mm10_v2_chr10_+_87859255_87859266	1.68958	AAUGCCC	ENSMUST00000105300.2|Igf1|ENSMUSG00000020053.12|insulin-like growth factor 1
mm10_v2_chr10_-_114801364_114801364	1.66318	AAUGCCC	ENSMUST00000061632.7|Trhde|ENSMUSG00000050663.7|TRH-degrading enzyme
mm10_v2_chr8_+_76899772_76899828	1.61303	AAUGCCC	ENSMUST00000109913.2|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2
mm10_v2_chr14_-_18239053_18239127	1.55285	AAUGCCC	ENSMUST00000090543.5|Nr1d2|ENSMUSG00000021775.10|nuclear receptor subfamily 1, group D, member 2
mm10_v2_chr6_-_138043411_138043411	1.2717	AAUGCCC	ENSMUST00000111873.1|Slc15a5|ENSMUSG00000044378.6|solute carrier family 15, member 5
mm10_v2_chr1_-_105356658_105356714	0.907734	AAUGCCC	ENSMUST00000058688.5|Rnf152|ENSMUSG00000047496.5|ring finger protein 152 	ENSMUST00000172299.1|Rnf152|ENSMUSG00000047496.5|ring finger protein 152
mm10_v2_chr9_+_108692116_108692193	0.902863	AAUGCCC	ENSMUST00000035220.6|Prkar2a|ENSMUSG00000032601.8|protein kinase, cAMP dependent regulatory, type II alpha
mm10_v2_chr11_+_28853189_28853259	0.90191	AAUGCCC	ENSMUST00000020759.5|Efemp1|ENSMUSG00000020467.9|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm10_v2_chr4_-_19708922_19709004	0.879294	AAUGCCC	ENSMUST00000108246.2|Wwp1|ENSMUSG00000041058.9|WW domain containing E3 ubiquitin protein ligase 1
mm10_v2_chr15_+_41789495_41789527	0.812548	AAUGCCC	ENSMUST00000090095.5|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1 	ENSMUST00000022918.7|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr5_-_106696819_106696839	0.794999	AAUGCCC	ENSMUST00000127434.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112696.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112698.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644
mm10_v2_chr2_-_53191214_53191284	0.794146	AAUGCCC	ENSMUST00000076313.6|Prpf40a|ENSMUSG00000061136.7|PRP40 pre-mRNA processing factor 40 homolog A (yeast) 	ENSMUST00000125243.1|Prpf40a|ENSMUSG00000061136.7|PRP40 pre-mRNA processing factor 40 homolog A (yeast)
mm10_v2_chr4_+_100095791_100095867	0.785913	AAUGCCC	ENSMUST00000039630.5|Ror1|ENSMUSG00000035305.5|receptor tyrosine kinase-like orphan receptor 1
mm10_v2_chr3_-_121815212_121815302	0.754311	AAUGCCC	ENSMUST00000029770.5|Abcd3|ENSMUSG00000028127.5|ATP-binding cassette, sub-family D (ALD), member 3
mm10_v2_chr2_+_71981184_71981287	0.691835	AAUGCCC	ENSMUST00000090826.5|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4 	ENSMUST00000102698.3|Rapgef4|ENSMUSG00000049044.10|Rap guanine nucleotide exchange factor (GEF) 4
mm10_v2_chr15_+_58415456_58415512	0.631916	AAUGCCC	ENSMUST00000037270.3|D15Ertd621e|ENSMUSG00000037119.3|DNA segment, Chr 15, ERATO Doi 621, expressed
mm10_v2_chr17_+_3326552_3326585	0.60768	AAUGCCC	ENSMUST00000169838.1|Tiam2|ENSMUSG00000023800.8|T cell lymphoma invasion and metastasis 2
mm10_v2_chr5_+_63649335_63649451	0.593645	AAUGCCC	ENSMUST00000159584.1|3110047P20Rik|ENSMUSG00000090061.3|RIKEN cDNA 3110047P20 gene
mm10_v2_chr13_-_64274879_64274947	0.56699	AAUGCCC	ENSMUST00000109770.1|Cdc14b|ENSMUSG00000033102.8|CDC14 cell division cycle 14B
