mm10_v2_chr10_+_84838143_84838153	7.89275	AAGGCAC	ENSMUST00000095388.4|Rfx4|ENSMUSG00000020037.9|regulatory factor X, 4 (influences HLA class II expression)
mm10_v2_chr19_-_44407703_44407712	6.87139	AAGGCAC	ENSMUST00000041331.2|Scd1|ENSMUSG00000037071.2|stearoyl-Coenzyme A desaturase 1
mm10_v2_chr1_+_166254095_166254156	6.85863	AAGGCAC	ENSMUST00000111416.1|Ildr2|ENSMUSG00000040612.8|immunoglobulin-like domain containing receptor 2
mm10_v2_chr4_-_105109829_105109913	6.66975	AAGGCAC	ENSMUST00000030243.7|Prkaa2|ENSMUSG00000028518.8|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm10_v2_chr9_-_70141484_70141578	4.36641	AAGGCAC	ENSMUST00000034749.8|Fam81a|ENSMUSG00000032224.8|family with sequence similarity 81, member A
mm10_v2_chr10_+_128933782_128933828	4.23893	AAGGCAC	ENSMUST00000099112.2|Itga7|ENSMUSG00000025348.8|integrin alpha 7
mm10_v2_chr18_-_61536522_61536558	4.1639	AAGGCAC	ENSMUST00000171629.1|Arhgef37|ENSMUSG00000045094.7|Rho guanine nucleotide exchange factor (GEF) 37
mm10_v2_chr8_+_76899772_76899828	4.15951	AAGGCAC	ENSMUST00000109913.2|Nr3c2|ENSMUSG00000031618.7|nuclear receptor subfamily 3, group C, member 2
mm10_v2_chr8_+_85492568_85492626	4.1533	AAGGCAC	ENSMUST00000034136.5|Gpt2|ENSMUSG00000031700.5|glutamic pyruvate transaminase (alanine aminotransferase) 2
mm10_v2_chr7_+_51879041_51879064	4.00873	AAGGCAC	ENSMUST00000107591.2|Gas2|ENSMUSG00000030498.8|growth arrest specific 2
mm10_v2_chr10_-_83337845_83337882	3.95325	AAGGCAC	ENSMUST00000039956.5|Slc41a2|ENSMUSG00000034591.5|solute carrier family 41, member 2
mm10_v2_chr19_+_32619997_32620031	3.88159	AAGGCAC	ENSMUST00000025833.6|Papss2|ENSMUSG00000024899.6|3'-phosphoadenosine 5'-phosphosulfate synthase 2
mm10_v2_chr12_-_98577940_98578046	3.83815	AAGGCAC	ENSMUST00000110113.1|Kcnk10|ENSMUSG00000033854.9|potassium channel, subfamily K, member 10
mm10_v2_chr9_+_77917364_77917386	3.79958	AAGGCAC	ENSMUST00000034904.7|Elovl5|ENSMUSG00000032349.7|ELOVL family member 5, elongation of long chain fatty acids (yeast)
mm10_v2_chr16_-_23988852_23988852	3.73832	AAGGCAC	ENSMUST00000023151.5|Bcl6|ENSMUSG00000022508.5|B cell leukemia/lymphoma 6
mm10_v2_chr1_+_16105774_16105870	3.58658	AAGGCAC	ENSMUST00000027053.7|Rdh10|ENSMUSG00000025921.7|retinol dehydrogenase 10 (all-trans)
mm10_v2_chr6_+_42245907_42245977	3.4538	AAGGCAC	ENSMUST00000031897.5|Gstk1|ENSMUSG00000029864.5|glutathione S-transferase kappa 1
mm10_v2_chr7_-_81454751_81454764	3.37731	AAGGCAC	ENSMUST00000098331.3|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1 	ENSMUST00000178892.1|Cpeb1|ENSMUSG00000025586.10|cytoplasmic polyadenylation element binding protein 1
mm10_v2_chr17_+_73107982_73108080	3.35172	AAGGCAC	ENSMUST00000130574.1|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1 	ENSMUST00000149064.1|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1 	ENSMUST00000067545.6|Lclat1|ENSMUSG00000054469.7|lysocardiolipin acyltransferase 1
