mm10_v2_chr7_+_114415272_114415297	2.27315	ACAGUAU	ENSMUST00000032909.8|Pde3b|ENSMUSG00000030671.8|phosphodiesterase 3B, cGMP-inhibited
mm10_v2_chr2_+_23068168_23068241	2.04241	ACAGUAU	ENSMUST00000028121.7|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000114523.2|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000144088.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr2_+_109917639_109917656	1.80355	ACAGUAU	ENSMUST00000046548.7|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4 	ENSMUST00000111037.2|Lgr4|ENSMUSG00000050199.7|leucine-rich repeat-containing G protein-coupled receptor 4
mm10_v2_chr18_-_16809233_16809324	1.69565	ACAGUAU	ENSMUST00000025166.7|Cdh2|ENSMUSG00000024304.8|cadherin 2
mm10_v2_chr1_+_187997821_187997834	1.68841	ACAGUAU	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr12_-_75735729_75735736	1.66318	ACAGUAU	ENSMUST00000021450.4|Sgpp1|ENSMUSG00000021054.5|sphingosine-1-phosphate phosphatase 1
mm10_v2_chr8_+_107150621_107150690	1.59971	ACAGUAU	ENSMUST00000034400.3|Cyb5b|ENSMUSG00000031924.3|cytochrome b5 type B
mm10_v2_chr5_+_73491026_73491110	1.51842	ACAGUAU	ENSMUST00000063882.5|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) 	ENSMUST00000113558.1|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
mm10_v2_chr19_-_29805989_29806009	1.43307	ACAGUAU	ENSMUST00000177155.1|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene 	ENSMUST00000059484.7|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene
mm10_v2_chr11_+_95414078_95414243	1.43291	ACAGUAU	ENSMUST00000107724.2|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000150884.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000107722.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000127713.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein
mm10_v2_chr17_+_79614900_79614900	1.35387	ACAGUAU	ENSMUST00000040368.2|Rmdn2|ENSMUSG00000036368.7|regulator of microtubule dynamics 2
mm10_v2_chr14_+_62837679_62837726	1.33787	ACAGUAU	ENSMUST00000014691.8|Wdfy2|ENSMUSG00000014547.9|WD repeat and FYVE domain containing 2
mm10_v2_chr12_+_4592992_4593087	1.31549	ACAGUAU	ENSMUST00000062580.7|Itsn2|ENSMUSG00000020640.9|intersectin 2
mm10_v2_chr13_-_104109576_104109619	1.29052	ACAGUAU	ENSMUST00000109315.3|Nln|ENSMUSG00000021710.10|neurolysin (metallopeptidase M3 family)
mm10_v2_chr10_-_20725023_20725078	1.28028	ACAGUAU	ENSMUST00000020165.7|Pde7b|ENSMUSG00000019990.8|phosphodiesterase 7B
mm10_v2_chr9_+_100643448_100643542	1.26717	ACAGUAU	ENSMUST00000146312.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1 	ENSMUST00000129269.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr6_-_4086914_4086972	1.1946	ACAGUAU	ENSMUST00000049166.4|Bet1|ENSMUSG00000032757.4|blocked early in transport 1 homolog (S. cerevisiae)
mm10_v2_chr17_-_64331817_64331957	1.18513	ACAGUAU	ENSMUST00000172733.1|Pja2|ENSMUSG00000024083.9|praja 2, RING-H2 motif containing 	ENSMUST00000172818.1|Pja2|ENSMUSG00000024083.9|praja 2, RING-H2 motif containing
mm10_v2_chr2_-_75704535_75704641	1.17296	ACAGUAU	ENSMUST00000102672.4|Nfe2l2|ENSMUSG00000015839.6|nuclear factor, erythroid derived 2, like 2
mm10_v2_chr13_+_43398375_43398402	1.15827	ACAGUAU	ENSMUST00000071926.3|Nol7|ENSMUSG00000063200.3|nucleolar protein 7
mm10_v2_chr3_+_16183177_16183206	1.15566	ACAGUAU	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr18_-_39490649_39490717	1.14268	ACAGUAU	ENSMUST00000115567.1|Nr3c1|ENSMUSG00000024431.8|nuclear receptor subfamily 3, group C, member 1
mm10_v2_chr6_+_52713729_52713800	1.14186	ACAGUAU	ENSMUST00000080723.4|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1 	ENSMUST00000149588.1|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1
mm10_v2_chr11_+_72607221_72607307	1.13249	ACAGUAU	ENSMUST00000021148.6|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1 	ENSMUST00000138247.1|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1
mm10_v2_chr13_-_85288999_85289058	1.13188	ACAGUAU	ENSMUST00000109552.2|Rasa1|ENSMUSG00000021549.7|RAS p21 protein activator 1
mm10_v2_chr6_-_35539765_35539888	1.12329	ACAGUAU	ENSMUST00000031866.5|Mtpn|ENSMUSG00000029840.5|myotrophin
mm10_v2_chr13_-_64274879_64274947	1.11725	ACAGUAU	ENSMUST00000109770.1|Cdc14b|ENSMUSG00000033102.8|CDC14 cell division cycle 14B
mm10_v2_chr10_+_57486354_57486414	1.09808	ACAGUAU	ENSMUST00000079833.4|Hsf2|ENSMUSG00000019878.7|heat shock factor 2
mm10_v2_chr15_+_68928414_68928421	1.09521	ACAGUAU	ENSMUST00000022954.6|Khdrbs3|ENSMUSG00000022332.7|KH domain containing, RNA binding, signal transduction associated 3
mm10_v2_chr6_+_95117740_95117880	1.06613	ACAGUAU	ENSMUST00000032107.7|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8 	ENSMUST00000119582.1|Kbtbd8|ENSMUSG00000030031.8|kelch repeat and BTB (POZ) domain containing 8
mm10_v2_chr13_+_55693082_55693151	1.04232	ACAGUAU	ENSMUST00000057844.8|B230219D22Rik|ENSMUSG00000045767.8|RIKEN cDNA B230219D22 gene
mm10_v2_chr2_-_155074447_155074502	1.02556	ACAGUAU	ENSMUST00000137242.1|Ahcy|ENSMUSG00000027597.9|S-adenosylhomocysteine hydrolase 	ENSMUST00000054607.9|Ahcy|ENSMUSG00000027597.9|S-adenosylhomocysteine hydrolase
mm10_v2_chr1_-_30949756_30949770	0.940045	ACAGUAU	ENSMUST00000076587.3|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1 	ENSMUST00000027232.7|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1
mm10_v2_chr5_+_43233463_43233491	0.936852	ACAGUAU	ENSMUST00000169035.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2 	ENSMUST00000166713.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2
mm10_v2_chr18_+_36281069_36281151	0.918889	ACAGUAU	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr14_-_72709986_72710027	0.888197	ACAGUAU	ENSMUST00000089017.5|Fndc3a|ENSMUSG00000033487.8|fibronectin type III domain containing 3A
mm10_v2_chr11_-_119547744_119547759	0.867166	ACAGUAU	ENSMUST00000026670.4|Nptx1|ENSMUSG00000025582.4|neuronal pentraxin 1
mm10_v2_chr2_+_31572701_31572725	0.84444	ACAGUAU	ENSMUST00000055244.6|Fubp3|ENSMUSG00000026843.9|far upstream element (FUSE) binding protein 3
mm10_v2_chr16_+_57121705_57121761	0.828273	ACAGUAU	ENSMUST00000166897.1|Tomm70a|ENSMUSG00000022752.8|translocase of outer mitochondrial membrane 70 homolog A (yeast)
mm10_v2_chr11_+_93886157_93886219	0.810835	ACAGUAU	ENSMUST00000063718.4|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1 	ENSMUST00000107854.2|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1
mm10_v2_chr10_+_41519493_41519516	0.802599	ACAGUAU	ENSMUST00000019962.8|Cd164|ENSMUSG00000019818.9|CD164 antigen
mm10_v2_chr2_-_116065798_116065853	0.798856	ACAGUAU	ENSMUST00000110907.1|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000110908.2|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr18_+_64340225_64340364	0.794762	ACAGUAU	ENSMUST00000175965.2|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2 	ENSMUST00000115145.3|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2
mm10_v2_chr14_+_73552665_73552776	0.784706	ACAGUAU	ENSMUST00000160507.1|Sucla2|ENSMUSG00000022110.7|succinate-Coenzyme A ligase, ADP-forming, beta subunit 	ENSMUST00000022706.6|Sucla2|ENSMUSG00000022110.7|succinate-Coenzyme A ligase, ADP-forming, beta subunit
mm10_v2_chr1_-_59237093_59237256	0.779105	ACAGUAU	ENSMUST00000163058.1|Als2|ENSMUSG00000026024.8|amyotrophic lateral sclerosis 2 (juvenile) 	ENSMUST00000027178.6|Als2|ENSMUSG00000026024.8|amyotrophic lateral sclerosis 2 (juvenile)
mm10_v2_chr3_-_108562349_108562466	0.7784	ACAGUAU	ENSMUST00000090546.5|Tmem167b|ENSMUSG00000068732.5|transmembrane protein 167B
mm10_v2_chr1_-_10232670_10232670	0.765933	ACAGUAU	ENSMUST00000088615.4|Arfgef1|ENSMUSG00000067851.5|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) 	ENSMUST00000131556.1|Arfgef1|ENSMUSG00000067851.5|ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)
mm10_v2_chr11_+_16752203_16752215	0.764576	ACAGUAU	ENSMUST00000102884.3|Egfr|ENSMUSG00000020122.10|epidermal growth factor receptor 	ENSMUST00000020329.6|Egfr|ENSMUSG00000020122.10|epidermal growth factor receptor
mm10_v2_chr5_+_76588663_76588742	0.758741	ACAGUAU	ENSMUST00000121979.1|Cep135|ENSMUSG00000036403.9|centrosomal protein 135
mm10_v2_chr7_-_44375006_44375035	0.752409	ACAGUAU	ENSMUST00000107933.1|1700008O03Rik|ENSMUSG00000008028.9|RIKEN cDNA 1700008O03 gene
mm10_v2_chr16_+_41532999_41533069	0.74376	ACAGUAU	ENSMUST00000099761.3|Lsamp|ENSMUSG00000061080.5|limbic system-associated membrane protein
