mm10_v2_chr3_-_84479418_84479491	1.46161	ACUGGCC	ENSMUST00000091002.1|Fhdc1|ENSMUSG00000041842.9|FH2 domain containing 1
mm10_v2_chr10_-_128401218_128401234	1.31421	ACUGGCC	ENSMUST00000042666.5|Slc39a5|ENSMUSG00000039878.6|solute carrier family 39 (metal ion transporter), member 5
mm10_v2_chr18_+_36528145_36528157	1.10712	ACUGGCC	ENSMUST00000074298.6|Slc4a9|ENSMUSG00000024485.9|solute carrier family 4, sodium bicarbonate cotransporter, member 9 	ENSMUST00000115694.2|Slc4a9|ENSMUSG00000024485.9|solute carrier family 4, sodium bicarbonate cotransporter, member 9
mm10_v2_chr4_+_13743424_13743478	0.729528	ACUGGCC	ENSMUST00000006761.3|Runx1t1|ENSMUSG00000006586.9|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm10_v2_chr4_-_3938354_3938401	0.546272	ACUGGCC	ENSMUST00000003369.3|Plag1|ENSMUSG00000003282.3|pleiomorphic adenoma gene 1
mm10_v2_chr11_-_96005872_96005952	0.454007	ACUGGCC	ENSMUST00000013559.2|Igf2bp1|ENSMUSG00000013415.3|insulin-like growth factor 2 mRNA binding protein 1
mm10_v2_chrX_+_9885622_9885622	0.390978	ACUGGCC	ENSMUST00000067529.2|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5 	ENSMUST00000086165.3|Sytl5|ENSMUSG00000054453.5|synaptotagmin-like 5
mm10_v2_chr2_-_153241402_153241426	0.390329	ACUGGCC	ENSMUST00000056924.7|Plagl2|ENSMUSG00000051413.11|pleiomorphic adenoma gene-like 2
mm10_v2_chr4_+_17853451_17853474	0.375159	ACUGGCC	ENSMUST00000029881.3|Mmp16|ENSMUSG00000028226.9|matrix metallopeptidase 16
mm10_v2_chr10_-_62792243_62792368	0.337999	ACUGGCC	ENSMUST00000020268.5|Ccar1|ENSMUSG00000020074.6|cell division cycle and apoptosis regulator 1
mm10_v2_chr2_-_60963192_60963251	0.328851	ACUGGCC	ENSMUST00000028347.6|Rbms1|ENSMUSG00000026970.10|RNA binding motif, single stranded interacting protein 1
mm10_v2_chr17_+_8801742_8801751	0.326314	ACUGGCC	ENSMUST00000089085.2|Pde10a|ENSMUSG00000023868.9|phosphodiesterase 10A
mm10_v2_chr2_+_24367565_24367620	0.323294	ACUGGCC	ENSMUST00000102942.1|Psd4|ENSMUSG00000026979.10|pleckstrin and Sec7 domain containing 4
mm10_v2_chr19_-_41802028_41802084	0.323149	ACUGGCC	ENSMUST00000026150.8|Arhgap19|ENSMUSG00000025154.8|Rho GTPase activating protein 19 	ENSMUST00000177495.1|Arhgap19|ENSMUSG00000025154.8|Rho GTPase activating protein 19 	ENSMUST00000163265.1|Arhgap19|ENSMUSG00000025154.8|Rho GTPase activating protein 19
mm10_v2_chr2_+_121955964_121956001	0.316004	ACUGGCC	ENSMUST00000036647.6|Ctdspl2|ENSMUSG00000033411.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm10_v2_chr12_-_15816762_15816881	0.305477	ACUGGCC	ENSMUST00000020922.7|Trib2|ENSMUSG00000020601.7|tribbles homolog 2 (Drosophila)
mm10_v2_chr5_+_75574916_75575001	0.276231	ACUGGCC	ENSMUST00000144270.1|Kit|ENSMUSG00000005672.6|kit oncogene 	ENSMUST00000005815.6|Kit|ENSMUSG00000005672.6|kit oncogene
mm10_v2_chr12_-_46818749_46818788	0.262331	ACUGGCC	ENSMUST00000021438.6|Nova1|ENSMUSG00000021047.6|neuro-oncological ventral antigen 1
mm10_v2_chr11_-_49712674_49712726	0.25167	ACUGGCC	ENSMUST00000020624.6|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6 	ENSMUST00000145353.1|Cnot6|ENSMUSG00000020362.7|CCR4-NOT transcription complex, subunit 6
mm10_v2_chr1_-_186705980_186705999	0.237574	ACUGGCC	ENSMUST00000045288.8|Tgfb2|ENSMUSG00000039239.9|transforming growth factor, beta 2