mm10_v2_chr8_+_35375719_35375766	3.34578	AAGGCAC	ENSMUST00000070481.6|Ppp1r3b|ENSMUSG00000046794.8|protein phosphatase 1, regulatory (inhibitor) subunit 3B
mm10_v2_chr15_+_25843264_25843280	3.34245	AAGGCAC	ENSMUST00000022881.7|Fam134b|ENSMUSG00000022270.9|family with sequence similarity 134, member B
mm10_v2_chr4_+_137862237_137862249	3.30324	AAGGCAC	ENSMUST00000102518.3|Ece1|ENSMUSG00000057530.8|endothelin converting enzyme 1
mm10_v2_chr18_-_10706688_10706771	3.30046	AAGGCAC	ENSMUST00000002549.7|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3 	ENSMUST00000117726.1|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3 	ENSMUST00000117828.1|Abhd3|ENSMUSG00000002475.9|abhydrolase domain containing 3
mm10_v2_chr18_-_16809233_16809324	3.19783	AAGGCAC	ENSMUST00000025166.7|Cdh2|ENSMUSG00000024304.8|cadherin 2
mm10_v2_chr6_-_120294559_120294559	3.18489	AAGGCAC	ENSMUST00000057283.7|B4galnt3|ENSMUSG00000041372.9|beta-1,4-N-acetyl-galactosaminyl transferase 3
mm10_v2_chr7_+_65862029_65862140	3.18232	AAGGCAC	ENSMUST00000055576.5|Pcsk6|ENSMUSG00000030513.8|proprotein convertase subtilisin/kexin type 6 	ENSMUST00000098391.4|Pcsk6|ENSMUSG00000030513.8|proprotein convertase subtilisin/kexin type 6
mm10_v2_chr4_-_41503046_41503122	3.17318	AAGGCAC	ENSMUST00000054920.4|AI464131|ENSMUSG00000046312.4|expressed sequence AI464131
mm10_v2_chr12_-_104865076_104865138	3.12738	AAGGCAC	ENSMUST00000109937.1|Clmn|ENSMUSG00000021097.8|calmin 	ENSMUST00000109936.1|Clmn|ENSMUSG00000021097.8|calmin
mm10_v2_chr9_-_42264226_42264300	3.11771	AAGGCAC	ENSMUST00000052725.7|Sc5d|ENSMUSG00000032018.7|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)
mm10_v2_chr8_-_84800024_84800283	3.08709	AAGGCAC	ENSMUST00000126806.1|Nfix|ENSMUSG00000001911.10|nuclear factor I/X 	ENSMUST00000076715.6|Nfix|ENSMUSG00000001911.10|nuclear factor I/X
mm10_v2_chr19_+_7494033_7494068	3.07271	AAGGCAC	ENSMUST00000170373.1|Atl3|ENSMUSG00000024759.7|atlastin GTPase 3
mm10_v2_chr1_+_57377593_57377689	3.03339	AAGGCAC	ENSMUST00000042734.2|1700066M21Rik|ENSMUSG00000038323.2|RIKEN cDNA 1700066M21 gene
mm10_v2_chr19_-_42202150_42202252	2.97043	AAGGCAC	ENSMUST00000018966.7|Sfrp5|ENSMUSG00000018822.7|secreted frizzled-related sequence protein 5
mm10_v2_chr14_-_47189406_47189419	2.9407	AAGGCAC	ENSMUST00000089959.6|Gch1|ENSMUSG00000037580.9|GTP cyclohydrolase 1
mm10_v2_chr8_+_128359065_128359085	2.93412	AAGGCAC	ENSMUST00000026917.8|Nrp1|ENSMUSG00000025810.8|neuropilin 1
mm10_v2_chr10_+_41519493_41519516	2.91413	AAGGCAC	ENSMUST00000019962.8|Cd164|ENSMUSG00000019818.9|CD164 antigen
mm10_v2_chr7_-_81706905_81706964	2.8646	AAGGCAC	ENSMUST00000026922.7|Homer2|ENSMUSG00000025813.7|homer homolog 2 (Drosophila)
mm10_v2_chr16_+_44173239_44173270	2.80073	AAGGCAC	ENSMUST00000119746.1|Gm608|ENSMUSG00000068284.8|predicted gene 608
