mm10_v2_chr18_+_51117754_51117898	2.25109	AAGUGCU	ENSMUST00000116639.2|Prr16|ENSMUSG00000073565.4|proline rich 16
mm10_v2_chr8_-_41133697_41133755	1.89195	AAGUGCU	ENSMUST00000155055.1|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1 	ENSMUST00000059115.6|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1 	ENSMUST00000145860.1|Mtus1|ENSMUSG00000045636.10|mitochondrial tumor suppressor 1
mm10_v2_chr8_-_25016743_25016877	1.78735	AAGUGCU	ENSMUST00000084032.5|Adam9|ENSMUSG00000031555.7|a disintegrin and metallopeptidase domain 9 (meltrin gamma)
mm10_v2_chr18_+_12333953_12334024	1.52967	AAGUGCU	ENSMUST00000092070.6|Lama3|ENSMUSG00000024421.10|laminin, alpha 3
mm10_v2_chr16_-_23988852_23988852	1.48702	AAGUGCU	ENSMUST00000023151.5|Bcl6|ENSMUSG00000022508.5|B cell leukemia/lymphoma 6
mm10_v2_chr18_-_10706688_10706771	1.48658	AAGUGCU	ENSMUST00000002549.7|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3 	ENSMUST00000117726.1|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3 	ENSMUST00000117828.1|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3
mm10_v2_chr15_+_41789495_41789527	1.36083	AAGUGCU	ENSMUST00000090095.5|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1 	ENSMUST00000022918.7|Oxr1|ENSMUSG00000022307.9|oxidation resistance 1
mm10_v2_chr10_-_114801364_114801364	1.3432	AAGUGCU	ENSMUST00000061632.7|Trhde|ENSMUSG00000050663.7|TRH-degrading enzyme
mm10_v2_chr9_+_53301571_53301670	1.31718	AAGUGCU	ENSMUST00000051014.1|Exph5|ENSMUSG00000034584.3|exophilin 5
mm10_v2_chr18_-_68300329_68300336	1.31566	AAGUGCU	ENSMUST00000042852.6|Fam210a|ENSMUSG00000038121.6|family with sequence similarity 210, member A
mm10_v2_chr10_+_116301374_116301428	1.24636	AAGUGCU	ENSMUST00000092167.5|Ptprb|ENSMUSG00000020154.9|protein tyrosine phosphatase, receptor type, B
mm10_v2_chr7_+_110018301_110018425	1.2427	AAGUGCU	ENSMUST00000084731.3|Ipo7|ENSMUSG00000066232.3|importin 7
mm10_v2_chr14_+_37054818_37054853	1.24039	AAGUGCU	ENSMUST00000120052.1|Lrit1|ENSMUSG00000041044.9|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
mm10_v2_chr12_+_8771317_8771328	1.19793	AAGUGCU	ENSMUST00000020911.7|Sdc1|ENSMUSG00000020592.8|syndecan 1
mm10_v2_chr1_+_6214627_6214683	1.19687	AAGUGCU	ENSMUST00000027040.6|Rb1cc1|ENSMUSG00000025907.8|RB1-inducible coiled-coil 1
mm10_v2_chr2_+_180042496_180042562	1.18411	AAGUGCU	ENSMUST00000041126.8|Ss18l1|ENSMUSG00000039086.9|synovial sarcoma translocation gene on chromosome 18-like 1
mm10_v2_chr1_+_132007606_132007634	1.1482	AAGUGCU	ENSMUST00000086556.5|Elk4|ENSMUSG00000026436.9|ELK4, member of ETS oncogene family
mm10_v2_chr9_-_52168111_52168111	1.14286	AAGUGCU	ENSMUST00000165519.1|Zc3h12c|ENSMUSG00000035164.7|zinc finger CCCH type containing 12C
mm10_v2_chr10_-_127370535_127370544	1.11376	AAGUGCU	ENSMUST00000026472.8|Inhbc|ENSMUSG00000025405.8|inhibin beta-C
mm10_v2_chr3_-_122984404_122984512	1.09545	AAGUGCU	ENSMUST00000090379.2|Usp53|ENSMUSG00000039701.7|ubiquitin specific peptidase 53
mm10_v2_chr12_-_101913116_101913267	1.07661	AAGUGCU	ENSMUST00000177536.1|Trip11|ENSMUSG00000021188.8|thyroid hormone receptor interactor 11 	ENSMUST00000176728.1|Trip11|ENSMUSG00000021188.8|thyroid hormone receptor interactor 11 	ENSMUST00000021605.7|Trip11|ENSMUSG00000021188.8|thyroid hormone receptor interactor 11
mm10_v2_chr6_-_84593810_84593922	1.07407	AAGUGCU	ENSMUST00000077705.3|Cyp26b1|ENSMUSG00000063415.6|cytochrome P450, family 26, subfamily b, polypeptide 1 	ENSMUST00000168003.2|Cyp26b1|ENSMUSG00000063415.6|cytochrome P450, family 26, subfamily b, polypeptide 1
mm10_v2_chr5_-_8997324_8997324	1.07166	AAGUGCU	ENSMUST00000003720.4|Crot|ENSMUSG00000003623.4|carnitine O-octanoyltransferase
mm10_v2_chr7_-_81454751_81454764	1.05994	AAGUGCU	ENSMUST00000098331.3|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1 	ENSMUST00000178892.1|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1
mm10_v2_chr2_+_23068168_23068241	1.05978	AAGUGCU	ENSMUST00000028121.7|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000114523.2|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5 	ENSMUST00000144088.1|Acbd5|ENSMUSG00000026781.9|acyl-Coenzyme A binding domain containing 5
mm10_v2_chr3_+_121953213_121953295	1.04293	AAGUGCU	ENSMUST00000037958.7|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29 	ENSMUST00000128366.1|Arhgap29|ENSMUSG00000039831.10|Rho GTPase activating protein 29
mm10_v2_chr10_+_34483400_34483445	1.02698	AAGUGCU	ENSMUST00000019913.7|Frk|ENSMUSG00000019779.8|fyn-related kinase 	ENSMUST00000170771.1|Frk|ENSMUSG00000019779.8|fyn-related kinase
mm10_v2_chr13_+_47043499_47043591	1.02448	AAGUGCU	ENSMUST00000037025.8|Kdm1b|ENSMUSG00000038080.10|lysine (K)-specific demethylase 1B 	ENSMUST00000143868.1|Kdm1b|ENSMUSG00000038080.10|lysine (K)-specific demethylase 1B
mm10_v2_chr5_-_123749371_123749391	1.01721	AAGUGCU	ENSMUST00000182955.1|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2 	ENSMUST00000182489.1|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2 	ENSMUST00000050827.7|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2
mm10_v2_chr5_-_63968867_63968905	1.01707	AAGUGCU	ENSMUST00000154169.1|Rell1|ENSMUSG00000047881.8|RELT-like 1
mm10_v2_chr5_-_146221426_146221555	1.00538	AAGUGCU	ENSMUST00000161859.1|Rnf6|ENSMUSG00000029634.9|ring finger protein (C3H2C3 type) 6
mm10_v2_chr3_+_16183177_16183206	0.996541	AAGUGCU	ENSMUST00000108345.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3 	ENSMUST00000108346.2|Ythdf3|ENSMUSG00000047213.8|YTH domain family 3
mm10_v2_chr11_-_86993682_86993707	0.985016	AAGUGCU	ENSMUST00000018571.4|Ypel2|ENSMUSG00000018427.7|yippee-like 2 (Drosophila)
mm10_v2_chr4_+_11156411_11156453	0.984066	AAGUGCU	ENSMUST00000029865.3|Trp53inp1|ENSMUSG00000028211.5|transformation related protein 53 inducible nuclear protein 1
mm10_v2_chr7_-_130519465_130519558	0.938934	AAGUGCU	ENSMUST00000035458.7|Ate1|ENSMUSG00000030850.9|arginyltransferase 1 	ENSMUST00000033139.7|Ate1|ENSMUSG00000030850.9|arginyltransferase 1
mm10_v2_chr18_+_8694077_8694077	0.937341	AAGUGCU	ENSMUST00000171469.1|Gm5819|ENSMUSG00000092097.1|predicted gene 5819
mm10_v2_chr2_-_60553303_60553317	0.917302	AAGUGCU	ENSMUST00000112525.2|Pla2r1|ENSMUSG00000054580.8|phospholipase A2 receptor 1 	ENSMUST00000067708.5|Pla2r1|ENSMUSG00000054580.8|phospholipase A2 receptor 1
mm10_v2_chr17_+_73107982_73108080	0.913294	AAGUGCU	ENSMUST00000130574.1|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1 	ENSMUST00000149064.1|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1 	ENSMUST00000067545.6|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1
mm10_v2_chr9_+_7764041_7764177	0.91274	AAGUGCU	ENSMUST00000052865.9|Tmem123|ENSMUSG00000050912.9|transmembrane protein 123
mm10_v2_chr19_-_34747289_34747313	0.91114	AAGUGCU	ENSMUST00000009522.3|Slc16a12|ENSMUSG00000009378.3|solute carrier family 16 (monocarboxylic acid transporters), member 12
mm10_v2_chr18_+_32163073_32163115	0.901873	AAGUGCU	ENSMUST00000096575.3|Map3k2|ENSMUSG00000024383.8|mitogen-activated protein kinase kinase kinase 2
mm10_v2_chr11_+_95414078_95414243	0.896609	AAGUGCU	ENSMUST00000107724.2|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000150884.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000107722.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein 	ENSMUST00000127713.1|Spop|ENSMUSG00000057522.9|speckle-type POZ protein
mm10_v2_chr7_+_59228743_59228769	0.876358	AAGUGCU	ENSMUST00000107537.1|Ube3a|ENSMUSG00000025326.8|ubiquitin protein ligase E3A
mm10_v2_chrX_-_164980310_164980375	0.866236	AAGUGCU	ENSMUST00000004715.1|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2 	ENSMUST00000112248.2|Mospd2|ENSMUSG00000061778.4|motile sperm domain containing 2
mm10_v2_chr5_-_76304474_76304548	0.86475	AAGUGCU	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chr17_-_43667015_43667163	0.838968	AAGUGCU	ENSMUST00000024705.4|Slc25a27|ENSMUSG00000023912.9|solute carrier family 25, member 27
mm10_v2_chr2_+_96318014_96318216	0.806498	AAGUGCU	ENSMUST00000135431.1|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C 	ENSMUST00000162807.2|Lrrc4c|ENSMUSG00000050587.8|leucine rich repeat containing 4C
mm10_v2_chr17_+_53566971_53567023	0.746528	AAGUGCU	ENSMUST00000000724.8|Kat2b|ENSMUSG00000000708.8|K(lysine) acetyltransferase 2B
mm10_v2_chr14_-_72709986_72710027	0.74027	AAGUGCU	ENSMUST00000089017.5|Fndc3a|ENSMUSG00000033487.8|fibronectin type III domain containing 3A
