mm10_v2_chr18_+_42511496_42511521	2.41194	ACAUUCA	ENSMUST00000025375.7|Tcerg1|ENSMUSG00000024498.9|transcription elongation regulator 1 (CA150)
mm10_v2_chr5_+_52741569_52741623	2.12463	ACAUUCA	ENSMUST00000031081.4|Pi4k2b|ENSMUSG00000029186.6|phosphatidylinositol 4-kinase type 2 beta 	ENSMUST00000031082.6|Pi4k2b|ENSMUSG00000029186.6|phosphatidylinositol 4-kinase type 2 beta
mm10_v2_chr10_-_123196916_123196961	1.97656	ACAUUCA	ENSMUST00000020334.7|Usp15|ENSMUSG00000020124.9|ubiquitin specific peptidase 15
mm10_v2_chr10_-_86705485_86705509	1.86943	ACAUUCA	ENSMUST00000020238.7|Hsp90b1|ENSMUSG00000020048.7|heat shock protein 90, beta (Grp94), member 1
mm10_v2_chr13_+_113209659_113209772	1.82924	ACAUUCA	ENSMUST00000038144.8|Esm1|ENSMUSG00000042379.8|endothelial cell-specific molecule 1
mm10_v2_chr10_+_20312461_20312492	1.75754	ACAUUCA	ENSMUST00000092678.3|Bclaf1|ENSMUSG00000037608.9|BCL2-associated transcription factor 1 	ENSMUST00000043881.5|Bclaf1|ENSMUSG00000037608.9|BCL2-associated transcription factor 1
mm10_v2_chr16_-_31201150_31201243	1.75684	ACAUUCA	ENSMUST00000058033.7|Acap2|ENSMUSG00000049076.9|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
mm10_v2_chr2_+_180042496_180042562	1.72328	ACAUUCA	ENSMUST00000041126.8|Ss18l1|ENSMUSG00000039086.9|synovial sarcoma translocation gene on chromosome 18-like 1
mm10_v2_chr14_-_18239053_18239127	1.70964	ACAUUCA	ENSMUST00000090543.5|Nr1d2|ENSMUSG00000021775.10|nuclear receptor subfamily 1, group D, member 2
mm10_v2_chr13_-_111490111_111490139	1.67451	ACAUUCA	ENSMUST00000047627.7|Gpbp1|ENSMUSG00000032745.11|GC-rich promoter binding protein 1
mm10_v2_chr10_+_7681197_7681225	1.65708	ACAUUCA	ENSMUST00000165952.1|Lats1|ENSMUSG00000040021.6|large tumor suppressor
mm10_v2_chr8_-_85432841_85432859	1.65632	ACAUUCA	ENSMUST00000047749.5|4921524J17Rik|ENSMUSG00000036934.8|RIKEN cDNA 4921524J17 gene
mm10_v2_chr7_-_42592547_42592547	1.60344	ACAUUCA	ENSMUST00000173283.1|Gm7221|ENSMUSG00000092335.1|predicted gene 7221
mm10_v2_chrX_-_53370470_53370502	1.60083	ACAUUCA	ENSMUST00000096447.2|Mospd1|ENSMUSG00000023074.5|motile sperm domain containing 1 	ENSMUST00000023836.3|Mospd1|ENSMUSG00000023074.5|motile sperm domain containing 1
mm10_v2_chr5_+_108065742_108065767	1.5035	ACAUUCA	ENSMUST00000081567.4|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000170319.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2 	ENSMUST00000112626.1|Mtf2|ENSMUSG00000029267.11|metal response element binding transcription factor 2
mm10_v2_chr9_-_114564315_114564369	1.50322	ACAUUCA	ENSMUST00000111816.2|Trim71|ENSMUSG00000079259.2|tripartite motif-containing 71
mm10_v2_chr10_-_81747503_81747503	1.49505	ACAUUCA	ENSMUST00000105316.2|Gm3055|ENSMUSG00000094622.1|predicted gene 3055
mm10_v2_chr2_-_125859139_125859221	1.42934	ACAUUCA	ENSMUST00000110463.1|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana) 	ENSMUST00000028635.5|Cops2|ENSMUSG00000027206.7|COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)
mm10_v2_chr10_+_108332173_108332189	1.40695	ACAUUCA	ENSMUST00000095313.3|Pawr|ENSMUSG00000035873.7|PRKC, apoptosis, WT1, regulator
mm10_v2_chr3_+_146404631_146404738	1.39635	ACAUUCA	ENSMUST00000106153.2|Ssx2ip|ENSMUSG00000036825.6|synovial sarcoma, X breakpoint 2 interacting protein 	ENSMUST00000039021.4|Ssx2ip|ENSMUSG00000036825.6|synovial sarcoma, X breakpoint 2 interacting protein 	ENSMUST00000106151.1|Ssx2ip|ENSMUSG00000036825.6|synovial sarcoma, X breakpoint 2 interacting protein 	ENSMUST00000149262.1|Ssx2ip|ENSMUSG00000036825.6|synovial sarcoma, X breakpoint 2 interacting protein
mm10_v2_chr5_+_32458974_32459110	1.37877	ACAUUCA	ENSMUST00000015100.8|Ppp1cb|ENSMUSG00000014956.9|protein phosphatase 1, catalytic subunit, beta isoform
mm10_v2_chr10_+_86300372_86300372	1.35793	ACAUUCA	ENSMUST00000020234.7|Timp3|ENSMUSG00000020044.7|tissue inhibitor of metalloproteinase 3
mm10_v2_chr5_-_25498702_25498745	1.33646	ACAUUCA	ENSMUST00000173073.1|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C 	ENSMUST00000045291.7|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C
mm10_v2_chrX_+_13280970_13281031	1.31824	ACAUUCA	ENSMUST00000000804.6|Ddx3x|ENSMUSG00000000787.6|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm10_v2_chr1_+_64532790_64532815	1.30731	ACAUUCA	ENSMUST00000049932.5|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000087366.4|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000171164.1|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1
mm10_v2_chr15_-_96699698_96699717	1.29618	ACAUUCA	ENSMUST00000023099.6|Slc38a2|ENSMUSG00000022462.6|solute carrier family 38, member 2
mm10_v2_chr11_+_20543307_20543336	1.29495	ACAUUCA	ENSMUST00000093292.4|Sertad2|ENSMUSG00000049800.7|SERTA domain containing 2
mm10_v2_chr7_-_42692718_42692773	1.28765	ACAUUCA	ENSMUST00000107992.1|Gm5595|ENSMUSG00000069727.4|predicted gene 5595
mm10_v2_chrX_+_42067836_42067872	1.28197	ACAUUCA	ENSMUST00000115094.1|Xiap|ENSMUSG00000025860.8|X-linked inhibitor of apoptosis
mm10_v2_chr8_+_69226343_69226343	1.28191	ACAUUCA	ENSMUST00000110216.1|Zfp930|ENSMUSG00000059897.4|zinc finger protein 930
mm10_v2_chr1_-_80340480_80340512	1.2675	ACAUUCA	ENSMUST00000163119.1|Cul3|ENSMUSG00000004364.8|cullin 3
mm10_v2_chr15_-_54278420_54278484	1.26636	ACAUUCA	ENSMUST00000079772.3|Tnfrsf11b|ENSMUSG00000063727.3|tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)
mm10_v2_chr10_-_5069044_5069079	1.26456	ACAUUCA	ENSMUST00000095899.3|Syne1|ENSMUSG00000019769.10|spectrin repeat containing, nuclear envelope 1
mm10_v2_chrX_-_111463043_111463081	1.26037	ACAUUCA	ENSMUST00000065976.5|Rps6ka6|ENSMUSG00000025665.10|ribosomal protein S6 kinase polypeptide 6
mm10_v2_chr4_-_59549314_59549364	1.25928	ACAUUCA	ENSMUST00000148331.2|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3 	ENSMUST00000030076.5|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3
mm10_v2_chr11_+_93996082_93996103	1.25476	ACAUUCA	ENSMUST00000041956.7|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr7_-_67372846_67372858	1.25157	ACAUUCA	ENSMUST00000156690.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000107476.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000076325.5|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000032776.8|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000133074.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A
mm10_v2_chr17_-_21845759_21845759	1.23646	ACAUUCA	ENSMUST00000084141.4|Zfp820|ENSMUSG00000069743.4|zinc finger protein 820
mm10_v2_chr12_+_78748947_78748971	1.21297	ACAUUCA	ENSMUST00000082024.5|Mpp5|ENSMUSG00000021112.8|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm10_v2_chr18_-_39490649_39490717	1.20706	ACAUUCA	ENSMUST00000115567.1|Nr3c1|ENSMUSG00000024431.8|nuclear receptor subfamily 3, group C, member 1
mm10_v2_chr16_+_78301458_78301496	1.1951	ACAUUCA	ENSMUST00000023572.7|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr5_-_20882072_20882124	1.1931	ACAUUCA	ENSMUST00000118174.1|Phtf2|ENSMUSG00000039987.9|putative homeodomain transcription factor 2
mm10_v2_chr10_+_111164794_111164811	1.18713	ACAUUCA	ENSMUST00000105275.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8 	ENSMUST00000095310.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8
mm10_v2_chr10_+_98915117_98915172	1.16562	ACAUUCA	ENSMUST00000020107.7|Atp2b1|ENSMUSG00000019943.9|ATPase, Ca++ transporting, plasma membrane 1
mm10_v2_chr8_+_90828820_90828842	1.15382	ACAUUCA	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr13_+_5861489_5861501	1.15109	ACAUUCA	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr3_+_151437887_151437914	1.14711	ACAUUCA	ENSMUST00000046977.7|Eltd1|ENSMUSG00000039167.7|EGF, latrophilin seven transmembrane domain containing 1
mm10_v2_chr3_+_122729158_122729182	1.14336	ACAUUCA	ENSMUST00000066728.5|Pde5a|ENSMUSG00000053965.6|phosphodiesterase 5A, cGMP-specific
mm10_v2_chr15_-_8444449_8444506	1.13561	ACAUUCA	ENSMUST00000052965.6|Nipbl|ENSMUSG00000022141.6|Nipped-B homolog (Drosophila)
mm10_v2_chr1_-_95667555_95667597	1.12509	ACAUUCA	ENSMUST00000043336.4|St8sia4|ENSMUSG00000040710.4|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
mm10_v2_chr10_-_62792243_62792368	1.12368	ACAUUCA	ENSMUST00000020268.5|Ccar1|ENSMUSG00000020074.6|cell division cycle and apoptosis regulator 1
mm10_v2_chr3_-_79567679_79567764	1.12227	ACAUUCA	ENSMUST00000076136.4|Fnip2|ENSMUSG00000061175.5|folliculin interacting protein 2
mm10_v2_chr2_+_175275125_175275125	1.12193	ACAUUCA	ENSMUST00000109051.1|Gm14440|ENSMUSG00000078901.2|predicted gene 14440
mm10_v2_chr18_+_44828471_44828665	1.1141	ACAUUCA	ENSMUST00000037763.7|Ythdc2|ENSMUSG00000034653.8|YTH domain containing 2
mm10_v2_chr6_+_7844806_7844859	1.104	ACAUUCA	ENSMUST00000040159.4|C1galt1|ENSMUSG00000042460.4|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
mm10_v2_chr5_+_146231211_146231385	1.10145	ACAUUCA	ENSMUST00000161181.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000161652.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000031640.8|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000159467.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8
mm10_v2_chr2_+_134786154_134786170	1.09994	ACAUUCA	ENSMUST00000110116.1|Plcb1|ENSMUSG00000051177.10|phospholipase C, beta 1
mm10_v2_chr17_-_88065291_88065291	1.09369	ACAUUCA	ENSMUST00000005504.8|Fbxo11|ENSMUSG00000005371.8|F-box protein 11
mm10_v2_chr5_-_123684289_123684379	1.09344	ACAUUCA	ENSMUST00000111564.1|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1 	ENSMUST00000063905.5|Clip1|ENSMUSG00000049550.11|CAP-GLY domain containing linker protein 1
mm10_v2_chr3_+_152395991_152396059	1.09325	ACAUUCA	ENSMUST00000106100.2|Zzz3|ENSMUSG00000039068.10|zinc finger, ZZ domain containing 3
mm10_v2_chr7_+_90130227_90130279	1.0889	ACAUUCA	ENSMUST00000049537.7|Picalm|ENSMUSG00000039361.9|phosphatidylinositol binding clathrin assembly protein
mm10_v2_chr6_+_149309391_149309438	1.08239	ACAUUCA	ENSMUST00000130664.1|2810474O19Rik|ENSMUSG00000032712.10|RIKEN cDNA 2810474O19 gene 	ENSMUST00000046689.6|2810474O19Rik|ENSMUSG00000032712.10|RIKEN cDNA 2810474O19 gene
mm10_v2_chr9_+_64811313_64811340	1.08032	ACAUUCA	ENSMUST00000038890.5|Dennd4a|ENSMUSG00000053641.8|DENN/MADD domain containing 4A
mm10_v2_chr19_-_41263931_41264008	1.07984	ACAUUCA	ENSMUST00000025989.8|Tm9sf3|ENSMUSG00000025016.10|transmembrane 9 superfamily member 3
mm10_v2_chr16_+_44139821_44139900	1.07001	ACAUUCA	ENSMUST00000159514.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000161326.1|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063520.8|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENSMUST00000063542.7|Naa50|ENSMUSG00000022698.11|N(alpha)-acetyltransferase 50, NatE catalytic subunit
mm10_v2_chr1_-_190170671_190170744	1.06997	ACAUUCA	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr11_-_20741447_20741524	1.06584	ACAUUCA	ENSMUST00000177543.1|Aftph|ENSMUSG00000049659.9|aftiphilin
mm10_v2_chr11_+_31872100_31872226	1.06358	ACAUUCA	ENSMUST00000020543.6|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4 	ENSMUST00000109412.2|Cpeb4|ENSMUSG00000020300.8|cytoplasmic polyadenylation element binding protein 4
mm10_v2_chr1_-_162740350_162740533	1.06086	ACAUUCA	ENSMUST00000182331.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000183011.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000182593.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000182149.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C
mm10_v2_chrX_+_159255782_159255899	1.05802	ACAUUCA	ENSMUST00000126686.1|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3 	ENSMUST00000033671.6|Rps6ka3|ENSMUSG00000031309.9|ribosomal protein S6 kinase polypeptide 3
mm10_v2_chr11_-_90687572_90687607	1.04651	ACAUUCA	ENSMUST00000107869.2|Tom1l1|ENSMUSG00000020541.6|target of myb1-like 1 (chicken) 	ENSMUST00000154599.1|Tom1l1|ENSMUSG00000020541.6|target of myb1-like 1 (chicken) 	ENSMUST00000107868.1|Tom1l1|ENSMUSG00000020541.6|target of myb1-like 1 (chicken) 	ENSMUST00000020849.2|Tom1l1|ENSMUSG00000020541.6|target of myb1-like 1 (chicken)
mm10_v2_chr19_-_34747289_34747313	1.03692	ACAUUCA	ENSMUST00000009522.3|Slc16a12|ENSMUSG00000009378.3|solute carrier family 16 (monocarboxylic acid transporters), member 12
mm10_v2_chr2_-_52424826_52424916	1.03299	ACAUUCA	ENSMUST00000036541.7|Arl5a|ENSMUSG00000036093.7|ADP-ribosylation factor-like 5A