mm10_v2_chr5_-_139325616_139325627	0.233419	ACUGGCC	ENSMUST00000110865.1|Adap1|ENSMUSG00000056413.10|ArfGAP with dual PH domains 1
mm10_v2_chr19_+_45363734_45363831	0.22011	ACUGGCC	ENSMUST00000065601.5|Btrc|ENSMUSG00000025217.8|beta-transducin repeat containing protein 	ENSMUST00000111936.2|Btrc|ENSMUSG00000025217.8|beta-transducin repeat containing protein
mm10_v2_chr11_+_111066154_111066174	0.204956	ACUGGCC	ENSMUST00000042970.2|Kcnj2|ENSMUSG00000041695.2|potassium inwardly-rectifying channel, subfamily J, member 2
mm10_v2_chr3_-_95228636_95228719	0.202671	ACUGGCC	ENSMUST00000065482.5|Mllt11|ENSMUSG00000053192.5|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
mm10_v2_chr11_-_98545800_98545819	0.200728	ACUGGCC	ENSMUST00000103141.3|Ikzf3|ENSMUSG00000018168.8|IKAROS family zinc finger 3
mm10_v2_chr16_+_33684460_33684472	0.195071	ACUGGCC	ENSMUST00000152782.1|Heg1|ENSMUSG00000075254.5|HEG homolog 1 (zebrafish) 	ENSMUST00000179453.1|Heg1|ENSMUSG00000075254.5|HEG homolog 1 (zebrafish)
mm10_v2_chr8_-_86745950_86746054	0.191345	ACUGGCC	ENSMUST00000045296.4|Siah1a|ENSMUSG00000036840.4|seven in absentia 1A
mm10_v2_chr2_-_140671462_140671476	0.189717	ACUGGCC	ENSMUST00000110057.2|Flrt3|ENSMUSG00000051379.6|fibronectin leucine rich transmembrane protein 3
mm10_v2_chr1_-_153332724_153332804	0.188897	ACUGGCC	ENSMUST00000027752.8|Lamc1|ENSMUSG00000026478.8|laminin, gamma 1
mm10_v2_chr12_-_69681795_69681869	0.166915	ACUGGCC	ENSMUST00000183277.1|Sos2|ENSMUSG00000034801.7|son of sevenless homolog 2 (Drosophila) 	ENSMUST00000035773.7|Sos2|ENSMUSG00000034801.7|son of sevenless homolog 2 (Drosophila)
mm10_v2_chr9_+_35421541_35421616	0.163323	ACUGGCC	ENSMUST00000119129.2|Cdon|ENSMUSG00000038119.8|cell adhesion molecule-related/down-regulated by oncogenes
mm10_v2_chr5_-_107289561_107289637	0.162915	ACUGGCC	ENSMUST00000031224.8|Tgfbr3|ENSMUSG00000029287.8|transforming growth factor, beta receptor III
mm10_v2_chr3_-_153725062_153725179	0.156738	ACUGGCC	ENSMUST00000064460.5|St6galnac3|ENSMUSG00000052544.5|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
mm10_v2_chr6_-_39206782_39206831	0.142009	ACUGGCC	ENSMUST00000002305.8|Jhdm1d|ENSMUSG00000042599.8|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm10_v2_chr5_-_32854185_32854256	0.141301	ACUGGCC	ENSMUST00000130134.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like 	ENSMUST00000120129.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like
mm10_v2_chr3_+_38886940_38886940	0.140985	ACUGGCC	ENSMUST00000061260.7|Fat4|ENSMUSG00000046743.6|FAT tumor suppressor homolog 4 (Drosophila)
mm10_v2_chr19_+_53600377_53600435	0.139739	ACUGGCC	ENSMUST00000025930.9|Smc3|ENSMUSG00000024974.10|structural maintenance of chromosomes 3
mm10_v2_chr16_+_20535475_20535546	0.137435	ACUGGCC	ENSMUST00000090023.6|Ap2m1|ENSMUSG00000022841.8|adaptor-related protein complex 2, mu 1 subunit 	ENSMUST00000007216.8|Ap2m1|ENSMUSG00000022841.8|adaptor-related protein complex 2, mu 1 subunit
mm10_v2_chr9_-_32541589_32541602	0.122215	ACUGGCC	ENSMUST00000016231.7|Fli1|ENSMUSG00000016087.7|Friend leukemia integration 1
mm10_v2_chr1_-_152766281_152766319	0.120106	ACUGGCC	ENSMUST00000111859.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1 	ENSMUST00000148865.1|Rgl1|ENSMUSG00000026482.7|ral guanine nucleotide dissociation stimulator,-like 1
