10|ubiquitin specific peptidase 19
mm10_v2_chr16_+_17451981_17452034	0.00324558	AGCAGCA	ENSMUST00000006293.3|Crkl|ENSMUSG00000006134.3|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
mm10_v2_chr4_+_45342063_45342134	0.00312665	AGCAGCA	ENSMUST00000155551.1|Dcaf10|ENSMUSG00000035572.10|DDB1 and CUL4 associated factor 10
mm10_v2_chr6_-_121003099_121003153	0.00280723	AGCAGCA	ENSMUST00000098457.2|Mical3|ENSMUSG00000051586.8|microtubule associated monooxygenase, calponin and LIM domain containing 3 	ENSMUST00000150503.1|Mical3|ENSMUSG00000051586.8|microtubule associated monooxygenase, calponin and LIM domain containing 3
mm10_v2_chrX_-_158043266_158043294	0.0022414	AGCAGCA	ENSMUST00000026750.8|Cnksr2|ENSMUSG00000025658.10|connector enhancer of kinase suppressor of Ras 2 	ENSMUST00000112513.1|Cnksr2|ENSMUSG00000025658.10|connector enhancer of kinase suppressor of Ras 2
mm10_v2_chr14_+_30479565_30479685	0.00179133	AGCAGCA	ENSMUST00000022535.7|Dcp1a|ENSMUSG00000021962.8|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm10_v2_chr17_-_28486082_28486149	0.000484452	AGCAGCA	ENSMUST00000079413.3|Fkbp5|ENSMUSG00000024222.10|FK506 binding protein 5