mm10_v2_chr2_-_70825726_70825820	1.02963	ACAUUCA	ENSMUST00000038584.8|Tlk1|ENSMUSG00000041997.10|tousled-like kinase 1
mm10_v2_chr18_-_64660981_64661010	1.01782	ACAUUCA	ENSMUST00000025482.8|Atp8b1|ENSMUSG00000039529.8|ATPase, class I, type 8B, member 1
mm10_v2_chr13_+_49421229_49421311	1.01286	ACAUUCA	ENSMUST00000021817.8|Ippk|ENSMUSG00000021385.9|inositol 1,3,4,5,6-pentakisphosphate 2-kinase
mm10_v2_chr13_+_49653297_49653367	1.00768	ACAUUCA	ENSMUST00000021824.7|Nol8|ENSMUSG00000021392.7|nucleolar protein 8
mm10_v2_chr1_-_143702832_143702893	1.00644	ACAUUCA	ENSMUST00000018337.7|Cdc73|ENSMUSG00000026361.7|cell division cycle 73, Paf1/RNA polymerase II complex component
mm10_v2_chr7_-_42642547_42642609	1.00578	ACAUUCA	ENSMUST00000098503.2|9830147E19Rik|ENSMUSG00000074158.3|RIKEN cDNA 9830147E19 gene
mm10_v2_chr18_+_42275353_42275392	0.990974	ACAUUCA	ENSMUST00000046972.7|Rbm27|ENSMUSG00000024491.9|RNA binding motif protein 27 	ENSMUST00000091920.5|Rbm27|ENSMUSG00000024491.9|RNA binding motif protein 27
mm10_v2_chr10_-_81910899_81910899	0.975077	ACAUUCA	ENSMUST00000076281.5|Zfp781|ENSMUSG00000096718.1|zinc finger protein 781
mm10_v2_chr1_+_57377593_57377689	0.969679	ACAUUCA	ENSMUST00000042734.2|1700066M21Rik|ENSMUSG00000038323.2|RIKEN cDNA 1700066M21 gene
mm10_v2_chr16_-_85803106_85803121	0.968855	ACAUUCA	ENSMUST00000023610.8|Adamts1|ENSMUSG00000022893.8|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1
mm10_v2_chr12_+_64965742_64965775	0.960254	ACAUUCA	ENSMUST00000066296.7|Fam179b|ENSMUSG00000035614.10|family with sequence similarity 179, member B
mm10_v2_chr19_+_44931119_44931172	0.959588	ACAUUCA	ENSMUST00000096053.3|Fam178a|ENSMUSG00000036097.7|family with sequence similarity 178, member A
mm10_v2_chr14_-_103099499_103099554	0.951162	ACAUUCA	ENSMUST00000022720.8|Fbxl3|ENSMUSG00000022124.8|F-box and leucine-rich repeat protein 3
mm10_v2_chr3_+_108571699_108571699	0.948935	ACAUUCA	ENSMUST00000143054.1|Taf13|ENSMUSG00000048100.7|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm10_v2_chr7_-_28008416_28008416	0.94766	ACAUUCA	ENSMUST00000180024.1|Zfp850|ENSMUSG00000096916.1|zinc finger protein 850
mm10_v2_chr17_+_17121415_17121415	0.944066	ACAUUCA	ENSMUST00000147630.1|Zfp97|ENSMUSG00000095990.1|zinc finger protein 97
mm10_v2_chrX_+_56346390_56346415	0.931235	ACAUUCA	ENSMUST00000101560.3|Zfp449|ENSMUSG00000073176.4|zinc finger protein 449
mm10_v2_chr14_+_120275669_120275714	0.928425	ACAUUCA	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chr2_+_119897212_119897305	0.927286	ACAUUCA	ENSMUST00000046717.6|Mga|ENSMUSG00000033943.9|MAX gene associated 	ENSMUST00000110774.1|Mga|ENSMUSG00000033943.9|MAX gene associated 	ENSMUST00000110773.2|Mga|ENSMUSG00000033943.9|MAX gene associated 	ENSMUST00000079934.5|Mga|ENSMUSG00000033943.9|MAX gene associated 	ENSMUST00000156510.1|Mga|ENSMUSG00000033943.9|MAX gene associated
mm10_v2_chr9_+_108692116_108692193	0.925792	ACAUUCA	ENSMUST00000035220.6|Prkar2a|ENSMUSG00000032601.8|protein kinase, cAMP dependent regulatory, type II alpha
mm10_v2_chr12_+_83632208_83632325	0.925683	ACAUUCA	ENSMUST00000048155.9|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182618.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000183154.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182036.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182347.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25
mm10_v2_chr2_-_104816696_104816792	0.911936	ACAUUCA	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr7_-_47008397_47008421	0.905689	ACAUUCA	ENSMUST00000061639.7|Spty2d1|ENSMUSG00000049516.7|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
mm10_v2_chr13_+_93308006_93308034	0.902092	ACAUUCA	ENSMUST00000079086.6|Homer1|ENSMUSG00000007617.11|homer homolog 1 (Drosophila)
mm10_v2_chr11_-_53480178_53480216	0.894855	ACAUUCA	ENSMUST00000104955.2|Sowaha|ENSMUSG00000044352.5|sosondowah ankyrin repeat domain family member A
mm10_v2_chr4_+_47353222_47353265	0.882462	ACAUUCA	ENSMUST00000007757.8|Tgfbr1|ENSMUSG00000007613.9|transforming growth factor, beta receptor I
mm10_v2_chr3_-_84304762_84304809	0.881796	ACAUUCA	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr3_+_16183177_16183206	0.8793	ACAUUCA	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr15_+_9140527_9140621	0.875639	ACAUUCA	ENSMUST00000090380.4|Lmbrd2|ENSMUSG00000039704.6|LMBR1 domain containing 2
mm10_v2_chr5_+_16553488_16553550	0.859366	ACAUUCA	ENSMUST00000030683.3|Hgf|ENSMUSG00000028864.3|hepatocyte growth factor
mm10_v2_chr10_-_45470201_45470260	0.857345	ACAUUCA	ENSMUST00000079390.6|Lin28b|ENSMUSG00000063804.7|lin-28 homolog B (C. elegans)
mm10_v2_chr1_+_179960472_179960585	0.854677	ACAUUCA	ENSMUST00000097453.2|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha 	ENSMUST00000111117.1|Cdc42bpa|ENSMUSG00000026490.11|CDC42 binding protein kinase alpha
mm10_v2_chr6_-_28261907_28261943	0.854617	ACAUUCA	ENSMUST00000115320.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000123098.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000115321.2|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000155494.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800
mm10_v2_chr10_-_17947997_17948098	0.851454	ACAUUCA	ENSMUST00000037879.6|Heca|ENSMUSG00000039879.8|headcase homolog (Drosophila)
mm10_v2_chr2_+_176802233_176802233	0.846805	ACAUUCA	ENSMUST00000132883.1|Gm14295|ENSMUSG00000078877.5|predicted gene 14295
mm10_v2_chr14_-_105176860_105176918	0.841718	ACAUUCA	ENSMUST00000163545.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr17_+_64600702_64600739	0.840636	ACAUUCA	ENSMUST00000086723.3|Man2a1|ENSMUSG00000024085.7|mannosidase 2, alpha 1
mm10_v2_chrX_-_36902877_36902904	0.834585	ACAUUCA	ENSMUST00000057093.6|Nkrf|ENSMUSG00000044149.6|NF-kappaB repressing factor
mm10_v2_chr8_+_57511833_57511869	0.83305	ACAUUCA	ENSMUST00000067925.6|Hmgb2|ENSMUSG00000054717.6|high mobility group box 2
mm10_v2_chr2_+_109890846_109890882	0.82684	ACAUUCA	ENSMUST00000028583.7|Lin7c|ENSMUSG00000027162.7|lin-7 homolog C (C. elegans)
mm10_v2_chr16_-_74411292_74411430	0.82575	ACAUUCA	ENSMUST00000117200.1|Robo2|ENSMUSG00000052516.11|roundabout homolog 2 (Drosophila)
mm10_v2_chr2_+_49451486_49451559	0.822495	ACAUUCA	ENSMUST00000092123.4|Epc2|ENSMUSG00000069495.6|enhancer of polycomb homolog 2 (Drosophila)
mm10_v2_chr7_+_97579868_97579901	0.820133	ACAUUCA	ENSMUST00000042399.7|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1 	ENSMUST00000107153.1|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1
mm10_v2_chr1_-_136346074_136346145	0.81352	ACAUUCA	ENSMUST00000048309.6|Camsap2|ENSMUSG00000041570.9|calmodulin regulated spectrin-associated protein family, member 2
mm10_v2_chr6_-_13677930_13677974	0.812576	ACAUUCA	ENSMUST00000045235.5|B630005N14Rik|ENSMUSG00000042742.5|RIKEN cDNA B630005N14 gene
mm10_v2_chr7_-_42867234_42867234	0.807509	ACAUUCA	ENSMUST00000174558.1|Gm2381|ENSMUSG00000092225.1|predicted gene 2381
mm10_v2_chr6_-_148831448_148831494	0.792301	ACAUUCA	ENSMUST00000048418.7|Ipo8|ENSMUSG00000040029.8|importin 8
mm10_v2_chrX_+_85574018_85574150	0.789192	ACAUUCA	ENSMUST00000048250.3|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3 	ENSMUST00000137438.1|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3 	ENSMUST00000146063.1|Tab3|ENSMUSG00000035476.3|TGF-beta activated kinase 1/MAP3K7 binding protein 3
mm10_v2_chr13_-_62607499_62607499	0.786149	ACAUUCA	ENSMUST00000091563.4|6720489N17Rik|ENSMUSG00000072066.3|RIKEN cDNA 6720489N17 gene
mm10_v2_chr19_-_59345746_59345853	0.785714	ACAUUCA	ENSMUST00000099274.2|Pdzd8|ENSMUSG00000074746.2|PDZ domain containing 8
mm10_v2_chr13_+_81711407_81711457	0.781599	ACAUUCA	ENSMUST00000057598.5|Mblac2|ENSMUSG00000051098.5|metallo-beta-lactamase domain containing 2
mm10_v2_chr3_-_7613427_7613427	0.776695	ACAUUCA	ENSMUST00000168269.2|Il7|ENSMUSG00000040329.9|interleukin 7
mm10_v2_chr9_+_46998931_46998931	0.772115	ACAUUCA	ENSMUST00000178065.1|Gm4791|ENSMUSG00000094893.1|predicted gene 4791
mm10_v2_chr2_-_37647199_37647285	0.7716	ACAUUCA	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr9_-_66919646_66919710	0.768752	ACAUUCA	ENSMUST00000041139.7|Rab8b|ENSMUSG00000036943.8|RAB8B, member RAS oncogene family
mm10_v2_chr17_+_17064113_17064113	0.766078	ACAUUCA	ENSMUST00000127027.1|Zfp960|ENSMUSG00000096696.1|zinc finger protein 960
mm10_v2_chr14_-_103346765_103346841	0.764732	ACAUUCA	ENSMUST00000159855.1|Mycbp2|ENSMUSG00000033004.8|MYC binding protein 2
mm10_v2_chr4_-_99120898_99120935	0.755329	ACAUUCA	ENSMUST00000075836.5|Dock7|ENSMUSG00000028556.9|dedicator of cytokinesis 7
mm10_v2_chr17_+_74528279_74528295	0.752378	ACAUUCA	ENSMUST00000180037.1|Birc6|ENSMUSG00000024073.8|baculoviral IAP repeat-containing 6 	ENSMUST00000024879.6|Birc6|ENSMUSG00000024073.8|baculoviral IAP repeat-containing 6
mm10_v2_chr3_-_105801323_105801377	0.752075	ACAUUCA	ENSMUST00000090678.6|Rap1a|ENSMUSG00000068798.6|RAS-related protein-1a
mm10_v2_chr6_-_143100028_143100109	0.745598	ACAUUCA	ENSMUST00000111758.2|C2cd5|ENSMUSG00000030279.9|C2 calcium-dependent domain containing 5 	ENSMUST00000171349.1|C2cd5|ENSMUSG00000030279.9|C2 calcium-dependent domain containing 5 	ENSMUST00000087485.4|C2cd5|ENSMUSG00000030279.9|C2 calcium-dependent domain containing 5
mm10_v2_chr6_+_120666388_120666424	0.741785	ACAUUCA	ENSMUST00000112686.1|Cecr2|ENSMUSG00000071226.5|cat eye syndrome chromosome region, candidate 2
mm10_v2_chr9_-_97111117_97111159	0.741589	ACAUUCA	ENSMUST00000085206.4|Slc25a36|ENSMUSG00000032449.7|solute carrier family 25, member 36
mm10_v2_chr1_-_165934900_165935036	0.739048	ACAUUCA	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr17_+_26715644_26715724	0.737061	ACAUUCA	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr9_+_111271832_111271914	0.736677	ACAUUCA	ENSMUST00000060711.5|Epm2aip1|ENSMUSG00000046785.6|EPM2A (laforin) interacting protein 1
mm10_v2_chr13_-_47106176_47106206	0.73582	ACAUUCA	ENSMUST00000021807.6|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding) 	ENSMUST00000135278.1|Dek|ENSMUSG00000021377.8|DEK oncogene (DNA binding)
mm10_v2_chr1_-_80758536_80758558	0.721935	ACAUUCA	ENSMUST00000077946.5|Dock10|ENSMUSG00000038608.9|dedicator of cytokinesis 10
mm10_v2_chr9_+_123529843_123529882	0.720554	ACAUUCA	ENSMUST00000026270.7|Sacm1l|ENSMUSG00000025240.8|SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)
mm10_v2_chr9_-_104262900_104262949	0.71887	ACAUUCA	ENSMUST00000035170.6|Dnajc13|ENSMUSG00000032560.7|DnaJ (Hsp40) homolog, subfamily C, member 13
mm10_v2_chr10_+_71347736_71347763	0.715033	ACAUUCA	ENSMUST00000079252.6|Ipmk|ENSMUSG00000060733.7|inositol polyphosphate multikinase
mm10_v2_chr3_+_28263205_28263215	0.71323	ACAUUCA	ENSMUST00000159236.2|Tnik|ENSMUSG00000027692.10|TRAF2 and NCK interacting kinase
mm10_v2_chr13_-_74482943_74482943	0.712975	ACAUUCA	ENSMUST00000074369.6|Zfp825|ENSMUSG00000069208.5|zinc finger protein 825
mm10_v2_chr1_-_79671966_79671993	0.711471	ACAUUCA	ENSMUST00000162342.1|Ap1s3|ENSMUSG00000054702.8|adaptor-related protein complex AP-1, sigma 3
mm10_v2_chr9_-_54501496_54501644	0.704093	ACAUUCA	ENSMUST00000118600.1|Dmxl2|ENSMUSG00000041268.10|Dmx-like 2 	ENSMUST00000118163.1|Dmxl2|ENSMUSG00000041268.10|Dmx-like 2
mm10_v2_chr11_-_20112876_20112925	0.698305	ACAUUCA	ENSMUST00000000137.7|Actr2|ENSMUSG00000020152.7|ARP2 actin-related protein 2
mm10_v2_chr10_+_89744988_89745022	0.697711	ACAUUCA	ENSMUST00000020112.5|Uhrf1bp1l|ENSMUSG00000019951.9|UHRF1 (ICBP90) binding protein 1-like
mm10_v2_chr12_-_54986328_54986342	0.696458	ACAUUCA	ENSMUST00000038926.6|Baz1a|ENSMUSG00000035021.7|bromodomain adjacent to zinc finger domain 1A
mm10_v2_chr18_+_20944607_20944625	0.680397	ACAUUCA	ENSMUST00000050004.1|Rnf125|ENSMUSG00000033107.5|ring finger protein 125
mm10_v2_chr3_+_60501252_60501275	0.676107	ACAUUCA	ENSMUST00000099087.2|Mbnl1|ENSMUSG00000027763.8|muscleblind-like 1 (Drosophila)
mm10_v2_chr6_+_143167210_143167267	0.668376	ACAUUCA	ENSMUST00000032413.4|Etnk1|ENSMUSG00000030275.4|ethanolamine kinase 1
mm10_v2_chr5_+_53998417_53998575	0.665697	ACAUUCA	ENSMUST00000117661.2|Stim2|ENSMUSG00000039156.13|stromal interaction molecule 2 	ENSMUST00000071083.7|Stim2|ENSMUSG00000039156.13|stromal interaction molecule 2
mm10_v2_chr9_+_72274860_72274886	0.663401	ACAUUCA	ENSMUST00000184036.1|Zfp280d|ENSMUSG00000038535.11|zinc finger protein 280D 	ENSMUST00000184517.1|Zfp280d|ENSMUSG00000038535.11|zinc finger protein 280D 	ENSMUST00000098576.3|Zfp280d|ENSMUSG00000038535.11|zinc finger protein 280D