mm10_v2_chr2_+_55437100_55437182	0.565388	AAUGCCC	ENSMUST00000112633.2|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3 	ENSMUST00000112632.1|Kcnj3|ENSMUSG00000026824.5|potassium inwardly-rectifying channel, subfamily J, member 3
mm10_v2_chr5_-_66173051_66173117	0.543115	AAUGCCC	ENSMUST00000113726.1|Rbm47|ENSMUSG00000070780.5|RNA binding motif protein 47
mm10_v2_chr19_-_29805989_29806009	0.507715	AAUGCCC	ENSMUST00000177155.1|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene 	ENSMUST00000059484.7|9930021J03Rik|ENSMUSG00000046138.8|RIKEN cDNA 9930021J03 gene
mm10_v2_chr2_-_103303179_103303278	0.501915	AAUGCCC	ENSMUST00000090475.3|Ehf|ENSMUSG00000012350.9|ets homologous factor
mm10_v2_chr4_+_41465134_41465159	0.485694	AAUGCCC	ENSMUST00000030154.6|Nudt2|ENSMUSG00000028443.6|nudix (nucleoside diphosphate linked moiety X)-type motif 2
mm10_v2_chr10_+_39732099_39732140	0.482397	AAUGCCC	ENSMUST00000019986.6|Rev3l|ENSMUSG00000019841.9|REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
mm10_v2_chr10_+_99108135_99108206	0.465616	AAUGCCC	ENSMUST00000161240.2|Galnt4|ENSMUSG00000090035.2|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4
mm10_v2_chr14_-_39472825_39473088	0.451509	AAUGCCC	ENSMUST00000168810.2|Nrg3|ENSMUSG00000041014.11|neuregulin 3 	ENSMUST00000173780.1|Nrg3|ENSMUSG00000041014.11|neuregulin 3 	ENSMUST00000166968.2|Nrg3|ENSMUSG00000041014.11|neuregulin 3
mm10_v2_chr18_-_39490649_39490717	0.444801	AAUGCCC	ENSMUST00000115567.1|Nr3c1|ENSMUSG00000024431.8|nuclear receptor subfamily 3, group C, member 1
mm10_v2_chr16_+_34784917_34784935	0.437553	AAUGCCC	ENSMUST00000023538.8|Mylk|ENSMUSG00000022836.10|myosin, light polypeptide kinase
mm10_v2_chr3_+_152346465_152346531	0.430402	AAUGCCC	ENSMUST00000026507.6|Usp33|ENSMUSG00000025437.9|ubiquitin specific peptidase 33 	ENSMUST00000117492.2|Usp33|ENSMUSG00000025437.9|ubiquitin specific peptidase 33
mm10_v2_chr12_+_40446050_40446099	0.429929	AAUGCCC	ENSMUST00000037488.6|Dock4|ENSMUSG00000035954.9|dedicator of cytokinesis 4
mm10_v2_chr13_-_8871696_8871749	0.415635	AAUGCCC	ENSMUST00000054251.6|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37 	ENSMUST00000176813.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr1_-_13589717_13589904	0.406502	AAUGCCC	ENSMUST00000027068.4|Tram1|ENSMUSG00000025935.4|translocating chain-associating membrane protein 1
mm10_v2_chr17_+_26715644_26715724	0.392238	AAUGCCC	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr10_+_84576626_84576626	0.390396	AAUGCCC	ENSMUST00000020223.7|Tcp11l2|ENSMUSG00000020034.7|t-complex 11 (mouse) like 2
mm10_v2_chr19_-_6921804_6921834	0.380965	AAUGCCC	ENSMUST00000025906.4|Esrra|ENSMUSG00000024955.7|estrogen related receptor, alpha
mm10_v2_chr8_+_90828820_90828842	0.380958	AAUGCCC	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr10_+_86300372_86300372	0.373186	AAUGCCC	ENSMUST00000020234.7|Timp3|ENSMUSG00000020044.7|tissue inhibitor of metalloproteinase 3
mm10_v2_chr6_+_21949571_21949683	0.368146	AAUGCCC	ENSMUST00000031680.3|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3 	ENSMUST00000115389.1|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3 	ENSMUST00000151473.1|Ing3|ENSMUSG00000029670.6|inhibitor of growth family, member 3
mm10_v2_chr9_-_75559604_75559665	0.364781	AAUGCCC	ENSMUST00000072232.7|Tmod3|ENSMUSG00000058587.7|tropomodulin 3