mm10_v2_chr1_+_139422196_139422383	0.732895	AAGUGCU	ENSMUST00000039867.7|Zbtb41|ENSMUSG00000033964.7|zinc finger and BTB domain containing 41 homolog
mm10_v2_chr5_+_8422831_8422906	0.726173	AAGUGCU	ENSMUST00000066921.3|Slc25a40|ENSMUSG00000054099.5|solute carrier family 25, member 40
mm10_v2_chr6_+_52713729_52713800	0.713169	AAGUGCU	ENSMUST00000080723.4|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1 	ENSMUST00000149588.1|Tax1bp1|ENSMUSG00000004535.6|Tax1 (human T cell leukemia virus type I) binding protein 1
mm10_v2_chr9_+_74861888_74861921	0.707591	AAGUGCU	ENSMUST00000056006.9|Onecut1|ENSMUSG00000043013.9|one cut domain, family member 1
mm10_v2_chr5_+_102481374_102481391	0.704468	AAGUGCU	ENSMUST00000094559.2|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24 	ENSMUST00000073302.5|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24
mm10_v2_chr6_-_149101674_149101686	0.695011	AAGUGCU	ENSMUST00000111557.1|Dennd5b|ENSMUSG00000030313.9|DENN/MADD domain containing 5B
mm10_v2_chr11_+_35769462_35769484	0.686893	AAGUGCU	ENSMUST00000018990.7|Pank3|ENSMUSG00000018846.8|pantothenate kinase 3
mm10_v2_chr12_-_64965496_64965538	0.686798	AAGUGCU	ENSMUST00000021331.7|Klhl28|ENSMUSG00000020948.8|kelch-like 28
mm10_v2_chr14_-_45658142_45658183	0.678223	AAGUGCU	ENSMUST00000111828.2|Ddhd1|ENSMUSG00000037697.12|DDHD domain containing 1 	ENSMUST00000051310.6|Ddhd1|ENSMUSG00000037697.12|DDHD domain containing 1
mm10_v2_chr5_+_43233463_43233491	0.669929	AAGUGCU	ENSMUST00000169035.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2 	ENSMUST00000166713.1|Cpeb2|ENSMUSG00000039782.8|cytoplasmic polyadenylation element binding protein 2
mm10_v2_chr16_-_3872378_3872411	0.665377	AAGUGCU	ENSMUST00000090522.4|Zfp597|ENSMUSG00000039789.7|zinc finger protein 597
mm10_v2_chr14_-_25769033_25769083	0.662401	AAGUGCU	ENSMUST00000069180.7|Zcchc24|ENSMUSG00000055538.7|zinc finger, CCHC domain containing 24
mm10_v2_chr4_-_53159885_53159900	0.657683	AAGUGCU	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr19_-_30549516_30549665	0.657343	AAGUGCU	ENSMUST00000025803.8|Dkk1|ENSMUSG00000024868.8|dickkopf homolog 1 (Xenopus laevis)
mm10_v2_chr17_+_26715644_26715724	0.651326	AAGUGCU	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr7_-_46958475_46958527	0.645822	AAGUGCU	ENSMUST00000094398.4|Uevld|ENSMUSG00000043262.8|UEV and lactate/malate dehyrogenase domains
mm10_v2_chr14_+_120275669_120275714	0.642523	AAGUGCU	ENSMUST00000088419.6|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2 	ENSMUST00000167459.1|Mbnl2|ENSMUSG00000022139.10|muscleblind-like 2
mm10_v2_chr3_-_142881942_142882017	0.634836	AAGUGCU	ENSMUST00000043812.8|Pkn2|ENSMUSG00000004591.10|protein kinase N2
mm10_v2_chr17_-_46031813_46031863	0.627296	AAGUGCU	ENSMUST00000024747.7|Vegfa|ENSMUSG00000023951.10|vascular endothelial growth factor A
mm10_v2_chr11_-_86807624_86807746	0.626417	AAGUGCU	ENSMUST00000018569.7|Dhx40|ENSMUSG00000018425.12|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm10_v2_chr11_+_87592145_87592229	0.624992	AAGUGCU	ENSMUST00000103179.3|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4 	ENSMUST00000092802.5|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4 	ENSMUST00000146871.1|Mtmr4|ENSMUSG00000018401.11|myotubularin related protein 4
mm10_v2_chr16_-_97922582_97922633	0.616032	AAGUGCU	ENSMUST00000170757.1|C2cd2|ENSMUSG00000045975.7|C2 calcium-dependent domain containing 2
mm10_v2_chrX_-_162888426_162888473	0.610779	AAGUGCU	ENSMUST00000033723.3|Syap1|ENSMUSG00000031357.3|synapse associated protein 1
mm10_v2_chr8_+_45507768_45507818	0.601179	AAGUGCU	ENSMUST00000067065.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000098788.3|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000067107.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000171337.2|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000138049.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000141039.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chr2_+_69897220_69897247	0.600366	AAGUGCU	ENSMUST00000055758.9|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3 	ENSMUST00000112251.2|Ubr3|ENSMUSG00000044308.11|ubiquitin protein ligase E3 component n-recognin 3
mm10_v2_chr13_+_41606216_41606216	0.597578	AAGUGCU	ENSMUST00000129449.1|Tmem170b|ENSMUSG00000087370.2|transmembrane protein 170B
mm10_v2_chr4_-_129227883_129227923	0.59499	AAGUGCU	ENSMUST00000106051.1|C77080|ENSMUSG00000050390.6|expressed sequence C77080
mm10_v2_chr6_+_146724957_146725036	0.578024	AAGUGCU	ENSMUST00000001675.7|Stk38l|ENSMUSG00000001630.7|serine/threonine kinase 38 like 	ENSMUST00000111644.1|Stk38l|ENSMUSG00000001630.7|serine/threonine kinase 38 like
mm10_v2_chr7_-_67372846_67372858	0.576504	AAGUGCU	ENSMUST00000156690.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000107476.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000076325.5|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000032776.8|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000133074.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A
mm10_v2_chr5_+_138085083_138085147	0.57478	AAGUGCU	ENSMUST00000019660.4|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1 	ENSMUST00000066617.5|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1 	ENSMUST00000110963.1|Zkscan1|ENSMUSG00000029729.6|zinc finger with KRAB and SCAN domains 1
mm10_v2_chr7_-_35802968_35803007	0.574423	AAGUGCU	ENSMUST00000061586.4|Zfp507|ENSMUSG00000044452.4|zinc finger protein 507
mm10_v2_chr2_-_37430835_37430919	0.571736	AAGUGCU	ENSMUST00000053098.5|Zbtb6|ENSMUSG00000066798.3|zinc finger and BTB domain containing 6
mm10_v2_chr3_-_84304762_84304809	0.569347	AAGUGCU	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr3_-_133544390_133544412	0.567106	AAGUGCU	ENSMUST00000098603.3|Tet2|ENSMUSG00000040943.8|tet methylcytosine dioxygenase 2
mm10_v2_chr7_+_123982799_123982869	0.557901	AAGUGCU	ENSMUST00000106437.1|Hs3st4|ENSMUSG00000078591.1|heparan sulfate (glucosamine) 3-O-sulfotransferase 4
mm10_v2_chr12_+_84451485_84451518	0.556578	AAGUGCU	ENSMUST00000137170.1|Lin52|ENSMUSG00000085793.1|lin-52 homolog (C. elegans)
mm10_v2_chr2_-_150689360_150689360	0.553087	AAGUGCU	ENSMUST00000046095.8|Vsx1|ENSMUSG00000033080.8|visual system homeobox 1 homolog (zebrafish)
mm10_v2_chr16_+_42907563_42907684	0.552828	AAGUGCU	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr13_-_9764371_9764423	0.551436	AAGUGCU	ENSMUST00000146059.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11 	ENSMUST00000110637.1|Zmynd11|ENSMUSG00000021156.10|zinc finger, MYND domain containing 11
mm10_v2_chr1_-_157412576_157412621	0.548378	AAGUGCU	ENSMUST00000078308.6|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2 	ENSMUST00000139470.1|Rasal2|ENSMUSG00000070565.5|RAS protein activator like 2
mm10_v2_chrX_+_139684980_139685082	0.542163	AAGUGCU	ENSMUST00000096313.3|Tbc1d8b|ENSMUSG00000042473.8|TBC1 domain family, member 8B
mm10_v2_chr15_-_100584075_100584075	0.540293	AAGUGCU	ENSMUST00000184908.1|POU6F1|ENSMUSG00000098598.1|POU domain, class 6, transcription factor 1 (Pou6f1), mRNA
mm10_v2_chr19_+_3767397_3767523	0.537108	AAGUGCU	ENSMUST00000113974.4|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113972.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113973.1|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113977.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000052699.6|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENSMUST00000113968.2|Suv420h1|ENSMUSG00000045098.12|suppressor of variegation 4-20 homolog 1 (Drosophila)
mm10_v2_chr8_-_85840877_85840957	0.532501	AAGUGCU	ENSMUST00000034140.7|Itfg1|ENSMUSG00000031703.7|integrin alpha FG-GAP repeat containing 1
mm10_v2_chr9_+_68653761_68653786	0.529383	AAGUGCU	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
mm10_v2_chr12_-_98737405_98737515	0.527196	AAGUGCU	ENSMUST00000170188.1|Ptpn21|ENSMUSG00000021009.8|protein tyrosine phosphatase, non-receptor type 21
mm10_v2_chr12_-_118301429_118301458	0.52613	AAGUGCU	ENSMUST00000026367.9|Sp4|ENSMUSG00000025323.9|trans-acting transcription factor 4
mm10_v2_chr2_-_104816696_104816792	0.515187	AAGUGCU	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr19_+_41582370_41582370	0.505511	AAGUGCU	ENSMUST00000172371.1|Gm340|ENSMUSG00000090673.1|predicted gene 340
mm10_v2_chr7_-_144939823_144939869	0.504717	AAGUGCU	ENSMUST00000093962.4|Ccnd1|ENSMUSG00000070348.4|cyclin D1