mm10_v2_chr5_-_149053038_149053053	0.662671	ACAUUCA	ENSMUST00000085546.6|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr11_-_20831009_20831056	0.662108	ACAUUCA	ENSMUST00000047028.8|Lgalsl|ENSMUSG00000042363.8|lectin, galactoside binding-like
mm10_v2_chr19_+_47731743_47731768	0.661209	ACAUUCA	ENSMUST00000099353.4|Sfr1|ENSMUSG00000025066.9|SWI5 dependent recombination repair 1
mm10_v2_chr5_+_124862674_124862771	0.655184	ACAUUCA	ENSMUST00000111417.2|Zfp664|ENSMUSG00000079215.2|zinc finger protein 664
mm10_v2_chr2_-_39190687_39190746	0.651731	ACAUUCA	ENSMUST00000142872.1|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion 	ENSMUST00000038874.5|Scai|ENSMUSG00000035236.11|suppressor of cancer cell invasion
mm10_v2_chr2_+_34772089_34772095	0.649993	ACAUUCA	ENSMUST00000028222.6|Hspa5|ENSMUSG00000026864.7|heat shock protein 5 	ENSMUST00000100171.2|Hspa5|ENSMUSG00000026864.7|heat shock protein 5
mm10_v2_chr7_-_27975368_27975368	0.649712	ACAUUCA	ENSMUST00000081618.7|Zfp780b|ENSMUSG00000063047.7|zinc finger protein 780B
mm10_v2_chr4_-_135873801_135873853	0.648965	ACAUUCA	ENSMUST00000030436.5|Pnrc2|ENSMUSG00000028675.6|proline-rich nuclear receptor coactivator 2
mm10_v2_chr16_+_45224315_45224346	0.64837	ACAUUCA	ENSMUST00000102802.3|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated 	ENSMUST00000063654.4|Btla|ENSMUSG00000052013.8|B and T lymphocyte associated
mm10_v2_chr10_+_52417532_52417580	0.647504	ACAUUCA	ENSMUST00000023830.8|Nus1|ENSMUSG00000023068.8|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
mm10_v2_chr5_+_88720855_88720876	0.644637	ACAUUCA	ENSMUST00000113229.1|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B 	ENSMUST00000006424.7|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B
mm10_v2_chr3_+_98013503_98013547	0.642156	ACAUUCA	ENSMUST00000079812.6|Notch2|ENSMUSG00000027878.10|notch 2
mm10_v2_chr9_+_113930934_113930987	0.642016	ACAUUCA	ENSMUST00000084885.5|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1 	ENSMUST00000009885.7|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1
mm10_v2_chr7_+_82867327_82867357	0.639167	ACAUUCA	ENSMUST00000082237.5|Mex3b|ENSMUSG00000057706.6|mex3 homolog B (C. elegans)
mm10_v2_chr4_+_116221633_116221661	0.638417	ACAUUCA	ENSMUST00000030464.7|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr6_+_141249161_141249269	0.638176	ACAUUCA	ENSMUST00000043259.7|Pde3a|ENSMUSG00000041741.8|phosphodiesterase 3A, cGMP inhibited
mm10_v2_chr3_+_135825648_135825664	0.632229	ACAUUCA	ENSMUST00000180196.1|Slc39a8|ENSMUSG00000053897.9|solute carrier family 39 (metal ion transporter), member 8
mm10_v2_chr5_-_107289561_107289637	0.630429	ACAUUCA	ENSMUST00000031224.8|Tgfbr3|ENSMUSG00000029287.8|transforming growth factor, beta receptor III
mm10_v2_chr17_-_80480435_80480462	0.630182	ACAUUCA	ENSMUST00000068714.5|Sos1|ENSMUSG00000024241.6|son of sevenless homolog 1 (Drosophila)
mm10_v2_chr2_+_177897096_177897096	0.629694	ACAUUCA	ENSMUST00000108935.1|Gm14327|ENSMUSG00000074521.3|predicted gene 14327
mm10_v2_chr12_-_45074112_45074306	0.6255	ACAUUCA	ENSMUST00000120531.1|Stxbp6|ENSMUSG00000046314.9|syntaxin binding protein 6 (amisyn) 	ENSMUST00000143376.1|Stxbp6|ENSMUSG00000046314.9|syntaxin binding protein 6 (amisyn)
mm10_v2_chr19_-_5349574_5349574	0.623677	ACAUUCA	ENSMUST00000025764.5|Cst6|ENSMUSG00000024846.5|cystatin E/M
mm10_v2_chr9_-_79793378_79793430	0.619072	ACAUUCA	ENSMUST00000034878.5|Tmem30a|ENSMUSG00000032328.6|transmembrane protein 30A
mm10_v2_chr13_-_8871696_8871749	0.612107	ACAUUCA	ENSMUST00000054251.6|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37 	ENSMUST00000176813.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr1_+_139422196_139422383	0.611649	ACAUUCA	ENSMUST00000039867.7|Zbtb41|ENSMUSG00000033964.7|zinc finger and BTB domain containing 41 homolog
mm10_v2_chr15_+_66577536_66577637	0.609212	ACAUUCA	ENSMUST00000048188.8|Phf20l1|ENSMUSG00000072501.4|PHD finger protein 20-like 1
mm10_v2_chr7_+_27862557_27862557	0.608276	ACAUUCA	ENSMUST00000053722.8|Zfp607|ENSMUSG00000020420.7|zinc finger proten 607
mm10_v2_chrX_+_68678541_68678554	0.607486	ACAUUCA	ENSMUST00000088546.5|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chr10_-_120979327_120979373	0.603629	ACAUUCA	ENSMUST00000119944.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3 	ENSMUST00000119093.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3
mm10_v2_chr1_-_106714217_106714330	0.602846	ACAUUCA	ENSMUST00000112751.1|Bcl2|ENSMUSG00000057329.6|B cell leukemia/lymphoma 2
mm10_v2_chr18_+_53862087_53862143	0.593979	ACAUUCA	ENSMUST00000069597.6|Csnk1g3|ENSMUSG00000073563.2|casein kinase 1, gamma 3
mm10_v2_chr9_-_81633828_81633828	0.591927	ACAUUCA	ENSMUST00000183482.1|Htr1b|ENSMUSG00000049511.5|5-hydroxytryptamine (serotonin) receptor 1B
mm10_v2_chr3_-_142881942_142882017	0.589972	ACAUUCA	ENSMUST00000043812.8|Pkn2|ENSMUSG00000004591.10|protein kinase N2
mm10_v2_chr2_+_138256530_138256615	0.58988	ACAUUCA	ENSMUST00000091556.5|Btbd3|ENSMUSG00000062098.5|BTB (POZ) domain containing 3
mm10_v2_chr2_+_126707319_126707411	0.587906	ACAUUCA	ENSMUST00000028841.7|Usp8|ENSMUSG00000027363.9|ubiquitin specific peptidase 8 	ENSMUST00000110416.2|Usp8|ENSMUSG00000027363.9|ubiquitin specific peptidase 8
mm10_v2_chr1_-_63114516_63114667	0.586264	ACAUUCA	ENSMUST00000097718.2|Ino80d|ENSMUSG00000040865.9|INO80 complex subunit D
mm10_v2_chr1_+_131910458_131910539	0.585787	ACAUUCA	ENSMUST00000062264.6|Nucks1|ENSMUSG00000026434.6|nuclear casein kinase and cyclin-dependent kinase substrate 1
mm10_v2_chr16_-_16560201_16560223	0.583345	ACAUUCA	ENSMUST00000162045.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000162124.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000161861.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4
mm10_v2_chr9_-_82975475_82975493	0.580193	ACAUUCA	ENSMUST00000034787.5|Phip|ENSMUSG00000032253.7|pleckstrin homology domain interacting protein
mm10_v2_chr13_-_95891905_95891929	0.579536	ACAUUCA	ENSMUST00000068603.6|Iqgap2|ENSMUSG00000021676.9|IQ motif containing GTPase activating protein 2
mm10_v2_chr14_-_20794009_20794098	0.575975	ACAUUCA	ENSMUST00000100837.3|Camk2g|ENSMUSG00000021820.10|calcium/calmodulin-dependent protein kinase II gamma 	ENSMUST00000080440.6|Camk2g|ENSMUSG00000021820.10|calcium/calmodulin-dependent protein kinase II gamma 	ENSMUST00000071816.6|Camk2g|ENSMUSG00000021820.10|calcium/calmodulin-dependent protein kinase II gamma
mm10_v2_chr4_+_59189240_59189257	0.574728	ACAUUCA	ENSMUST00000030074.7|Ugcg|ENSMUSG00000028381.8|UDP-glucose ceramide glucosyltransferase
mm10_v2_chr6_-_35539765_35539888	0.573159	ACAUUCA	ENSMUST00000031866.5|Mtpn|ENSMUSG00000029840.5|myotrophin
mm10_v2_chr14_-_69284982_69285112	0.572553	ACAUUCA	ENSMUST00000183882.1|Slc25a37|ENSMUSG00000034248.7|solute carrier family 25, member 37 	ENSMUST00000037064.4|Slc25a37|ENSMUSG00000034248.7|solute carrier family 25, member 37
mm10_v2_chr2_+_176670522_176670562	0.572305	ACAUUCA	ENSMUST00000121956.1|Gm14306|ENSMUSG00000078879.4|predicted gene 14306 	ENSMUST00000108985.2|Gm14306|ENSMUSG00000078879.4|predicted gene 14306
mm10_v2_chr14_+_17660956_17660963	0.566785	ACAUUCA	ENSMUST00000022303.7|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta 	ENSMUST00000091471.4|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta
mm10_v2_chr13_-_54055650_54055680	0.564985	ACAUUCA	ENSMUST00000021932.5|Drd1a|ENSMUSG00000021478.5|dopamine receptor D1A
mm10_v2_chr7_-_126396715_126396762	0.560483	ACAUUCA	ENSMUST00000075671.4|Nfatc2ip|ENSMUSG00000030722.7|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein
mm10_v2_chr18_+_73573044_73573044	0.560145	ACAUUCA	ENSMUST00000091852.4|Mex3c|ENSMUSG00000037253.8|mex3 homolog C (C. elegans)
mm10_v2_chr8_-_47713920_47713938	0.559204	ACAUUCA	ENSMUST00000038738.5|Cdkn2aip|ENSMUSG00000038069.5|CDKN2A interacting protein
mm10_v2_chr3_+_152346465_152346531	0.558942	ACAUUCA	ENSMUST00000026507.6|Usp33|ENSMUSG00000025437.9|ubiquitin specific peptidase 33 	ENSMUST00000117492.2|Usp33|ENSMUSG00000025437.9|ubiquitin specific peptidase 33
mm10_v2_chr16_-_96082389_96082481	0.556018	ACAUUCA	ENSMUST00000099502.2|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000023631.8|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000113829.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000153398.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1
mm10_v2_chr2_+_3284202_3284220	0.554788	ACAUUCA	ENSMUST00000081932.6|Nmt2|ENSMUSG00000026643.10|N-myristoyltransferase 2
mm10_v2_chr16_+_58408443_58408523	0.552385	ACAUUCA	ENSMUST00000046663.7|Dcbld2|ENSMUSG00000035107.7|discoidin, CUB and LCCL domain containing 2
mm10_v2_chr9_+_22188137_22188168	0.548622	ACAUUCA	ENSMUST00000178901.1|Zfp872|ENSMUSG00000074472.3|zinc finger protein 872
mm10_v2_chr3_-_127837419_127837505	0.544346	ACAUUCA	ENSMUST00000051737.6|Ap1ar|ENSMUSG00000074238.2|adaptor-related protein complex 1 associated regulatory protein
mm10_v2_chr18_+_10325148_10325222	0.542986	ACAUUCA	ENSMUST00000048977.8|Greb1l|ENSMUSG00000042942.9|growth regulation by estrogen in breast cancer-like
mm10_v2_chr17_-_42876417_42876431	0.541623	ACAUUCA	ENSMUST00000024709.7|Cd2ap|ENSMUSG00000061665.6|CD2-associated protein
mm10_v2_chr7_+_39517744_39517785	0.540856	ACAUUCA	ENSMUST00000108015.1|Zfp619|ENSMUSG00000068959.4|zinc finger protein 619
mm10_v2_chr3_-_80802789_80802840	0.538294	ACAUUCA	ENSMUST00000107745.1|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2) 	ENSMUST00000075316.4|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm10_v2_chrX_-_164980310_164980375	0.538007	ACAUUCA	ENSMUST00000004715.1|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2 	ENSMUST00000112248.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chr4_+_109280266_109280315	0.536587	ACAUUCA	ENSMUST00000102729.3|Eps15|ENSMUSG00000028552.7|epidermal growth factor receptor pathway substrate 15
mm10_v2_chr3_-_30969399_30969425	0.535672	ACAUUCA	ENSMUST00000177992.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000129817.2|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000168645.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000108255.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000064718.5|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000099163.3|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila)
mm10_v2_chr5_+_93093428_93093457	0.535505	ACAUUCA	ENSMUST00000074733.7|Sept11|ENSMUSG00000058013.8|septin 11
mm10_v2_chr12_+_111039334_111039400	0.534698	ACAUUCA	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr2_-_60125651_60125775	0.530995	ACAUUCA	ENSMUST00000112550.1|Baz2b|ENSMUSG00000026987.10|bromodomain adjacent to zinc finger domain, 2B
mm10_v2_chr5_+_103754154_103754188	0.530414	ACAUUCA	ENSMUST00000054979.3|Aff1|ENSMUSG00000029313.12|AF4/FMR2 family, member 1
mm10_v2_chr10_-_30842765_30842801	0.527554	ACAUUCA	ENSMUST00000019924.8|Hey2|ENSMUSG00000019789.8|hairy/enhancer-of-split related with YRPW motif 2
mm10_v2_chr2_-_175800961_175801093	0.525518	ACAUUCA	ENSMUST00000123863.1|Gm14288|ENSMUSG00000078889.5|predicted gene 14288 	ENSMUST00000109020.2|Gm14288|ENSMUSG00000078889.5|predicted gene 14288
mm10_v2_chr2_-_34755229_34755252	0.524701	ACAUUCA	ENSMUST00000102800.1|Gapvd1|ENSMUSG00000026867.12|GTPase activating protein and VPS9 domains 1
mm10_v2_chr8_+_107293463_107293483	0.524264	ACAUUCA	ENSMUST00000169453.1|Nfat5|ENSMUSG00000003847.10|nuclear factor of activated T cells 5
mm10_v2_chr6_-_113195380_113195387	0.521438	ACAUUCA	ENSMUST00000162280.1|Lhfpl4|ENSMUSG00000042873.10|lipoma HMGIC fusion partner-like protein 4
mm10_v2_chr18_-_52529847_52529890	0.520886	ACAUUCA	ENSMUST00000171470.1|Lox|ENSMUSG00000024529.7|lysyl oxidase
mm10_v2_chr12_+_18514738_18514738	0.515612	ACAUUCA	ENSMUST00000177778.1|5730507C01Rik|ENSMUSG00000073197.2|RIKEN cDNA 5730507C01 gene 	ENSMUST00000063216.4|5730507C01Rik|ENSMUSG00000073197.2|RIKEN cDNA 5730507C01 gene
mm10_v2_chr3_+_51415986_51416044	0.515294	ACAUUCA	ENSMUST00000029303.7|Naa15|ENSMUSG00000063273.6|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
mm10_v2_chrX_-_41911877_41911912	0.514423	ACAUUCA	ENSMUST00000047037.8|Thoc2|ENSMUSG00000037475.9|THO complex 2