mm10_v2_chrX_-_104413825_104413856	0.36201	AAUGCCC	ENSMUST00000033695.5|Abcb7|ENSMUSG00000031333.7|ATP-binding cassette, sub-family B (MDR/TAP), member 7
mm10_v2_chr14_-_31830402_31830440	0.360347	AAUGCCC	ENSMUST00000014640.7|Ankrd28|ENSMUSG00000014496.7|ankyrin repeat domain 28
mm10_v2_chr19_+_32757497_32757587	0.338482	AAUGCCC	ENSMUST00000013807.7|Pten|ENSMUSG00000013663.7|phosphatase and tensin homolog
mm10_v2_chr5_+_23434435_23434471	0.33664	AAUGCCC	ENSMUST00000094962.2|Kmt2e|ENSMUSG00000029004.9|lysine (K)-specific methyltransferase 2E 	ENSMUST00000115128.1|Kmt2e|ENSMUSG00000029004.9|lysine (K)-specific methyltransferase 2E
mm10_v2_chr1_-_64737735_64737756	0.336463	AAUGCCC	ENSMUST00000063982.5|Fzd5|ENSMUSG00000045005.8|frizzled homolog 5 (Drosophila) 	ENSMUST00000116133.2|Fzd5|ENSMUSG00000045005.8|frizzled homolog 5 (Drosophila)
mm10_v2_chr2_-_140066661_140066805	0.33113	AAUGCCC	ENSMUST00000046656.2|Tasp1|ENSMUSG00000039033.5|taspase, threonine aspartase 1 	ENSMUST00000099304.3|Tasp1|ENSMUSG00000039033.5|taspase, threonine aspartase 1 	ENSMUST00000110079.2|Tasp1|ENSMUSG00000039033.5|taspase, threonine aspartase 1
mm10_v2_chr10_+_106470281_106470367	0.329933	AAUGCCC	ENSMUST00000029404.9|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENSMUST00000169303.1|Ppfia2|ENSMUSG00000053825.8|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
mm10_v2_chr9_-_101251810_101251839	0.317685	AAUGCCC	ENSMUST00000075941.5|Ppp2r3a|ENSMUSG00000043154.9|protein phosphatase 2, regulatory subunit B'', alpha
mm10_v2_chr16_-_11203259_11203331	0.30624	AAUGCCC	ENSMUST00000119953.1|Rsl1d1|ENSMUSG00000005846.11|ribosomal L1 domain containing 1
mm10_v2_chr16_-_30388530_30388530	0.295007	AAUGCCC	ENSMUST00000100013.2|Atp13a3|ENSMUSG00000022533.7|ATPase type 13A3 	ENSMUST00000061350.6|Atp13a3|ENSMUSG00000022533.7|ATPase type 13A3
mm10_v2_chr4_+_116221633_116221661	0.290915	AAUGCCC	ENSMUST00000030464.7|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr6_-_114921778_114921837	0.289646	AAUGCCC	ENSMUST00000032459.7|Vgll4|ENSMUSG00000030315.9|vestigial like 4 (Drosophila)
mm10_v2_chr17_+_86753900_86753914	0.28441	AAUGCCC	ENSMUST00000024954.9|Epas1|ENSMUSG00000024140.9|endothelial PAS domain protein 1
mm10_v2_chr5_+_110135823_110135887	0.278455	AAUGCCC	ENSMUST00000112519.2|Chfr|ENSMUSG00000014668.9|checkpoint with forkhead and ring finger domains 	ENSMUST00000014812.8|Chfr|ENSMUSG00000014668.9|checkpoint with forkhead and ring finger domains
mm10_v2_chr19_-_47464406_47464450	0.272632	AAUGCCC	ENSMUST00000111800.2|Sh3pxd2a|ENSMUSG00000053617.5|SH3 and PX domains 2A 	ENSMUST00000081619.2|Sh3pxd2a|ENSMUSG00000053617.5|SH3 and PX domains 2A
mm10_v2_chr17_-_80480435_80480462	0.2692	AAUGCCC	ENSMUST00000068714.5|Sos1|ENSMUSG00000024241.6|son of sevenless homolog 1 (Drosophila)
mm10_v2_chr4_-_132212255_132212303	0.268369	AAUGCCC	ENSMUST00000152796.1|Ythdf2|ENSMUSG00000040025.11|YTH domain family 2
mm10_v2_chr2_+_109890846_109890882	0.264776	AAUGCCC	ENSMUST00000028583.7|Lin7c|ENSMUSG00000027162.7|lin-7 homolog C (C. elegans)
mm10_v2_chr5_-_24842579_24842624	0.263924	AAUGCCC	ENSMUST00000030787.8|Rheb|ENSMUSG00000028945.8|Ras homolog enriched in brain