mm10_v2_chr18_-_39490649_39490717	2.71499	AAGGCAC	ENSMUST00000115567.1|Nr3c1|ENSMUSG00000024431.8|nuclear receptor subfamily 3, group C, member 1
mm10_v2_chr9_+_70207342_70207356	2.69757	AAGGCAC	ENSMUST00000034745.7|Myo1e|ENSMUSG00000032220.9|myosin IE
mm10_v2_chr19_-_29047847_29047977	2.69712	AAGGCAC	ENSMUST00000025696.4|Ak3|ENSMUSG00000024782.7|adenylate kinase 3
mm10_v2_chr13_-_95891905_95891929	2.66788	AAGGCAC	ENSMUST00000068603.6|Iqgap2|ENSMUSG00000021676.9|IQ motif containing GTPase activating protein 2
mm10_v2_chr2_-_126933229_126933241	2.60447	AAGGCAC	ENSMUST00000028844.4|Sppl2a|ENSMUSG00000027366.6|signal peptide peptidase like 2A
mm10_v2_chr2_-_164443177_164443194	2.59195	AAGGCAC	ENSMUST00000017153.3|Sdc4|ENSMUSG00000017009.3|syndecan 4
mm10_v2_chr9_-_43239816_43239842	2.5632	AAGGCAC	ENSMUST00000034512.5|Oaf|ENSMUSG00000032014.5|OAF homolog (Drosophila)
mm10_v2_chr11_-_61855026_61855073	2.5626	AAGGCAC	ENSMUST00000004920.3|Ulk2|ENSMUSG00000004798.8|unc-51 like kinase 2
mm10_v2_chr8_+_123653903_123653929	2.54916	AAGGCAC	ENSMUST00000045487.3|Rhou|ENSMUSG00000039960.5|ras homolog gene family, member U
mm10_v2_chr12_-_69724830_69724885	2.548	AAGGCAC	ENSMUST00000021370.8|L2hgdh|ENSMUSG00000020988.8|L-2-hydroxyglutarate dehydrogenase
mm10_v2_chr4_+_139622842_139622902	2.53425	AAGGCAC	ENSMUST00000039818.9|Aldh4a1|ENSMUSG00000028737.9|aldehyde dehydrogenase 4 family, member A1
mm10_v2_chr18_-_38211957_38212053	2.52555	AAGGCAC	ENSMUST00000159405.1|Pcdh1|ENSMUSG00000051375.9|protocadherin 1 	ENSMUST00000160721.1|Pcdh1|ENSMUSG00000051375.9|protocadherin 1
mm10_v2_chr5_-_25100624_25100657	2.5159	AAGGCAC	ENSMUST00000030784.7|Prkag2|ENSMUSG00000028944.8|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
mm10_v2_chr14_+_17660956_17660963	2.50216	AAGGCAC	ENSMUST00000022303.7|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta 	ENSMUST00000091471.4|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta
mm10_v2_chr18_-_7004717_7004779	2.47157	AAGGCAC	ENSMUST00000079788.4|Mkx|ENSMUSG00000061013.4|mohawk homeobox
mm10_v2_chr16_+_20097554_20097596	2.46912	AAGGCAC	ENSMUST00000023509.3|Klhl24|ENSMUSG00000062901.2|kelch-like 24
mm10_v2_chr12_-_75735729_75735736	2.44958	AAGGCAC	ENSMUST00000021450.4|Sgpp1|ENSMUSG00000021054.5|sphingosine-1-phosphate phosphatase 1
mm10_v2_chr6_-_59426279_59426345	2.42793	AAGGCAC	ENSMUST00000051065.4|Gprin3|ENSMUSG00000045441.4|GPRIN family member 3
mm10_v2_chrX_+_129749830_129749976	2.42065	AAGGCAC	ENSMUST00000113320.2|Diap2|ENSMUSG00000034480.12|diaphanous homolog 2 (Drosophila)
mm10_v2_chr18_+_84851338_84851429	2.41008	AAGGCAC	ENSMUST00000160180.1|Cyb5|ENSMUSG00000024646.7|cytochrome b-5
mm10_v2_chr6_+_108828633_108828721	2.36403	AAGGCAC	ENSMUST00000089162.3|Edem1|ENSMUSG00000030104.7|ER degradation enhancer, mannosidase alpha-like 1
mm10_v2_chr18_-_66002612_66002637	2.36108	AAGGCAC	ENSMUST00000120461.1|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1 	ENSMUST00000048260.7|Lman1|ENSMUSG00000041891.9|lectin, mannose-binding, 1