mm10_v2_chr8_+_79639618_79639730	0.512693	ACAUUCA	ENSMUST00000173078.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4 	ENSMUST00000173286.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4
mm10_v2_chr2_-_150451486_150451486	0.511848	ACAUUCA	ENSMUST00000109916.1|Zfp442|ENSMUSG00000068130.5|zinc finger protein 442
mm10_v2_chr18_+_68300351_68300422	0.511577	ACAUUCA	ENSMUST00000009679.4|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000131075.1|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000025427.7|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase 	ENSMUST00000139111.1|Rnmt|ENSMUSG00000009535.7|RNA (guanine-7-) methyltransferase
mm10_v2_chrX_+_77511002_77511100	0.507459	ACAUUCA	ENSMUST00000088217.5|Tbl1x|ENSMUSG00000025246.7|transducin (beta)-like 1 X-linked
mm10_v2_chr17_-_10319324_10319380	0.503739	ACAUUCA	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr12_+_32953874_32953891	0.502504	ACAUUCA	ENSMUST00000076698.5|Sypl|ENSMUSG00000020570.8|synaptophysin-like protein
mm10_v2_chr12_-_84218835_84218890	0.502427	ACAUUCA	ENSMUST00000046266.6|Elmsan1|ENSMUSG00000042507.8|ELM2 and Myb/SANT-like domain containing 1
mm10_v2_chr2_+_52857844_52857868	0.501646	ACAUUCA	ENSMUST00000090952.4|Fmnl2|ENSMUSG00000036053.10|formin-like 2 	ENSMUST00000049483.6|Fmnl2|ENSMUSG00000036053.10|formin-like 2 	ENSMUST00000050719.6|Fmnl2|ENSMUSG00000036053.10|formin-like 2
mm10_v2_chrX_-_103981242_103981287	0.494975	ACAUUCA	ENSMUST00000121153.1|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting 	ENSMUST00000070705.4|Rlim|ENSMUSG00000056537.5|ring finger protein, LIM domain interacting
mm10_v2_chr3_+_58415689_58415689	0.494297	ACAUUCA	ENSMUST00000099090.2|Tsc22d2|ENSMUSG00000027806.5|TSC22 domain family, member 2
mm10_v2_chr6_-_30304513_30304570	0.491227	ACAUUCA	ENSMUST00000094543.2|Ube2h|ENSMUSG00000039159.10|ubiquitin-conjugating enzyme E2H 	ENSMUST00000102993.3|Ube2h|ENSMUSG00000039159.10|ubiquitin-conjugating enzyme E2H
mm10_v2_chr12_-_75735729_75735736	0.488698	ACAUUCA	ENSMUST00000021450.4|Sgpp1|ENSMUSG00000021054.5|sphingosine-1-phosphate phosphatase 1
mm10_v2_chr3_+_103914560_103914605	0.48843	ACAUUCA	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr4_-_70534904_70534987	0.487741	ACAUUCA	ENSMUST00000107359.2|Megf9|ENSMUSG00000039270.3|multiple EGF-like-domains 9
mm10_v2_chr2_+_128818104_128818135	0.48628	ACAUUCA	ENSMUST00000110325.1|Tmem87b|ENSMUSG00000014353.8|transmembrane protein 87B
mm10_v2_chr14_-_72709986_72710027	0.48198	ACAUUCA	ENSMUST00000089017.5|Fndc3a|ENSMUSG00000033487.8|fibronectin type III domain containing 3A
mm10_v2_chr19_-_59943647_59943678	0.480296	ACAUUCA	ENSMUST00000171986.1|Rab11fip2|ENSMUSG00000040022.8|RAB11 family interacting protein 2 (class I)
mm10_v2_chr1_-_119837613_119837673	0.47983	ACAUUCA	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr1_-_181842334_181842401	0.479645	ACAUUCA	ENSMUST00000005003.6|Lbr|ENSMUSG00000004880.6|lamin B receptor
mm10_v2_chr13_+_9276477_9276620	0.473261	ACAUUCA	ENSMUST00000174552.1|Dip2c|ENSMUSG00000048264.9|DIP2 disco-interacting protein 2 homolog C (Drosophila)
mm10_v2_chr6_+_87042838_87042918	0.472283	ACAUUCA	ENSMUST00000113658.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000113657.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000113655.1|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1 	ENSMUST00000032057.7|Gfpt1|ENSMUSG00000029992.8|glutamine fructose-6-phosphate transaminase 1
mm10_v2_chr6_+_145746739_145746767	0.467501	ACAUUCA	ENSMUST00000111704.1|Rassf8|ENSMUSG00000030259.6|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
mm10_v2_chr5_+_63649335_63649451	0.463178	ACAUUCA	ENSMUST00000159584.1|3110047P20Rik|ENSMUSG00000090061.3|RIKEN cDNA 3110047P20 gene
mm10_v2_chr6_+_100833606_100833663	0.462933	ACAUUCA	ENSMUST00000063854.4|Ppp4r2|ENSMUSG00000052144.6|protein phosphatase 4, regulatory subunit 2
mm10_v2_chr3_+_14578609_14578687	0.458425	ACAUUCA	ENSMUST00000029069.6|E2f5|ENSMUSG00000027552.8|E2F transcription factor 5 	ENSMUST00000165922.2|E2f5|ENSMUSG00000027552.8|E2F transcription factor 5
mm10_v2_chr4_+_21848039_21848077	0.455961	ACAUUCA	ENSMUST00000098238.2|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18 	ENSMUST00000108229.1|Sfrs18|ENSMUSG00000028248.9|serine/arginine-rich splicing factor 18
mm10_v2_chr14_-_19977249_19977253	0.454978	ACAUUCA	ENSMUST00000160013.1|Gng2|ENSMUSG00000043004.7|guanine nucleotide binding protein (G protein), gamma 2
mm10_v2_chr11_-_86544754_86544805	0.451996	ACAUUCA	ENSMUST00000138810.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000058286.2|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000154617.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1
mm10_v2_chr6_-_71440623_71440645	0.448667	ACAUUCA	ENSMUST00000002292.8|Rmnd5a|ENSMUSG00000002222.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm10_v2_chr3_+_86224665_86224717	0.447464	ACAUUCA	ENSMUST00000107635.1|Lrba|ENSMUSG00000028080.10|LPS-responsive beige-like anchor
mm10_v2_chr13_+_35659856_35659870	0.447384	ACAUUCA	ENSMUST00000075220.6|Cdyl|ENSMUSG00000059288.7|chromodomain protein, Y chromosome-like
mm10_v2_chr3_-_104511812_104511933	0.445245	ACAUUCA	ENSMUST00000046316.6|Lrig2|ENSMUSG00000032913.9|leucine-rich repeats and immunoglobulin-like domains 2
mm10_v2_chr6_+_147091379_147091528	0.44396	ACAUUCA	ENSMUST00000036003.7|Klhl42|ENSMUSG00000040102.9|kelch-like 42
mm10_v2_chr1_-_64121456_64121491	0.442133	ACAUUCA	ENSMUST00000142009.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous) 	ENSMUST00000114086.1|Klf7|ENSMUSG00000025959.7|Kruppel-like factor 7 (ubiquitous)
mm10_v2_chr18_-_67449083_67449205	0.434763	ACAUUCA	ENSMUST00000025408.8|Afg3l2|ENSMUSG00000024527.9|AFG3(ATPase family gene 3)-like 2 (yeast)
mm10_v2_chr15_-_51991679_51991760	0.434232	ACAUUCA	ENSMUST00000022927.9|Rad21|ENSMUSG00000022314.9|RAD21 homolog (S. pombe)
mm10_v2_chr14_+_62837679_62837726	0.431982	ACAUUCA	ENSMUST00000014691.8|Wdfy2|ENSMUSG00000014547.9|WD repeat and FYVE domain containing 2
mm10_v2_chr1_+_59764264_59764286	0.429471	ACAUUCA	ENSMUST00000087435.5|Bmpr2|ENSMUSG00000067336.5|bone morphogenetic protein receptor, type II (serine/threonine kinase)
mm10_v2_chr15_+_5143861_5143896	0.428443	ACAUUCA	ENSMUST00000051186.8|Prkaa1|ENSMUSG00000050697.8|protein kinase, AMP-activated, alpha 1 catalytic subunit
mm10_v2_chr3_-_19163011_19163085	0.423947	ACAUUCA	ENSMUST00000029125.8|Armc1|ENSMUSG00000027599.8|armadillo repeat containing 1
mm10_v2_chr11_-_79254663_79254685	0.423661	ACAUUCA	ENSMUST00000017821.5|Wsb1|ENSMUSG00000017677.5|WD repeat and SOCS box-containing 1
mm10_v2_chr3_-_119783262_119783388	0.423582	ACAUUCA	ENSMUST00000029780.7|Ptbp2|ENSMUSG00000028134.7|polypyrimidine tract binding protein 2
mm10_v2_chr11_+_60417238_60417301	0.421836	ACAUUCA	ENSMUST00000070681.6|Gid4|ENSMUSG00000018415.8|GID complex subunit 4, VID24 homolog (S. cerevisiae)
mm10_v2_chr13_-_9764371_9764423	0.414679	ACAUUCA	ENSMUST00000146059.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11 	ENSMUST00000110637.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11
mm10_v2_chr11_+_29172890_29172925	0.41311	ACAUUCA	ENSMUST00000102856.2|Smek2|ENSMUSG00000020463.9|SMEK homolog 2, suppressor of mek1 (Dictyostelium) 	ENSMUST00000020755.5|Smek2|ENSMUSG00000020463.9|SMEK homolog 2, suppressor of mek1 (Dictyostelium)
mm10_v2_chr19_-_23448322_23448350	0.410649	ACAUUCA	ENSMUST00000036069.6|Mamdc2|ENSMUSG00000033207.6|MAM domain containing 2
mm10_v2_chr2_+_145785980_145786152	0.4075	ACAUUCA	ENSMUST00000110005.1|Rin2|ENSMUSG00000001768.9|Ras and Rab interactor 2 	ENSMUST00000094480.4|Rin2|ENSMUSG00000001768.9|Ras and Rab interactor 2
mm10_v2_chr7_-_41560795_41560836	0.402729	ACAUUCA	ENSMUST00000164677.1|Gm6871|ENSMUSG00000090744.1|predicted gene 6871 	ENSMUST00000073410.5|Gm6871|ENSMUSG00000090744.1|predicted gene 6871
mm10_v2_chr10_+_128225830_128225845	0.4017	ACAUUCA	ENSMUST00000026455.7|Mip|ENSMUSG00000025389.7|major intrinsic protein of eye lens fiber
mm10_v2_chr9_+_65908967_65909020	0.400598	ACAUUCA	ENSMUST00000034949.3|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1 	ENSMUST00000154589.1|Csnk1g1|ENSMUSG00000032384.9|casein kinase 1, gamma 1
mm10_v2_chr10_+_70097102_70097211	0.399954	ACAUUCA	ENSMUST00000147545.1|Ccdc6|ENSMUSG00000048701.7|coiled-coil domain containing 6
mm10_v2_chr11_-_87074055_87074071	0.399177	ACAUUCA	ENSMUST00000020804.7|Gdpd1|ENSMUSG00000061666.6|glycerophosphodiester phosphodiesterase domain containing 1
mm10_v2_chr8_+_88199194_88199224	0.398505	ACAUUCA	ENSMUST00000119033.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000066748.3|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000118952.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5
mm10_v2_chr12_-_59219725_59219776	0.393081	ACAUUCA	ENSMUST00000043204.7|Fbxo33|ENSMUSG00000035329.7|F-box protein 33
mm10_v2_chr1_-_13372434_13372457	0.391921	ACAUUCA	ENSMUST00000081713.4|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr6_+_17463749_17463809	0.391101	ACAUUCA	ENSMUST00000115443.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr6_-_120038647_120038699	0.390695	ACAUUCA	ENSMUST00000088646.5|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000177761.1|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000088644.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1 	ENSMUST00000060043.6|Wnk1|ENSMUSG00000045962.10|WNK lysine deficient protein kinase 1
mm10_v2_chr9_-_42472198_42472265	0.388073	ACAUUCA	ENSMUST00000128959.1|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like 	ENSMUST00000066148.5|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like 	ENSMUST00000138506.1|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like
mm10_v2_chr12_+_3426857_3426931	0.385631	ACAUUCA	ENSMUST00000111215.3|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000092003.5|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000144247.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000153102.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila)
mm10_v2_chr5_-_67847400_67847439	0.385472	ACAUUCA	ENSMUST00000113652.1|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENSMUST00000113651.1|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENSMUST00000037380.8|Atp8a1|ENSMUSG00000037685.9|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
mm10_v2_chr6_+_54816906_54816920	0.384741	ACAUUCA	ENSMUST00000079869.6|Znrf2|ENSMUSG00000058446.8|zinc and ring finger 2
mm10_v2_chr7_+_27689340_27689340	0.38375	ACAUUCA	ENSMUST00000120004.1|C030039L03Rik|ENSMUSG00000057093.8|RIKEN cDNA C030039L03 gene
mm10_v2_chr13_-_67114028_67114028	0.383444	ACAUUCA	ENSMUST00000091526.3|Rslcan18|ENSMUSG00000074824.2|regulator of sex-limitation candidate 18
mm10_v2_chr2_+_48814109_48814173	0.381028	ACAUUCA	ENSMUST00000063886.3|Acvr2a|ENSMUSG00000052155.5|activin receptor IIA
mm10_v2_chr5_+_130171798_130171879	0.377642	ACAUUCA	ENSMUST00000119797.1|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1 	ENSMUST00000148264.1|Rabgef1|ENSMUSG00000025340.8|RAB guanine nucleotide exchange factor (GEF) 1
mm10_v2_chr17_+_53566971_53567023	0.375719	ACAUUCA	ENSMUST00000000724.8|Kat2b|ENSMUSG00000000708.8|K(lysine) acetyltransferase 2B
mm10_v2_chr11_-_23895208_23895280	0.374723	ACAUUCA	ENSMUST00000102863.2|Papolg|ENSMUSG00000020273.7|poly(A) polymerase gamma 	ENSMUST00000020513.3|Papolg|ENSMUSG00000020273.7|poly(A) polymerase gamma
mm10_v2_chr7_-_98656530_98656600	0.374091	ACAUUCA	ENSMUST00000038359.4|2210018M11Rik|ENSMUSG00000035401.8|RIKEN cDNA 2210018M11 gene
mm10_v2_chr6_-_39725448_39725478	0.372536	ACAUUCA	ENSMUST00000002487.8|Braf|ENSMUSG00000002413.9|Braf transforming gene
mm10_v2_chr2_+_57237651_57237729	0.371729	ACAUUCA	ENSMUST00000169687.1|Gpd2|ENSMUSG00000026827.6|glycerol phosphate dehydrogenase 2, mitochondrial
mm10_v2_chr2_+_176521056_176521056	0.370755	ACAUUCA	ENSMUST00000108997.2|Gm14431|ENSMUSG00000095199.1|predicted gene 14431 	ENSMUST00000178443.1|Gm14431|ENSMUSG00000095199.1|predicted gene 14431
mm10_v2_chr2_-_177324307_177324307	0.368164	ACAUUCA	ENSMUST00000108959.2|Gm14412|ENSMUSG00000078868.3|predicted gene 14412
mm10_v2_chr10_+_123264076_123264125	0.367894	ACAUUCA	ENSMUST00000050756.7|Fam19a2|ENSMUSG00000044071.7|family with sequence similarity 19, member A2
mm10_v2_chr6_+_45060036_45060067	0.364532	ACAUUCA	ENSMUST00000114641.1|Cntnap2|ENSMUSG00000039419.10|contactin associated protein-like 2