mm10_v2_chr2_-_12301914_12301922	0.257945	AAUGCCC	ENSMUST00000028106.4|Itga8|ENSMUSG00000026768.4|integrin alpha 8
mm10_v2_chr11_+_33963013_33963013	0.254965	AAUGCCC	ENSMUST00000020362.2|Kcnmb1|ENSMUSG00000020155.2|potassium large conductance calcium-activated channel, subfamily M, beta member 1
mm10_v2_chr11_-_62457289_62457332	0.240367	AAUGCCC	ENSMUST00000069456.4|Ncor1|ENSMUSG00000018501.11|nuclear receptor co-repressor 1 	ENSMUST00000018645.6|Ncor1|ENSMUSG00000018501.11|nuclear receptor co-repressor 1
mm10_v2_chr11_-_51857624_51857686	0.223078	AAUGCCC	ENSMUST00000020655.7|Phf15|ENSMUSG00000020387.9|PHD finger protein 15 	ENSMUST00000109090.1|Phf15|ENSMUSG00000020387.9|PHD finger protein 15
mm10_v2_chr6_-_88446491_88446539	0.214945	AAUGCCC	ENSMUST00000165242.1|Eefsec|ENSMUSG00000033216.7|eukaryotic elongation factor, selenocysteine-tRNA-specific
mm10_v2_chr11_-_104442232_104442291	0.201437	AAUGCCC	ENSMUST00000106977.1|Kansl1|ENSMUSG00000018412.10|KAT8 regulatory NSL complex subunit 1 	ENSMUST00000106972.1|Kansl1|ENSMUSG00000018412.10|KAT8 regulatory NSL complex subunit 1
mm10_v2_chr10_-_56228636_56228695	0.197371	AAUGCCC	ENSMUST00000099739.3|Tbc1d32|ENSMUSG00000038122.8|TBC1 domain family, member 32
mm10_v2_chr6_+_115931922_115931937	0.193966	AAUGCCC	ENSMUST00000032471.6|Rho|ENSMUSG00000030324.6|rhodopsin
mm10_v2_chr2_-_48949206_48949276	0.19182	AAUGCCC	ENSMUST00000090976.3|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000149679.1|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000028098.4|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4
mm10_v2_chr14_-_47568427_47568436	0.191709	AAUGCCC	ENSMUST00000042988.6|Atg14|ENSMUSG00000037526.6|autophagy related 14
mm10_v2_chr6_-_99666762_99666786	0.191642	AAUGCCC	ENSMUST00000032151.2|Eif4e3|ENSMUSG00000093661.1|eukaryotic translation initiation factor 4E member 3
mm10_v2_chr6_-_116193426_116193501	0.191047	AAUGCCC	ENSMUST00000088896.3|Tmcc1|ENSMUSG00000030126.11|transmembrane and coiled coil domains 1
mm10_v2_chr15_+_102406143_102406380	0.187575	AAUGCCC	ENSMUST00000170884.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000165924.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000163709.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000001326.6|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr10_-_118868903_118868903	0.1838	AAUGCCC	ENSMUST00000004281.8|Dyrk2|ENSMUSG00000028630.8|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm10_v2_chr7_-_17027853_17027921	0.177542	AAUGCCC	ENSMUST00000003183.5|Ppp5c|ENSMUSG00000003099.5|protein phosphatase 5, catalytic subunit
mm10_v2_chr1_-_171150588_171150609	0.174794	AAUGCCC	ENSMUST00000155798.1|Sdhc|ENSMUSG00000058076.6|succinate dehydrogenase complex, subunit C, integral membrane protein 	ENSMUST00000081560.4|Sdhc|ENSMUSG00000058076.6|succinate dehydrogenase complex, subunit C, integral membrane protein 	ENSMUST00000111336.3|Sdhc|ENSMUSG00000058076.6|succinate dehydrogenase complex, subunit C, integral membrane protein
mm10_v2_chrX_-_103821940_103821992	0.173462	AAUGCCC	ENSMUST00000042664.5|Slc16a2|ENSMUSG00000033965.6|solute carrier family 16 (monocarboxylic acid transporters), member 2