mm10_v2_chr2_+_148681023_148681197	0.741204	ACAGUAU	ENSMUST00000028928.7|Gzf1|ENSMUSG00000027439.9|GDNF-inducible zinc finger protein 1
mm10_v2_chr5_+_16553488_16553550	0.738032	ACAGUAU	ENSMUST00000030683.3|Hgf|ENSMUSG00000028864.3|hepatocyte growth factor
mm10_v2_chr13_+_84222286_84222356	0.72206	ACAGUAU	ENSMUST00000057495.8|Tmem161b|ENSMUSG00000035762.10|transmembrane protein 161B
mm10_v2_chr2_-_23040177_23040241	0.701194	ACAGUAU	ENSMUST00000114544.3|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000139038.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000126112.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000178908.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000078977.7|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000140164.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1 	ENSMUST00000149719.1|Abi1|ENSMUSG00000058835.8|abl-interactor 1
mm10_v2_chr4_-_70534904_70534987	0.688005	ACAGUAU	ENSMUST00000107359.2|Megf9|ENSMUSG00000039270.3|multiple EGF-like-domains 9
mm10_v2_chr16_+_33380765_33380787	0.686982	ACAGUAU	ENSMUST00000165418.1|Zfp148|ENSMUSG00000022811.10|zinc finger protein 148
mm10_v2_chrX_-_142390334_142390345	0.64852	ACAGUAU	ENSMUST00000112907.1|Acsl4|ENSMUSG00000031278.6|acyl-CoA synthetase long-chain family member 4
mm10_v2_chr4_-_82859571_82859679	0.646658	ACAGUAU	ENSMUST00000156055.1|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21 	ENSMUST00000030110.8|Zdhhc21|ENSMUSG00000028403.9|zinc finger, DHHC domain containing 21
mm10_v2_chr17_-_80480435_80480462	0.638109	ACAGUAU	ENSMUST00000068714.5|Sos1|ENSMUSG00000024241.6|son of sevenless homolog 1 (Drosophila)
mm10_v2_chr19_+_48206025_48206163	0.635579	ACAGUAU	ENSMUST00000078880.5|Sorcs3|ENSMUSG00000063434.5|sortilin-related VPS10 domain containing receptor 3
mm10_v2_chr11_+_53350783_53350833	0.632362	ACAGUAU	ENSMUST00000060945.5|Aff4|ENSMUSG00000049470.7|AF4/FMR2 family, member 4
mm10_v2_chr15_-_53902472_53902530	0.629513	ACAGUAU	ENSMUST00000078673.6|Samd12|ENSMUSG00000058656.6|sterile alpha motif domain containing 12
mm10_v2_chrX_-_13846508_13846591	0.609912	ACAGUAU	ENSMUST00000115436.2|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000033321.4|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000115438.3|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm10_v2_chr2_-_84425258_84425411	0.603393	ACAGUAU	ENSMUST00000074262.2|Calcrl|ENSMUSG00000059588.7|calcitonin receptor-like
mm10_v2_chr10_+_88379217_88379299	0.597327	ACAGUAU	ENSMUST00000130301.1|Gnptab|ENSMUSG00000035311.10|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits 	ENSMUST00000020251.8|Gnptab|ENSMUSG00000035311.10|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
mm10_v2_chr10_+_98915117_98915172	0.594837	ACAGUAU	ENSMUST00000020107.7|Atp2b1|ENSMUSG00000019943.9|ATPase, Ca++ transporting, plasma membrane 1
mm10_v2_chr8_+_88199194_88199224	0.589539	ACAGUAU	ENSMUST00000119033.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000066748.3|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000118952.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5
mm10_v2_chr9_+_72662346_72662412	0.587364	ACAGUAU	ENSMUST00000034740.8|Nedd4|ENSMUSG00000032216.8|neural precursor cell expressed, developmentally down-regulated 4
mm10_v2_chr9_-_96752822_96752869	0.585813	ACAGUAU	ENSMUST00000152594.1|Zbtb38|ENSMUSG00000040433.10|zinc finger and BTB domain containing 38
mm10_v2_chr7_-_67372846_67372858	0.580981	ACAGUAU	ENSMUST00000156690.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000107476.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000076325.5|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000032776.8|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000133074.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A
mm10_v2_chr17_+_26414820_26414965	0.574786	ACAGUAU	ENSMUST00000182897.1|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila) 	ENSMUST00000183077.1|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila) 	ENSMUST00000053020.7|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila)
mm10_v2_chr17_-_22361400_22361400	0.573779	ACAGUAU	ENSMUST00000115535.2|Zfp944|ENSMUSG00000033972.9|zinc finger protein 944
mm10_v2_chr2_-_12301914_12301922	0.570561	ACAGUAU	ENSMUST00000028106.4|Itga8|ENSMUSG00000026768.4|integrin alpha 8
mm10_v2_chr2_+_166805506_166805605	0.567083	ACAGUAU	ENSMUST00000099078.3|Arfgef2|ENSMUSG00000074582.4|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
mm10_v2_chr9_-_52168111_52168111	0.56616	ACAGUAU	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chr1_+_58393119_58393147	0.563738	ACAGUAU	ENSMUST00000050552.8|Bzw1|ENSMUSG00000051223.8|basic leucine zipper and W2 domains 1
mm10_v2_chr6_-_148831448_148831494	0.559437	ACAGUAU	ENSMUST00000048418.7|Ipo8|ENSMUSG00000040029.8|importin 8
mm10_v2_chr9_-_106789130_106789213	0.55186	ACAGUAU	ENSMUST00000046502.5|Rad54l2|ENSMUSG00000040661.5|RAD54 like 2 (S. cerevisiae)
mm10_v2_chr9_-_75409352_75409383	0.547872	ACAGUAU	ENSMUST00000168937.1|Mapk6|ENSMUSG00000042688.10|mitogen-activated protein kinase 6
mm10_v2_chrX_-_38564519_38564555	0.539676	ACAGUAU	ENSMUST00000016681.8|Cul4b|ENSMUSG00000031095.9|cullin 4B
mm10_v2_chr12_+_64965742_64965775	0.537275	ACAGUAU	ENSMUST00000066296.7|Fam179b|ENSMUSG00000035614.10|family with sequence similarity 179, member B
mm10_v2_chr5_+_88886809_88886825	0.536459	ACAGUAU	ENSMUST00000148750.1|Slc4a4|ENSMUSG00000060961.8|solute carrier family 4 (anion exchanger), member 4
mm10_v2_chr4_+_54947976_54948054	0.535169	ACAGUAU	ENSMUST00000098070.3|Zfp462|ENSMUSG00000060206.5|zinc finger protein 462
mm10_v2_chr2_+_112379204_112379253	0.53031	ACAGUAU	ENSMUST00000028552.3|Katnbl1|ENSMUSG00000027132.3|katanin p80 subunit B like 1
mm10_v2_chr13_+_89540636_89540678	0.529738	ACAGUAU	ENSMUST00000022108.7|Hapln1|ENSMUSG00000021613.8|hyaluronan and proteoglycan link protein 1
mm10_v2_chr12_+_52516077_52516077	0.527859	ACAGUAU	ENSMUST00000110725.1|Arhgap5|ENSMUSG00000035133.8|Rho GTPase activating protein 5
mm10_v2_chr12_+_30884321_30884326	0.527761	ACAGUAU	ENSMUST00000067087.6|Fam150b|ENSMUSG00000054204.6|family with sequence similarity 150, member B
mm10_v2_chr18_+_38993126_38993186	0.523905	ACAGUAU	ENSMUST00000097593.2|Arhgap26|ENSMUSG00000036452.11|Rho GTPase activating protein 26
mm10_v2_chr10_-_111010001_111010066	0.515634	ACAGUAU	ENSMUST00000099285.3|Zdhhc17|ENSMUSG00000035798.7|zinc finger, DHHC domain containing 17 	ENSMUST00000041723.7|Zdhhc17|ENSMUSG00000035798.7|zinc finger, DHHC domain containing 17
mm10_v2_chr6_-_21851914_21852183	0.512791	ACAGUAU	ENSMUST00000134635.1|Tspan12|ENSMUSG00000029669.8|tetraspanin 12 	ENSMUST00000123116.1|Tspan12|ENSMUSG00000029669.8|tetraspanin 12 	ENSMUST00000120965.1|Tspan12|ENSMUSG00000029669.8|tetraspanin 12
mm10_v2_chr9_+_77754526_77754541	0.512105	ACAGUAU	ENSMUST00000034905.8|Gclc|ENSMUSG00000032350.8|glutamate-cysteine ligase, catalytic subunit
mm10_v2_chr3_+_38886940_38886940	0.511612	ACAGUAU	ENSMUST00000061260.7|Fat4|ENSMUSG00000046743.6|FAT tumor suppressor homolog 4 (Drosophila)
mm10_v2_chr11_-_85235065_85235137	0.505183	ACAGUAU	ENSMUST00000018625.9|Appbp2|ENSMUSG00000018481.9|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
mm10_v2_chr3_+_31095052_31095125	0.501221	ACAGUAU	ENSMUST00000118470.1|Skil|ENSMUSG00000027660.10|SKI-like 	ENSMUST00000029194.5|Skil|ENSMUSG00000027660.10|SKI-like 	ENSMUST00000123532.1|Skil|ENSMUSG00000027660.10|SKI-like 	ENSMUST00000117728.1|Skil|ENSMUSG00000027660.10|SKI-like
mm10_v2_chr6_+_17463749_17463809	0.499463	ACAGUAU	ENSMUST00000115443.1|Met|ENSMUSG00000009376.9|met proto-oncogene
mm10_v2_chr12_+_49382791_49382883	0.498571	ACAGUAU	ENSMUST00000179669.1|Foxg1|ENSMUSG00000020950.9|forkhead box G1
mm10_v2_chr15_+_99392882_99392903	0.496359	ACAGUAU	ENSMUST00000023749.8|Tmbim6|ENSMUSG00000023010.8|transmembrane BAX inhibitor motif containing 6
mm10_v2_chr14_+_14012491_14012693	0.494931	ACAGUAU	ENSMUST00000022257.2|Atxn7|ENSMUSG00000021738.4|ataxin 7
mm10_v2_chr5_+_146231211_146231385	0.489295	ACAGUAU	ENSMUST00000161181.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000161652.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000031640.8|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000159467.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8