mm10_v2_chrX_-_8145713_8145880	0.363812	ACAUUCA	ENSMUST00000115615.2|Rbm3|ENSMUSG00000031167.10|RNA binding motif protein 3 	ENSMUST00000115616.1|Rbm3|ENSMUSG00000031167.10|RNA binding motif protein 3 	ENSMUST00000115621.2|Rbm3|ENSMUSG00000031167.10|RNA binding motif protein 3
mm10_v2_chr6_+_97807014_97807067	0.357057	ACAUUCA	ENSMUST00000043637.7|Mitf|ENSMUSG00000035158.9|microphthalmia-associated transcription factor
mm10_v2_chr2_-_119477613_119477705	0.356403	ACAUUCA	ENSMUST00000110808.1|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae) 	ENSMUST00000049920.7|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae)
mm10_v2_chr5_+_86804214_86804276	0.352466	ACAUUCA	ENSMUST00000119339.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1 	ENSMUST00000120498.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1
mm10_v2_chr17_-_85688252_85688275	0.351939	ACAUUCA	ENSMUST00000024947.7|Six2|ENSMUSG00000024134.10|sine oculis-related homeobox 2 	ENSMUST00000163568.2|Six2|ENSMUSG00000024134.10|sine oculis-related homeobox 2
mm10_v2_chr11_-_40755201_40755311	0.350623	ACAUUCA	ENSMUST00000020576.7|Ccng1|ENSMUSG00000020326.7|cyclin G1
mm10_v2_chr13_-_17944151_17944239	0.347605	ACAUUCA	ENSMUST00000009003.7|Rala|ENSMUSG00000008859.7|v-ral simian leukemia viral oncogene homolog A (ras related)
mm10_v2_chr16_-_44139196_44139305	0.347385	ACAUUCA	ENSMUST00000063661.6|Atp6v1a|ENSMUSG00000052459.7|ATPase, H+ transporting, lysosomal V1 subunit A 	ENSMUST00000114666.2|Atp6v1a|ENSMUSG00000052459.7|ATPase, H+ transporting, lysosomal V1 subunit A
mm10_v2_chr1_-_178337774_178337797	0.342959	ACAUUCA	ENSMUST00000037748.7|Hnrnpu|ENSMUSG00000039630.8|heterogeneous nuclear ribonucleoprotein U
mm10_v2_chr5_-_145140238_145140281	0.342438	ACAUUCA	ENSMUST00000031627.8|Pdap1|ENSMUSG00000029623.8|PDGFA associated protein 1
mm10_v2_chr2_-_136387929_136387985	0.342255	ACAUUCA	ENSMUST00000035264.2|Pak7|ENSMUSG00000039913.6|p21 protein (Cdc42/Rac)-activated kinase 7 	ENSMUST00000077200.3|Pak7|ENSMUSG00000039913.6|p21 protein (Cdc42/Rac)-activated kinase 7
mm10_v2_chr2_-_105904484_105904564	0.341975	ACAUUCA	ENSMUST00000122965.1|Elp4|ENSMUSG00000027167.5|elongation protein 4 homolog (S. cerevisiae)
mm10_v2_chr11_-_107131922_107131954	0.341764	ACAUUCA	ENSMUST00000057892.8|Bptf|ENSMUSG00000040481.10|bromodomain PHD finger transcription factor
mm10_v2_chr1_-_17097839_17097889	0.33787	ACAUUCA	ENSMUST00000038382.4|Jph1|ENSMUSG00000042686.4|junctophilin 1
mm10_v2_chr5_-_96161990_96162097	0.337183	ACAUUCA	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr16_+_38902305_38902316	0.336127	ACAUUCA	ENSMUST00000023478.7|Igsf11|ENSMUSG00000022790.7|immunoglobulin superfamily, member 11
mm10_v2_chr6_-_24664960_24665038	0.335801	ACAUUCA	ENSMUST00000041737.7|Wasl|ENSMUSG00000029684.8|Wiskott-Aldrich syndrome-like (human) 	ENSMUST00000031695.8|Wasl|ENSMUSG00000029684.8|Wiskott-Aldrich syndrome-like (human)
mm10_v2_chr1_+_93803945_93803998	0.335463	ACAUUCA	ENSMUST00000027505.6|Ing5|ENSMUSG00000026283.7|inhibitor of growth family, member 5
mm10_v2_chr16_+_24393350_24393428	0.332313	ACAUUCA	ENSMUST00000038053.6|Lpp|ENSMUSG00000033306.8|LIM domain containing preferred translocation partner in lipoma
mm10_v2_chr1_-_54557595_54557698	0.331606	ACAUUCA	ENSMUST00000097739.3|Pgap1|ENSMUSG00000073678.3|post-GPI attachment to proteins 1
mm10_v2_chr1_-_186705980_186705999	0.330781	ACAUUCA	ENSMUST00000045288.8|Tgfb2|ENSMUSG00000039239.9|transforming growth factor, beta 2
mm10_v2_chr4_-_134287215_134287258	0.329215	ACAUUCA	ENSMUST00000145006.1|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000105877.2|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000127857.1|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like 	ENSMUST00000105876.2|Pdik1l|ENSMUSG00000050890.9|PDLIM1 interacting kinase 1 like
mm10_v2_chr2_+_158409842_158409862	0.328865	ACAUUCA	ENSMUST00000109486.2|Ralgapb|ENSMUSG00000027652.9|Ral GTPase activating protein, beta subunit (non-catalytic) 	ENSMUST00000046274.5|Ralgapb|ENSMUSG00000027652.9|Ral GTPase activating protein, beta subunit (non-catalytic)
mm10_v2_chr3_+_114904062_114904142	0.32874	ACAUUCA	ENSMUST00000081752.6|Olfm3|ENSMUSG00000027965.9|olfactomedin 3
mm10_v2_chr1_+_130717320_130717333	0.326666	ACAUUCA	ENSMUST00000049813.4|Yod1|ENSMUSG00000046404.4|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)
mm10_v2_chr6_-_149101674_149101686	0.326073	ACAUUCA	ENSMUST00000111557.1|Dennd5b|ENSMUSG00000030313.9|DENN/MADD domain containing 5B
mm10_v2_chr2_-_39065438_39065503	0.323485	ACAUUCA	ENSMUST00000112850.2|Golga1|ENSMUSG00000026754.10|golgi autoantigen, golgin subfamily a, 1
mm10_v2_chr19_-_32061438_32061469	0.322928	ACAUUCA	ENSMUST00000096119.4|Asah2|ENSMUSG00000024887.9|N-acylsphingosine amidohydrolase 2
mm10_v2_chr3_+_67374116_67374154	0.322031	ACAUUCA	ENSMUST00000061322.8|Mlf1|ENSMUSG00000048416.9|myeloid leukemia factor 1
mm10_v2_chr9_+_32696005_32696121	0.319068	ACAUUCA	ENSMUST00000034534.6|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000050797.7|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000184887.1|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain
mm10_v2_chr3_-_89960562_89960629	0.31841	ACAUUCA	ENSMUST00000069805.7|Atp8b2|ENSMUSG00000060671.6|ATPase, class I, type 8B, member 2
mm10_v2_chr7_-_98309471_98309538	0.313812	ACAUUCA	ENSMUST00000033020.7|Acer3|ENSMUSG00000030760.8|alkaline ceramidase 3
mm10_v2_chr18_+_61555258_61555290	0.313015	ACAUUCA	ENSMUST00000165123.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr4_-_149307506_149307703	0.309692	ACAUUCA	ENSMUST00000055647.8|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B 	ENSMUST00000030806.5|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B 	ENSMUST00000060537.6|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B
mm10_v2_chr19_+_40831248_40831292	0.307155	ACAUUCA	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr2_-_73892530_73892555	0.303677	ACAUUCA	ENSMUST00000136958.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112010.2|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000128531.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2 	ENSMUST00000112017.1|Atf2|ENSMUSG00000027104.12|activating transcription factor 2
mm10_v2_chr2_+_153291404_153291459	0.303218	ACAUUCA	ENSMUST00000028977.6|Kif3b|ENSMUSG00000027475.9|kinesin family member 3B
mm10_v2_chr10_-_13324160_13324242	0.302623	ACAUUCA	ENSMUST00000105545.4|Phactr2|ENSMUSG00000062866.9|phosphatase and actin regulator 2
mm10_v2_chr2_+_48949495_48949522	0.301283	ACAUUCA	ENSMUST00000112745.1|Mbd5|ENSMUSG00000036792.6|methyl-CpG binding domain protein 5
mm10_v2_chrX_+_101640056_101640108	0.29966	ACAUUCA	ENSMUST00000119299.1|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) 	ENSMUST00000044475.4|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm10_v2_chr1_-_21961581_21961581	0.29932	ACAUUCA	ENSMUST00000029667.6|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173058.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5 	ENSMUST00000173404.1|Kcnq5|ENSMUSG00000028033.10|potassium voltage-gated channel, subfamily Q, member 5
mm10_v2_chr11_-_97280626_97280650	0.297617	ACAUUCA	ENSMUST00000001480.7|Npepps|ENSMUSG00000001441.7|aminopeptidase puromycin sensitive
mm10_v2_chr2_+_71786923_71786978	0.297234	ACAUUCA	ENSMUST00000112101.1|Itga6|ENSMUSG00000027111.9|integrin alpha 6 	ENSMUST00000028522.3|Itga6|ENSMUSG00000027111.9|integrin alpha 6
mm10_v2_chr9_+_121366958_121367042	0.296366	ACAUUCA	ENSMUST00000045903.6|Trak1|ENSMUSG00000032536.9|trafficking protein, kinesin binding 1
mm10_v2_chr4_-_123750236_123750345	0.293344	ACAUUCA	ENSMUST00000102636.3|Akirin1|ENSMUSG00000023075.9|akirin 1
mm10_v2_chr16_-_59555752_59555752	0.292759	ACAUUCA	ENSMUST00000179383.1|Crybg3|ENSMUSG00000022723.9|beta-gamma crystallin domain containing 3 	ENSMUST00000044604.8|Crybg3|ENSMUSG00000022723.9|beta-gamma crystallin domain containing 3
mm10_v2_chr5_-_146795002_146795009	0.287296	ACAUUCA	ENSMUST00000085614.5|Usp12|ENSMUSG00000029640.11|ubiquitin specific peptidase 12
mm10_v2_chr11_-_6475992_6476102	0.287254	ACAUUCA	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr7_-_81829431_81829514	0.280485	ACAUUCA	ENSMUST00000026093.7|Btbd1|ENSMUSG00000025103.7|BTB (POZ) domain containing 1
mm10_v2_chr11_-_28584260_28584324	0.280373	ACAUUCA	ENSMUST00000093253.3|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A 	ENSMUST00000109502.2|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A 	ENSMUST00000042534.8|Ccdc85a|ENSMUSG00000032878.10|coiled-coil domain containing 85A
mm10_v2_chr2_+_177762898_177762898	0.280218	ACAUUCA	ENSMUST00000119838.2|Gm14322|ENSMUSG00000078864.4|predicted gene 14322
mm10_v2_chr15_-_88734217_88734240	0.275655	ACAUUCA	ENSMUST00000088911.3|Brd1|ENSMUSG00000022387.10|bromodomain containing 1 	ENSMUST00000109381.1|Brd1|ENSMUSG00000022387.10|bromodomain containing 1
mm10_v2_chr10_-_7956223_7956271	0.275011	ACAUUCA	ENSMUST00000146444.1|Tab2|ENSMUSG00000015755.10|TGF-beta activated kinase 1/MAP3K7 binding protein 2
mm10_v2_chr6_-_129275360_129275376	0.266279	ACAUUCA	ENSMUST00000032259.3|Cd69|ENSMUSG00000030156.3|CD69 antigen
mm10_v2_chr1_-_54926311_54926402	0.26565	ACAUUCA	ENSMUST00000179030.1|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44 	ENSMUST00000044359.9|Ankrd44|ENSMUSG00000052331.8|ankyrin repeat domain 44
mm10_v2_chr17_+_6106880_6106907	0.265264	ACAUUCA	ENSMUST00000149756.1|Tulp4|ENSMUSG00000034377.4|tubby like protein 4
mm10_v2_chr16_+_56477838_56477860	0.26465	ACAUUCA	ENSMUST00000048471.7|Abi3bp|ENSMUSG00000035258.8|ABI gene family, member 3 (NESH) binding protein 	ENSMUST00000096013.3|Abi3bp|ENSMUSG00000035258.8|ABI gene family, member 3 (NESH) binding protein 	ENSMUST00000096012.3|Abi3bp|ENSMUSG00000035258.8|ABI gene family, member 3 (NESH) binding protein 	ENSMUST00000171000.1|Abi3bp|ENSMUSG00000035258.8|ABI gene family, member 3 (NESH) binding protein
mm10_v2_chr4_+_53713998_53714199	0.263132	ACAUUCA	ENSMUST00000128667.1|Fktn|ENSMUSG00000028414.10|fukutin
mm10_v2_chr4_-_83324239_83324269	0.263018	ACAUUCA	ENSMUST00000048274.4|Ttc39b|ENSMUSG00000038172.8|tetratricopeptide repeat domain 39B 	ENSMUST00000102823.3|Ttc39b|ENSMUSG00000038172.8|tetratricopeptide repeat domain 39B
mm10_v2_chr14_-_37135126_37135141	0.260941	ACAUUCA	ENSMUST00000042564.9|Ghitm|ENSMUSG00000041028.9|growth hormone inducible transmembrane protein
mm10_v2_chr5_-_73256555_73256636	0.260941	ACAUUCA	ENSMUST00000171179.1|Fryl|ENSMUSG00000090491.1|furry homolog-like (Drosophila) 	ENSMUST00000101127.5|Fryl|ENSMUSG00000070733.7|furry homolog-like (Drosophila)
mm10_v2_chr6_-_101377897_101378016	0.260135	ACAUUCA	ENSMUST00000075994.6|Pdzrn3|ENSMUSG00000035357.10|PDZ domain containing RING finger 3
mm10_v2_chr6_-_92706145_92706234	0.258656	ACAUUCA	ENSMUST00000032093.5|Prickle2|ENSMUSG00000030020.7|prickle homolog 2 (Drosophila)
mm10_v2_chr12_-_87200200_87200284	0.258179	ACAUUCA	ENSMUST00000037418.5|Tmed8|ENSMUSG00000034111.5|transmembrane emp24 domain containing 8
mm10_v2_chr9_-_113708209_113708259	0.256005	ACAUUCA	ENSMUST00000111861.3|Pdcd6ip|ENSMUSG00000032504.9|programmed cell death 6 interacting protein 	ENSMUST00000035086.6|Pdcd6ip|ENSMUSG00000032504.9|programmed cell death 6 interacting protein
mm10_v2_chr16_+_35983307_35983395	0.255899	ACAUUCA	ENSMUST00000004054.6|Kpna1|ENSMUSG00000022905.6|karyopherin (importin) alpha 1
mm10_v2_chr17_+_25188380_25188418	0.255431	ACAUUCA	ENSMUST00000039734.5|Unkl|ENSMUSG00000015127.8|unkempt-like (Drosophila)
mm10_v2_chr5_-_92042999_92043051	0.253333	ACAUUCA	ENSMUST00000069937.4|Cdkl2|ENSMUSG00000029403.8|cyclin-dependent kinase-like 2 (CDC2-related kinase) 	ENSMUST00000086978.5|Cdkl2|ENSMUSG00000029403.8|cyclin-dependent kinase-like 2 (CDC2-related kinase)
mm10_v2_chr13_+_74121435_74121515	0.253291	ACAUUCA	ENSMUST00000036208.6|Slc9a3|ENSMUSG00000036123.6|solute carrier family 9 (sodium/hydrogen exchanger), member 3
mm10_v2_chr5_-_76304474_76304548	0.253107	ACAUUCA	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chr2_+_122028544_122028563	0.250784	ACAUUCA	ENSMUST00000028668.7|Eif3j1|ENSMUSG00000027236.8|eukaryotic translation initiation factor 3, subunit J1
mm10_v2_chr12_+_4592992_4593087	0.250371	ACAUUCA	ENSMUST00000062580.7|Itsn2|ENSMUSG00000020640.9|intersectin 2