mm10_v2_chr9_+_108953578_108953593	0.171769	AAUGCCC	ENSMUST00000112070.1|Col7a1|ENSMUSG00000025650.6|collagen, type VII, alpha 1
mm10_v2_chr1_+_178798438_178798467	0.169349	AAUGCCC	ENSMUST00000160789.1|Kif26b|ENSMUSG00000026494.6|kinesin family member 26B
mm10_v2_chr8_+_111536492_111536640	0.167839	AAUGCCC	ENSMUST00000168428.1|Znrf1|ENSMUSG00000033545.8|zinc and ring finger 1 	ENSMUST00000171182.1|Znrf1|ENSMUSG00000033545.8|zinc and ring finger 1
mm10_v2_chr13_+_40704005_40704005	0.160788	AAUGCCC	ENSMUST00000069457.1|Gm9979|ENSMUSG00000055732.1|predicted gene 9979
mm10_v2_chr9_-_57645561_57645672	0.15671	AAUGCCC	ENSMUST00000034863.6|Csk|ENSMUSG00000032312.6|c-src tyrosine kinase
mm10_v2_chr11_-_53423123_53423170	0.155216	AAUGCCC	ENSMUST00000036045.5|Leap2|ENSMUSG00000036216.5|liver-expressed antimicrobial peptide 2
mm10_v2_chr19_-_60226666_60226706	0.154887	AAUGCCC	ENSMUST00000065286.1|D19Ertd737e|ENSMUSG00000057858.7|DNA segment, Chr 19, ERATO Doi 737, expressed
mm10_v2_chr2_+_18677002_18677053	0.149712	AAUGCCC	ENSMUST00000028071.6|Bmi1|ENSMUSG00000026739.7|Bmi1 polycomb ring finger oncogene
mm10_v2_chr12_-_56535047_56535106	0.142031	AAUGCCC	ENSMUST00000178477.2|Nkx2-1|ENSMUSG00000001496.9|NK2 homeobox 1
mm10_v2_chr8_+_25602236_25602315	0.133139	AAUGCCC	ENSMUST00000146919.1|Whsc1l1|ENSMUSG00000054823.9|Wolf-Hirschhorn syndrome candidate 1-like 1 (human) 	ENSMUST00000142395.1|Whsc1l1|ENSMUSG00000054823.9|Wolf-Hirschhorn syndrome candidate 1-like 1 (human) 	ENSMUST00000139966.1|Whsc1l1|ENSMUSG00000054823.9|Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
mm10_v2_chr3_+_135438722_135438780	0.131542	AAUGCCC	ENSMUST00000166033.1|Ube2d3|ENSMUSG00000078578.3|ubiquitin-conjugating enzyme E2D 3
mm10_v2_chr7_+_97579868_97579901	0.131128	AAUGCCC	ENSMUST00000042399.7|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1 	ENSMUST00000107153.1|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1
mm10_v2_chr13_+_47122719_47122761	0.130051	AAUGCCC	ENSMUST00000068891.4|Rnf144b|ENSMUSG00000038068.8|ring finger protein 144B
mm10_v2_chr1_-_56972437_56972502	0.128677	AAUGCCC	ENSMUST00000042857.7|Satb2|ENSMUSG00000038331.9|special AT-rich sequence binding protein 2
mm10_v2_chr16_+_33380765_33380787	0.12701	AAUGCCC	ENSMUST00000165418.1|Zfp148|ENSMUSG00000022811.10|zinc finger protein 148
mm10_v2_chr2_+_105668888_105668914	0.126879	AAUGCCC	ENSMUST00000111086.4|Pax6|ENSMUSG00000027168.15|paired box gene 6 	ENSMUST00000111087.3|Pax6|ENSMUSG00000027168.15|paired box gene 6
mm10_v2_chr13_+_80883403_80883422	0.11715	AAUGCCC	ENSMUST00000099356.2|Arrdc3|ENSMUSG00000074794.3|arrestin domain containing 3
mm10_v2_chr15_+_58933774_58933836	0.108031	AAUGCCC	ENSMUST00000022980.3|Ndufb9|ENSMUSG00000022354.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9
mm10_v2_chr10_-_121586730_121586803	0.105929	AAUGCCC	ENSMUST00000020316.2|Tbk1|ENSMUSG00000020115.2|TANK-binding kinase 1
mm10_v2_chr16_-_60605226_60605248	0.104853	AAUGCCC	ENSMUST00000068860.6|Epha6|ENSMUSG00000055540.9|Eph receptor A6
mm10_v2_chr15_-_93275151_93275178	0.101344	AAUGCCC	ENSMUST00000057896.4|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1 	ENSMUST00000049484.6|Gxylt1|ENSMUSG00000036197.9|glucoside xylosyltransferase 1