mm10_v2_chr4_+_137862237_137862249	0.485922	ACAGUAU	ENSMUST00000102518.3|Ece1|ENSMUSG00000057530.8|endothelin converting enzyme 1
mm10_v2_chr4_+_57434247_57434368	0.47994	ACAGUAU	ENSMUST00000102905.1|Palm2|ENSMUSG00000090053.3|paralemmin 2
mm10_v2_chr6_-_28261907_28261943	0.468973	ACAGUAU	ENSMUST00000115320.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000123098.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000115321.2|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000155494.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800
mm10_v2_chr18_+_12972225_12972314	0.467391	ACAGUAU	ENSMUST00000025290.5|Impact|ENSMUSG00000024423.5|imprinted and ancient
mm10_v2_chrX_-_51018011_51018032	0.45823	ACAGUAU	ENSMUST00000053593.7|Rap2c|ENSMUSG00000050029.7|RAP2C, member of RAS oncogene family
mm10_v2_chr1_+_180726019_180726106	0.458094	ACAGUAU	ENSMUST00000027780.4|Acbd3|ENSMUSG00000026499.4|acyl-Coenzyme A binding domain containing 3
mm10_v2_chr9_-_94538075_94538089	0.456774	ACAGUAU	ENSMUST00000113028.1|1190002N15Rik|ENSMUSG00000045414.7|RIKEN cDNA 1190002N15 gene
mm10_v2_chr8_-_91313223_91313279	0.452116	ACAGUAU	ENSMUST00000047783.7|Rpgrip1l|ENSMUSG00000033282.7|Rpgrip1-like
mm10_v2_chr2_+_69897220_69897247	0.444545	ACAGUAU	ENSMUST00000055758.9|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3 	ENSMUST00000112251.2|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr9_-_70503718_70503805	0.441963	ACAGUAU	ENSMUST00000034739.5|Rnf111|ENSMUSG00000032217.6|ring finger 111
mm10_v2_chr5_-_98030727_98030765	0.441107	ACAGUAU	ENSMUST00000031281.9|Antxr2|ENSMUSG00000029338.9|anthrax toxin receptor 2
mm10_v2_chr10_+_3740348_3740430	0.43987	ACAGUAU	ENSMUST00000120274.1|Plekhg1|ENSMUSG00000040624.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
mm10_v2_chr13_+_75707484_75707510	0.438492	ACAGUAU	ENSMUST00000001583.6|Ell2|ENSMUSG00000001542.6|elongation factor RNA polymerase II 2
mm10_v2_chr13_+_92844750_92844790	0.426457	ACAGUAU	ENSMUST00000076169.3|Mtx3|ENSMUSG00000021704.7|metaxin 3
mm10_v2_chr6_+_83914353_83914411	0.423915	ACAGUAU	ENSMUST00000113835.3|Zfml|ENSMUSG00000030016.8|zinc finger, matrin-like 	ENSMUST00000032088.7|Zfml|ENSMUSG00000030016.8|zinc finger, matrin-like 	ENSMUST00000113836.3|Zfml|ENSMUSG00000030016.8|zinc finger, matrin-like
mm10_v2_chr8_-_89044162_89044195	0.419267	ACAGUAU	ENSMUST00000034090.6|Sall1|ENSMUSG00000031665.6|sal-like 1 (Drosophila)
mm10_v2_chrX_+_38316177_38316193	0.412373	ACAGUAU	ENSMUST00000016471.2|Atp1b4|ENSMUSG00000016327.3|ATPase, (Na+)/K+ transporting, beta 4 polypeptide 	ENSMUST00000115134.1|Atp1b4|ENSMUSG00000016327.3|ATPase, (Na+)/K+ transporting, beta 4 polypeptide
mm10_v2_chrX_-_108834303_108834381	0.408507	ACAGUAU	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chr1_-_190170671_190170744	0.408058	ACAGUAU	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr18_+_76944384_76944444	0.407811	ACAGUAU	ENSMUST00000156454.1|Hdhd2|ENSMUSG00000025421.8|haloacid dehalogenase-like hydrolase domain containing 2 	ENSMUST00000150990.1|Hdhd2|ENSMUSG00000025421.8|haloacid dehalogenase-like hydrolase domain containing 2 	ENSMUST00000026485.7|Hdhd2|ENSMUSG00000025421.8|haloacid dehalogenase-like hydrolase domain containing 2 	ENSMUST00000148955.1|Hdhd2|ENSMUSG00000025421.8|haloacid dehalogenase-like hydrolase domain containing 2
mm10_v2_chr16_-_11254268_11254303	0.400162	ACAGUAU	ENSMUST00000167571.1|Gspt1|ENSMUSG00000062203.8|G1 to S phase transition 1
mm10_v2_chr14_-_61439831_61439947	0.399421	ACAGUAU	ENSMUST00000022496.7|Kpna3|ENSMUSG00000021929.8|karyopherin (importin) alpha 3
mm10_v2_chr12_+_8674129_8674150	0.395006	ACAGUAU	ENSMUST00000111123.2|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000178015.1|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila) 	ENSMUST00000020915.3|Pum2|ENSMUSG00000020594.8|pumilio 2 (Drosophila)
mm10_v2_chr16_+_32608920_32608964	0.391442	ACAGUAU	ENSMUST00000023486.8|Tfrc|ENSMUSG00000022797.9|transferrin receptor
mm10_v2_chr2_-_102400863_102400970	0.391052	ACAGUAU	ENSMUST00000102573.1|Trim44|ENSMUSG00000027189.10|tripartite motif-containing 44
mm10_v2_chr5_-_37824580_37824584	0.387238	ACAGUAU	ENSMUST00000063116.9|Msx1|ENSMUSG00000048450.10|msh homeobox 1
mm10_v2_chr4_-_129672712_129672774	0.380306	ACAGUAU	ENSMUST00000102590.4|Kpna6|ENSMUSG00000003731.7|karyopherin (importin) alpha 6
mm10_v2_chr2_+_103566304_103566323	0.380076	ACAGUAU	ENSMUST00000076212.3|Abtb2|ENSMUSG00000032724.5|ankyrin repeat and BTB (POZ) domain containing 2
mm10_v2_chr19_+_21653302_21653320	0.378859	ACAGUAU	ENSMUST00000052556.3|Abhd17b|ENSMUSG00000047368.3|abhydrolase domain containing 17B
mm10_v2_chr5_+_72914264_72914304	0.376445	ACAGUAU	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr19_-_34879452_34879465	0.376162	ACAGUAU	ENSMUST00000036584.5|Pank1|ENSMUSG00000033610.9|pantothenate kinase 1
mm10_v2_chr6_+_113077354_113077382	0.375727	ACAGUAU	ENSMUST00000042889.5|Setd5|ENSMUSG00000034269.6|SET domain containing 5
mm10_v2_chr1_-_164458345_164458363	0.36964	ACAGUAU	ENSMUST00000027863.7|Atp1b1|ENSMUSG00000026576.7|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm10_v2_chr1_-_106796687_106796728	0.368985	ACAGUAU	ENSMUST00000094646.5|Vps4b|ENSMUSG00000009907.11|vacuolar protein sorting 4b (yeast)
mm10_v2_chr13_+_55209776_55209788	0.365829	ACAGUAU	ENSMUST00000099490.2|Nsd1|ENSMUSG00000021488.7|nuclear receptor-binding SET-domain protein 1
mm10_v2_chr14_-_18239053_18239127	0.357642	ACAGUAU	ENSMUST00000090543.5|Nr1d2|ENSMUSG00000021775.10|nuclear receptor subfamily 1, group D, member 2
mm10_v2_chr17_+_6106880_6106907	0.357433	ACAGUAU	ENSMUST00000149756.1|Tulp4|ENSMUSG00000034377.4|tubby like protein 4
mm10_v2_chr13_-_63565520_63565520	0.356135	ACAGUAU	ENSMUST00000021921.5|Ptch1|ENSMUSG00000021466.6|patched homolog 1
mm10_v2_chr9_+_70207342_70207356	0.356117	ACAGUAU	ENSMUST00000034745.7|Myo1e|ENSMUSG00000032220.9|myosin IE
mm10_v2_chr12_-_118301429_118301458	0.355399	ACAGUAU	ENSMUST00000026367.9|Sp4|ENSMUSG00000025323.9|trans-acting transcription factor 4
mm10_v2_chr3_-_113630068_113630149	0.353262	ACAGUAU	ENSMUST00000092154.3|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3 	ENSMUST00000106536.1|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3 	ENSMUST00000106535.1|Rnpc3|ENSMUSG00000027981.8|RNA-binding region (RNP1, RRM) containing 3
mm10_v2_chr3_-_84304762_84304809	0.350354	ACAGUAU	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr14_+_21499770_21499883	0.349824	ACAGUAU	ENSMUST00000182855.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000069648.7|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000182405.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B
mm10_v2_chr2_+_79635352_79635410	0.348888	ACAGUAU	ENSMUST00000111785.2|Ssfa2|ENSMUSG00000027007.10|sperm specific antigen 2
mm10_v2_chr9_-_121704996_121705041	0.342536	ACAGUAU	ENSMUST00000078547.4|Sec22c|ENSMUSG00000061536.6|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
mm10_v2_chr16_+_38089001_38089064	0.341899	ACAGUAU	ENSMUST00000023507.6|Gsk3b|ENSMUSG00000022812.7|glycogen synthase kinase 3 beta
mm10_v2_chr3_-_133544390_133544412	0.341164	ACAGUAU	ENSMUST00000098603.3|Tet2|ENSMUSG00000040943.8|tet methylcytosine dioxygenase 2
mm10_v2_chr5_-_143732273_143732316	0.331677	ACAGUAU	ENSMUST00000053287.5|Usp42|ENSMUSG00000051306.7|ubiquitin specific peptidase 42
mm10_v2_chrX_+_82948861_82948915	0.328988	ACAGUAU	ENSMUST00000114000.1|Dmd|ENSMUSG00000045103.11|dystrophin, muscular dystrophy
mm10_v2_chr4_-_149307506_149307703	0.321627	ACAGUAU	ENSMUST00000055647.8|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B 	ENSMUST00000030806.5|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B 	ENSMUST00000060537.6|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B
mm10_v2_chr1_-_176275274_176275308	0.321039	ACAGUAU	ENSMUST00000111166.1|Pld5|ENSMUSG00000055214.9|phospholipase D family, member 5 	ENSMUST00000065967.7|Pld5|ENSMUSG00000055214.9|phospholipase D family, member 5
mm10_v2_chr11_-_5381734_5381745	0.317999	ACAGUAU	ENSMUST00000172492.1|Znrf3|ENSMUSG00000041961.8|zinc and ring finger 3
mm10_v2_chr5_-_21055880_21055961	0.316095	ACAGUAU	ENSMUST00000030556.7|Ptpn12|ENSMUSG00000028771.7|protein tyrosine phosphatase, non-receptor type 12