mm10_v2_chr18_-_79109391_79109510	0.503184	AAGUGCU	ENSMUST00000025430.8|Setbp1|ENSMUSG00000024548.9|SET binding protein 1 	ENSMUST00000161465.2|Setbp1|ENSMUSG00000024548.9|SET binding protein 1
mm10_v2_chr13_-_64153194_64153207	0.50214	AAGUGCU	ENSMUST00000059817.4|Zfp367|ENSMUSG00000044934.6|zinc finger protein 367 	ENSMUST00000117241.1|Zfp367|ENSMUSG00000044934.6|zinc finger protein 367
mm10_v2_chr18_-_46525940_46525999	0.496909	AAGUGCU	ENSMUST00000036226.5|Fem1c|ENSMUSG00000033319.5|fem-1 homolog c (C.elegans)
mm10_v2_chr17_-_88065291_88065291	0.495254	AAGUGCU	ENSMUST00000005504.8|Fbxo11|ENSMUSG00000005371.8|F-box protein 11
mm10_v2_chr11_-_104442232_104442291	0.494852	AAGUGCU	ENSMUST00000106977.1|Kansl1|ENSMUSG00000018412.10|KAT8 regulatory NSL complex subunit 1 	ENSMUST00000106972.1|Kansl1|ENSMUSG00000018412.10|KAT8 regulatory NSL complex subunit 1
mm10_v2_chr5_+_69556924_69557018	0.493426	AAGUGCU	ENSMUST00000087228.4|Guf1|ENSMUSG00000029208.10|GUF1 GTPase homolog (S. cerevisiae) 	ENSMUST00000031113.6|Guf1|ENSMUSG00000029208.10|GUF1 GTPase homolog (S. cerevisiae)
mm10_v2_chr2_-_167188787_167188815	0.490784	AAGUGCU	ENSMUST00000059826.8|Kcnb1|ENSMUSG00000050556.8|potassium voltage gated channel, Shab-related subfamily, member 1
mm10_v2_chr4_+_106316187_106316243	0.482977	AAGUGCU	ENSMUST00000165709.1|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24 	ENSMUST00000106798.1|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24 	ENSMUST00000094933.4|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24
mm10_v2_chr17_+_86753900_86753914	0.476304	AAGUGCU	ENSMUST00000024954.9|Epas1|ENSMUSG00000024140.9|endothelial PAS domain protein 1
mm10_v2_chr6_-_90810118_90810160	0.475279	AAGUGCU	ENSMUST00000101151.3|Iqsec1|ENSMUSG00000034312.7|IQ motif and Sec7 domain 1
mm10_v2_chr1_+_180893107_180893108	0.472998	AAGUGCU	ENSMUST00000085797.5|Lefty2|ENSMUSG00000066652.5|left-right determination factor 2
mm10_v2_chr10_-_7780866_7780923	0.464745	AAGUGCU	ENSMUST00000124838.1|Ginm1|ENSMUSG00000040006.7|glycoprotein integral membrane 1 	ENSMUST00000039763.7|Ginm1|ENSMUSG00000040006.7|glycoprotein integral membrane 1
mm10_v2_chr16_+_55973881_55973892	0.455398	AAGUGCU	ENSMUST00000050248.8|Rpl24|ENSMUSG00000022601.11|ribosomal protein L24
mm10_v2_chr13_+_14063776_14063822	0.452469	AAGUGCU	ENSMUST00000129488.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110536.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110534.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000039538.8|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like) 	ENSMUST00000110533.1|Arid4b|ENSMUSG00000039219.11|AT rich interactive domain 4B (RBP1-like)
mm10_v2_chr14_+_48446340_48446429	0.450915	AAGUGCU	ENSMUST00000111735.2|Tmem260|ENSMUSG00000036339.11|transmembrane protein 260
mm10_v2_chr5_+_72914264_72914304	0.448835	AAGUGCU	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr15_-_82912134_82912190	0.448544	AAGUGCU	ENSMUST00000048966.5|Tcf20|ENSMUSG00000041852.8|transcription factor 20 	ENSMUST00000109510.2|Tcf20|ENSMUSG00000041852.8|transcription factor 20
mm10_v2_chr16_-_16560201_16560223	0.441435	AAGUGCU	ENSMUST00000162045.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000162124.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000161861.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4
mm10_v2_chr12_+_71015966_71016063	0.437759	AAGUGCU	ENSMUST00000046305.5|Arid4a|ENSMUSG00000048118.11|AT rich interactive domain 4A (RBP1-like)
mm10_v2_chr16_-_38713235_38713304	0.432731	AAGUGCU	ENSMUST00000023487.4|Arhgap31|ENSMUSG00000022799.4|Rho GTPase activating protein 31
mm10_v2_chr1_+_177444653_177444669	0.430724	AAGUGCU	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr9_-_59486610_59486621	0.42909	AAGUGCU	ENSMUST00000171975.1|Arih1|ENSMUSG00000025234.5|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
mm10_v2_chr11_-_5261558_5261637	0.425929	AAGUGCU	ENSMUST00000020662.8|Kremen1|ENSMUSG00000020393.10|kringle containing transmembrane protein 1
mm10_v2_chr9_+_31030621_31030700	0.425857	AAGUGCU	ENSMUST00000115222.2|Zbtb44|ENSMUSG00000047412.9|zinc finger and BTB domain containing 44
mm10_v2_chr7_+_100706702_100706731	0.42579	AAGUGCU	ENSMUST00000049053.7|Fam168a|ENSMUSG00000029461.9|family with sequence similarity 168, member A
mm10_v2_chr12_+_111538101_111538243	0.424416	AAGUGCU	ENSMUST00000166123.1|Eif5|ENSMUSG00000021282.10|eukaryotic translation initiation factor 5
mm10_v2_chr13_-_104228833_104228849	0.423547	AAGUGCU	ENSMUST00000022226.4|Ppwd1|ENSMUSG00000021713.8|peptidylprolyl isomerase domain and WD repeat containing 1
mm10_v2_chr15_-_53902472_53902530	0.422619	AAGUGCU	ENSMUST00000078673.6|Samd12|ENSMUSG00000058656.6|sterile alpha motif domain containing 12
mm10_v2_chr15_-_67113909_67113992	0.418216	AAGUGCU	ENSMUST00000092640.5|St3gal1|ENSMUSG00000013846.9|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
mm10_v2_chrX_-_48208566_48208691	0.417257	AAGUGCU	ENSMUST00000037960.4|Zdhhc9|ENSMUSG00000036985.6|zinc finger, DHHC domain containing 9
mm10_v2_chr9_+_107340593_107340648	0.417198	AAGUGCU	ENSMUST00000042581.2|6430571L13Rik|ENSMUSG00000037977.5|RIKEN cDNA 6430571L13 gene
mm10_v2_chr10_-_67096931_67096988	0.412574	AAGUGCU	ENSMUST00000020023.7|Reep3|ENSMUSG00000019873.7|receptor accessory protein 3
mm10_v2_chr6_-_126645784_126645801	0.411597	AAGUGCU	ENSMUST00000055168.3|Kcna1|ENSMUSG00000047976.3|potassium voltage-gated channel, shaker-related subfamily, member 1
mm10_v2_chr4_-_14826582_14826589	0.405009	AAGUGCU	ENSMUST00000117268.1|Otud6b|ENSMUSG00000040550.10|OTU domain containing 6B
mm10_v2_chr10_+_70245083_70245140	0.40435	AAGUGCU	ENSMUST00000046807.6|Slc16a9|ENSMUSG00000037762.6|solute carrier family 16 (monocarboxylic acid transporters), member 9
mm10_v2_chr1_-_161876656_161876682	0.400334	AAGUGCU	ENSMUST00000048377.5|Suco|ENSMUSG00000040297.7|SUN domain containing ossification factor
mm10_v2_chr11_-_71019233_71019303	0.399311	AAGUGCU	ENSMUST00000108523.3|Derl2|ENSMUSG00000018442.7|Der1-like domain family, member 2 	ENSMUST00000143850.1|Derl2|ENSMUSG00000018442.7|Der1-like domain family, member 2
mm10_v2_chr7_-_70360593_70360746	0.399187	AAGUGCU	ENSMUST00000032768.7|Nr2f2|ENSMUSG00000030551.7|nuclear receptor subfamily 2, group F, member 2
mm10_v2_chr19_+_18670780_18670810	0.398306	AAGUGCU	ENSMUST00000025632.9|2410127L17Rik|ENSMUSG00000024726.9|RIKEN cDNA 2410127L17 gene
mm10_v2_chr3_+_65528404_65528431	0.398061	AAGUGCU	ENSMUST00000047906.3|Tiparp|ENSMUSG00000034640.3|TCDD-inducible poly(ADP-ribose) polymerase
mm10_v2_chr9_+_65032413_65032466	0.396656	AAGUGCU	ENSMUST00000034960.6|Dpp8|ENSMUSG00000032393.8|dipeptidylpeptidase 8
mm10_v2_chr8_-_67974567_67974596	0.393239	AAGUGCU	ENSMUST00000098696.3|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000038959.9|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3 	ENSMUST00000093469.4|Psd3|ENSMUSG00000030465.12|pleckstrin and Sec7 domain containing 3
mm10_v2_chr13_-_8871696_8871749	0.393013	AAGUGCU	ENSMUST00000054251.6|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37 	ENSMUST00000176813.1|Wdr37|ENSMUSG00000021147.10|WD repeat domain 37
mm10_v2_chr17_+_25188380_25188418	0.385302	AAGUGCU	ENSMUST00000039734.5|Unkl|ENSMUSG00000015127.8|unkempt-like (Drosophila)
mm10_v2_chr9_+_59750876_59750918	0.384571	AAGUGCU	ENSMUST00000136740.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000135298.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000128341.1|Myo9a|ENSMUSG00000039585.9|myosin IXa
mm10_v2_chr1_+_127204986_127205051	0.383943	AAGUGCU	ENSMUST00000038361.4|Mgat5|ENSMUSG00000036155.7|mannoside acetylglucosaminyltransferase 5
mm10_v2_chr8_-_27174623_27174651	0.383856	AAGUGCU	ENSMUST00000033878.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I) 	ENSMUST00000054212.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I)
mm10_v2_chr2_+_93642307_93642388	0.380303	AAGUGCU	ENSMUST00000042078.3|Alx4|ENSMUSG00000040310.6|aristaless-like homeobox 4 	ENSMUST00000111254.1|Alx4|ENSMUSG00000040310.6|aristaless-like homeobox 4
mm10_v2_chrX_-_162643629_162643665	0.376908	AAGUGCU	ENSMUST00000112334.1|Reps2|ENSMUSG00000040855.9|RALBP1 associated Eps domain containing protein 2
mm10_v2_chr12_-_119238794_119238863	0.376809	AAGUGCU	ENSMUST00000026360.8|Itgb8|ENSMUSG00000025321.8|integrin beta 8
mm10_v2_chr11_+_4257557_4257557	0.374575	AAGUGCU	ENSMUST00000066283.5|Lif|ENSMUSG00000034394.8|leukemia inhibitory factor