mm10_v2_chr8_-_122974793_122974793	0.0969522	AAUGCCC	ENSMUST00000098334.5|Ankrd11|ENSMUSG00000035569.10|ankyrin repeat domain 11
mm10_v2_chr7_-_70360593_70360746	0.0965642	AAUGCCC	ENSMUST00000032768.7|Nr2f2|ENSMUSG00000030551.7|nuclear receptor subfamily 2, group F, member 2
mm10_v2_chr1_+_34849950_34850010	0.0936853	AAUGCCC	ENSMUST00000027297.4|Plekhb2|ENSMUSG00000026123.5|pleckstrin homology domain containing, family B (evectins) member 2
mm10_v2_chr9_+_7184514_7184567	0.0931715	AAUGCCC	ENSMUST00000034499.8|Dcun1d5|ENSMUSG00000032002.9|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)
mm10_v2_chr5_-_96161990_96162097	0.0911791	AAUGCCC	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr1_+_131910458_131910539	0.0906584	AAUGCCC	ENSMUST00000062264.6|Nucks1|ENSMUSG00000026434.6|nuclear casein kinase and cyclin-dependent kinase substrate 1
mm10_v2_chr10_-_128645965_128645991	0.0890732	AAUGCCC	ENSMUST00000133342.1|Ikzf4|ENSMUSG00000002578.9|IKAROS family zinc finger 4
mm10_v2_chr13_-_96670838_96670936	0.0878363	AAUGCCC	ENSMUST00000022176.8|Hmgcr|ENSMUSG00000021670.8|3-hydroxy-3-methylglutaryl-Coenzyme A reductase
mm10_v2_chr5_+_144100387_144100436	0.0875009	AAUGCCC	ENSMUST00000041804.7|Lmtk2|ENSMUSG00000038970.7|lemur tyrosine kinase 2
mm10_v2_chr16_+_21891969_21891969	0.0866795	AAUGCCC	ENSMUST00000042065.6|Map3k13|ENSMUSG00000033618.6|mitogen-activated protein kinase kinase kinase 13
mm10_v2_chr15_-_98871175_98871204	0.086281	AAUGCCC	ENSMUST00000178486.2|Kmt2d|ENSMUSG00000048154.10|lysine (K)-specific methyltransferase 2D 	ENSMUST00000023741.9|Kmt2d|ENSMUSG00000048154.10|lysine (K)-specific methyltransferase 2D
mm10_v2_chr9_+_72532214_72532271	0.0834538	AAUGCCC	ENSMUST00000163401.2|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7 	ENSMUST00000093820.3|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7
mm10_v2_chr11_+_88047693_88047727	0.0684242	AAUGCCC	ENSMUST00000079866.4|Srsf1|ENSMUSG00000018379.11|serine/arginine-rich splicing factor 1
mm10_v2_chr14_+_8080315_8080385	0.0566331	AAUGCCC	ENSMUST00000023924.3|Rpp14|ENSMUSG00000023156.3|ribonuclease P 14 subunit
mm10_v2_chr4_+_123201503_123201529	0.0563825	AAUGCCC	ENSMUST00000068262.5|Nt5c1a|ENSMUSG00000054958.6|5'-nucleotidase, cytosolic IA
mm10_v2_chr18_-_61400363_61400449	0.0556355	AAUGCCC	ENSMUST00000063307.5|Ppargc1b|ENSMUSG00000033871.8|peroxisome proliferative activated receptor, gamma, coactivator 1 beta 	ENSMUST00000075299.6|Ppargc1b|ENSMUSG00000033871.8|peroxisome proliferative activated receptor, gamma, coactivator 1 beta
mm10_v2_chr11_-_119228461_119228504	0.0527596	AAUGCCC	ENSMUST00000036113.3|Tbc1d16|ENSMUSG00000039976.3|TBC1 domain family, member 16
mm10_v2_chr11_+_77216180_77216287	0.047921	AAUGCCC	ENSMUST00000037912.5|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila) 	ENSMUST00000156488.1|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila)
mm10_v2_chr1_+_9798123_9798216	0.0475471	AAUGCCC	ENSMUST00000168907.1|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3 	ENSMUST00000166384.1|Sgk3|ENSMUSG00000025915.8|serum/glucocorticoid regulated kinase 3