mm10_v2_chr7_-_81454751_81454764	0.313007	ACAGUAU	ENSMUST00000098331.3|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1 	ENSMUST00000178892.1|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1
mm10_v2_chr10_-_68278713_68278735	0.310919	ACAGUAU	ENSMUST00000020106.7|Arid5b|ENSMUSG00000019947.9|AT rich interactive domain 5B (MRF1-like)
mm10_v2_chr13_-_107890059_107890073	0.308773	ACAGUAU	ENSMUST00000105097.2|Zswim6|ENSMUSG00000032846.9|zinc finger SWIM-type containing 6
mm10_v2_chr3_+_32529452_32529527	0.30611	ACAGUAU	ENSMUST00000091257.4|Mfn1|ENSMUSG00000027668.7|mitofusin 1
mm10_v2_chr9_+_72925622_72925671	0.302642	ACAGUAU	ENSMUST00000038489.5|Pygo1|ENSMUSG00000034910.5|pygopus 1
mm10_v2_chr7_-_70360593_70360746	0.300996	ACAGUAU	ENSMUST00000032768.7|Nr2f2|ENSMUSG00000030551.7|nuclear receptor subfamily 2, group F, member 2
mm10_v2_chr9_+_118506226_118506318	0.29934	ACAGUAU	ENSMUST00000084820.4|Golga4|ENSMUSG00000038708.9|golgi autoantigen, golgin subfamily a, 4
mm10_v2_chr1_+_133045984_133046082	0.291235	ACAGUAU	ENSMUST00000077730.5|Pik3c2b|ENSMUSG00000026447.10|phosphoinositide-3-kinase, class 2, beta polypeptide
mm10_v2_chr10_+_39732099_39732140	0.290102	ACAGUAU	ENSMUST00000019986.6|Rev3l|ENSMUSG00000019841.9|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm10_v2_chr19_+_32757497_32757587	0.285503	ACAGUAU	ENSMUST00000013807.7|Pten|ENSMUSG00000013663.7|phosphatase and tensin homolog
mm10_v2_chr13_+_9276477_9276620	0.28395	ACAGUAU	ENSMUST00000174552.1|Dip2c|ENSMUSG00000048264.9|DIP2 disco-interacting protein 2 homolog C (Drosophila)
mm10_v2_chrX_+_99975570_99975781	0.283938	ACAGUAU	ENSMUST00000113779.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113776.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113775.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113780.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113778.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113781.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113783.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000071453.2|Eda|ENSMUSG00000059327.3|ectodysplasin-A 	ENSMUST00000113777.1|Eda|ENSMUSG00000059327.3|ectodysplasin-A
mm10_v2_chr1_-_136960427_136960494	0.283735	ACAGUAU	ENSMUST00000027649.7|Nr5a2|ENSMUSG00000026398.8|nuclear receptor subfamily 5, group A, member 2
mm10_v2_chr18_+_5591860_5591902	0.283563	ACAGUAU	ENSMUST00000025081.5|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1 	ENSMUST00000159390.1|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1
mm10_v2_chr5_-_122779278_122779434	0.28211	ACAGUAU	ENSMUST00000111668.3|Camkk2|ENSMUSG00000029471.9|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm10_v2_chr16_+_13358375_13358439	0.282065	ACAGUAU	ENSMUST00000149359.1|Mkl2|ENSMUSG00000009569.8|MKL/myocardin-like 2
mm10_v2_chr12_-_34528844_34528904	0.281893	ACAGUAU	ENSMUST00000110819.2|Hdac9|ENSMUSG00000004698.9|histone deacetylase 9
mm10_v2_chr2_-_24919572_24919616	0.281797	ACAGUAU	ENSMUST00000046227.5|Ehmt1|ENSMUSG00000036893.10|euchromatic histone methyltransferase 1 	ENSMUST00000114432.2|Ehmt1|ENSMUSG00000036893.10|euchromatic histone methyltransferase 1 	ENSMUST00000091348.4|Ehmt1|ENSMUSG00000036893.10|euchromatic histone methyltransferase 1 	ENSMUST00000150379.1|Ehmt1|ENSMUSG00000036893.10|euchromatic histone methyltransferase 1 	ENSMUST00000152161.1|Ehmt1|ENSMUSG00000036893.10|euchromatic histone methyltransferase 1 	ENSMUST00000102938.3|Ehmt1|ENSMUSG00000036893.10|euchromatic histone methyltransferase 1
mm10_v2_chr14_-_46822232_46822266	0.28157	ACAGUAU	ENSMUST00000111817.1|Gmfb|ENSMUSG00000062014.6|glia maturation factor, beta 	ENSMUST00000079314.5|Gmfb|ENSMUSG00000062014.6|glia maturation factor, beta
mm10_v2_chr1_+_60409612_60409648	0.281204	ACAGUAU	ENSMUST00000052332.8|Abi2|ENSMUSG00000026782.9|abl-interactor 2
mm10_v2_chr1_-_78197112_78197134	0.280485	ACAGUAU	ENSMUST00000087086.6|Pax3|ENSMUSG00000004872.9|paired box gene 3
mm10_v2_chr9_+_13827708_13827781	0.278881	ACAGUAU	ENSMUST00000059579.5|Fam76b|ENSMUSG00000037808.6|family with sequence similarity 76, member B
mm10_v2_chr18_-_24020749_24020813	0.27813	ACAGUAU	ENSMUST00000066497.5|Zfp191|ENSMUSG00000051469.8|zinc finger protein 191
mm10_v2_chr8_+_95352258_95352329	0.277338	ACAGUAU	ENSMUST00000034243.5|Mmp15|ENSMUSG00000031790.7|matrix metallopeptidase 15
mm10_v2_chr16_-_85173692_85173718	0.277229	ACAGUAU	ENSMUST00000005406.10|App|ENSMUSG00000022892.10|amyloid beta (A4) precursor protein
mm10_v2_chr9_-_31211805_31211824	0.272784	ACAGUAU	ENSMUST00000072634.7|Aplp2|ENSMUSG00000031996.10|amyloid beta (A4) precursor-like protein 2 	ENSMUST00000079758.7|Aplp2|ENSMUSG00000031996.10|amyloid beta (A4) precursor-like protein 2
mm10_v2_chr12_-_51691883_51691925	0.272534	ACAGUAU	ENSMUST00000013130.8|Strn3|ENSMUSG00000020954.9|striatin, calmodulin binding protein 3 	ENSMUST00000169503.1|Strn3|ENSMUSG00000020954.9|striatin, calmodulin binding protein 3
mm10_v2_chr3_+_157534351_157534411	0.272035	ACAGUAU	ENSMUST00000029831.9|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2 	ENSMUST00000106057.1|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2 	ENSMUST00000106063.2|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2
mm10_v2_chr2_+_69722797_69722840	0.270767	ACAGUAU	ENSMUST00000090858.3|Ppig|ENSMUSG00000042133.10|peptidyl-prolyl isomerase G (cyclophilin G)
mm10_v2_chr4_+_11156411_11156453	0.270388	ACAGUAU	ENSMUST00000029865.3|Trp53inp1|ENSMUSG00000028211.5|transformation related protein 53 inducible nuclear protein 1
mm10_v2_chr12_+_95692212_95692246	0.268633	ACAGUAU	ENSMUST00000057324.3|Flrt2|ENSMUSG00000047414.6|fibronectin leucine rich transmembrane protein 2
mm10_v2_chr19_-_41263931_41264008	0.268503	ACAGUAU	ENSMUST00000025989.8|Tm9sf3|ENSMUSG00000025016.10|transmembrane 9 superfamily member 3
mm10_v2_chr14_+_120275669_120275714	0.268374	ACAGUAU	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chr18_-_47368830_47368878	0.267489	ACAGUAU	ENSMUST00000019791.7|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000115449.2|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr1_+_55131231_55131249	0.266186	ACAGUAU	ENSMUST00000162364.1|Mob4|ENSMUSG00000025979.7|MOB family member 4, phocein 	ENSMUST00000159311.1|Mob4|ENSMUSG00000025979.7|MOB family member 4, phocein
mm10_v2_chr17_+_26715644_26715724	0.266099	ACAGUAU	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr7_+_100706702_100706731	0.261854	ACAGUAU	ENSMUST00000049053.7|Fam168a|ENSMUSG00000029461.9|family with sequence similarity 168, member A
mm10_v2_chr16_+_21891969_21891969	0.259674	ACAGUAU	ENSMUST00000042065.6|Map3k13|ENSMUSG00000033618.6|mitogen-activated protein kinase kinase kinase 13
mm10_v2_chr7_+_89404356_89404367	0.257104	ACAGUAU	ENSMUST00000058755.3|Fzd4|ENSMUSG00000049791.3|frizzled homolog 4 (Drosophila)
mm10_v2_chr13_+_48261427_48261427	0.255537	ACAGUAU	ENSMUST00000021810.1|Id4|ENSMUSG00000021379.1|inhibitor of DNA binding 4
mm10_v2_chr17_+_86167777_86167795	0.254317	ACAGUAU	ENSMUST00000097275.2|Prkce|ENSMUSG00000045038.8|protein kinase C, epsilon
mm10_v2_chr6_+_97807014_97807067	0.254142	ACAGUAU	ENSMUST00000043637.7|Mitf|ENSMUSG00000035158.9|microphthalmia-associated transcription factor
mm10_v2_chr1_-_79671966_79671993	0.253576	ACAGUAU	ENSMUST00000162342.1|Ap1s3|ENSMUSG00000054702.8|adaptor-related protein complex AP-1, sigma 3
mm10_v2_chr10_-_58675631_58675654	0.250612	ACAGUAU	ENSMUST00000003312.4|Edar|ENSMUSG00000003227.4|ectodysplasin-A receptor
mm10_v2_chr2_+_60209887_60210073	0.247477	ACAGUAU	ENSMUST00000102748.4|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7 	ENSMUST00000102747.1|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7
mm10_v2_chr2_+_117121374_117121374	0.245318	ACAGUAU	ENSMUST00000028829.6|Spred1|ENSMUSG00000027351.8|sprouty protein with EVH-1 domain 1, related sequence
mm10_v2_chr9_+_59750876_59750918	0.244566	ACAGUAU	ENSMUST00000136740.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000135298.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000128341.1|Myo9a|ENSMUSG00000039585.9|myosin IXa
mm10_v2_chr16_-_46496955_46496986	0.244264	ACAGUAU	ENSMUST00000023335.6|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3 	ENSMUST00000023334.8|Pvrl3|ENSMUSG00000022656.9|poliovirus receptor-related 3