mm10_v2_chr10_-_94944578_94944578	0.248823	ACAUUCA	ENSMUST00000099337.3|Plxnc1|ENSMUSG00000074785.4|plexin C1
mm10_v2_chr9_-_65908676_65908798	0.248816	ACAUUCA	ENSMUST00000119245.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4 	ENSMUST00000134338.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4 	ENSMUST00000179395.1|Trip4|ENSMUSG00000032386.9|thyroid hormone receptor interactor 4
mm10_v2_chr1_+_184034381_184034437	0.247184	ACAUUCA	ENSMUST00000048655.7|Dusp10|ENSMUSG00000039384.8|dual specificity phosphatase 10
mm10_v2_chr8_+_60632856_60632905	0.245423	ACAUUCA	ENSMUST00000160719.1|Mfap3l|ENSMUSG00000031647.4|microfibrillar-associated protein 3-like
mm10_v2_chr1_-_77515048_77515102	0.241375	ACAUUCA	ENSMUST00000027451.6|Epha4|ENSMUSG00000026235.8|Eph receptor A4
mm10_v2_chr5_-_66173051_66173117	0.240511	ACAUUCA	ENSMUST00000113726.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47
mm10_v2_chr6_-_143947092_143947111	0.240198	ACAUUCA	ENSMUST00000144289.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000111748.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr4_+_123904832_123904851	0.24017	ACAUUCA	ENSMUST00000030400.7|Mycbp|ENSMUSG00000028647.7|c-myc binding protein
mm10_v2_chr12_-_31499541_31499616	0.238772	ACAUUCA	ENSMUST00000101499.3|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000064240.6|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000085487.5|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1
mm10_v2_chr13_-_115101909_115101984	0.23375	ACAUUCA	ENSMUST00000061673.7|Itga1|ENSMUSG00000042284.9|integrin alpha 1
mm10_v2_chr10_+_128092771_128092819	0.2331	ACAUUCA	ENSMUST00000170054.2|Baz2a|ENSMUSG00000040054.9|bromodomain adjacent to zinc finger domain, 2A 	ENSMUST00000045621.8|Baz2a|ENSMUSG00000040054.9|bromodomain adjacent to zinc finger domain, 2A
mm10_v2_chr4_+_130663321_130663412	0.232682	ACAUUCA	ENSMUST00000030315.6|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000105992.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000105991.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000143277.1|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000097864.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila) 	ENSMUST00000097862.2|Pum1|ENSMUSG00000028580.9|pumilio 1 (Drosophila)
mm10_v2_chr2_-_33468493_33468572	0.231375	ACAUUCA	ENSMUST00000113156.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000028125.5|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000126442.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43
mm10_v2_chr11_-_78697370_78697475	0.230973	ACAUUCA	ENSMUST00000142739.1|Nlk|ENSMUSG00000017376.9|nemo like kinase
mm10_v2_chr18_-_67641329_67641349	0.229834	ACAUUCA	ENSMUST00000097542.2|Cep76|ENSMUSG00000073542.2|centrosomal protein 76
mm10_v2_chr12_+_84996309_84996419	0.227805	ACAUUCA	ENSMUST00000168977.1|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1 	ENSMUST00000021670.8|Ylpm1|ENSMUSG00000021244.9|YLP motif containing 1
mm10_v2_chr3_-_138489372_138489411	0.227599	ACAUUCA	ENSMUST00000029804.8|Metap1|ENSMUSG00000005813.8|methionyl aminopeptidase 1
mm10_v2_chr10_+_93160824_93160894	0.225558	ACAUUCA	ENSMUST00000069965.7|Cdk17|ENSMUSG00000020015.9|cyclin-dependent kinase 17
mm10_v2_chr11_+_68691906_68691915	0.224656	ACAUUCA	ENSMUST00000102611.3|Myh10|ENSMUSG00000020900.9|myosin, heavy polypeptide 10, non-muscle
mm10_v2_chr7_-_144738478_144738508	0.224222	ACAUUCA	ENSMUST00000121758.1|Ano1|ENSMUSG00000031075.11|anoctamin 1, calcium activated chloride channel
mm10_v2_chr11_+_105589970_105590028	0.222655	ACAUUCA	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chrX_-_112698642_112698657	0.221225	ACAUUCA	ENSMUST00000039887.3|Pof1b|ENSMUSG00000034607.6|premature ovarian failure 1B
mm10_v2_chr8_-_47990535_47990577	0.221142	ACAUUCA	ENSMUST00000057561.7|Wwc2|ENSMUSG00000031563.7|WW, C2 and coiled-coil domain containing 2
mm10_v2_chr15_+_80711292_80711340	0.2196	ACAUUCA	ENSMUST00000067689.7|Tnrc6b|ENSMUSG00000047888.9|trinucleotide repeat containing 6b
mm10_v2_chr5_-_23616528_23616597	0.218852	ACAUUCA	ENSMUST00000088392.4|Srpk2|ENSMUSG00000062604.7|serine/arginine-rich protein specific kinase 2
mm10_v2_chr4_-_25281801_25281830	0.218335	ACAUUCA	ENSMUST00000102994.3|Ufl1|ENSMUSG00000040359.8|UFM1 specific ligase 1
mm10_v2_chrX_-_53269786_53269858	0.217633	ACAUUCA	ENSMUST00000114841.1|Fam122b|ENSMUSG00000036022.9|family with sequence similarity 122, member B 	ENSMUST00000071023.5|Fam122b|ENSMUSG00000036022.9|family with sequence similarity 122, member B
mm10_v2_chr4_+_48585135_48585187	0.213836	ACAUUCA	ENSMUST00000030032.6|Tmeff1|ENSMUSG00000028347.8|transmembrane protein with EGF-like and two follistatin-like domains 1
mm10_v2_chr9_-_59486610_59486621	0.208912	ACAUUCA	ENSMUST00000171975.1|Arih1|ENSMUSG00000025234.5|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
mm10_v2_chr7_-_42727017_42727017	0.208884	ACAUUCA	ENSMUST00000166837.1|Gm17067|ENSMUSG00000091594.1|predicted gene 17067
mm10_v2_chr19_+_55742242_55742468	0.208605	ACAUUCA	ENSMUST00000111652.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111649.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111651.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111653.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000111656.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000127233.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box 	ENSMUST00000153888.1|Tcf7l2|ENSMUSG00000024985.12|transcription factor 7 like 2, T cell specific, HMG box
mm10_v2_chr5_+_65107551_65107582	0.208311	ACAUUCA	ENSMUST00000101192.2|Klhl5|ENSMUSG00000054920.6|kelch-like 5
mm10_v2_chr2_+_16356294_16356316	0.205005	ACAUUCA	ENSMUST00000028081.6|Plxdc2|ENSMUSG00000026748.7|plexin domain containing 2
mm10_v2_chr10_-_115251407_115251493	0.204835	ACAUUCA	ENSMUST00000020339.8|Tbc1d15|ENSMUSG00000020130.8|TBC1 domain family, member 15
mm10_v2_chr14_+_30715599_30715641	0.203898	ACAUUCA	ENSMUST00000054230.4|Sfmbt1|ENSMUSG00000006527.8|Scm-like with four mbt domains 1
mm10_v2_chr3_+_129199919_129199943	0.2013	ACAUUCA	ENSMUST00000029657.9|Pitx2|ENSMUSG00000028023.10|paired-like homeodomain transcription factor 2 	ENSMUST00000106382.4|Pitx2|ENSMUSG00000028023.10|paired-like homeodomain transcription factor 2
mm10_v2_chr5_+_115429585_115429613	0.199356	ACAUUCA	ENSMUST00000150779.1|Msi1|ENSMUSG00000054256.5|musashi RNA-binding protein 1
mm10_v2_chr4_+_136469755_136469850	0.198576	ACAUUCA	ENSMUST00000170102.1|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1 	ENSMUST00000105849.2|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1 	ENSMUST00000129230.2|Luzp1|ENSMUSG00000001089.8|leucine zipper protein 1
mm10_v2_chr11_+_77686155_77686179	0.198223	ACAUUCA	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr13_+_106947104_106947164	0.198059	ACAUUCA	ENSMUST00000022203.8|Dimt1|ENSMUSG00000021692.8|DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)
mm10_v2_chr16_+_17233560_17233664	0.197259	ACAUUCA	ENSMUST00000090190.5|Hic2|ENSMUSG00000050240.8|hypermethylated in cancer 2 	ENSMUST00000115698.2|Hic2|ENSMUSG00000050240.8|hypermethylated in cancer 2
mm10_v2_chr11_-_74724670_74724702	0.196609	ACAUUCA	ENSMUST00000021091.8|Pafah1b1|ENSMUSG00000020745.9|platelet-activating factor acetylhydrolase, isoform 1b, subunit 1
mm10_v2_chr4_+_118409331_118409401	0.196256	ACAUUCA	ENSMUST00000084319.4|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000106384.3|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000126089.1|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000073881.1|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000019229.8|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) 	ENSMUST00000144577.1|Med8|ENSMUSG00000006392.10|mediator of RNA polymerase II transcription, subunit 8 homolog (yeast)
mm10_v2_chr15_-_103239812_103239888	0.195393	ACAUUCA	ENSMUST00000118152.1|Cbx5|ENSMUSG00000009575.8|chromobox 5
mm10_v2_chr10_-_49788743_49788769	0.194119	ACAUUCA	ENSMUST00000105483.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2) 	ENSMUST00000105487.1|Grik2|ENSMUSG00000056073.8|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm10_v2_chr5_+_137518880_137518880	0.193402	ACAUUCA	ENSMUST00000031727.7|Gigyf1|ENSMUSG00000029714.7|GRB10 interacting GYF protein 1
mm10_v2_chr12_+_40446050_40446099	0.191564	ACAUUCA	ENSMUST00000037488.6|Dock4|ENSMUSG00000035954.9|dedicator of cytokinesis 4
mm10_v2_chr13_-_66441078_66441131	0.19088	ACAUUCA	ENSMUST00000172579.1|2410141K09Rik|ENSMUSG00000074832.4|RIKEN cDNA 2410141K09 gene 	ENSMUST00000174883.1|2410141K09Rik|ENSMUSG00000074832.4|RIKEN cDNA 2410141K09 gene 	ENSMUST00000173583.1|2410141K09Rik|ENSMUSG00000074832.4|RIKEN cDNA 2410141K09 gene
mm10_v2_chr1_-_23383149_23383225	0.190258	ACAUUCA	ENSMUST00000027343.5|Ogfrl1|ENSMUSG00000026158.5|opioid growth factor receptor-like 1
mm10_v2_chr4_+_11579647_11579674	0.189704	ACAUUCA	ENSMUST00000180239.1|Fsbp|ENSMUSG00000094595.1|fibrinogen silencer binding protein
mm10_v2_chr4_+_28813125_28813136	0.189257	ACAUUCA	ENSMUST00000029964.5|Epha7|ENSMUSG00000028289.6|Eph receptor A7 	ENSMUST00000080934.4|Epha7|ENSMUSG00000028289.6|Eph receptor A7
mm10_v2_chr8_-_36249292_36249516	0.187094	ACAUUCA	ENSMUST00000065297.5|Lonrf1|ENSMUSG00000039633.6|LON peptidase N-terminal domain and ring finger 1
mm10_v2_chr16_-_32003122_32003287	0.185996	ACAUUCA	ENSMUST00000023457.5|Senp5|ENSMUSG00000022772.5|SUMO/sentrin specific peptidase 5
mm10_v2_chr3_-_103791537_103791563	0.185981	ACAUUCA	ENSMUST00000118317.1|Hipk1|ENSMUSG00000008730.11|homeodomain interacting protein kinase 1
mm10_v2_chr11_-_59472464_59472488	0.184928	ACAUUCA	ENSMUST00000057799.7|Zfp867|ENSMUSG00000054519.8|zinc finger protein 867
mm10_v2_chr8_-_69710724_69710724	0.184298	ACAUUCA	ENSMUST00000080987.6|Zfp869|ENSMUSG00000054648.7|zinc finger protein 869
mm10_v2_chr5_-_52566264_52566312	0.18074	ACAUUCA	ENSMUST00000039750.5|Lgi2|ENSMUSG00000039252.7|leucine-rich repeat LGI family, member 2
mm10_v2_chr17_-_91092715_91092822	0.18057	ACAUUCA	ENSMUST00000160800.2|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000159778.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000160844.3|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr5_+_64160207_64160220	0.179533	ACAUUCA	ENSMUST00000101195.2|Tbc1d1|ENSMUSG00000029174.12|TBC1 domain family, member 1
mm10_v2_chr1_+_9547948_9548101	0.179281	ACAUUCA	ENSMUST00000144177.1|Adhfe1|ENSMUSG00000025911.8|alcohol dehydrogenase, iron containing, 1
mm10_v2_chr3_+_98382438_98382520	0.178853	ACAUUCA	ENSMUST00000056096.8|Zfp697|ENSMUSG00000050064.8|zinc finger protein 697
mm10_v2_chr16_+_97997313_97997362	0.17788	ACAUUCA	ENSMUST00000122450.1|B230307C23Rik|ENSMUSG00000080717.3|RIKEN cDNA B230307C23 gene
mm10_v2_chr1_-_152902628_152902669	0.175978	ACAUUCA	ENSMUST00000111836.2|Smg7|ENSMUSG00000042772.9|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) 	ENSMUST00000073441.6|Smg7|ENSMUSG00000042772.9|Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm10_v2_chr9_-_96631487_96631617	0.175859	ACAUUCA	ENSMUST00000128346.1|Rasa2|ENSMUSG00000032413.6|RAS p21 protein activator 2 	ENSMUST00000034984.6|Rasa2|ENSMUSG00000032413.6|RAS p21 protein activator 2
mm10_v2_chr3_+_19188099_19188110	0.175132	ACAUUCA	ENSMUST00000130645.1|Mtfr1|ENSMUSG00000027601.7|mitochondrial fission regulator 1
mm10_v2_chr11_-_97187872_97187926	0.174517	ACAUUCA	ENSMUST00000001479.4|Kpnb1|ENSMUSG00000001440.5|karyopherin (importin) beta 1
mm10_v2_chr14_-_56778301_56778352	0.173291	ACAUUCA	ENSMUST00000022507.5|Pspc1|ENSMUSG00000021938.5|paraspeckle protein 1 	ENSMUST00000163924.1|Pspc1|ENSMUSG00000021938.5|paraspeckle protein 1
mm10_v2_chr7_-_121707253_121707460	0.164109	ACAUUCA	ENSMUST00000046929.6|Usp31|ENSMUSG00000063317.6|ubiquitin specific peptidase 31
mm10_v2_chr1_-_164458345_164458363	0.163955	ACAUUCA	ENSMUST00000027863.7|Atp1b1|ENSMUSG00000026576.7|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm10_v2_chr11_-_51756378_51756618	0.162824	ACAUUCA	ENSMUST00000109092.1|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000064297.4|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae) 	ENSMUST00000109097.2|Sec24a|ENSMUSG00000036391.10|Sec24 related gene family, member A (S. cerevisiae)
mm10_v2_chr13_+_21362826_21362883	0.162338	ACAUUCA	ENSMUST00000053293.6|Zscan12|ENSMUSG00000036721.7|zinc finger and SCAN domain containing 12