mm10_v2_chr11_+_46055973_46056068	0.0987634	ACUGGCC	ENSMUST00000011400.7|Adam19|ENSMUSG00000011256.10|a disintegrin and metallopeptidase domain 19 (meltrin beta)
mm10_v2_chr10_+_69533761_69533776	0.0974312	ACUGGCC	ENSMUST00000182884.1|Ank3|ENSMUSG00000069601.7|ankyrin 3, epithelial
mm10_v2_chr9_+_113930934_113930987	0.0972843	ACUGGCC	ENSMUST00000084885.5|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1 	ENSMUST00000009885.7|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1
mm10_v2_chr12_-_90738438_90738438	0.0970303	ACUGGCC	ENSMUST00000082432.3|Dio2|ENSMUSG00000007682.5|deiodinase, iodothyronine, type II
mm10_v2_chr9_+_32696005_32696121	0.0930605	ACUGGCC	ENSMUST00000034534.6|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000050797.7|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000184887.1|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain
mm10_v2_chr4_+_15881255_15881272	0.0907534	ACUGGCC	ENSMUST00000029876.1|Calb1|ENSMUSG00000028222.2|calbindin 1
mm10_v2_chr18_+_69345721_69345811	0.0831913	ACUGGCC	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr18_+_78349754_78349754	0.0830078	ACUGGCC	ENSMUST00000164064.1|Gm6133|ENSMUSG00000090451.1|predicted gene 6133
mm10_v2_chr3_+_152210458_152210534	0.0765672	ACUGGCC	ENSMUST00000166984.1|Fubp1|ENSMUSG00000028034.9|far upstream element (FUSE) binding protein 1 	ENSMUST00000106121.1|Fubp1|ENSMUSG00000028034.9|far upstream element (FUSE) binding protein 1
mm10_v2_chr7_-_116237767_116237781	0.0737985	ACUGGCC	ENSMUST00000182834.1|Plekha7|ENSMUSG00000045659.11|pleckstrin homology domain containing, family A member 7
mm10_v2_chr13_+_49341549_49341623	0.0681698	ACUGGCC	ENSMUST00000110084.2|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000048544.6|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000110085.3|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila)
mm10_v2_chr9_+_106170918_106170953	0.0669751	ACUGGCC	ENSMUST00000020490.5|Wdr82|ENSMUSG00000020257.6|WD repeat domain containing 82
mm10_v2_chr10_-_128891674_128891718	0.0662412	ACUGGCC	ENSMUST00000026408.6|Gdf11|ENSMUSG00000025352.6|growth differentiation factor 11
mm10_v2_chr6_+_7844806_7844859	0.0627892	ACUGGCC	ENSMUST00000040159.4|C1galt1|ENSMUSG00000042460.4|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
mm10_v2_chr6_-_145250177_145250259	0.06216	ACUGGCC	ENSMUST00000111710.1|Kras|ENSMUSG00000030265.8|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 	ENSMUST00000155145.1|Kras|ENSMUSG00000030265.8|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 	ENSMUST00000032399.5|Kras|ENSMUSG00000030265.8|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog
mm10_v2_chr2_+_162931520_162931536	0.0591593	ACUGGCC	ENSMUST00000130411.1|Srsf6|ENSMUSG00000016921.8|serine/arginine-rich splicing factor 6
mm10_v2_chr11_+_106036867_106036924	0.0418448	ACUGGCC	ENSMUST00000058438.8|Dcaf7|ENSMUSG00000049354.8|DDB1 and CUL4 associated factor 7
mm10_v2_chr11_-_94321957_94321988	0.0415473	ACUGGCC	ENSMUST00000166312.1|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae) 	ENSMUST00000107821.2|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae) 	ENSMUST00000021226.7|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae) 	ENSMUST00000107820.1|Luc7l3|ENSMUSG00000020863.9|LUC7-like 3 (S. cerevisiae)