mm10_v2_chr5_-_20882072_20882124	0.239107	ACAGUAU	ENSMUST00000118174.1|Phtf2|ENSMUSG00000039987.9|putative homeodomain transcription factor 2
mm10_v2_chr12_+_4917376_4917438	0.238595	ACAGUAU	ENSMUST00000045664.5|Atad2b|ENSMUSG00000052812.4|ATPase family, AAA domain containing 2B
mm10_v2_chr1_-_165934900_165935036	0.237485	ACAGUAU	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr16_-_45844303_45844381	0.236332	ACAGUAU	ENSMUST00000036355.6|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chr5_-_69592311_69592337	0.236066	ACAGUAU	ENSMUST00000031117.6|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2
mm10_v2_chr10_-_7956223_7956271	0.235979	ACAGUAU	ENSMUST00000146444.1|Tab2|ENSMUSG00000015755.10|TGF-beta activated kinase 1/MAP3K7 binding protein 2
mm10_v2_chr2_-_132145057_132145118	0.235514	ACAGUAU	ENSMUST00000028815.8|Slc23a2|ENSMUSG00000027340.9|solute carrier family 23 (nucleobase transporters), member 2
mm10_v2_chr12_+_83632208_83632325	0.232488	ACAGUAU	ENSMUST00000048155.9|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182618.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000183154.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182036.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25 	ENSMUST00000182347.1|Rbm25|ENSMUSG00000010608.9|RNA binding motif protein 25
mm10_v2_chr15_+_66577536_66577637	0.232412	ACAGUAU	ENSMUST00000048188.8|Phf20l1|ENSMUSG00000072501.4|PHD finger protein 20-like 1
mm10_v2_chr3_-_105801323_105801377	0.230968	ACAGUAU	ENSMUST00000090678.6|Rap1a|ENSMUSG00000068798.6|RAS-related protein-1a
mm10_v2_chr17_-_10319324_10319380	0.229613	ACAGUAU	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr17_-_46831413_46831413	0.225045	ACAGUAU	ENSMUST00000040624.5|Gltscr1l|ENSMUSG00000036568.6|GLTSCR1-like
mm10_v2_chr7_+_49246812_49246844	0.224943	ACAGUAU	ENSMUST00000184945.1|Nav2|ENSMUSG00000052512.9|neuron navigator 2
mm10_v2_chr19_+_26605106_26605119	0.224836	ACAGUAU	ENSMUST00000025862.7|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENSMUST00000176030.1|Smarca2|ENSMUSG00000024921.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm10_v2_chr3_-_116424007_116424032	0.220192	ACAGUAU	ENSMUST00000090464.4|Cdc14a|ENSMUSG00000033502.8|CDC14 cell division cycle 14A
mm10_v2_chr8_-_80739497_80739497	0.21934	ACAGUAU	ENSMUST00000043359.8|Smarca5|ENSMUSG00000031715.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
mm10_v2_chr11_-_61579637_61579707	0.217637	ACAGUAU	ENSMUST00000147501.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000146455.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108711.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108712.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000001063.8|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108713.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000179936.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000178202.1|Epn2|ENSMUSG00000001036.11|epsin 2
mm10_v2_chr6_-_126645784_126645801	0.217325	ACAGUAU	ENSMUST00000055168.3|Kcna1|ENSMUSG00000047976.3|potassium voltage-gated channel, shaker-related subfamily, member 1
mm10_v2_chr18_-_10610124_10610144	0.215469	ACAGUAU	ENSMUST00000097670.3|Esco1|ENSMUSG00000024293.9|establishment of cohesion 1 homolog 1 (S. cerevisiae)
mm10_v2_chr7_-_111082997_111083037	0.214523	ACAGUAU	ENSMUST00000161051.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000160132.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000106666.3|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2 	ENSMUST00000162415.1|Eif4g2|ENSMUSG00000005610.10|eukaryotic translation initiation factor 4, gamma 2
mm10_v2_chr14_+_18271122_18271186	0.214137	ACAGUAU	ENSMUST00000132374.1|Nkiras1|ENSMUSG00000021772.8|NFKB inhibitor interacting Ras-like protein 1 	ENSMUST00000133460.1|Nkiras1|ENSMUSG00000021772.8|NFKB inhibitor interacting Ras-like protein 1
mm10_v2_chr17_+_13760502_13760674	0.211489	ACAGUAU	ENSMUST00000139347.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000156591.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000170827.2|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000139666.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000137784.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000137708.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENSMUST00000150848.1|Mllt4|ENSMUSG00000068036.8|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
mm10_v2_chr18_-_46525940_46525999	0.209335	ACAGUAU	ENSMUST00000036226.5|Fem1c|ENSMUSG00000033319.5|fem-1 homolog c (C.elegans)
mm10_v2_chr14_-_100149764_100149764	0.207466	ACAGUAU	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chrX_-_105929397_105929408	0.207058	ACAGUAU	ENSMUST00000113573.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human) 	ENSMUST00000130980.1|Atrx|ENSMUSG00000031229.10|alpha thalassemia/mental retardation syndrome X-linked homolog (human)
mm10_v2_chrX_-_157598656_157598715	0.205723	ACAGUAU	ENSMUST00000149249.1|Mbtps2|ENSMUSG00000046873.12|membrane-bound transcription factor peptidase, site 2 	ENSMUST00000058098.8|Mbtps2|ENSMUSG00000046873.12|membrane-bound transcription factor peptidase, site 2
mm10_v2_chr6_-_138043411_138043411	0.204845	ACAGUAU	ENSMUST00000111873.1|Slc15a5|ENSMUSG00000044378.6|solute carrier family 15, member 5
mm10_v2_chr1_+_177444653_177444669	0.203298	ACAGUAU	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr4_+_19605451_19605451	0.200581	ACAGUAU	ENSMUST00000108250.2|Gm12353|ENSMUSG00000078772.2|predicted gene 12353
mm10_v2_chr2_-_26092149_26092177	0.199191	ACAGUAU	ENSMUST00000114159.2|Nacc2|ENSMUSG00000026932.8|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm10_v2_chr3_-_108146080_108146150	0.19711	ACAGUAU	ENSMUST00000000001.4|Gnai3|ENSMUSG00000000001.4|guanine nucleotide binding protein (G protein), alpha inhibiting 3
mm10_v2_chr12_-_14152038_14152069	0.196631	ACAGUAU	ENSMUST00000020926.6|Fam84a|ENSMUSG00000020607.6|family with sequence similarity 84, member A
mm10_v2_chr13_+_14063776_14063822	0.196382	ACAGUAU	ENSMUST00000129488.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110536.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110534.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000039538.8|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110533.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like)
mm10_v2_chr9_+_72532214_72532271	0.195486	ACAGUAU	ENSMUST00000163401.2|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7 	ENSMUST00000093820.3|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7
mm10_v2_chr12_-_91849081_91849157	0.191429	ACAGUAU	ENSMUST00000167466.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000021347.5|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans) 	ENSMUST00000178462.1|Sel1l|ENSMUSG00000020964.8|sel-1 suppressor of lin-12-like (C. elegans)
mm10_v2_chr8_+_91070052_91070123	0.189056	ACAGUAU	ENSMUST00000034091.7|Rbl2|ENSMUSG00000031666.8|retinoblastoma-like 2
mm10_v2_chr8_-_36613937_36613948	0.188556	ACAGUAU	ENSMUST00000033923.7|Dlc1|ENSMUSG00000031523.10|deleted in liver cancer 1
mm10_v2_chr8_+_108714644_108714644	0.187602	ACAGUAU	ENSMUST00000043896.8|Zfhx3|ENSMUSG00000038872.8|zinc finger homeobox 3
mm10_v2_chr15_+_85735754_85735808	0.186471	ACAGUAU	ENSMUST00000109422.1|Ppara|ENSMUSG00000022383.7|peroxisome proliferator activated receptor alpha
mm10_v2_chrX_-_12762069_12762080	0.185364	ACAGUAU	ENSMUST00000096495.4|Med14|ENSMUSG00000064127.7|mediator complex subunit 14 	ENSMUST00000076016.5|Med14|ENSMUSG00000064127.7|mediator complex subunit 14
mm10_v2_chr11_-_6475992_6476102	0.18517	ACAGUAU	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr10_-_95416850_95416861	0.179986	ACAGUAU	ENSMUST00000020215.9|Socs2|ENSMUSG00000020027.12|suppressor of cytokine signaling 2
mm10_v2_chr12_-_110696332_110696418	0.177987	ACAGUAU	ENSMUST00000094361.4|Hsp90aa1|ENSMUSG00000021270.7|heat shock protein 90, alpha (cytosolic), class A member 1
mm10_v2_chr5_-_66173051_66173117	0.177181	ACAGUAU	ENSMUST00000113726.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47
mm10_v2_chr7_+_112023469_112023566	0.176393	ACAGUAU	ENSMUST00000106653.2|Usp47|ENSMUSG00000059263.7|ubiquitin specific peptidase 47
mm10_v2_chr2_+_138256530_138256615	0.17478	ACAGUAU	ENSMUST00000091556.5|Btbd3|ENSMUSG00000062098.5|BTB (POZ) domain containing 3