mm10_v2_chr12_+_69184158_69184170	0.161738	ACAUUCA	ENSMUST00000060579.8|Mgat2|ENSMUSG00000043998.9|mannoside acetylglucosaminyltransferase 2
mm10_v2_chr7_+_30169861_30169912	0.161435	ACAUUCA	ENSMUST00000085668.4|Gm5113|ENSMUSG00000066647.5|predicted gene 5113
mm10_v2_chrX_+_136822671_136822780	0.160306	ACAUUCA	ENSMUST00000033800.6|Plp1|ENSMUSG00000031425.9|proteolipid protein (myelin) 1
mm10_v2_chr2_+_154436437_154436535	0.158605	ACAUUCA	ENSMUST00000109725.1|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000099178.3|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000045270.8|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000109724.1|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm10_v2_chr6_+_40110251_40110251	0.155788	ACAUUCA	ENSMUST00000061740.7|Tmem178b|ENSMUSG00000057716.6|transmembrane protein 178B
mm10_v2_chr7_-_144553657_144553757	0.155725	ACAUUCA	ENSMUST00000168134.3|Ppfia1|ENSMUSG00000037519.10|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
mm10_v2_chr9_-_80465429_80465481	0.155521	ACAUUCA	ENSMUST00000085289.5|Impg1|ENSMUSG00000032343.9|interphotoreceptor matrix proteoglycan 1 	ENSMUST00000185068.1|Impg1|ENSMUSG00000032343.9|interphotoreceptor matrix proteoglycan 1 	ENSMUST00000113250.3|Impg1|ENSMUSG00000032343.9|interphotoreceptor matrix proteoglycan 1
mm10_v2_chr6_+_92091378_92091390	0.154323	ACAUUCA	ENSMUST00000113460.1|Nr2c2|ENSMUSG00000005893.8|nuclear receptor subfamily 2, group C, member 2
mm10_v2_chr3_-_56183678_56183701	0.15181	ACAUUCA	ENSMUST00000029374.6|Nbea|ENSMUSG00000027799.8|neurobeachin
mm10_v2_chr13_+_111686178_111686210	0.151299	ACAUUCA	ENSMUST00000109272.2|Mier3|ENSMUSG00000032727.7|mesoderm induction early response 1, family member 3
mm10_v2_chr17_+_86167777_86167795	0.149767	ACAUUCA	ENSMUST00000097275.2|Prkce|ENSMUSG00000045038.8|protein kinase C, epsilon
mm10_v2_chr16_+_4684070_4684137	0.148095	ACAUUCA	ENSMUST00000060067.5|Dnaja3|ENSMUSG00000004069.10|DnaJ (Hsp40) homolog, subfamily A, member 3 	ENSMUST00000115854.3|Dnaja3|ENSMUSG00000004069.10|DnaJ (Hsp40) homolog, subfamily A, member 3
mm10_v2_chr6_+_86849488_86849628	0.148048	ACAUUCA	ENSMUST00000089519.6|Aak1|ENSMUSG00000057230.7|AP2 associated kinase 1 	ENSMUST00000113668.1|Aak1|ENSMUSG00000057230.7|AP2 associated kinase 1
mm10_v2_chrX_+_98149666_98149721	0.146192	ACAUUCA	ENSMUST00000052837.7|Ar|ENSMUSG00000046532.7|androgen receptor
mm10_v2_chr2_-_113758638_113758655	0.144785	ACAUUCA	ENSMUST00000099575.3|Grem1|ENSMUSG00000074934.3|gremlin 1
mm10_v2_chr8_+_82863351_82863397	0.143978	ACAUUCA	ENSMUST00000078525.5|Rnf150|ENSMUSG00000047747.9|ring finger protein 150
mm10_v2_chr9_-_69760924_69760940	0.14372	ACAUUCA	ENSMUST00000071281.4|Foxb1|ENSMUSG00000059246.4|forkhead box B1
mm10_v2_chr3_-_105053125_105053151	0.142432	ACAUUCA	ENSMUST00000077548.5|Cttnbp2nl|ENSMUSG00000062127.5|CTTNBP2 N-terminal like
mm10_v2_chr3_+_63976106_63976135	0.140705	ACAUUCA	ENSMUST00000029405.7|Gmps|ENSMUSG00000027823.8|guanine monophosphate synthetase
mm10_v2_chr10_+_81136223_81136271	0.139682	ACAUUCA	ENSMUST00000048128.8|Zbtb7a|ENSMUSG00000035011.9|zinc finger and BTB domain containing 7a
mm10_v2_chr11_+_88047693_88047727	0.136346	ACAUUCA	ENSMUST00000079866.4|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr1_+_191906743_191906767	0.135876	ACAUUCA	ENSMUST00000044954.6|Slc30a1|ENSMUSG00000037434.7|solute carrier family 30 (zinc transporter), member 1
mm10_v2_chr12_-_101028983_101029042	0.134551	ACAUUCA	ENSMUST00000068411.3|Ccdc88c|ENSMUSG00000021182.8|coiled-coil domain containing 88C 	ENSMUST00000085096.3|Ccdc88c|ENSMUSG00000021182.8|coiled-coil domain containing 88C
mm10_v2_chr2_+_20737306_20737321	0.134303	ACAUUCA	ENSMUST00000114606.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4 	ENSMUST00000114608.1|Etl4|ENSMUSG00000036617.10|enhancer trap locus 4
mm10_v2_chr5_-_148552783_148552843	0.134057	ACAUUCA	ENSMUST00000079324.7|Ubl3|ENSMUSG00000001687.9|ubiquitin-like 3 	ENSMUST00000164904.1|Ubl3|ENSMUSG00000001687.9|ubiquitin-like 3
mm10_v2_chr2_-_64097994_64098023	0.133935	ACAUUCA	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr13_+_30136498_30136527	0.133914	ACAUUCA	ENSMUST00000047311.8|Mboat1|ENSMUSG00000038732.8|membrane bound O-acyltransferase domain containing 1
mm10_v2_chr13_+_73467197_73467316	0.133615	ACAUUCA	ENSMUST00000022099.8|Lpcat1|ENSMUSG00000021608.8|lysophosphatidylcholine acyltransferase 1
mm10_v2_chr11_+_46810792_46810809	0.130234	ACAUUCA	ENSMUST00000068877.6|Timd4|ENSMUSG00000055546.6|T cell immunoglobulin and mucin domain containing 4
mm10_v2_chr16_-_62786742_62786797	0.128758	ACAUUCA	ENSMUST00000152553.1|Nsun3|ENSMUSG00000050312.5|NOL1/NOP2/Sun domain family member 3 	ENSMUST00000063089.5|Nsun3|ENSMUSG00000050312.5|NOL1/NOP2/Sun domain family member 3
mm10_v2_chr6_-_38876163_38876234	0.128682	ACAUUCA	ENSMUST00000161779.1|Hipk2|ENSMUSG00000061436.9|homeodomain interacting protein kinase 2
mm10_v2_chr5_-_147307264_147307281	0.128662	ACAUUCA	ENSMUST00000031650.3|Cdx2|ENSMUSG00000029646.3|caudal type homeobox 2
mm10_v2_chr8_+_107150621_107150690	0.125079	ACAUUCA	ENSMUST00000034400.3|Cyb5b|ENSMUSG00000031924.3|cytochrome b5 type B
mm10_v2_chr12_+_84114321_84114391	0.121344	ACAUUCA	ENSMUST00000123491.1|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1 	ENSMUST00000046340.2|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1 	ENSMUST00000136159.1|Dnal1|ENSMUSG00000042523.6|dynein, axonemal, light chain 1
mm10_v2_chr15_-_53902472_53902530	0.119915	ACAUUCA	ENSMUST00000078673.6|Samd12|ENSMUSG00000058656.6|sterile alpha motif domain containing 12
mm10_v2_chr12_-_85097080_85097091	0.11969	ACAUUCA	ENSMUST00000177289.2|Prox2|ENSMUSG00000042320.10|prospero homeobox 2
mm10_v2_chr6_+_124304646_124304671	0.119295	ACAUUCA	ENSMUST00000112541.2|Cd163|ENSMUSG00000008845.3|CD163 antigen 	ENSMUST00000032234.2|Cd163|ENSMUSG00000008845.3|CD163 antigen
mm10_v2_chr8_+_54954728_54954820	0.118883	ACAUUCA	ENSMUST00000033915.7|Gpm6a|ENSMUSG00000031517.7|glycoprotein m6a
mm10_v2_chr18_+_43207679_43207700	0.118594	ACAUUCA	ENSMUST00000045477.4|Stk32a|ENSMUSG00000039954.8|serine/threonine kinase 32A
mm10_v2_chr2_+_76675265_76675287	0.117597	ACAUUCA	ENSMUST00000111920.1|Plekha3|ENSMUSG00000002733.8|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
mm10_v2_chr5_+_145231710_145231754	0.117457	ACAUUCA	ENSMUST00000167316.1|Zfp655|ENSMUSG00000007812.10|zinc finger protein 655 	ENSMUST00000085661.7|Zfp655|ENSMUSG00000007812.10|zinc finger protein 655
mm10_v2_chr2_+_104590453_104590533	0.115776	ACAUUCA	ENSMUST00000028599.7|Cstf3|ENSMUSG00000027176.8|cleavage stimulation factor, 3' pre-RNA, subunit 3
mm10_v2_chr2_-_58357752_58357895	0.11552	ACAUUCA	ENSMUST00000112608.2|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC 	ENSMUST00000112607.2|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC 	ENSMUST00000028178.7|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC
mm10_v2_chr12_+_56695628_56695700	0.113225	ACAUUCA	ENSMUST00000001538.9|Pax9|ENSMUSG00000001497.12|paired box gene 9
mm10_v2_chr6_+_125215551_125215591	0.113145	ACAUUCA	ENSMUST00000032487.7|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1 	ENSMUST00000100942.2|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1 	ENSMUST00000063588.8|Vamp1|ENSMUSG00000030337.10|vesicle-associated membrane protein 1
mm10_v2_chr15_-_43170809_43170834	0.112833	ACAUUCA	ENSMUST00000063492.6|Rspo2|ENSMUSG00000051920.6|R-spondin 2 homolog (Xenopus laevis)
mm10_v2_chr4_+_15881255_15881272	0.112179	ACAUUCA	ENSMUST00000029876.1|Calb1|ENSMUSG00000028222.2|calbindin 1
mm10_v2_chr2_+_32450444_32450462	0.109111	ACAUUCA	ENSMUST00000048431.2|Naif1|ENSMUSG00000039164.2|nuclear apoptosis inducing factor 1
mm10_v2_chr9_+_98296556_98296583	0.107811	ACAUUCA	ENSMUST00000035031.6|Nmnat3|ENSMUSG00000032456.7|nicotinamide nucleotide adenylyltransferase 3 	ENSMUST00000112935.1|Nmnat3|ENSMUSG00000032456.7|nicotinamide nucleotide adenylyltransferase 3
mm10_v2_chr16_+_91729281_91729390	0.107561	ACAUUCA	ENSMUST00000114001.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000113999.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000064797.5|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000114002.2|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000095909.3|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000056482.7|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A) 	ENSMUST00000113996.1|Itsn1|ENSMUSG00000022957.13|intersectin 1 (SH3 domain protein 1A)
mm10_v2_chr10_-_76345254_76345371	0.106753	ACAUUCA	ENSMUST00000036033.7|Dip2a|ENSMUSG00000020231.9|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENSMUST00000160048.1|Dip2a|ENSMUSG00000020231.9|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENSMUST00000105417.3|Dip2a|ENSMUSG00000020231.9|DIP2 disco-interacting protein 2 homolog A (Drosophila)
mm10_v2_chr4_+_8691303_8691380	0.104941	ACAUUCA	ENSMUST00000051558.3|Chd7|ENSMUSG00000041235.5|chromodomain helicase DNA binding protein 7
mm10_v2_chr3_+_53463666_53463681	0.104602	ACAUUCA	ENSMUST00000058577.4|Proser1|ENSMUSG00000049504.11|proline and serine rich 1
mm10_v2_chr1_-_23922283_23922366	0.104031	ACAUUCA	ENSMUST00000027339.7|Smap1|ENSMUSG00000026155.7|small ArfGAP 1
mm10_v2_chr11_+_115765420_115765466	0.103026	ACAUUCA	ENSMUST00000093912.4|2310067B10Rik|ENSMUSG00000020747.11|RIKEN cDNA 2310067B10 gene 	ENSMUST00000136720.1|2310067B10Rik|ENSMUSG00000020747.11|RIKEN cDNA 2310067B10 gene 	ENSMUST00000103034.3|2310067B10Rik|ENSMUSG00000020747.11|RIKEN cDNA 2310067B10 gene 	ENSMUST00000141871.1|2310067B10Rik|ENSMUSG00000020747.11|RIKEN cDNA 2310067B10 gene
mm10_v2_chr10_-_18743691_18743760	0.102911	ACAUUCA	ENSMUST00000019999.5|D10Bwg1379e|ENSMUSG00000019852.6|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed
mm10_v2_chr2_-_150689360_150689360	0.100651	ACAUUCA	ENSMUST00000046095.8|Vsx1|ENSMUSG00000033080.8|visual system homeobox 1 homolog (zebrafish)
mm10_v2_chr11_+_17159263_17159357	0.0952976	ACAUUCA	ENSMUST00000102880.4|Ppp3r1|ENSMUSG00000033953.10|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm10_v2_chr2_+_176226569_176226573	0.0949382	ACAUUCA	ENSMUST00000099009.2|2210418O10Rik|ENSMUSG00000078894.3|RIKEN cDNA 2210418O10 gene 	ENSMUST00000136719.1|2210418O10Rik|ENSMUSG00000078894.3|RIKEN cDNA 2210418O10 gene
mm10_v2_chr8_-_61902669_61902713	0.0946947	ACAUUCA	ENSMUST00000121785.1|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein 	ENSMUST00000034057.7|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein
mm10_v2_chr9_+_107551516_107551575	0.0935014	ACAUUCA	ENSMUST00000093786.2|Rassf1|ENSMUSG00000010067.7|Ras association (RalGDS/AF-6) domain family member 1 	ENSMUST00000122225.1|Rassf1|ENSMUSG00000010067.7|Ras association (RalGDS/AF-6) domain family member 1
mm10_v2_chr9_+_54699548_54699565	0.0925149	ACAUUCA	ENSMUST00000070070.7|Dnaja4|ENSMUSG00000032285.9|DnaJ (Hsp40) homolog, subfamily A, member 4
mm10_v2_chr5_+_142401484_142401532	0.0905211	ACAUUCA	ENSMUST00000072837.5|Foxk1|ENSMUSG00000056493.8|forkhead box K1
mm10_v2_chr18_-_44662251_44662266	0.0904147	ACAUUCA	ENSMUST00000164666.1|Mcc|ENSMUSG00000071856.4|mutated in colorectal cancers
mm10_v2_chr12_+_78861693_78861819	0.0895614	ACAUUCA	ENSMUST00000071230.7|Eif2s1|ENSMUSG00000021116.9|eukaryotic translation initiation factor 2, subunit 1 alpha
mm10_v2_chr3_+_68468162_68468209	0.0888412	ACAUUCA	ENSMUST00000182532.1|Schip1|ENSMUSG00000027777.9|schwannomin interacting protein 1
mm10_v2_chr1_-_52727457_52727474	0.0878057	ACAUUCA	ENSMUST00000156876.1|Mfsd6|ENSMUSG00000041439.9|major facilitator superfamily domain containing 6 	ENSMUST00000087701.3|Mfsd6|ENSMUSG00000041439.9|major facilitator superfamily domain containing 6
mm10_v2_chr18_+_75367529_75367561	0.0863277	ACAUUCA	ENSMUST00000026999.3|Smad7|ENSMUSG00000025880.5|SMAD family member 7
mm10_v2_chr5_+_122850186_122850198	0.0857771	ACAUUCA	ENSMUST00000031434.6|Rnf34|ENSMUSG00000029474.6|ring finger protein 34
mm10_v2_chr6_-_122486252_122486313	0.085646	ACAUUCA	ENSMUST00000068242.6|Rimklb|ENSMUSG00000040649.9|ribosomal modification protein rimK-like family member B
mm10_v2_chr8_+_109778554_109778558	0.0851867	ACAUUCA	ENSMUST00000093157.6|Ap1g1|ENSMUSG00000031731.10|adaptor protein complex AP-1, gamma 1 subunit