mm10_v2_chr5_-_25498702_25498745	0.368025	AAGUGCU	ENSMUST00000173073.1|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C 	ENSMUST00000045291.7|Kmt2c|ENSMUSG00000038056.9|lysine (K)-specific methyltransferase 2C
mm10_v2_chr13_-_54055650_54055680	0.365721	AAGUGCU	ENSMUST00000021932.5|Drd1a|ENSMUSG00000021478.5|dopamine receptor D1A
mm10_v2_chr4_-_86612009_86612062	0.365147	AAGUGCU	ENSMUST00000125481.1|Haus6|ENSMUSG00000038047.12|HAUS augmin-like complex, subunit 6 	ENSMUST00000070607.7|Haus6|ENSMUSG00000038047.12|HAUS augmin-like complex, subunit 6
mm10_v2_chr12_+_16894894_16894978	0.364074	AAGUGCU	ENSMUST00000020904.6|Rock2|ENSMUSG00000020580.9|Rho-associated coiled-coil containing protein kinase 2
mm10_v2_chr17_+_78200240_78200258	0.360099	AAGUGCU	ENSMUST00000112498.2|Crim1|ENSMUSG00000024074.7|cysteine rich transmembrane BMP regulator 1 (chordin like)
mm10_v2_chr8_+_22859528_22859554	0.359113	AAGUGCU	ENSMUST00000110696.1|Kat6a|ENSMUSG00000031540.7|K(lysine) acetyltransferase 6A 	ENSMUST00000044331.6|Kat6a|ENSMUSG00000031540.7|K(lysine) acetyltransferase 6A
mm10_v2_chr1_-_40790642_40790686	0.354415	AAGUGCU	ENSMUST00000039672.5|Mfsd9|ENSMUSG00000041945.6|major facilitator superfamily domain containing 9
mm10_v2_chr8_+_46739745_46739791	0.354143	AAGUGCU	ENSMUST00000034041.7|Irf2|ENSMUSG00000031627.7|interferon regulatory factor 2
mm10_v2_chr2_-_33468493_33468572	0.352439	AAGUGCU	ENSMUST00000113156.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000028125.5|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43 	ENSMUST00000126442.1|Zbtb43|ENSMUSG00000026788.7|zinc finger and BTB domain containing 43
mm10_v2_chr3_-_30969399_30969425	0.343273	AAGUGCU	ENSMUST00000177992.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000129817.2|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000168645.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000108255.1|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000064718.5|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila) 	ENSMUST00000099163.3|Phc3|ENSMUSG00000037652.9|polyhomeotic-like 3 (Drosophila)
mm10_v2_chr6_-_28261907_28261943	0.341587	AAGUGCU	ENSMUST00000115320.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000123098.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000115321.2|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800 	ENSMUST00000155494.1|Zfp800|ENSMUSG00000039841.8|zinc finger protein 800
mm10_v2_chr16_+_33380765_33380787	0.340062	AAGUGCU	ENSMUST00000165418.1|Zfp148|ENSMUSG00000022811.10|zinc finger protein 148
mm10_v2_chr12_+_3426857_3426931	0.339694	AAGUGCU	ENSMUST00000111215.3|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000092003.5|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000144247.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000153102.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila)
mm10_v2_chr1_+_167689108_167689239	0.335458	AAGUGCU	ENSMUST00000111377.1|Lmx1a|ENSMUSG00000026686.8|LIM homeobox transcription factor 1 alpha
mm10_v2_chr5_-_20951769_20951824	0.334743	AAGUGCU	ENSMUST00000036489.5|Rsbn1l|ENSMUSG00000039968.5|round spermatid basic protein 1-like
mm10_v2_chr10_-_8886033_8886076	0.329629	AAGUGCU	ENSMUST00000015449.5|Sash1|ENSMUSG00000015305.5|SAM and SH3 domain containing 1
mm10_v2_chr5_+_143464493_143464536	0.327808	AAGUGCU	ENSMUST00000045593.8|Daglb|ENSMUSG00000039206.10|diacylglycerol lipase, beta
mm10_v2_chr14_-_103099499_103099554	0.324806	AAGUGCU	ENSMUST00000022720.8|Fbxl3|ENSMUSG00000022124.8|F-box and leucine-rich repeat protein 3
mm10_v2_chr13_+_43398375_43398402	0.32196	AAGUGCU	ENSMUST00000071926.3|Nol7|ENSMUSG00000063200.3|nucleolar protein 7
mm10_v2_chr5_+_77265454_77265549	0.320025	AAGUGCU	ENSMUST00000080359.5|Rest|ENSMUSG00000029249.9|RE1-silencing transcription factor
mm10_v2_chr7_+_97579868_97579901	0.31916	AAGUGCU	ENSMUST00000042399.7|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1 	ENSMUST00000107153.1|Rsf1|ENSMUSG00000035623.8|remodeling and spacing factor 1
mm10_v2_chr2_-_48949206_48949276	0.318882	AAGUGCU	ENSMUST00000090976.3|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000149679.1|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4 	ENSMUST00000028098.4|Orc4|ENSMUSG00000026761.6|origin recognition complex, subunit 4
mm10_v2_chr4_+_138454305_138454327	0.315467	AAGUGCU	ENSMUST00000050918.3|Camk2n1|ENSMUSG00000046447.3|calcium/calmodulin-dependent protein kinase II inhibitor 1
mm10_v2_chr10_+_93641041_93641056	0.315103	AAGUGCU	ENSMUST00000020204.4|Ntn4|ENSMUSG00000020019.4|netrin 4
mm10_v2_chr7_-_98656530_98656600	0.31378	AAGUGCU	ENSMUST00000038359.4|2210018M11Rik|ENSMUSG00000035401.8|RIKEN cDNA 2210018M11 gene
mm10_v2_chr2_+_155381808_155381884	0.312615	AAGUGCU	ENSMUST00000043237.7|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2 	ENSMUST00000174685.1|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2
mm10_v2_chr1_-_80340480_80340512	0.310345	AAGUGCU	ENSMUST00000163119.1|Cul3|ENSMUSG00000004364.8|cullin 3
mm10_v2_chr2_+_30364227_30364260	0.304037	AAGUGCU	ENSMUST00000077977.7|Fam73b|ENSMUSG00000026858.12|family with sequence similarity 73, member B 	ENSMUST00000140075.2|Fam73b|ENSMUSG00000026858.12|family with sequence similarity 73, member B
mm10_v2_chr5_-_96161990_96162097	0.295558	AAGUGCU	ENSMUST00000155901.1|Cnot6l|ENSMUSG00000034724.11|CCR4-NOT transcription complex, subunit 6-like
mm10_v2_chr2_+_153291404_153291459	0.293827	AAGUGCU	ENSMUST00000028977.6|Kif3b|ENSMUSG00000027475.9|kinesin family member 3B
mm10_v2_chr15_-_94589870_94589889	0.282797	AAGUGCU	ENSMUST00000023087.6|Twf1|ENSMUSG00000022451.6|twinfilin, actin-binding protein, homolog 1 (Drosophila) 	ENSMUST00000152590.1|Twf1|ENSMUSG00000022451.6|twinfilin, actin-binding protein, homolog 1 (Drosophila)
mm10_v2_chr5_-_21701332_21701404	0.281194	AAGUGCU	ENSMUST00000115217.1|Napepld|ENSMUSG00000044968.10|N-acyl phosphatidylethanolamine phospholipase D 	ENSMUST00000060899.8|Napepld|ENSMUSG00000044968.10|N-acyl phosphatidylethanolamine phospholipase D
mm10_v2_chr4_+_141301228_141301250	0.279543	AAGUGCU	ENSMUST00000006614.2|Epha2|ENSMUSG00000006445.3|Eph receptor A2
mm10_v2_chr11_-_5381734_5381745	0.278211	AAGUGCU	ENSMUST00000172492.1|Znrf3|ENSMUSG00000041961.8|zinc and ring finger 3
mm10_v2_chr11_+_60537978_60538074	0.277457	AAGUGCU	ENSMUST00000044250.3|Alkbh5|ENSMUSG00000042650.3|alkB, alkylation repair homolog 5 (E. coli)
mm10_v2_chr2_+_76675265_76675287	0.268601	AAGUGCU	ENSMUST00000111920.1|Plekha3|ENSMUSG00000002733.8|pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3
mm10_v2_chr3_+_32529452_32529527	0.267642	AAGUGCU	ENSMUST00000091257.4|Mfn1|ENSMUSG00000027668.7|mitofusin 1
mm10_v2_chrX_-_78583882_78583901	0.265843	AAGUGCU	ENSMUST00000114025.1|Prrg1|ENSMUSG00000047996.10|proline rich Gla (G-carboxyglutamic acid) 1 	ENSMUST00000134602.1|Prrg1|ENSMUSG00000047996.10|proline rich Gla (G-carboxyglutamic acid) 1 	ENSMUST00000114024.2|Prrg1|ENSMUSG00000047996.10|proline rich Gla (G-carboxyglutamic acid) 1
mm10_v2_chr5_-_66618772_66618828	0.265292	AAGUGCU	ENSMUST00000162994.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159512.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159786.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2
mm10_v2_chr10_+_94147982_94148023	0.26159	AAGUGCU	ENSMUST00000105290.2|Nr2c1|ENSMUSG00000005897.8|nuclear receptor subfamily 2, group C, member 1
mm10_v2_chr5_-_137684665_137684729	0.261209	AAGUGCU	ENSMUST00000100544.4|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2 	ENSMUST00000031736.9|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2 	ENSMUST00000151839.1|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2
mm10_v2_chr4_+_97777606_97777632	0.261083	AAGUGCU	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr3_+_103914560_103914605	0.258139	AAGUGCU	ENSMUST00000106806.1|Rsbn1|ENSMUSG00000044098.8|rosbin, round spermatid basic protein 1
mm10_v2_chr2_+_68861433_68861510	0.255106	AAGUGCU	ENSMUST00000028426.2|Cers6|ENSMUSG00000027035.4|ceramide synthase 6
mm10_v2_chr11_+_97663366_97663414	0.253829	AAGUGCU	ENSMUST00000044730.5|Mllt6|ENSMUSG00000038437.5|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
mm10_v2_chr19_+_8819401_8819401	0.246823	AAGUGCU	ENSMUST00000096753.3|Hnrnpul2|ENSMUSG00000071659.3|heterogeneous nuclear ribonucleoprotein U-like 2