mm10_v2_chr4_+_116877376_116877453	0.174268	ACAGUAU	ENSMUST00000044823.3|Zswim5|ENSMUSG00000033948.3|zinc finger SWIM-type containing 5
mm10_v2_chr2_+_160645881_160645896	0.173473	ACAGUAU	ENSMUST00000109468.2|Top1|ENSMUSG00000070544.6|topoisomerase (DNA) I
mm10_v2_chr7_-_98656530_98656600	0.17051	ACAGUAU	ENSMUST00000038359.4|2210018M11Rik|ENSMUSG00000035401.8|RIKEN cDNA 2210018M11 gene
mm10_v2_chr1_-_162740350_162740533	0.170168	ACAGUAU	ENSMUST00000182331.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000183011.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000182593.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C 	ENSMUST00000182149.1|Prrc2c|ENSMUSG00000040225.9|proline-rich coiled-coil 2C
mm10_v2_chr13_-_45964964_45965001	0.169758	ACAGUAU	ENSMUST00000180110.1|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000091628.3|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000167708.2|Atxn1|ENSMUSG00000046876.9|ataxin 1
mm10_v2_chr14_+_54883377_54883507	0.168842	ACAGUAU	ENSMUST00000022806.3|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000134077.1|Gm20521|ENSMUSG00000092232.1|predicted gene 20521 	ENSMUST00000172844.1|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2 	ENSMUST00000133397.2|Bcl2l2|ENSMUSG00000089682.3|BCL2-like 2
mm10_v2_chr11_+_57801575_57801649	0.167589	ACAGUAU	ENSMUST00000020826.5|Sap30l|ENSMUSG00000020519.5|SAP30-like
mm10_v2_chr3_-_49757257_49757316	0.167338	ACAGUAU	ENSMUST00000035931.7|Pcdh18|ENSMUSG00000037892.8|protocadherin 18
mm10_v2_chr10_+_95940663_95940703	0.166847	ACAGUAU	ENSMUST00000053484.6|Eea1|ENSMUSG00000036499.8|early endosome antigen 1
mm10_v2_chr17_-_12318660_12318684	0.16608	ACAGUAU	ENSMUST00000089058.5|Map3k4|ENSMUSG00000014426.8|mitogen-activated protein kinase kinase kinase 4
mm10_v2_chr1_+_65186727_65186750	0.164207	ACAGUAU	ENSMUST00000097707.4|Pikfyve|ENSMUSG00000025949.9|phosphoinositide kinase, FYVE finger containing 	ENSMUST00000081154.7|Pikfyve|ENSMUSG00000025949.9|phosphoinositide kinase, FYVE finger containing
mm10_v2_chr7_+_64501687_64501706	0.163646	ACAGUAU	ENSMUST00000032732.8|Apba2|ENSMUSG00000030519.8|amyloid beta (A4) precursor protein-binding, family A, member 2
mm10_v2_chr15_-_58823530_58823581	0.16203	ACAGUAU	ENSMUST00000072113.5|Tmem65|ENSMUSG00000062373.7|transmembrane protein 65
mm10_v2_chr8_+_94386438_94386468	0.160133	ACAGUAU	ENSMUST00000161576.1|Herpud1|ENSMUSG00000031770.9|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
mm10_v2_chr12_+_111538101_111538243	0.15851	ACAGUAU	ENSMUST00000166123.1|Eif5|ENSMUSG00000021282.10|eukaryotic translation initiation factor 5
mm10_v2_chr14_-_103099499_103099554	0.157685	ACAGUAU	ENSMUST00000022720.8|Fbxl3|ENSMUSG00000022124.8|F-box and leucine-rich repeat protein 3
mm10_v2_chr11_-_86357570_86357614	0.157522	ACAGUAU	ENSMUST00000043624.8|Med13|ENSMUSG00000034297.8|mediator complex subunit 13
mm10_v2_chr9_+_32696005_32696121	0.155661	ACAGUAU	ENSMUST00000034534.6|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000050797.7|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000184887.1|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain
mm10_v2_chrX_+_137049586_137049654	0.151371	ACAGUAU	ENSMUST00000047852.7|Fam199x|ENSMUSG00000042595.7|family with sequence similarity 199, X-linked
mm10_v2_chr3_-_104511812_104511933	0.149904	ACAGUAU	ENSMUST00000046316.6|Lrig2|ENSMUSG00000032913.9|leucine-rich repeats and immunoglobulin-like domains 2
mm10_v2_chr6_+_116264186_116264225	0.149125	ACAGUAU	ENSMUST00000036503.7|Zfand4|ENSMUSG00000042213.10|zinc finger, AN1-type domain 4 	ENSMUST00000112900.3|Zfand4|ENSMUSG00000042213.10|zinc finger, AN1-type domain 4
mm10_v2_chr4_+_47353222_47353265	0.14813	ACAGUAU	ENSMUST00000007757.8|Tgfbr1|ENSMUSG00000007613.9|transforming growth factor, beta receptor I
mm10_v2_chr4_+_122995944_122995958	0.148123	ACAGUAU	ENSMUST00000106252.2|Mycl|ENSMUSG00000028654.7|v-myc myelocytomatosis viral oncogene homolog, lung carcinoma derived (avian)
mm10_v2_chr19_-_17837620_17837642	0.147386	ACAGUAU	ENSMUST00000025618.8|Pcsk5|ENSMUSG00000024713.9|proprotein convertase subtilisin/kexin type 5 	ENSMUST00000050715.8|Pcsk5|ENSMUSG00000024713.9|proprotein convertase subtilisin/kexin type 5
mm10_v2_chr2_-_64097994_64098023	0.144826	ACAGUAU	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr18_+_57878620_57878678	0.143078	ACAGUAU	ENSMUST00000115366.2|Slc12a2|ENSMUSG00000024597.10|solute carrier family 12, member 2
mm10_v2_chr1_+_164249023_164249051	0.13928	ACAGUAU	ENSMUST00000044021.5|Slc19a2|ENSMUSG00000040918.6|solute carrier family 19 (thiamine transporter), member 2
mm10_v2_chr1_+_127204986_127205051	0.138803	ACAGUAU	ENSMUST00000038361.4|Mgat5|ENSMUSG00000036155.7|mannoside acetylglucosaminyltransferase 5
mm10_v2_chr4_-_53159885_53159900	0.137758	ACAGUAU	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chrX_+_68678541_68678554	0.136802	ACAGUAU	ENSMUST00000088546.5|Fmr1|ENSMUSG00000000838.11|fragile X mental retardation syndrome 1
mm10_v2_chr2_+_155381808_155381884	0.135899	ACAGUAU	ENSMUST00000043237.7|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2 	ENSMUST00000174685.1|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2
mm10_v2_chr9_+_114731177_114731234	0.135137	ACAGUAU	ENSMUST00000035007.8|Cmtm6|ENSMUSG00000032434.8|CKLF-like MARVEL transmembrane domain containing 6
mm10_v2_chr17_-_66077022_66077081	0.134696	ACAGUAU	ENSMUST00000150766.1|Ankrd12|ENSMUSG00000034647.8|ankyrin repeat domain 12 	ENSMUST00000038116.5|Ankrd12|ENSMUSG00000034647.8|ankyrin repeat domain 12
mm10_v2_chr2_-_48949206_48949276	0.133023	ACAGUAU	ENSMUST00000090976.3|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000149679.1|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000028098.4|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4
mm10_v2_chr8_-_111259192_111259221	0.128648	ACAGUAU	ENSMUST00000169020.1|Glg1|ENSMUSG00000003316.8|golgi apparatus protein 1 	ENSMUST00000003404.8|Glg1|ENSMUSG00000003316.8|golgi apparatus protein 1
mm10_v2_chr8_-_122974793_122974793	0.127176	ACAGUAU	ENSMUST00000098334.5|Ankrd11|ENSMUSG00000035569.10|ankyrin repeat domain 11
mm10_v2_chr8_-_81014866_81014942	0.127026	ACAGUAU	ENSMUST00000042724.6|Usp38|ENSMUSG00000038250.8|ubiquitin specific peptidase 38
mm10_v2_chr12_+_117516479_117516534	0.125804	ACAGUAU	ENSMUST00000109691.2|Rapgef5|ENSMUSG00000041992.8|Rap guanine nucleotide exchange factor (GEF) 5
mm10_v2_chr5_+_15934685_15934696	0.125004	ACAGUAU	ENSMUST00000078272.6|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000180204.1|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000167946.2|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000101581.3|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1 	ENSMUST00000039370.7|Cacna2d1|ENSMUSG00000040118.9|calcium channel, voltage-dependent, alpha2/delta subunit 1
mm10_v2_chr6_+_21949571_21949683	0.123133	ACAGUAU	ENSMUST00000031680.3|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3 	ENSMUST00000115389.1|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3 	ENSMUST00000151473.1|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3
mm10_v2_chr1_-_82291370_82291416	0.121405	ACAGUAU	ENSMUST00000069799.2|Irs1|ENSMUSG00000055980.2|insulin receptor substrate 1
mm10_v2_chr3_+_60501252_60501275	0.120965	ACAGUAU	ENSMUST00000099087.2|Mbnl1|ENSMUSG00000027763.8|muscleblind-like 1 (Drosophila)
mm10_v2_chr9_+_35211155_35211224	0.120114	ACAGUAU	ENSMUST00000034541.5|Srpr|ENSMUSG00000032042.5|signal recognition particle receptor ('docking protein')
mm10_v2_chr1_+_60746358_60746427	0.118898	ACAGUAU	ENSMUST00000027165.2|Cd28|ENSMUSG00000026012.2|CD28 antigen
mm10_v2_chr12_-_75596195_75596261	0.118617	ACAGUAU	ENSMUST00000021447.7|Ppp2r5e|ENSMUSG00000021051.9|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform
mm10_v2_chr9_-_107231816_107231909	0.118515	ACAGUAU	ENSMUST00000044532.4|Dock3|ENSMUSG00000039716.6|dedicator of cyto-kinesis 3
mm10_v2_chr5_+_129941949_129942113	0.118319	ACAGUAU	ENSMUST00000051758.7|Vkorc1l1|ENSMUSG00000066735.5|vitamin K epoxide reductase complex, subunit 1-like 1 	ENSMUST00000073945.4|Vkorc1l1|ENSMUSG00000066735.5|vitamin K epoxide reductase complex, subunit 1-like 1
mm10_v2_chr7_-_84151868_84151938	0.118301	ACAGUAU	ENSMUST00000117085.1|Abhd17c|ENSMUSG00000038459.9|abhydrolase domain containing 17C