mm10_v2_chr4_+_137594140_137594274	0.0454483	AAUGCCC	ENSMUST00000105840.1|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48 	ENSMUST00000055131.6|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48 	ENSMUST00000105839.1|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48 	ENSMUST00000105838.1|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48
mm10_v2_chr19_+_6306456_6306553	0.0442969	AAUGCCC	ENSMUST00000025681.7|Cdc42bpg|ENSMUSG00000024769.7|CDC42 binding protein kinase gamma (DMPK-like)
mm10_v2_chr6_-_22356068_22356175	0.0418416	AAUGCCC	ENSMUST00000163963.1|Fam3c|ENSMUSG00000029672.10|family with sequence similarity 3, member C 	ENSMUST00000165576.1|Fam3c|ENSMUSG00000029672.10|family with sequence similarity 3, member C
mm10_v2_chr10_-_112928974_112929026	0.0409777	AAUGCCC	ENSMUST00000099276.2|Atxn7l3b|ENSMUSG00000074748.2|ataxin 7-like 3B
mm10_v2_chr18_-_77713978_77714010	0.0403554	AAUGCCC	ENSMUST00000074653.4|8030462N17Rik|ENSMUSG00000047466.9|RIKEN cDNA 8030462N17 gene
mm10_v2_chr7_-_47008397_47008421	0.0362259	AAUGCCC	ENSMUST00000061639.7|Spty2d1|ENSMUSG00000049516.7|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
mm10_v2_chr6_-_56797637_56797757	0.0350435	AAUGCCC	ENSMUST00000114323.1|Kbtbd2|ENSMUSG00000059486.5|kelch repeat and BTB (POZ) domain containing 2
mm10_v2_chr15_+_6708372_6708396	0.0319042	AAUGCCC	ENSMUST00000061656.6|Rictor|ENSMUSG00000050310.8|RPTOR independent companion of MTOR, complex 2
mm10_v2_chr2_+_173659760_173659816	0.0296556	AAUGCCC	ENSMUST00000029024.3|Rab22a|ENSMUSG00000027519.4|RAB22A, member RAS oncogene family
mm10_v2_chr11_+_20543307_20543336	0.0294624	AAUGCCC	ENSMUST00000093292.4|Sertad2|ENSMUSG00000049800.7|SERTA domain containing 2
mm10_v2_chr10_+_21994666_21994694	0.0265847	AAUGCCC	ENSMUST00000020145.5|Sgk1|ENSMUSG00000019970.9|serum/glucocorticoid regulated kinase 1
mm10_v2_chr17_+_87107621_87107684	0.0179361	AAUGCCC	ENSMUST00000041369.6|Socs5|ENSMUSG00000037104.8|suppressor of cytokine signaling 5
mm10_v2_chr4_+_63544747_63544772	0.0176142	AAUGCCC	ENSMUST00000035301.6|Atp6v1g1|ENSMUSG00000039105.6|ATPase, H+ transporting, lysosomal V1 subunit G1
mm10_v2_chr4_-_126429501_126429556	0.017317	AAUGCCC	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr11_+_77686155_77686179	0.0119523	AAUGCCC	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr2_+_48814109_48814173	0.0084176	AAUGCCC	ENSMUST00000063886.3|Acvr2a|ENSMUSG00000052155.5|activin receptor IIA
mm10_v2_chr4_-_82505749_82505802	0.00758065	AAUGCCC	ENSMUST00000107245.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107246.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr9_+_113930934_113930987	0.0064251	AAUGCCC	ENSMUST00000084885.5|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1 	ENSMUST00000009885.7|Ubp1|ENSMUSG00000009741.8|upstream binding protein 1
mm10_v2_chr1_-_91931172_91931176	0.0036585	AAUGCCC	ENSMUST00000097644.2|Hdac4|ENSMUSG00000073617.2|histone deacetylase 4
mm10_v2_chr7_+_5080214_5080298	0.00189498	AAUGCCC	ENSMUST00000098845.3|Epn1|ENSMUSG00000035203.9|epsin 1 	ENSMUST00000146317.1|Epn1|ENSMUSG00000035203.9|epsin 1 	ENSMUST00000153169.1|Epn1|ENSMUSG00000035203.9|epsin 1 	ENSMUST00000045277.6|Epn1|ENSMUSG00000035203.9|epsin 1