mm10_v2_chr19_+_36834215_36834297	0.245541	AAGUGCU	ENSMUST00000025729.5|Tnks2|ENSMUSG00000024811.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm10_v2_chr13_+_12565868_12565883	0.240655	AAGUGCU	ENSMUST00000071973.6|Ero1lb|ENSMUSG00000057069.6|ERO1-like beta (S. cerevisiae)
mm10_v2_chr3_+_60501252_60501275	0.239953	AAGUGCU	ENSMUST00000099087.2|Mbnl1|ENSMUSG00000027763.8|muscleblind-like 1 (Drosophila)
mm10_v2_chr3_+_14578609_14578687	0.23411	AAGUGCU	ENSMUST00000029069.6|E2f5|ENSMUSG00000027552.8|E2F transcription factor 5 	ENSMUST00000165922.2|E2f5|ENSMUSG00000027552.8|E2F transcription factor 5
mm10_v2_chr14_-_61556881_61556890	0.232529	AAGUGCU	ENSMUST00000022497.8|Spryd7|ENSMUSG00000021930.8|SPRY domain containing 7
mm10_v2_chr6_+_31398735_31398856	0.232032	AAGUGCU	ENSMUST00000026699.8|Mkln1|ENSMUSG00000025609.9|muskelin 1, intracellular mediator containing kelch motifs
mm10_v2_chr3_-_138489372_138489411	0.231287	AAGUGCU	ENSMUST00000029804.8|Metap1|ENSMUSG00000005813.8|methionyl aminopeptidase 1
mm10_v2_chr5_+_139380581_139380707	0.230305	AAGUGCU	ENSMUST00000051293.7|Gpr146|ENSMUSG00000044197.7|G protein-coupled receptor 146
mm10_v2_chr11_+_75679259_75679327	0.230115	AAGUGCU	ENSMUST00000017920.7|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108426.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000108425.1|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian) 	ENSMUST00000093115.3|Crk|ENSMUSG00000017776.9|v-crk sarcoma virus CT10 oncogene homolog (avian)
mm10_v2_chr2_-_157204483_157204542	0.225581	AAGUGCU	ENSMUST00000029170.7|Rbl1|ENSMUSG00000027641.7|retinoblastoma-like 1 (p107)
mm10_v2_chr5_+_73491026_73491110	0.21838	AAGUGCU	ENSMUST00000063882.5|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) 	ENSMUST00000113558.1|Dcun1d4|ENSMUSG00000051674.8|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
mm10_v2_chr3_+_90254163_90254252	0.218029	AAGUGCU	ENSMUST00000029545.8|Crtc2|ENSMUSG00000027936.12|CREB regulated transcription coactivator 2
mm10_v2_chr15_+_54571358_54571439	0.215453	AAGUGCU	ENSMUST00000025356.2|Mal2|ENSMUSG00000024479.2|mal, T cell differentiation protein 2
mm10_v2_chr11_+_49846732_49846758	0.215258	AAGUGCU	ENSMUST00000178543.1|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000164643.1|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000109179.2|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9 	ENSMUST00000020634.7|Mapk9|ENSMUSG00000020366.12|mitogen-activated protein kinase 9
mm10_v2_chr2_-_39065438_39065503	0.214449	AAGUGCU	ENSMUST00000112850.2|Golga1|ENSMUSG00000026754.10|golgi autoantigen, golgin subfamily a, 1
mm10_v2_chr4_+_15265798_15265831	0.2137	AAGUGCU	ENSMUST00000062684.8|Tmem64|ENSMUSG00000043252.8|transmembrane protein 64
mm10_v2_chr6_-_88045190_88045270	0.213073	AAGUGCU	ENSMUST00000113596.1|Rab7|ENSMUSG00000079477.3|RAB7, member RAS oncogene family 	ENSMUST00000113600.3|Rab7|ENSMUSG00000079477.3|RAB7, member RAS oncogene family
mm10_v2_chr11_+_77686155_77686179	0.212488	AAGUGCU	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr5_-_36988922_36988982	0.210146	AAGUGCU	ENSMUST00000166339.1|Wfs1|ENSMUSG00000039474.7|Wolfram syndrome 1 homolog (human) 	ENSMUST00000043964.6|Wfs1|ENSMUSG00000039474.7|Wolfram syndrome 1 homolog (human)
mm10_v2_chr10_+_70440844_70440937	0.20811	AAGUGCU	ENSMUST00000173042.1|Fam13c|ENSMUSG00000043259.8|family with sequence similarity 13, member C 	ENSMUST00000062883.6|Fam13c|ENSMUSG00000043259.8|family with sequence similarity 13, member C
mm10_v2_chr15_+_6708372_6708396	0.207754	AAGUGCU	ENSMUST00000061656.6|Rictor|ENSMUSG00000050310.8|RPTOR independent companion of MTOR, complex 2
mm10_v2_chr18_+_37655891_37655915	0.207291	AAGUGCU	ENSMUST00000097608.2|3222401L13Rik|ENSMUSG00000073590.2|RIKEN cDNA 3222401L13 gene
mm10_v2_chr4_+_53631460_53631505	0.206434	AAGUGCU	ENSMUST00000179534.1|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like 	ENSMUST00000132151.1|Fsd1l|ENSMUSG00000054752.10|fibronectin type III and SPRY domain containing 1-like
mm10_v2_chr4_+_116720920_116721004	0.205855	AAGUGCU	ENSMUST00000045542.6|Tesk2|ENSMUSG00000033985.11|testis-specific kinase 2 	ENSMUST00000106459.1|Tesk2|ENSMUSG00000033985.11|testis-specific kinase 2
mm10_v2_chr9_-_42472198_42472265	0.202294	AAGUGCU	ENSMUST00000128959.1|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like 	ENSMUST00000066148.5|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like 	ENSMUST00000138506.1|Tbcel|ENSMUSG00000037287.8|tubulin folding cofactor E-like
mm10_v2_chr19_-_12796108_12796146	0.201907	AAGUGCU	ENSMUST00000038627.8|Zfp91|ENSMUSG00000024695.9|zinc finger protein 91
mm10_v2_chr11_+_83964419_83964478	0.199672	AAGUGCU	ENSMUST00000049714.8|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000092834.5|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000183714.1|Synrg|ENSMUSG00000034940.9|synergin, gamma 	ENSMUST00000183456.1|Synrg|ENSMUSG00000034940.9|synergin, gamma
mm10_v2_chrX_+_52912232_52912361	0.199058	AAGUGCU	ENSMUST00000078944.6|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000101587.3|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000154864.2|Phf6|ENSMUSG00000025626.10|PHD finger protein 6
mm10_v2_chr9_-_123851855_123851912	0.198806	AAGUGCU	ENSMUST00000184082.1|Fyco1|ENSMUSG00000025241.9|FYVE and coiled-coil domain containing 1 	ENSMUST00000167595.2|Fyco1|ENSMUSG00000025241.9|FYVE and coiled-coil domain containing 1
mm10_v2_chr17_-_15826521_15826590	0.197629	AAGUGCU	ENSMUST00000170578.1|Rgmb|ENSMUSG00000048027.7|RGM domain family, member B
mm10_v2_chr2_-_181592733_181592803	0.196878	AAGUGCU	ENSMUST00000108789.2|Znf512b|ENSMUSG00000000823.10|zinc finger protein 512B 	ENSMUST00000153998.1|Znf512b|ENSMUSG00000000823.10|zinc finger protein 512B
mm10_v2_chr8_-_126593972_126593997	0.195602	AAGUGCU	ENSMUST00000054960.7|Irf2bp2|ENSMUSG00000051495.7|interferon regulatory factor 2 binding protein 2
mm10_v2_chr12_-_72408934_72409054	0.19408	AAGUGCU	ENSMUST00000078505.7|Rtn1|ENSMUSG00000021087.11|reticulon 1
mm10_v2_chr11_-_97575210_97575236	0.1927	AAGUGCU	ENSMUST00000107596.2|Srcin1|ENSMUSG00000038453.9|SRC kinase signaling inhibitor 1
mm10_v2_chr17_+_71781947_71781947	0.191402	AAGUGCU	ENSMUST00000024854.7|Clip4|ENSMUSG00000024059.9|CAP-GLY domain containing linker protein family, member 4
mm10_v2_chr3_+_129532386_129532440	0.189161	AAGUGCU	ENSMUST00000071402.2|Elovl6|ENSMUSG00000041220.6|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm10_v2_chr12_+_105784694_105784872	0.186865	AAGUGCU	ENSMUST00000109901.2|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000168186.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000163473.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000170540.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000166735.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha 	ENSMUST00000170002.1|Papola|ENSMUSG00000021111.9|poly (A) polymerase alpha
mm10_v2_chr13_-_96542479_96542523	0.186034	AAGUGCU	ENSMUST00000022172.4|Polk|ENSMUSG00000021668.8|polymerase (DNA directed), kappa
mm10_v2_chr16_-_37384915_37384931	0.185075	AAGUGCU	ENSMUST00000114787.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114782.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000023526.2|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like 	ENSMUST00000114775.1|Stxbp5l|ENSMUSG00000022829.8|syntaxin binding protein 5-like
mm10_v2_chr10_+_42678890_42678948	0.183781	AAGUGCU	ENSMUST00000040718.5|Ostm1|ENSMUSG00000038280.6|osteopetrosis associated transmembrane protein 1
mm10_v2_chr4_-_132422484_132422497	0.182841	AAGUGCU	ENSMUST00000102568.3|Phactr4|ENSMUSG00000066043.7|phosphatase and actin regulator 4
mm10_v2_chr4_+_55350043_55350078	0.182012	AAGUGCU	ENSMUST00000030134.8|Rad23b|ENSMUSG00000028426.10|RAD23b homolog (S. cerevisiae)
mm10_v2_chr2_+_91457501_91457549	0.179578	AAGUGCU	ENSMUST00000028689.3|Lrp4|ENSMUSG00000027253.9|low density lipoprotein receptor-related protein 4
mm10_v2_chr1_+_178798438_178798467	0.175833	AAGUGCU	ENSMUST00000160789.1|Kif26b|ENSMUSG00000026494.6|kinesin family member 26B
mm10_v2_chr2_+_50066429_50066469	0.175057	AAGUGCU	ENSMUST00000112712.3|Lypd6|ENSMUSG00000050447.9|LY6/PLAUR domain containing 6 	ENSMUST00000128451.1|Lypd6|ENSMUSG00000050447.9|LY6/PLAUR domain containing 6 	ENSMUST00000053208.7|Lypd6|ENSMUSG00000050447.9|LY6/PLAUR domain containing 6
mm10_v2_chr4_-_147904680_147904710	0.169757	AAGUGCU	ENSMUST00000105716.2|Mfn2|ENSMUSG00000029020.7|mitofusin 2 	ENSMUST00000105715.1|Mfn2|ENSMUSG00000029020.7|mitofusin 2 	ENSMUST00000105714.1|Mfn2|ENSMUSG00000029020.7|mitofusin 2 	ENSMUST00000030884.3|Mfn2|ENSMUSG00000029020.7|mitofusin 2