mm10_v2_chr5_+_43868802_43868866	0.0297355	ACUGGCC	ENSMUST00000030964.4|Cd38|ENSMUSG00000029084.4|CD38 antigen
mm10_v2_chr11_+_107547925_107547968	0.0274402	ACUGGCC	ENSMUST00000100305.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain 	ENSMUST00000075012.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain 	ENSMUST00000106746.1|Helz|ENSMUSG00000020721.10|helicase with zinc finger domain
mm10_v2_chr18_-_46280820_46280850	0.0274252	ACUGGCC	ENSMUST00000025354.3|Pggt1b|ENSMUSG00000024477.3|protein geranylgeranyltransferase type I, beta subunit
mm10_v2_chr10_+_128092771_128092819	0.0241432	ACUGGCC	ENSMUST00000170054.2|Baz2a|ENSMUSG00000040054.9|bromodomain adjacent to zinc finger domain, 2A 	ENSMUST00000045621.8|Baz2a|ENSMUSG00000040054.9|bromodomain adjacent to zinc finger domain, 2A
mm10_v2_chr9_+_108795971_108795994	0.0236876	ACUGGCC	ENSMUST00000085018.4|Ip6k2|ENSMUSG00000032599.7|inositol hexaphosphate kinase 2
mm10_v2_chr1_+_93803945_93803998	0.0236013	ACUGGCC	ENSMUST00000027505.6|Ing5|ENSMUSG00000026283.7|inhibitor of growth family, member 5
mm10_v2_chr11_+_60537978_60538074	0.0164769	ACUGGCC	ENSMUST00000044250.3|Alkbh5|ENSMUSG00000042650.3|alkB, alkylation repair homolog 5 (E. coli)
mm10_v2_chr4_-_53159885_53159900	0.0158382	ACUGGCC	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr13_-_93499803_93499825	0.0128175	ACUGGCC	ENSMUST00000065537.7|Jmy|ENSMUSG00000021690.9|junction-mediating and regulatory protein
mm10_v2_chr12_+_16810940_16810978	0.0115119	ACUGGCC	ENSMUST00000020908.7|E2f6|ENSMUSG00000057469.7|E2F transcription factor 6
mm10_v2_chr12_-_12941827_12941914	0.0108323	ACUGGCC	ENSMUST00000043396.7|Mycn|ENSMUSG00000037169.8|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
mm10_v2_chr1_+_43098710_43098760	0.0100824	ACUGGCC	ENSMUST00000010434.7|AI597479|ENSMUSG00000010290.7|expressed sequence AI597479
mm10_v2_chr12_-_79089623_79089670	0.0085569	ACUGGCC	ENSMUST00000072154.7|Pigh|ENSMUSG00000021120.10|phosphatidylinositol glycan anchor biosynthesis, class H
mm10_v2_chr4_+_155734800_155734874	0.00781403	ACUGGCC	ENSMUST00000147721.1|Tmem240|ENSMUSG00000084845.3|transmembrane protein 240 	ENSMUST00000127188.2|Tmem240|ENSMUSG00000084845.3|transmembrane protein 240
mm10_v2_chr7_+_97579868_97579901	0.00727527	ACUGGCC	ENSMUST00000042399.7|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1 	ENSMUST00000107153.1|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1
mm10_v2_chr19_+_8819401_8819401	0.00348905	ACUGGCC	ENSMUST00000096753.3|Hnrnpul2|ENSMUSG00000071659.3|heterogeneous nuclear ribonucleoprotein U-like 2
mm10_v2_chr10_-_39133848_39133912	0.00113218	ACUGGCC	ENSMUST00000134279.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000139743.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000149949.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000124941.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000125042.1|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B 	ENSMUST00000063204.2|Fam229b|ENSMUSG00000051736.2|family with sequence similarity 229, member B