mm10_v2_chr3_+_152714094_152714137	0.0849566	ACAUUCA	ENSMUST00000159899.1|Pigk|ENSMUSG00000039047.11|phosphatidylinositol glycan anchor biosynthesis, class K 	ENSMUST00000045029.8|Pigk|ENSMUSG00000039047.11|phosphatidylinositol glycan anchor biosynthesis, class K
mm10_v2_chr15_-_36794498_36794547	0.0840836	ACAUUCA	ENSMUST00000110361.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000022894.7|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000110359.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm10_v2_chr4_-_40853950_40854021	0.0835929	ACAUUCA	ENSMUST00000030121.6|B4galt1|ENSMUSG00000028413.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 	ENSMUST00000108096.2|B4galt1|ENSMUSG00000028413.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
mm10_v2_chr3_+_126363827_126363827	0.0822947	ACAUUCA	ENSMUST00000093976.2|Arsj|ENSMUSG00000046561.8|arylsulfatase J
mm10_v2_chr5_+_98854434_98854466	0.0819966	ACAUUCA	ENSMUST00000031278.4|Bmp3|ENSMUSG00000029335.4|bone morphogenetic protein 3
mm10_v2_chr11_-_70687917_70687981	0.0814719	ACAUUCA	ENSMUST00000108545.2|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000120261.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000036299.7|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000119120.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000100933.3|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2
mm10_v2_chr13_+_51651697_51651746	0.0812834	ACAUUCA	ENSMUST00000040117.8|Secisbp2|ENSMUSG00000035139.8|SECIS binding protein 2 	ENSMUST00000110044.1|Secisbp2|ENSMUSG00000035139.8|SECIS binding protein 2
mm10_v2_chr11_-_79530569_79530609	0.0811863	ACAUUCA	ENSMUST00000103236.3|Evi2a|ENSMUSG00000078771.4|ecotropic viral integration site 2a 	ENSMUST00000170422.2|Evi2b|ENSMUSG00000093938.1|ecotropic viral integration site 2b 	ENSMUST00000170799.1|Evi2a|ENSMUSG00000078771.4|ecotropic viral integration site 2a
mm10_v2_chr5_-_147725988_147726023	0.076018	ACAUUCA	ENSMUST00000110529.1|Flt1|ENSMUSG00000029648.7|FMS-like tyrosine kinase 1 	ENSMUST00000031652.3|Flt1|ENSMUSG00000029648.7|FMS-like tyrosine kinase 1 	ENSMUST00000031653.5|Flt1|ENSMUSG00000029648.7|FMS-like tyrosine kinase 1
mm10_v2_chr2_-_132029845_132030001	0.0742889	ACAUUCA	ENSMUST00000028814.8|Rassf2|ENSMUSG00000027339.9|Ras association (RalGDS/AF-6) domain family member 2
mm10_v2_chr15_+_102990576_102990622	0.0711136	ACAUUCA	ENSMUST00000001703.6|Hoxc8|ENSMUSG00000001657.6|homeobox C8
mm10_v2_chr19_+_10001669_10001703	0.0697878	ACAUUCA	ENSMUST00000121418.1|Rab3il1|ENSMUSG00000024663.11|RAB3A interacting protein (rabin3)-like 1
mm10_v2_chr5_-_8367982_8368107	0.0679329	ACAUUCA	ENSMUST00000088761.4|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115386.1|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000050166.7|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000046838.7|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115388.2|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000088744.5|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22 	ENSMUST00000115385.1|Adam22|ENSMUSG00000040537.11|a disintegrin and metallopeptidase domain 22
mm10_v2_chr4_-_149485202_149485223	0.067793	ACAUUCA	ENSMUST00000119921.1|Nmnat1|ENSMUSG00000028992.7|nicotinamide nucleotide adenylyltransferase 1
mm10_v2_chrX_-_64276937_64277002	0.0666783	ACAUUCA	ENSMUST00000114679.1|Slitrk4|ENSMUSG00000046699.8|SLIT and NTRK-like family, member 4 	ENSMUST00000069926.7|Slitrk4|ENSMUSG00000046699.8|SLIT and NTRK-like family, member 4
mm10_v2_chr14_+_54431597_54431673	0.06621	ACAUUCA	ENSMUST00000089688.4|Mmp14|ENSMUSG00000000957.8|matrix metallopeptidase 14 (membrane-inserted)
mm10_v2_chr4_+_33924632_33924651	0.0658321	ACAUUCA	ENSMUST00000057188.6|Cnr1|ENSMUSG00000044288.6|cannabinoid receptor 1 (brain)
mm10_v2_chr5_+_106964319_106964383	0.0653113	ACAUUCA	ENSMUST00000031221.5|Cdc7|ENSMUSG00000029283.11|cell division cycle 7 (S. cerevisiae) 	ENSMUST00000117196.2|Cdc7|ENSMUSG00000029283.11|cell division cycle 7 (S. cerevisiae) 	ENSMUST00000076467.6|Cdc7|ENSMUSG00000029283.11|cell division cycle 7 (S. cerevisiae)
mm10_v2_chr5_+_15934685_15934696	0.0639716	ACAUUCA	ENSMUST00000078272.6|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000180204.1|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000167946.2|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000101581.3|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000039370.7|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1
mm10_v2_chr17_-_80290476_80290476	0.0619851	ACAUUCA	ENSMUST00000086555.3|Dhx57|ENSMUSG00000035051.8|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 	ENSMUST00000038166.7|Dhx57|ENSMUSG00000035051.8|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm10_v2_chr9_+_32116040_32116136	0.0614205	ACAUUCA	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr8_-_113848615_113848774	0.0611249	ACAUUCA	ENSMUST00000093113.4|Adamts18|ENSMUSG00000053399.8|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18
mm10_v2_chr16_-_23988852_23988852	0.0607	ACAUUCA	ENSMUST00000023151.5|Bcl6|ENSMUSG00000022508.5|B cell leukemia/lymphoma 6
mm10_v2_chr2_-_176927809_176927809	0.0604105	ACAUUCA	ENSMUST00000099007.2|Gm14296|ENSMUSG00000074527.5|predicted gene 14296
mm10_v2_chr16_-_22163299_22163299	0.0580918	ACAUUCA	ENSMUST00000100052.4|Igf2bp2|ENSMUSG00000033581.10|insulin-like growth factor 2 mRNA binding protein 2
mm10_v2_chr14_+_13284774_13284793	0.0576368	ACAUUCA	ENSMUST00000070323.5|Synpr|ENSMUSG00000056296.10|synaptoporin
mm10_v2_chr2_+_150218073_150218073	0.0573724	ACAUUCA	ENSMUST00000073782.3|Zfp937|ENSMUSG00000060336.6|zinc finger protein 937
mm10_v2_chr9_-_45984816_45984871	0.0560509	ACAUUCA	ENSMUST00000172450.1|Pafah1b2|ENSMUSG00000003131.6|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm10_v2_chr18_+_12333953_12334024	0.0556697	ACAUUCA	ENSMUST00000092070.6|Lama3|ENSMUSG00000024421.10|laminin, alpha 3
mm10_v2_chr15_+_100038635_100038669	0.0538364	ACAUUCA	ENSMUST00000100203.3|Dip2b|ENSMUSG00000023026.9|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm10_v2_chr11_+_44518959_44519000	0.0533298	ACAUUCA	ENSMUST00000019333.3|Rnf145|ENSMUSG00000019189.7|ring finger protein 145
mm10_v2_chr3_+_59006978_59006978	0.0512943	ACAUUCA	ENSMUST00000040325.7|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000164225.1|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000040846.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like 	ENSMUST00000029393.8|Med12l|ENSMUSG00000056476.7|mediator of RNA polymerase II transcription, subunit 12 homolog (yeast)-like
mm10_v2_chr8_-_104443001_104443047	0.0488828	ACAUUCA	ENSMUST00000041769.6|Dync1li2|ENSMUSG00000035770.7|dynein, cytoplasmic 1 light intermediate chain 2
mm10_v2_chr3_+_88532314_88532396	0.0462681	ACAUUCA	ENSMUST00000172699.1|Mex3a|ENSMUSG00000074480.4|mex3 homolog A (C. elegans)
mm10_v2_chrX_-_158043266_158043294	0.0458994	ACAUUCA	ENSMUST00000026750.8|Cnksr2|ENSMUSG00000025658.10|connector enhancer of kinase suppressor of Ras 2 	ENSMUST00000112513.1|Cnksr2|ENSMUSG00000025658.10|connector enhancer of kinase suppressor of Ras 2
mm10_v2_chr19_+_8989277_8989295	0.0443826	ACAUUCA	ENSMUST00000092955.3|Ahnak|ENSMUSG00000069833.6|AHNAK nucleoprotein (desmoyokin) 	ENSMUST00000092956.2|Ahnak|ENSMUSG00000069833.6|AHNAK nucleoprotein (desmoyokin)
mm10_v2_chr13_-_89742490_89742515	0.0421768	ACAUUCA	ENSMUST00000109546.2|Vcan|ENSMUSG00000021614.10|versican
mm10_v2_chr10_+_99263224_99263240	0.041635	ACAUUCA	ENSMUST00000020118.4|Dusp6|ENSMUSG00000019960.7|dual specificity phosphatase 6
mm10_v2_chr11_+_103116228_103116325	0.0411251	ACAUUCA	ENSMUST00000053063.5|Hexim1|ENSMUSG00000048878.5|hexamethylene bis-acetamide inducible 1
mm10_v2_chr2_-_104494400_104494463	0.0406723	ACAUUCA	ENSMUST00000028600.7|Hipk3|ENSMUSG00000027177.8|homeodomain interacting protein kinase 3
mm10_v2_chr14_-_70766598_70766644	0.0330542	ACAUUCA	ENSMUST00000167242.1|Xpo7|ENSMUSG00000022100.7|exportin 7 	ENSMUST00000022696.6|Xpo7|ENSMUSG00000022100.7|exportin 7
mm10_v2_chr12_+_69372112_69372172	0.0329831	ACAUUCA	ENSMUST00000050063.7|Arf6|ENSMUSG00000044147.7|ADP-ribosylation factor 6
mm10_v2_chr11_+_4257557_4257557	0.0328194	ACAUUCA	ENSMUST00000066283.5|Lif|ENSMUSG00000034394.8|leukemia inhibitory factor
mm10_v2_chr2_-_63184253_63184292	0.0327604	ACAUUCA	ENSMUST00000075052.3|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7 	ENSMUST00000112454.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr2_-_25580099_25580099	0.0322138	ACAUUCA	ENSMUST00000114217.1|Gm996|ENSMUSG00000029419.7|predicted gene 996
mm10_v2_chr6_+_110645572_110645588	0.0312887	ACAUUCA	ENSMUST00000071076.6|Grm7|ENSMUSG00000056755.7|glutamate receptor, metabotropic 7 	ENSMUST00000172951.1|Grm7|ENSMUSG00000056755.7|glutamate receptor, metabotropic 7
mm10_v2_chr14_-_101609033_101609191	0.0310512	ACAUUCA	ENSMUST00000161991.1|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4 	ENSMUST00000100340.3|Tbc1d4|ENSMUSG00000033083.10|TBC1 domain family, member 4
mm10_v2_chr10_-_117376955_117376978	0.0265081	ACAUUCA	ENSMUST00000069168.6|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6 	ENSMUST00000176686.1|Cpsf6|ENSMUSG00000055531.6|cleavage and polyadenylation specific factor 6
mm10_v2_chr9_+_118926453_118926568	0.0260375	ACAUUCA	ENSMUST00000073109.5|Ctdspl|ENSMUSG00000047409.7|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
mm10_v2_chr17_+_84957993_84958018	0.0260221	ACAUUCA	ENSMUST00000080217.6|Ppm1b|ENSMUSG00000061130.6|protein phosphatase 1B, magnesium dependent, beta isoform 	ENSMUST00000112304.2|Ppm1b|ENSMUSG00000061130.6|protein phosphatase 1B, magnesium dependent, beta isoform
mm10_v2_chr7_-_34389540_34389638	0.0240055	ACAUUCA	ENSMUST00000085585.5|Lsm14a|ENSMUSG00000066568.6|LSM14 homolog A (SCD6, S. cerevisiae)
mm10_v2_chr13_-_99516537_99516602	0.0233266	ACAUUCA	ENSMUST00000064762.4|Map1b|ENSMUSG00000052727.5|microtubule-associated protein 1B
mm10_v2_chr19_+_21272276_21272296	0.0217374	ACAUUCA	ENSMUST00000025659.4|Zfand5|ENSMUSG00000024750.4|zinc finger, AN1-type domain 5
mm10_v2_chr16_+_23107754_23107761	0.0207091	ACAUUCA	ENSMUST00000077605.5|Eif4a2|ENSMUSG00000022884.8|eukaryotic translation initiation factor 4A2 	ENSMUST00000115341.3|Eif4a2|ENSMUSG00000022884.8|eukaryotic translation initiation factor 4A2
mm10_v2_chr2_+_158028687_158028729	0.0206582	ACAUUCA	ENSMUST00000109518.1|Rprd1b|ENSMUSG00000027651.10|regulation of nuclear pre-mRNA domain containing 1B 	ENSMUST00000029180.7|Rprd1b|ENSMUSG00000027651.10|regulation of nuclear pre-mRNA domain containing 1B
mm10_v2_chr9_-_31211805_31211824	0.0179401	ACAUUCA	ENSMUST00000072634.7|Aplp2|ENSMUSG00000031996.10|amyloid beta (A4) precursor-like protein 2 	ENSMUST00000079758.7|Aplp2|ENSMUSG00000031996.10|amyloid beta (A4) precursor-like protein 2
mm10_v2_chr13_-_41220395_41220412	0.0175509	ACAUUCA	ENSMUST00000021793.7|Elovl2|ENSMUSG00000021364.9|elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
mm10_v2_chr7_-_30044734_30044734	0.0174774	ACAUUCA	ENSMUST00000077787.7|Zfp14|ENSMUSG00000053985.9|zinc finger protein 14
mm10_v2_chr19_+_16132812_16132910	0.0173779	ACAUUCA	ENSMUST00000025541.5|Gnaq|ENSMUSG00000024639.5|guanine nucleotide binding protein, alpha q polypeptide
mm10_v2_chr18_+_44380479_44380554	0.0125871	ACAUUCA	ENSMUST00000025350.8|Dcp2|ENSMUSG00000024472.8|DCP2 decapping enzyme homolog (S. cerevisiae)
mm10_v2_chr2_-_129309964_129309978	0.0121806	ACAUUCA	ENSMUST00000028882.1|Il1a|ENSMUSG00000027399.1|interleukin 1 alpha
mm10_v2_chr1_-_192855723_192855752	0.00878323	ACAUUCA	ENSMUST00000155579.1|Sertad4|ENSMUSG00000016262.8|SERTA domain containing 4
mm10_v2_chr5_-_67427794_67427813	0.00723895	ACAUUCA	ENSMUST00000169190.1|Bend4|ENSMUSG00000092060.1|BEN domain containing 4
mm10_v2_chr4_+_130047840_130047901	0.00560303	ACAUUCA	ENSMUST00000044565.8|Col16a1|ENSMUSG00000040690.9|collagen, type XVI, alpha 1 	ENSMUST00000132251.1|Col16a1|ENSMUSG00000040690.9|collagen, type XVI, alpha 1
mm10_v2_chr4_+_62965560_62965617	0.00309159	ACAUUCA	ENSMUST00000030043.6|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000107415.1|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618 	ENSMUST00000064814.5|Zfp618|ENSMUSG00000028358.9|zinc finger protein 618
mm10_v2_chr7_-_28598140_28598185	0.00306627	ACAUUCA	ENSMUST00000040531.8|Samd4b|ENSMUSG00000037513.9|sterile alpha motif domain containing 4B 	ENSMUST00000108283.1|Pak4|ENSMUSG00000030602.6|p21 protein (Cdc42/Rac)-activated kinase 4