mm10_v2_chrX_+_10252305_10252357	0.168182	AAGUGCU	ENSMUST00000049910.6|Otc|ENSMUSG00000031173.7|ornithine transcarbamylase
mm10_v2_chr9_-_99568849_99568911	0.167655	AAGUGCU	ENSMUST00000035043.5|Armc8|ENSMUSG00000032468.5|armadillo repeat containing 8
mm10_v2_chr8_-_79294928_79294961	0.163857	AAGUGCU	ENSMUST00000048718.2|Mmaa|ENSMUSG00000037022.2|methylmalonic aciduria (cobalamin deficiency) type A
mm10_v2_chr1_+_130717320_130717333	0.163542	AAGUGCU	ENSMUST00000049813.4|Yod1|ENSMUSG00000046404.4|YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)
mm10_v2_chr2_+_152293828_152293861	0.161682	AAGUGCU	ENSMUST00000028963.7|Tbc1d20|ENSMUSG00000027465.7|TBC1 domain family, member 20 	ENSMUST00000144252.1|Tbc1d20|ENSMUSG00000027465.7|TBC1 domain family, member 20
mm10_v2_chr16_-_85173692_85173718	0.159496	AAGUGCU	ENSMUST00000005406.10|App|ENSMUSG00000022892.10|amyloid beta (A4) precursor protein
mm10_v2_chr11_+_29692937_29692997	0.154523	AAGUGCU	ENSMUST00000102843.3|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000102842.3|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000078830.4|Rtn4|ENSMUSG00000020458.10|reticulon 4 	ENSMUST00000170731.1|Rtn4|ENSMUSG00000020458.10|reticulon 4
mm10_v2_chr16_+_57353093_57353117	0.152283	AAGUGCU	ENSMUST00000159816.1|Filip1l|ENSMUSG00000043336.8|filamin A interacting protein 1-like
mm10_v2_chr4_+_124802543_124802678	0.151466	AAGUGCU	ENSMUST00000138807.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000030723.2|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1 	ENSMUST00000175875.1|Mtf1|ENSMUSG00000028890.7|metal response element binding transcription factor 1
mm10_v2_chr1_-_43098622_43098686	0.15012	AAGUGCU	ENSMUST00000095014.1|Tgfbrap1|ENSMUSG00000070939.3|transforming growth factor, beta receptor associated protein 1
mm10_v2_chr12_+_100199435_100199538	0.145255	AAGUGCU	ENSMUST00000110082.3|Calm1|ENSMUSG00000001175.7|calmodulin 1
mm10_v2_chr13_-_37994111_37994190	0.143848	AAGUGCU	ENSMUST00000021864.6|Ssr1|ENSMUSG00000021427.9|signal sequence receptor, alpha
mm10_v2_chr2_-_157566319_157566361	0.142847	AAGUGCU	ENSMUST00000109528.2|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human) 	ENSMUST00000088494.2|Blcap|ENSMUSG00000067787.4|bladder cancer associated protein homolog (human)
mm10_v2_chr2_+_49451486_49451559	0.141142	AAGUGCU	ENSMUST00000092123.4|Epc2|ENSMUSG00000069495.6|enhancer of polycomb homolog 2 (Drosophila)
mm10_v2_chr16_-_32079270_32079368	0.139402	AAGUGCU	ENSMUST00000023467.8|Pak2|ENSMUSG00000022781.8|p21 protein (Cdc42/Rac)-activated kinase 2
mm10_v2_chr10_+_81136223_81136271	0.137924	AAGUGCU	ENSMUST00000048128.8|Zbtb7a|ENSMUSG00000035011.9|zinc finger and BTB domain containing 7a
mm10_v2_chr6_+_86849488_86849628	0.135187	AAGUGCU	ENSMUST00000089519.6|Aak1|ENSMUSG00000057230.7|AP2 associated kinase 1 	ENSMUST00000113668.1|Aak1|ENSMUSG00000057230.7|AP2 associated kinase 1
mm10_v2_chr2_-_63184253_63184292	0.133441	AAGUGCU	ENSMUST00000075052.3|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7 	ENSMUST00000112454.1|Kcnh7|ENSMUSG00000059742.4|potassium voltage-gated channel, subfamily H (eag-related), member 7
mm10_v2_chr2_-_136387929_136387985	0.132638	AAGUGCU	ENSMUST00000035264.2|Pak7|ENSMUSG00000039913.6|p21 protein (Cdc42/Rac)-activated kinase 7 	ENSMUST00000077200.3|Pak7|ENSMUSG00000039913.6|p21 protein (Cdc42/Rac)-activated kinase 7
mm10_v2_chr4_+_119539652_119539698	0.131875	AAGUGCU	ENSMUST00000044564.8|Foxj3|ENSMUSG00000032998.10|forkhead box J3 	ENSMUST00000162267.1|Foxj3|ENSMUSG00000032998.10|forkhead box J3 	ENSMUST00000106310.2|Foxj3|ENSMUSG00000032998.10|forkhead box J3 	ENSMUST00000138845.2|Foxj3|ENSMUSG00000032998.10|forkhead box J3
mm10_v2_chr6_+_120666388_120666424	0.131254	AAGUGCU	ENSMUST00000112686.1|Cecr2|ENSMUSG00000071226.5|cat eye syndrome chromosome region, candidate 2
mm10_v2_chr17_+_34647128_34647180	0.131242	AAGUGCU	ENSMUST00000015605.8|Atf6b|ENSMUSG00000015461.9|activating transcription factor 6 beta 	ENSMUST00000182587.1|Atf6b|ENSMUSG00000015461.9|activating transcription factor 6 beta
mm10_v2_chr14_-_100149764_100149764	0.130659	AAGUGCU	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr7_+_100607410_100607618	0.127378	AAGUGCU	ENSMUST00000107048.1|Rab6a|ENSMUSG00000030704.8|RAB6A, member RAS oncogene family 	ENSMUST00000032946.3|Rab6a|ENSMUSG00000030704.8|RAB6A, member RAS oncogene family
mm10_v2_chr2_-_58357752_58357895	0.126998	AAGUGCU	ENSMUST00000112608.2|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC 	ENSMUST00000112607.2|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC 	ENSMUST00000028178.7|Acvr1c|ENSMUSG00000026834.7|activin A receptor, type IC
mm10_v2_chr10_+_4611971_4612021	0.126786	AAGUGCU	ENSMUST00000105590.1|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha) 	ENSMUST00000067086.7|Esr1|ENSMUSG00000019768.10|estrogen receptor 1 (alpha)
mm10_v2_chr15_-_89841860_89841923	0.126412	AAGUGCU	ENSMUST00000029441.3|Syt10|ENSMUSG00000063260.2|synaptotagmin X
mm10_v2_chr11_-_103749815_103749829	0.126129	AAGUGCU	ENSMUST00000018630.2|Wnt9b|ENSMUSG00000018486.2|wingless-type MMTV integration site 9B
mm10_v2_chr11_+_70844745_70844975	0.124653	AAGUGCU	ENSMUST00000076270.6|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000179114.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000100928.4|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000177731.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000108533.3|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000081362.6|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1 	ENSMUST00000178245.1|Rabep1|ENSMUSG00000020817.10|rabaptin, RAB GTPase binding effector protein 1
mm10_v2_chr18_-_46198810_46198824	0.12305	AAGUGCU	ENSMUST00000167364.1|Trim36|ENSMUSG00000033949.5|tripartite motif-containing 36
mm10_v2_chr19_-_14597983_14598016	0.122037	AAGUGCU	ENSMUST00000052011.7|Tle4|ENSMUSG00000024642.10|transducin-like enhancer of split 4, homolog of Drosophila E(spl)
mm10_v2_chr5_+_28317121_28317220	0.121983	AAGUGCU	ENSMUST00000090355.4|Rbm33|ENSMUSG00000048271.8|RNA binding motif protein 33 	ENSMUST00000114884.1|Rbm33|ENSMUSG00000048271.8|RNA binding motif protein 33 	ENSMUST00000059644.6|Rbm33|ENSMUSG00000048271.8|RNA binding motif protein 33 	ENSMUST00000030920.4|Rbm33|ENSMUSG00000048271.8|RNA binding motif protein 33
mm10_v2_chr11_+_76672456_76672470	0.121966	AAGUGCU	ENSMUST00000056184.1|Bhlha9|ENSMUSG00000044243.3|basic helix-loop-helix family, member a9
mm10_v2_chr6_+_114643094_114643105	0.119795	AAGUGCU	ENSMUST00000032457.10|Atg7|ENSMUSG00000030314.10|autophagy related 7
mm10_v2_chr11_-_103267405_103267472	0.119561	AAGUGCU	ENSMUST00000021324.2|Map3k14|ENSMUSG00000020941.7|mitogen-activated protein kinase kinase kinase 14
mm10_v2_chr6_-_56797637_56797757	0.116771	AAGUGCU	ENSMUST00000114323.1|Kbtbd2|ENSMUSG00000059486.5|kelch repeat and BTB (POZ) domain containing 2
mm10_v2_chr2_+_75832168_75832194	0.115394	AAGUGCU	ENSMUST00000047232.7|Agps|ENSMUSG00000042410.9|alkylglycerone phosphate synthase 	ENSMUST00000111952.2|Agps|ENSMUSG00000042410.9|alkylglycerone phosphate synthase
mm10_v2_chr11_-_6475992_6476102	0.11439	AAGUGCU	ENSMUST00000179343.1|Purb|ENSMUSG00000094483.1|purine rich element binding protein B
mm10_v2_chr6_+_122819888_122819938	0.114036	AAGUGCU	ENSMUST00000003238.7|Foxj2|ENSMUSG00000003154.9|forkhead box J2
mm10_v2_chr4_+_116221633_116221661	0.11265	AAGUGCU	ENSMUST00000030464.7|Pik3r3|ENSMUSG00000028698.7|phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55)
mm10_v2_chr10_+_111164794_111164811	0.109325	AAGUGCU	ENSMUST00000105275.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8 	ENSMUST00000095310.1|Osbpl8|ENSMUSG00000020189.7|oxysterol binding protein-like 8
mm10_v2_chr3_+_30792876_30792876	0.107957	AAGUGCU	ENSMUST00000029256.7|Sec62|ENSMUSG00000027706.7|SEC62 homolog (S. cerevisiae)
mm10_v2_chr18_+_61555258_61555290	0.106465	AAGUGCU	ENSMUST00000165123.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr11_-_70687917_70687981	0.104095	AAGUGCU	ENSMUST00000108545.2|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000120261.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000036299.7|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000119120.1|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2 	ENSMUST00000100933.3|Camta2|ENSMUSG00000040712.10|calmodulin binding transcription activator 2