mm10_v2_chr13_-_64274879_64274947	2.33949	AAGGCAC	ENSMUST00000109770.1|Cdc14b|ENSMUSG00000033102.8|CDC14 cell division cycle 14B
mm10_v2_chr3_-_85746266_85746266	2.30661	AAGGCAC	ENSMUST00000118408.1|Fam160a1|ENSMUSG00000051000.11|family with sequence similarity 160, member A1
mm10_v2_chr5_-_34187670_34187749	2.26041	AAGGCAC	ENSMUST00000042701.6|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4 	ENSMUST00000119171.1|Mxd4|ENSMUSG00000037235.7|Max dimerization protein 4
mm10_v2_chr9_+_44066993_44067024	2.22944	AAGGCAC	ENSMUST00000034508.7|Usp2|ENSMUSG00000032010.8|ubiquitin specific peptidase 2
mm10_v2_chr3_+_104864459_104864512	2.224	AAGGCAC	ENSMUST00000059271.6|St7l|ENSMUSG00000045576.10|suppression of tumorigenicity 7-like 	ENSMUST00000106769.1|St7l|ENSMUSG00000045576.10|suppression of tumorigenicity 7-like
mm10_v2_chrX_+_142226765_142226806	2.21698	AAGGCAC	ENSMUST00000112916.2|Nxt2|ENSMUSG00000042271.7|nuclear transport factor 2-like export factor 2
mm10_v2_chr18_+_64340225_64340364	2.20735	AAGGCAC	ENSMUST00000175965.2|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2 	ENSMUST00000115145.3|Onecut2|ENSMUSG00000045991.12|one cut domain, family member 2
mm10_v2_chr17_+_64600702_64600739	2.20276	AAGGCAC	ENSMUST00000086723.3|Man2a1|ENSMUSG00000024085.7|mannosidase 2, alpha 1
mm10_v2_chr9_+_74861888_74861921	2.19914	AAGGCAC	ENSMUST00000056006.9|Onecut1|ENSMUSG00000043013.9|one cut domain, family member 1
mm10_v2_chr4_-_121098190_121098250	2.18806	AAGGCAC	ENSMUST00000058754.2|Zmpste24|ENSMUSG00000043207.4|zinc metallopeptidase, STE24
mm10_v2_chr18_+_9212856_9212856	2.18783	AAGGCAC	ENSMUST00000041080.5|Fzd8|ENSMUSG00000036904.5|frizzled homolog 8 (Drosophila)
mm10_v2_chr6_-_148831448_148831494	2.17249	AAGGCAC	ENSMUST00000048418.7|Ipo8|ENSMUSG00000040029.8|importin 8
mm10_v2_chr12_-_35534973_35535058	2.1529	AAGGCAC	ENSMUST00000116436.2|Ahr|ENSMUSG00000019256.11|aryl-hydrocarbon receptor
mm10_v2_chrX_-_52165252_52165280	2.15159	AAGGCAC	ENSMUST00000033450.2|Gpc4|ENSMUSG00000031119.4|glypican 4
mm10_v2_chr1_-_161251153_161251219	2.1378	AAGGCAC	ENSMUST00000051925.4|Prdx6|ENSMUSG00000026701.9|peroxiredoxin 6 	ENSMUST00000071718.5|Prdx6|ENSMUSG00000026701.9|peroxiredoxin 6
mm10_v2_chr14_-_25769033_25769083	2.13617	AAGGCAC	ENSMUST00000069180.7|Zcchc24|ENSMUSG00000055538.7|zinc finger, CCHC domain containing 24
mm10_v2_chr11_+_75193783_75193864	2.12481	AAGGCAC	ENSMUST00000102514.3|Rtn4rl1|ENSMUSG00000045287.6|reticulon 4 receptor-like 1
mm10_v2_chr2_-_66784903_66784920	2.1222	AAGGCAC	ENSMUST00000042792.6|Scn7a|ENSMUSG00000034810.7|sodium channel, voltage-gated, type VII, alpha
mm10_v2_chr11_-_73324616_73324641	2.11735	AAGGCAC	ENSMUST00000021119.2|Aspa|ENSMUSG00000020774.3|aspartoacylase