mm10_v2_chr5_+_108268897_108268924	0.117277	ACAGUAU	ENSMUST00000031190.4|Dr1|ENSMUSG00000029265.4|down-regulator of transcription 1
mm10_v2_chr1_-_136346074_136346145	0.115907	ACAGUAU	ENSMUST00000048309.6|Camsap2|ENSMUSG00000041570.9|calmodulin regulated spectrin-associated protein family, member 2
mm10_v2_chr1_-_58586191_58586323	0.114562	ACAGUAU	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr18_-_4352944_4352962	0.112018	ACAGUAU	ENSMUST00000025078.2|Map3k8|ENSMUSG00000024235.4|mitogen-activated protein kinase kinase kinase 8
mm10_v2_chr5_+_107830244_107830259	0.111471	ACAGUAU	ENSMUST00000072578.6|Ube2d2b|ENSMUSG00000063447.6|ubiquitin-conjugating enzyme E2D 2B
mm10_v2_chr13_-_93499803_93499825	0.110379	ACAGUAU	ENSMUST00000065537.7|Jmy|ENSMUSG00000021690.9|junction-mediating and regulatory protein
mm10_v2_chr8_+_12395287_12395295	0.109354	ACAGUAU	ENSMUST00000180353.1|Sox1|ENSMUSG00000096014.1|SRY-box containing gene 1
mm10_v2_chr10_+_25359798_25359844	0.108933	ACAGUAU	ENSMUST00000053748.8|Epb4.1l2|ENSMUSG00000019978.9|erythrocyte protein band 4.1-like 2
mm10_v2_chr16_-_50432340_50432409	0.106225	ACAGUAU	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr8_+_26158186_26158252	0.106194	ACAGUAU	ENSMUST00000036807.5|Thap1|ENSMUSG00000037214.5|THAP domain containing, apoptosis associated protein 1 	ENSMUST00000130231.1|Thap1|ENSMUSG00000037214.5|THAP domain containing, apoptosis associated protein 1
mm10_v2_chr12_+_78748947_78748971	0.105377	ACAGUAU	ENSMUST00000082024.5|Mpp5|ENSMUSG00000021112.8|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
mm10_v2_chr16_+_57353093_57353117	0.10494	ACAGUAU	ENSMUST00000159816.1|Filip1l|ENSMUSG00000043336.8|filamin A interacting protein 1-like
mm10_v2_chr6_+_8948608_8948619	0.102697	ACAGUAU	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr16_+_70313949_70314016	0.102496	ACAGUAU	ENSMUST00000163832.1|Gbe1|ENSMUSG00000022707.10|glucan (1,4-alpha-), branching enzyme 1
mm10_v2_chr2_+_59612034_59612109	0.102471	ACAGUAU	ENSMUST00000112568.1|Tanc1|ENSMUSG00000035168.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 	ENSMUST00000037526.4|Tanc1|ENSMUSG00000035168.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
mm10_v2_chr13_+_37826225_37826315	0.102199	ACAGUAU	ENSMUST00000128570.1|Rreb1|ENSMUSG00000039087.10|ras responsive element binding protein 1
mm10_v2_chr15_+_39006272_39006365	0.100338	ACAGUAU	ENSMUST00000179165.1|Fzd6|ENSMUSG00000022297.8|frizzled homolog 6 (Drosophila) 	ENSMUST00000022906.7|Fzd6|ENSMUSG00000022297.8|frizzled homolog 6 (Drosophila)
mm10_v2_chrX_+_18162575_18162657	0.0975768	ACAGUAU	ENSMUST00000044484.6|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A 	ENSMUST00000052368.8|Kdm6a|ENSMUSG00000037369.10|lysine (K)-specific demethylase 6A
mm10_v2_chr2_+_112454997_112455063	0.0951404	ACAGUAU	ENSMUST00000069747.5|Emc7|ENSMUSG00000055943.5|ER membrane protein complex subunit 7
mm10_v2_chr12_+_16894894_16894978	0.0938313	ACAGUAU	ENSMUST00000020904.6|Rock2|ENSMUSG00000020580.9|Rho-associated coiled-coil containing protein kinase 2
mm10_v2_chr8_+_104101625_104101650	0.0915537	ACAGUAU	ENSMUST00000034339.8|Cdh5|ENSMUSG00000031871.8|cadherin 5
mm10_v2_chr13_+_24801657_24801657	0.0873538	ACAGUAU	ENSMUST00000019276.4|BC005537|ENSMUSG00000019132.4|cDNA sequence BC005537
mm10_v2_chr1_+_105990384_105990498	0.0871544	ACAGUAU	ENSMUST00000119166.1|Zcchc2|ENSMUSG00000038866.9|zinc finger, CCHC domain containing 2
mm10_v2_chr1_-_158958367_158958367	0.0869258	ACAGUAU	ENSMUST00000159861.2|Pappa2|ENSMUSG00000073530.5|pappalysin 2
mm10_v2_chr9_+_68653761_68653786	0.0869165	ACAGUAU	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
mm10_v2_chr15_+_96287518_96287604	0.0867721	ACAGUAU	ENSMUST00000134985.2|Arid2|ENSMUSG00000033237.12|AT rich interactive domain 2 (ARID, RFX-like) 	ENSMUST00000096250.4|Arid2|ENSMUSG00000033237.12|AT rich interactive domain 2 (ARID, RFX-like)
mm10_v2_chr19_-_47464406_47464450	0.0865802	ACAGUAU	ENSMUST00000111800.2|Sh3pxd2a|ENSMUSG00000053617.5|SH3 and PX domains 2A 	ENSMUST00000081619.2|Sh3pxd2a|ENSMUSG00000053617.5|SH3 and PX domains 2A
mm10_v2_chr13_-_43480973_43481005	0.0848527	ACAGUAU	ENSMUST00000144326.2|Ranbp9|ENSMUSG00000038546.8|RAN binding protein 9
mm10_v2_chrX_+_159532674_159532748	0.0801059	ACAGUAU	ENSMUST00000057180.6|A830080D01Rik|ENSMUSG00000044150.6|RIKEN cDNA A830080D01 gene
mm10_v2_chrX_+_134601179_134601266	0.0780561	ACAGUAU	ENSMUST00000074950.4|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2 	ENSMUST00000113203.1|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2 	ENSMUST00000113202.1|Hnrnph2|ENSMUSG00000045427.7|heterogeneous nuclear ribonucleoprotein H2
mm10_v2_chr15_-_28025834_28025879	0.0779524	ACAGUAU	ENSMUST00000090247.5|Trio|ENSMUSG00000022263.9|triple functional domain (PTPRF interacting)
mm10_v2_chr2_+_180582712_180582742	0.0757139	ACAGUAU	ENSMUST00000029085.8|Mrgbp|ENSMUSG00000027569.9|MRG/MORF4L binding protein
mm10_v2_chr3_+_52268337_52268388	0.0754407	ACAGUAU	ENSMUST00000053764.5|Foxo1|ENSMUSG00000044167.5|forkhead box O1
mm10_v2_chr1_-_46854046_46854079	0.0752912	ACAGUAU	ENSMUST00000027131.4|Slc39a10|ENSMUSG00000025986.5|solute carrier family 39 (zinc transporter), member 10
mm10_v2_chr12_+_119945957_119946133	0.0715058	ACAGUAU	ENSMUST00000058644.8|Tmem196|ENSMUSG00000048004.8|transmembrane protein 196
mm10_v2_chr2_-_63184253_63184292	0.0705671	ACAGUAU	ENSMUST00000075052.3|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7 	ENSMUST00000112454.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr6_-_56797637_56797757	0.0693379	ACAGUAU	ENSMUST00000114323.1|Kbtbd2|ENSMUSG00000059486.5|kelch repeat and BTB (POZ) domain containing 2
mm10_v2_chr7_-_134938264_134938430	0.0692853	ACAGUAU	ENSMUST00000171394.1|Fam196a|ENSMUSG00000073805.4|family with sequence similarity 196, member A
mm10_v2_chr7_+_36698002_36698118	0.0684975	ACAGUAU	ENSMUST00000021641.6|Tshz3|ENSMUSG00000021217.6|teashirt zinc finger family member 3
mm10_v2_chr19_+_27217357_27217424	0.0678473	ACAGUAU	ENSMUST00000047645.6|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000167487.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chr14_-_45318556_45318579	0.0675396	ACAGUAU	ENSMUST00000022378.7|Ero1l|ENSMUSG00000021831.8|ERO1-like (S. cerevisiae)
mm10_v2_chr2_-_60125651_60125775	0.0670707	ACAGUAU	ENSMUST00000112550.1|Baz2b|ENSMUSG00000026987.10|bromodomain adjacent to zinc finger domain, 2B
mm10_v2_chr10_+_56377300_56377338	0.0636756	ACAGUAU	ENSMUST00000068581.7|Gja1|ENSMUSG00000050953.9|gap junction protein, alpha 1
mm10_v2_chr11_-_78697370_78697475	0.0629645	ACAGUAU	ENSMUST00000142739.1|Nlk|ENSMUSG00000017376.9|nemo like kinase
mm10_v2_chr14_+_27238018_27238046	0.0619606	ACAGUAU	ENSMUST00000049206.5|Arhgef3|ENSMUSG00000021895.9|Rho guanine nucleotide exchange factor (GEF) 3
mm10_v2_chr2_+_121866918_121866997	0.0618185	ACAGUAU	ENSMUST00000078752.3|Casc4|ENSMUSG00000060227.9|cancer susceptibility candidate 4 	ENSMUST00000110586.3|Casc4|ENSMUSG00000060227.9|cancer susceptibility candidate 4
mm10_v2_chr15_-_58214882_58214926	0.0616844	ACAGUAU	ENSMUST00000022986.6|Fbxo32|ENSMUSG00000022358.6|F-box protein 32
mm10_v2_chr4_-_33248500_33248518	0.0612698	ACAGUAU	ENSMUST00000049357.9|Pnrc1|ENSMUSG00000040128.9|proline-rich nuclear receptor coactivator 1
mm10_v2_chr11_+_105589970_105590028	0.0598987	ACAGUAU	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chr1_-_17097839_17097889	0.0592136	ACAGUAU	ENSMUST00000038382.4|Jph1|ENSMUSG00000042686.4|junctophilin 1
mm10_v2_chr11_+_75732869_75732975	0.0575898	ACAGUAU	ENSMUST00000067664.3|Ywhae|ENSMUSG00000020849.7|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
mm10_v2_chr7_+_123123870_123123901	0.0563042	ACAGUAU	ENSMUST00000094053.5|Tnrc6a|ENSMUSG00000052707.7|trinucleotide repeat containing 6a
mm10_v2_chr3_-_104864420_104864505	0.0555964	ACAGUAU	ENSMUST00000094028.5|Capza1|ENSMUSG00000070372.7|capping protein (actin filament) muscle Z-line, alpha 1
mm10_v2_chr13_-_114458720_114458736	0.0555407	ACAGUAU	ENSMUST00000022287.5|Fst|ENSMUSG00000021765.7|follistatin
mm10_v2_chr1_+_132417409_132417464	0.0534912	ACAGUAU	ENSMUST00000045110.7|Dstyk|ENSMUSG00000042046.9|dual serine/threonine and tyrosine protein kinase