mm10_v2_chr7_-_98309471_98309538	0.103972	AAGUGCU	ENSMUST00000033020.7|Acer3|ENSMUSG00000030760.8|alkaline ceramidase 3
mm10_v2_chr10_+_110920170_110920188	0.103078	AAGUGCU	ENSMUST00000020403.5|Csrp2|ENSMUSG00000020186.6|cysteine and glycine-rich protein 2
mm10_v2_chrX_+_99821021_99821021	0.100609	AAGUGCU	ENSMUST00000096363.2|Tmem28|ENSMUSG00000071719.2|transmembrane protein 28
mm10_v2_chr5_-_143732273_143732316	0.100166	AAGUGCU	ENSMUST00000053287.5|Usp42|ENSMUSG00000051306.7|ubiquitin specific peptidase 42
mm10_v2_chr15_-_36794498_36794547	0.0999885	AAGUGCU	ENSMUST00000110361.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000022894.7|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000110359.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm10_v2_chr1_-_165934900_165935036	0.0960532	AAGUGCU	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr11_+_105589970_105590028	0.0951625	AAGUGCU	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chr10_-_41072279_41072290	0.0949772	AAGUGCU	ENSMUST00000061796.6|Gpr6|ENSMUSG00000046922.6|G protein-coupled receptor 6
mm10_v2_chr2_+_152226839_152226908	0.0896934	AAGUGCU	ENSMUST00000099224.3|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000124791.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000133119.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide
mm10_v2_chr11_-_98587193_98587368	0.0878245	AAGUGCU	ENSMUST00000052919.7|Ormdl3|ENSMUSG00000038150.7|ORM1-like 3 (S. cerevisiae)
mm10_v2_chr4_+_33031371_33031524	0.0863414	AAGUGCU	ENSMUST00000124992.1|Ube2j1|ENSMUSG00000028277.7|ubiquitin-conjugating enzyme E2J 1
mm10_v2_chr2_-_119477613_119477705	0.0854192	AAGUGCU	ENSMUST00000110808.1|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae) 	ENSMUST00000049920.7|Ino80|ENSMUSG00000034154.9|INO80 homolog (S. cerevisiae)
mm10_v2_chr13_-_45964964_45965001	0.0844035	AAGUGCU	ENSMUST00000180110.1|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000091628.3|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000167708.2|Atxn1|ENSMUSG00000046876.9|ataxin 1
mm10_v2_chr16_-_31275277_31275290	0.082061	AAGUGCU	ENSMUST00000060188.7|Ppp1r2|ENSMUSG00000047714.8|protein phosphatase 1, regulatory (inhibitor) subunit 2
mm10_v2_chr15_-_58135047_58135095	0.0818192	AAGUGCU	ENSMUST00000038194.3|Atad2|ENSMUSG00000022360.7|ATPase family, AAA domain containing 2
mm10_v2_chr2_+_164832862_164832878	0.0796789	AAGUGCU	ENSMUST00000103093.3|Ctsa|ENSMUSG00000017760.9|cathepsin A 	ENSMUST00000017904.2|Ctsa|ENSMUSG00000017760.9|cathepsin A
mm10_v2_chr3_-_144570136_144570227	0.0770143	AAGUGCU	ENSMUST00000043325.7|Hs2st1|ENSMUSG00000040151.8|heparan sulfate 2-O-sulfotransferase 1
mm10_v2_chr12_-_75177325_75177359	0.0760076	AAGUGCU	ENSMUST00000042299.2|Kcnh5|ENSMUSG00000034402.2|potassium voltage-gated channel, subfamily H (eag-related), member 5
mm10_v2_chr15_+_39006272_39006365	0.073462	AAGUGCU	ENSMUST00000179165.1|Fzd6|ENSMUSG00000022297.8|frizzled homolog 6 (Drosophila) 	ENSMUST00000022906.7|Fzd6|ENSMUSG00000022297.8|frizzled homolog 6 (Drosophila)
mm10_v2_chr9_+_15306212_15306219	0.0730644	AAGUGCU	ENSMUST00000034415.5|Taf1d|ENSMUSG00000031939.9|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D 	ENSMUST00000164079.1|Taf1d|ENSMUSG00000031939.9|TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D
mm10_v2_chr14_-_105176860_105176918	0.0719808	AAGUGCU	ENSMUST00000163545.1|Rbm26|ENSMUSG00000022119.9|RNA binding motif protein 26
mm10_v2_chr6_-_51469869_51469894	0.0719669	AAGUGCU	ENSMUST00000114459.1|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1 	ENSMUST00000069949.6|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1
mm10_v2_chr11_+_29373618_29373777	0.0714064	AAGUGCU	ENSMUST00000040182.6|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A 	ENSMUST00000109477.1|Ccdc88a|ENSMUSG00000032740.10|coiled coil domain containing 88A
mm10_v2_chr10_-_118868903_118868903	0.0705071	AAGUGCU	ENSMUST00000004281.8|Dyrk2|ENSMUSG00000028630.8|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm10_v2_chr4_+_41135743_41135898	0.0699223	AAGUGCU	ENSMUST00000040008.3|Ube2r2|ENSMUSG00000036241.3|ubiquitin-conjugating enzyme E2R 2
mm10_v2_chr15_+_102073773_102073903	0.0698214	AAGUGCU	ENSMUST00000169681.1|Eif4b|ENSMUSG00000058655.8|eukaryotic translation initiation factor 4B
mm10_v2_chr11_+_116030304_116030385	0.0676931	AAGUGCU	ENSMUST00000021116.5|Unk|ENSMUSG00000020770.7|unkempt homolog (Drosophila) 	ENSMUST00000106452.1|Unk|ENSMUSG00000020770.7|unkempt homolog (Drosophila)
mm10_v2_chr19_-_10240689_10240751	0.0671591	AAGUGCU	ENSMUST00000088013.5|Myrf|ENSMUSG00000036098.9|myelin regulatory factor
mm10_v2_chrX_-_94123359_94123412	0.0657658	AAGUGCU	ENSMUST00000137853.1|Zfx|ENSMUSG00000079509.4|zinc finger protein X-linked 	ENSMUST00000088102.5|Zfx|ENSMUSG00000079509.4|zinc finger protein X-linked 	ENSMUST00000113927.1|Zfx|ENSMUSG00000079509.4|zinc finger protein X-linked
mm10_v2_chr4_-_45012287_45012412	0.0651279	AAGUGCU	ENSMUST00000055028.8|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5 	ENSMUST00000180217.1|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5 	ENSMUST00000107817.2|Zbtb5|ENSMUSG00000049657.9|zinc finger and BTB domain containing 5
mm10_v2_chr8_+_14911663_14911742	0.0648035	AAGUGCU	ENSMUST00000084207.5|Arhgef10|ENSMUSG00000071176.4|Rho guanine nucleotide exchange factor (GEF) 10 	ENSMUST00000161162.1|Arhgef10|ENSMUSG00000071176.4|Rho guanine nucleotide exchange factor (GEF) 10 	ENSMUST00000110800.2|Arhgef10|ENSMUSG00000071176.4|Rho guanine nucleotide exchange factor (GEF) 10
mm10_v2_chr18_+_76241580_76241741	0.0643578	AAGUGCU	ENSMUST00000168423.1|Smad2|ENSMUSG00000024563.9|SMAD family member 2 	ENSMUST00000091831.6|Smad2|ENSMUSG00000024563.9|SMAD family member 2
mm10_v2_chr12_-_84970814_84970900	0.0621594	AAGUGCU	ENSMUST00000165886.1|Arel1|ENSMUSG00000042350.7|apoptosis resistant E3 ubiquitin protein ligase 1 	ENSMUST00000167448.1|Arel1|ENSMUSG00000042350.7|apoptosis resistant E3 ubiquitin protein ligase 1 	ENSMUST00000043169.7|Arel1|ENSMUSG00000042350.7|apoptosis resistant E3 ubiquitin protein ligase 1
mm10_v2_chr3_+_90052814_90052936	0.0615946	AAGUGCU	ENSMUST00000160640.1|4933434E20Rik|ENSMUSG00000027942.10|RIKEN cDNA 4933434E20 gene 	ENSMUST00000029552.6|4933434E20Rik|ENSMUSG00000027942.10|RIKEN cDNA 4933434E20 gene 	ENSMUST00000162114.1|4933434E20Rik|ENSMUSG00000027942.10|RIKEN cDNA 4933434E20 gene 	ENSMUST00000068798.6|4933434E20Rik|ENSMUSG00000027942.10|RIKEN cDNA 4933434E20 gene
mm10_v2_chr1_-_9700209_9700329	0.0597659	AAGUGCU	ENSMUST00000088658.4|Mybl1|ENSMUSG00000025912.10|myeloblastosis oncogene-like 1
mm10_v2_chr6_-_55681257_55681271	0.059467	AAGUGCU	ENSMUST00000044767.8|Neurod6|ENSMUSG00000037984.8|neurogenic differentiation 6
mm10_v2_chr2_+_73271925_73271939	0.0593804	AAGUGCU	ENSMUST00000090813.5|Sp9|ENSMUSG00000068859.5|trans-acting transcription factor 9
mm10_v2_chr19_+_40831248_40831292	0.0589864	AAGUGCU	ENSMUST00000025983.6|Ccnj|ENSMUSG00000025010.7|cyclin J 	ENSMUST00000120057.1|Ccnj|ENSMUSG00000025010.7|cyclin J
mm10_v2_chr8_-_35495487_35495545	0.058377	AAGUGCU	ENSMUST00000033927.6|Eri1|ENSMUSG00000031527.6|exoribonuclease 1
mm10_v2_chr6_-_116193426_116193501	0.0583081	AAGUGCU	ENSMUST00000088896.3|Tmcc1|ENSMUSG00000030126.11|transmembrane and coiled coil domains 1
mm10_v2_chr13_-_77135416_77135491	0.0576126	AAGUGCU	ENSMUST00000159462.1|Ankrd32|ENSMUSG00000021597.10|ankyrin repeat domain 32 	ENSMUST00000151524.2|Ankrd32|ENSMUSG00000021597.10|ankyrin repeat domain 32
mm10_v2_chr19_-_4928241_4928287	0.0574545	AAGUGCU	ENSMUST00000025851.3|Dpp3|ENSMUSG00000063904.3|dipeptidylpeptidase 3
mm10_v2_chr9_-_110462436_110462480	0.0565177	AAGUGCU	ENSMUST00000111933.1|Klhl18|ENSMUSG00000054792.9|kelch-like 18
mm10_v2_chr14_-_57746044_57746144	0.0547686	AAGUGCU	ENSMUST00000173990.1|Lats2|ENSMUSG00000021959.9|large tumor suppressor 2 	ENSMUST00000022531.7|Lats2|ENSMUSG00000021959.9|large tumor suppressor 2
mm10_v2_chr11_-_90390895_90390926	0.0544183	AAGUGCU	ENSMUST00000004051.7|Hlf|ENSMUSG00000003949.10|hepatic leukemia factor
mm10_v2_chr13_-_58113592_58113620	0.053276	AAGUGCU	ENSMUST00000160860.1|Klhl3|ENSMUSG00000014164.8|kelch-like 3
mm10_v2_chr2_+_132263136_132263268	0.0517602	AAGUGCU	ENSMUST00000110158.1|Cds2|ENSMUSG00000058793.8|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 	ENSMUST00000103181.4|Cds2|ENSMUSG00000058793.8|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