mm10_v2_chr4_+_49521176_49521296	2.11104	AAGGCAC	ENSMUST00000042964.6|Zfp189|ENSMUSG00000039634.6|zinc finger protein 189 	ENSMUST00000107696.1|Zfp189|ENSMUSG00000039634.6|zinc finger protein 189
mm10_v2_chr19_-_34879452_34879465	2.10449	AAGGCAC	ENSMUST00000036584.5|Pank1|ENSMUSG00000033610.9|pantothenate kinase 1
mm10_v2_chr6_-_119417479_119417530	2.10133	AAGGCAC	ENSMUST00000032272.6|Adipor2|ENSMUSG00000030168.7|adiponectin receptor 2
mm10_v2_chr5_-_113163288_113163351	2.07272	AAGGCAC	ENSMUST00000050125.8|2900026A02Rik|ENSMUSG00000051339.8|RIKEN cDNA 2900026A02 gene
mm10_v2_chr4_+_102254993_102255003	2.07076	AAGGCAC	ENSMUST00000106908.2|Pde4b|ENSMUSG00000028525.10|phosphodiesterase 4B, cAMP specific
mm10_v2_chr10_+_99108135_99108206	2.05999	AAGGCAC	ENSMUST00000161240.2|Galnt4|ENSMUSG00000090035.2|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4
mm10_v2_chr15_+_25622525_25622558	2.0423	AAGGCAC	ENSMUST00000110457.1|Myo10|ENSMUSG00000022272.11|myosin X 	ENSMUST00000137601.1|Myo10|ENSMUSG00000022272.11|myosin X
mm10_v2_chr10_-_59616667_59616695	2.0284	AAGGCAC	ENSMUST00000020312.6|Mcu|ENSMUSG00000009647.7|mitochondrial calcium uniporter
mm10_v2_chrX_+_98149666_98149721	2.02436	AAGGCAC	ENSMUST00000052837.7|Ar|ENSMUSG00000046532.7|androgen receptor
mm10_v2_chr2_+_155381808_155381884	2.01849	AAGGCAC	ENSMUST00000043237.7|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2 	ENSMUST00000174685.1|Trp53inp2|ENSMUSG00000038375.9|transformation related protein 53 inducible nuclear protein 2
mm10_v2_chr8_-_38661508_38661545	2.01807	AAGGCAC	ENSMUST00000118896.1|Sgcz|ENSMUSG00000039539.7|sarcoglycan zeta
mm10_v2_chr18_-_60713389_60713389	2.01762	AAGGCAC	ENSMUST00000169273.1|Ndst1|ENSMUSG00000054008.8|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
mm10_v2_chr2_+_15055274_15055379	2.0168	AAGGCAC	ENSMUST00000069870.3|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chr1_-_136960427_136960494	2.01542	AAGGCAC	ENSMUST00000027649.7|Nr5a2|ENSMUSG00000026398.8|nuclear receptor subfamily 5, group A, member 2
mm10_v2_chr11_+_57801575_57801649	1.9778	AAGGCAC	ENSMUST00000020826.5|Sap30l|ENSMUSG00000020519.5|SAP30-like
mm10_v2_chr10_-_68278713_68278735	1.9605	AAGGCAC	ENSMUST00000020106.7|Arid5b|ENSMUSG00000019947.9|AT rich interactive domain 5B (MRF1-like)
mm10_v2_chr1_-_191397026_191397041	1.9573	AAGGCAC	ENSMUST00000067976.3|Ppp2r5a|ENSMUSG00000026626.6|protein phosphatase 2, regulatory subunit B (B56), alpha isoform
mm10_v2_chr1_-_189343704_189343832	1.92055	AAGGCAC	ENSMUST00000180044.1|Kcnk2|ENSMUSG00000037624.9|potassium channel, subfamily K, member 2 	ENSMUST00000110920.1|Kcnk2|ENSMUSG00000037624.9|potassium channel, subfamily K, member 2
mm10_v2_chr16_+_42907563_42907684	1.91435	AAGGCAC	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr3_-_101604580_101604629	1.90506	AAGGCAC	ENSMUST00000036493.6|Atp1a1|ENSMUSG00000033161.9|ATPase, Na+/K+ transporting, alpha 1 polypeptide