mm10_v2_chr13_+_49341549_49341623	0.0533733	ACAGUAU	ENSMUST00000110084.2|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000048544.6|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila) 	ENSMUST00000110085.3|Bicd2|ENSMUSG00000037933.9|bicaudal D homolog 2 (Drosophila)
mm10_v2_chr11_+_42419729_42419785	0.0507926	ACAGUAU	ENSMUST00000007797.4|Gabrb2|ENSMUSG00000007653.6|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm10_v2_chr7_-_81934316_81934473	0.050397	ACAGUAU	ENSMUST00000026094.5|Hdgfrp3|ENSMUSG00000025104.7|hepatoma-derived growth factor, related protein 3 	ENSMUST00000107305.1|Hdgfrp3|ENSMUSG00000025104.7|hepatoma-derived growth factor, related protein 3
mm10_v2_chr4_-_99829180_99829191	0.0502262	ACAGUAU	ENSMUST00000146258.1|Itgb3bp|ENSMUSG00000028549.11|integrin beta 3 binding protein (beta3-endonexin)
mm10_v2_chr10_-_30842765_30842801	0.0496906	ACAGUAU	ENSMUST00000019924.8|Hey2|ENSMUSG00000019789.8|hairy/enhancer-of-split related with YRPW motif 2
mm10_v2_chr2_+_154436437_154436535	0.0484589	ACAGUAU	ENSMUST00000109725.1|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000099178.3|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000045270.8|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) 	ENSMUST00000109724.1|Cbfa2t2|ENSMUSG00000038533.9|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm10_v2_chr8_+_22476700_22476734	0.046863	ACAGUAU	ENSMUST00000067786.7|Slc20a2|ENSMUSG00000037656.8|solute carrier family 20, member 2
mm10_v2_chr14_+_54894133_54894155	0.0459601	ACAGUAU	ENSMUST00000116476.2|Pabpn1|ENSMUSG00000022194.9|poly(A) binding protein, nuclear 1 	ENSMUST00000022808.7|Pabpn1|ENSMUSG00000022194.9|poly(A) binding protein, nuclear 1 	ENSMUST00000150975.1|Pabpn1|ENSMUSG00000022194.9|poly(A) binding protein, nuclear 1
mm10_v2_chr4_-_126429501_126429556	0.0437943	ACAGUAU	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr10_+_43479140_43479194	0.0435928	ACAGUAU	ENSMUST00000167488.1|Bend3|ENSMUSG00000038214.8|BEN domain containing 3 	ENSMUST00000040147.7|Bend3|ENSMUSG00000038214.8|BEN domain containing 3
mm10_v2_chr4_-_72200833_72200928	0.0423818	ACAGUAU	ENSMUST00000102848.2|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl) 	ENSMUST00000072695.6|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl) 	ENSMUST00000107337.1|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl) 	ENSMUST00000074216.7|Tle1|ENSMUSG00000008305.12|transducin-like enhancer of split 1, homolog of Drosophila E(spl)
mm10_v2_chr6_-_48086530_48086658	0.041268	ACAGUAU	ENSMUST00000073124.6|Zfp746|ENSMUSG00000057691.6|zinc finger protein 746
mm10_v2_chr16_-_13668122_13668181	0.039965	ACAGUAU	ENSMUST00000058884.8|Parn|ENSMUSG00000022685.8|poly(A)-specific ribonuclease (deadenylation nuclease)
mm10_v2_chr3_-_144570136_144570227	0.0396897	ACAGUAU	ENSMUST00000043325.7|Hs2st1|ENSMUSG00000040151.8|heparan sulfate 2-O-sulfotransferase 1
mm10_v2_chr16_+_33684460_33684472	0.038003	ACAGUAU	ENSMUST00000152782.1|Heg1|ENSMUSG00000075254.5|HEG homolog 1 (zebrafish) 	ENSMUST00000179453.1|Heg1|ENSMUSG00000075254.5|HEG homolog 1 (zebrafish)
mm10_v2_chr2_+_178118975_178119158	0.0363274	ACAGUAU	ENSMUST00000108917.1|Phactr3|ENSMUSG00000027525.11|phosphatase and actin regulator 3
mm10_v2_chr13_+_5861489_5861501	0.0351683	ACAGUAU	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chrX_+_99042581_99042613	0.0349119	ACAGUAU	ENSMUST00000036606.7|Stard8|ENSMUSG00000031216.7|START domain containing 8
mm10_v2_chr2_-_104494400_104494463	0.0345879	ACAGUAU	ENSMUST00000028600.7|Hipk3|ENSMUSG00000027177.8|homeodomain interacting protein kinase 3
mm10_v2_chr10_-_91123955_91124059	0.0327108	ACAGUAU	ENSMUST00000164505.1|Slc25a3|ENSMUSG00000061904.6|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 	ENSMUST00000170810.1|Slc25a3|ENSMUSG00000061904.6|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 	ENSMUST00000076694.6|Slc25a3|ENSMUSG00000061904.6|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
mm10_v2_chr6_+_21215472_21215503	0.0309753	ACAGUAU	ENSMUST00000081542.5|Kcnd2|ENSMUSG00000060882.5|potassium voltage-gated channel, Shal-related family, member 2
mm10_v2_chr6_-_90810118_90810160	0.0274669	ACAGUAU	ENSMUST00000101151.3|Iqsec1|ENSMUSG00000034312.7|IQ motif and Sec7 domain 1
mm10_v2_chr1_+_64532790_64532815	0.0274281	ACAGUAU	ENSMUST00000049932.5|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000087366.4|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1 	ENSMUST00000171164.1|Creb1|ENSMUSG00000025958.8|cAMP responsive element binding protein 1
mm10_v2_chr3_+_96635430_96635475	0.0263261	ACAGUAU	ENSMUST00000118557.1|Pex11b|ENSMUSG00000028102.9|peroxisomal biogenesis factor 11 beta
mm10_v2_chr10_+_34389974_34389990	0.0232144	ACAGUAU	ENSMUST00000105511.1|Col10a1|ENSMUSG00000039462.4|collagen, type X, alpha 1
mm10_v2_chr6_+_107529717_107529780	0.0219768	ACAGUAU	ENSMUST00000049285.8|Lrrn1|ENSMUSG00000034648.8|leucine rich repeat protein 1, neuronal
mm10_v2_chr4_-_138913915_138913983	0.0210704	ACAGUAU	ENSMUST00000097830.3|Otud3|ENSMUSG00000041161.8|OTU domain containing 3
mm10_v2_chr1_+_32172711_32172806	0.0209721	ACAGUAU	ENSMUST00000027226.5|Khdrbs2|ENSMUSG00000026058.5|KH domain containing, RNA binding, signal transduction associated 2
mm10_v2_chr13_-_38635036_38635119	0.0189984	ACAGUAU	ENSMUST00000035899.6|Bloc1s5|ENSMUSG00000038982.9|biogenesis of organelles complex-1, subunit 5, muted
mm10_v2_chr5_-_121836852_121836880	0.0185954	ACAGUAU	ENSMUST00000086310.1|Sh2b3|ENSMUSG00000042594.10|SH2B adaptor protein 3
mm10_v2_chr7_-_144553657_144553757	0.0167133	ACAGUAU	ENSMUST00000168134.3|Ppfia1|ENSMUSG00000037519.10|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
mm10_v2_chr8_-_106337987_106337996	0.0165534	ACAGUAU	ENSMUST00000067512.7|Smpd3|ENSMUSG00000031906.8|sphingomyelin phosphodiesterase 3, neutral
mm10_v2_chr14_-_30353468_30353535	0.016084	ACAGUAU	ENSMUST00000112249.1|Cacna1d|ENSMUSG00000015968.10|calcium channel, voltage-dependent, L type, alpha 1D subunit
mm10_v2_chr5_+_66968416_66968447	0.0157777	ACAGUAU	ENSMUST00000038188.7|Limch1|ENSMUSG00000037736.12|LIM and calponin homology domains 1
mm10_v2_chr11_+_17159263_17159357	0.0155286	ACAGUAU	ENSMUST00000102880.4|Ppp3r1|ENSMUSG00000033953.10|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm10_v2_chr2_-_66124994_66125143	0.014119	ACAGUAU	ENSMUST00000028378.3|Galnt3|ENSMUSG00000026994.3|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3
mm10_v2_chr4_-_132212255_132212303	0.0137876	ACAGUAU	ENSMUST00000152796.1|Ythdf2|ENSMUSG00000040025.11|YTH domain family 2
mm10_v2_chr16_+_56075399_56075492	0.013387	ACAGUAU	ENSMUST00000089362.2|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7 	ENSMUST00000089360.3|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7 	ENSMUST00000049128.6|Senp7|ENSMUSG00000052917.8|SUMO1/sentrin specific peptidase 7
mm10_v2_chr6_-_147264124_147264167	0.0127847	ACAGUAU	ENSMUST00000052296.6|Pthlh|ENSMUSG00000048776.6|parathyroid hormone-like peptide
mm10_v2_chr4_-_149099802_149099876	0.0120577	ACAGUAU	ENSMUST00000103217.4|Pex14|ENSMUSG00000028975.10|peroxisomal biogenesis factor 14
mm10_v2_chr15_+_5143861_5143896	0.0118023	ACAGUAU	ENSMUST00000051186.8|Prkaa1|ENSMUSG00000050697.8|protein kinase, AMP-activated, alpha 1 catalytic subunit
mm10_v2_chr10_-_117148474_117148510	0.011165	ACAGUAU	ENSMUST00000020381.3|Frs2|ENSMUSG00000020170.3|fibroblast growth factor receptor substrate 2
mm10_v2_chr14_-_93888732_93888732	0.0093216	ACAGUAU	ENSMUST00000068992.2|Pcdh9|ENSMUSG00000055421.3|protocadherin 9
mm10_v2_chr1_+_127774164_127774238	0.00905083	ACAGUAU	ENSMUST00000027587.8|Ccnt2|ENSMUSG00000026349.8|cyclin T2 	ENSMUST00000112570.1|Ccnt2|ENSMUSG00000026349.8|cyclin T2
mm10_v2_chr14_-_78308031_78308050	0.00715751	ACAGUAU	ENSMUST00000022592.7|Tnfsf11|ENSMUSG00000022015.8|tumor necrosis factor (ligand) superfamily, member 11
mm10_v2_chr18_+_69345721_69345811	0.00534399	ACAGUAU	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr16_+_58408443_58408523	0.0051984	ACAGUAU	ENSMUST00000046663.7|Dcbld2|ENSMUSG00000035107.7|discoidin, CUB and LCCL domain containing 2
mm10_v2_chr3_+_58415689_58415689	0.00180525	ACAGUAU	ENSMUST00000099090.2|Tsc22d2|ENSMUSG00000027806.5|TSC22 domain family, member 2
mm10_v2_chr4_-_6990774_6990823	0.00157096	ACAGUAU	ENSMUST00000039987.3|Tox|ENSMUSG00000041272.5|thymocyte selection-associated high mobility group box