mm10_v2_chr1_-_180697034_180697034	0.0509584	AAGUGCU	ENSMUST00000027778.7|Mixl1|ENSMUSG00000026497.7|Mix1 homeobox-like 1 (Xenopus laevis)
mm10_v2_chr6_+_85423886_85423886	0.048722	AAGUGCU	ENSMUST00000089578.7|Noto|ENSMUSG00000068302.7|notochord homolog (Xenopus laevis)
mm10_v2_chr8_+_106059562_106059623	0.0472808	AAGUGCU	ENSMUST00000109308.1|Nfatc3|ENSMUSG00000031902.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3
mm10_v2_chr6_+_122874526_122874573	0.0471147	AAGUGCU	ENSMUST00000032477.4|Necap1|ENSMUSG00000030327.6|NECAP endocytosis associated 1
mm10_v2_chr4_+_6191093_6191122	0.0470631	AAGUGCU	ENSMUST00000029907.5|Ubxn2b|ENSMUSG00000028243.5|UBX domain protein 2B
mm10_v2_chr9_+_57537518_57537577	0.0466852	AAGUGCU	ENSMUST00000114200.2|Fam219b|ENSMUSG00000032305.8|family with sequence similarity 219, member B 	ENSMUST00000093833.4|Fam219b|ENSMUSG00000032305.8|family with sequence similarity 219, member B
mm10_v2_chr15_+_79108911_79108982	0.0455268	AAGUGCU	ENSMUST00000040320.8|Micall1|ENSMUSG00000033039.9|microtubule associated monooxygenase, calponin and LIM domain containing -like 1
mm10_v2_chr1_-_119837613_119837673	0.0442517	AAGUGCU	ENSMUST00000064091.5|Ptpn4|ENSMUSG00000026384.7|protein tyrosine phosphatase, non-receptor type 4
mm10_v2_chr5_-_114273702_114273807	0.0430149	AAGUGCU	ENSMUST00000144050.1|Foxn4|ENSMUSG00000042002.5|forkhead box N4 	ENSMUST00000044790.5|Foxn4|ENSMUSG00000042002.5|forkhead box N4
mm10_v2_chr13_+_16014457_16014475	0.0425246	AAGUGCU	ENSMUST00000164993.1|Inhba|ENSMUSG00000041324.7|inhibin beta-A
mm10_v2_chr6_+_92091378_92091390	0.0415531	AAGUGCU	ENSMUST00000113460.1|Nr2c2|ENSMUSG00000005893.8|nuclear receptor subfamily 2, group C, member 2
mm10_v2_chrX_+_160768013_160768122	0.0409153	AAGUGCU	ENSMUST00000033650.7|Rs1|ENSMUSG00000031293.7|retinoschisis (X-linked, juvenile) 1 (human)
mm10_v2_chr16_+_20651652_20651712	0.039149	AAGUGCU	ENSMUST00000007212.8|Psmd2|ENSMUSG00000006998.9|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
mm10_v2_chr15_+_26309039_26309064	0.038947	AAGUGCU	ENSMUST00000140840.1|March11|ENSMUSG00000022269.7|membrane-associated ring finger (C3HC4) 11 	ENSMUST00000152841.1|March11|ENSMUSG00000022269.7|membrane-associated ring finger (C3HC4) 11
mm10_v2_chr19_+_36926071_36926177	0.0383159	AAGUGCU	ENSMUST00000099494.3|Btaf1|ENSMUSG00000040565.7|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)
mm10_v2_chr4_+_32983008_32983155	0.0378792	AAGUGCU	ENSMUST00000098190.3|Rragd|ENSMUSG00000028278.8|Ras-related GTP binding D 	ENSMUST00000029946.7|Rragd|ENSMUSG00000028278.8|Ras-related GTP binding D
mm10_v2_chr1_-_185329331_185329401	0.0368715	AAGUGCU	ENSMUST00000027921.4|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110975.1|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial 	ENSMUST00000110974.3|Iars2|ENSMUSG00000026618.5|isoleucine-tRNA synthetase 2, mitochondrial
mm10_v2_chr16_+_91225550_91225579	0.0368081	AAGUGCU	ENSMUST00000035608.8|Olig2|ENSMUSG00000039830.8|oligodendrocyte transcription factor 2
mm10_v2_chr12_-_54862783_54862921	0.0345248	AAGUGCU	ENSMUST00000078124.7|Cfl2|ENSMUSG00000062929.7|cofilin 2, muscle
mm10_v2_chr5_+_137518880_137518880	0.0330884	AAGUGCU	ENSMUST00000031727.7|Gigyf1|ENSMUSG00000029714.7|GRB10 interacting GYF protein 1
mm10_v2_chr1_-_74124420_74124466	0.032894	AAGUGCU	ENSMUST00000169786.1|Tns1|ENSMUSG00000055322.8|tensin 1
mm10_v2_chr17_+_26973161_26973219	0.0323116	AAGUGCU	ENSMUST00000120016.1|Zbtb9|ENSMUSG00000079605.4|zinc finger and BTB domain containing 9 	ENSMUST00000133257.1|Ggnbp1|ENSMUSG00000048731.8|gametogenetin binding protein 1
mm10_v2_chr9_+_27790947_27790991	0.0311226	AAGUGCU	ENSMUST00000115243.2|Opcml|ENSMUSG00000062257.6|opioid binding protein/cell adhesion molecule-like
mm10_v2_chr11_-_78536235_78536332	0.0263813	AAGUGCU	ENSMUST00000017759.2|Tnfaip1|ENSMUSG00000017615.6|tumor necrosis factor, alpha-induced protein 1 (endothelial) 	ENSMUST00000108277.2|Tnfaip1|ENSMUSG00000017615.6|tumor necrosis factor, alpha-induced protein 1 (endothelial)
mm10_v2_chr6_+_47835650_47835725	0.0258059	AAGUGCU	ENSMUST00000079881.4|Zfp398|ENSMUSG00000062519.7|zinc finger protein 398 	ENSMUST00000114598.1|Zfp398|ENSMUSG00000062519.7|zinc finger protein 398
mm10_v2_chr15_-_12824605_12824657	0.023835	AAGUGCU	ENSMUST00000057256.3|6030458C11Rik|ENSMUSG00000022195.6|RIKEN cDNA 6030458C11 gene
mm10_v2_chrX_+_7722214_7722260	0.0225981	AAGUGCU	ENSMUST00000043045.2|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000116634.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000115689.3|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000131077.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000115688.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45 	ENSMUST00000116633.1|Wdr45|ENSMUSG00000039382.5|WD repeat domain 45
mm10_v2_chr13_-_38635036_38635119	0.0213266	AAGUGCU	ENSMUST00000035899.6|Bloc1s5|ENSMUSG00000038982.9|biogenesis of organelles complex-1, subunit 5, muted
mm10_v2_chr1_-_93305850_93305915	0.0209994	AAGUGCU	ENSMUST00000112944.1|Mterfd2|ENSMUSG00000026273.7|MTERF domain containing 2 	ENSMUST00000112942.1|Mterfd2|ENSMUSG00000026273.7|MTERF domain containing 2 	ENSMUST00000027492.7|Mterfd2|ENSMUSG00000026273.7|MTERF domain containing 2
mm10_v2_chr11_+_76202007_76202030	0.0202118	AAGUGCU	ENSMUST00000094014.3|Fam57a|ENSMUSG00000069808.7|family with sequence similarity 57, member A
mm10_v2_chr7_+_36698002_36698118	0.0187551	AAGUGCU	ENSMUST00000021641.6|Tshz3|ENSMUSG00000021217.6|teashirt zinc finger family member 3
mm10_v2_chr16_-_35769356_35769384	0.017967	AAGUGCU	ENSMUST00000023554.8|Dirc2|ENSMUSG00000022848.8|disrupted in renal carcinoma 2 (human)
mm10_v2_chr11_+_102284931_102285033	0.0168262	AAGUGCU	ENSMUST00000036376.6|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2 	ENSMUST00000100387.4|Tmub2|ENSMUSG00000034757.9|transmembrane and ubiquitin-like domain containing 2
mm10_v2_chr1_+_104768510_104768529	0.0161884	AAGUGCU	ENSMUST00000062528.8|Cdh20|ENSMUSG00000050840.8|cadherin 20
mm10_v2_chr15_-_103340085_103340100	0.0158976	AAGUGCU	ENSMUST00000168828.1|Zfp385a|ENSMUSG00000000552.9|zinc finger protein 385A
mm10_v2_chr17_+_8283762_8283852	0.0138925	AAGUGCU	ENSMUST00000155364.1|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1 	ENSMUST00000046754.8|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1 	ENSMUST00000124023.1|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1
mm10_v2_chr6_-_121003099_121003153	0.013424	AAGUGCU	ENSMUST00000098457.2|Mical3|ENSMUSG00000051586.8|microtubule associated monooxygenase, calponin and LIM domain containing 3 	ENSMUST00000150503.1|Mical3|ENSMUSG00000051586.8|microtubule associated monooxygenase, calponin and LIM domain containing 3
mm10_v2_chr3_+_116594959_116595031	0.013037	AAGUGCU	ENSMUST00000029571.8|Sass6|ENSMUSG00000027959.9|spindle assembly 6 homolog (C. elegans)
mm10_v2_chr14_-_103844173_103844198	0.00940907	AAGUGCU	ENSMUST00000022718.3|Ednrb|ENSMUSG00000022122.8|endothelin receptor type B
mm10_v2_chr14_-_79247296_79247296	0.00936791	AAGUGCU	ENSMUST00000161649.1|Zfp957|ENSMUSG00000071262.3|zinc finger protein 957
mm10_v2_chr1_-_166002591_166002609	0.00588641	AAGUGCU	ENSMUST00000111429.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000176800.1|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr4_+_58285930_58285975	0.00579304	AAGUGCU	ENSMUST00000081919.5|Musk|ENSMUSG00000057280.9|muscle, skeletal, receptor tyrosine kinase 	ENSMUST00000102893.3|Musk|ENSMUSG00000057280.9|muscle, skeletal, receptor tyrosine kinase 	ENSMUST00000084578.5|Musk|ENSMUSG00000057280.9|muscle, skeletal, receptor tyrosine kinase 	ENSMUST00000098057.3|Musk|ENSMUSG00000057280.9|muscle, skeletal, receptor tyrosine kinase 	ENSMUST00000179951.1|Musk|ENSMUSG00000057280.9|muscle, skeletal, receptor tyrosine kinase 	ENSMUST00000098059.3|Musk|ENSMUSG00000057280.9|muscle, skeletal, receptor tyrosine kinase 	ENSMUST00000177951.1|Musk|ENSMUSG00000057280.9|muscle, skeletal, receptor tyrosine kinase
mm10_v2_chr8_-_84147858_84147942	0.00442663	AAGUGCU	ENSMUST00000117424.2|Cc2d1a|ENSMUSG00000036686.10|coiled-coil and C2 domain containing 1A 	ENSMUST00000040383.8|Cc2d1a|ENSMUSG00000036686.10|coiled-coil and C2 domain containing 1A
mm10_v2_chr1_-_16619437_16619489	0.00100014	AAGUGCU	ENSMUST00000117146.1|Ube2w|ENSMUSG00000025939.11|ubiquitin-conjugating enzyme E2W (putative)