mm10_v2_chr4_-_114987220_114987256	1.89909	AAGGCAC	ENSMUST00000030491.8|Cmpk1|ENSMUSG00000028719.8|cytidine monophosphate (UMP-CMP) kinase 1
mm10_v2_chr2_+_83812567_83812643	1.89888	AAGGCAC	ENSMUST00000051454.3|Fam171b|ENSMUSG00000048388.3|family with sequence similarity 171, member B
mm10_v2_chrX_-_136868537_136868755	1.89313	AAGGCAC	ENSMUST00000058814.6|Rab9b|ENSMUSG00000043463.6|RAB9B, member RAS oncogene family
mm10_v2_chr17_-_65951156_65951199	1.89195	AAGGCAC	ENSMUST00000024906.4|Twsg1|ENSMUSG00000024098.5|twisted gastrulation homolog 1 (Drosophila)
mm10_v2_chr17_+_8165501_8165540	1.87769	AAGGCAC	ENSMUST00000097419.3|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner 	ENSMUST00000024636.8|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner
mm10_v2_chr3_-_116712644_116712655	1.875	AAGGCAC	ENSMUST00000029569.2|Slc35a3|ENSMUSG00000027957.7|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
mm10_v2_chr19_+_36554661_36554688	1.85871	AAGGCAC	ENSMUST00000169036.2|Hectd2|ENSMUSG00000041180.7|HECT domain containing 2 	ENSMUST00000047247.5|Hectd2|ENSMUSG00000041180.7|HECT domain containing 2
mm10_v2_chr5_-_147076482_147076586	1.84997	AAGGCAC	ENSMUST00000016664.7|Lnx2|ENSMUSG00000016520.7|ligand of numb-protein X 2
mm10_v2_chrX_-_36645359_36645414	1.84506	AAGGCAC	ENSMUST00000051906.6|Akap17b|ENSMUSG00000059708.6|A kinase (PRKA) anchor protein 17B
mm10_v2_chr3_-_131344892_131344940	1.84221	AAGGCAC	ENSMUST00000090246.4|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2 	ENSMUST00000126569.1|Sgms2|ENSMUSG00000050931.6|sphingomyelin synthase 2
mm10_v2_chr2_+_122234749_122234822	1.82802	AAGGCAC	ENSMUST00000110551.3|Sord|ENSMUSG00000027227.7|sorbitol dehydrogenase
mm10_v2_chr18_+_38418946_38418985	1.80956	AAGGCAC	ENSMUST00000025293.3|Ndfip1|ENSMUSG00000024425.3|Nedd4 family interacting protein 1
mm10_v2_chr1_-_132139666_132139692	1.80382	AAGGCAC	ENSMUST00000027697.5|Cdk18|ENSMUSG00000026437.5|cyclin-dependent kinase 18
mm10_v2_chr5_-_76304474_76304548	1.79217	AAGGCAC	ENSMUST00000075159.1|Clock|ENSMUSG00000029238.8|circadian locomotor output cycles kaput
mm10_v2_chr16_+_78301458_78301496	1.78703	AAGGCAC	ENSMUST00000023572.7|Cxadr|ENSMUSG00000022865.7|coxsackie virus and adenovirus receptor
mm10_v2_chr4_+_11156411_11156453	1.78	AAGGCAC	ENSMUST00000029865.3|Trp53inp1|ENSMUSG00000028211.5|transformation related protein 53 inducible nuclear protein 1
mm10_v2_chr7_+_64287665_64287676	1.76912	AAGGCAC	ENSMUST00000032736.4|Mtmr10|ENSMUSG00000030522.8|myotubularin related protein 10
mm10_v2_chr7_+_35119285_35119301	1.76905	AAGGCAC	ENSMUST00000042985.9|Cebpa|ENSMUSG00000034957.9|CCAAT/enhancer binding protein (C/EBP), alpha
mm10_v2_chr10_+_20148920_20149014	1.76889	AAGGCAC	ENSMUST00000116259.3|Map7|ENSMUSG00000019996.10|microtubule-associated protein 7
mm10_v2_chr2_-_32694120_32694185	1.7664	AAGGCAC	ENSMUST00000028148.4|Fpgs|ENSMUSG00000009566.6|folylpolyglutamyl synthetase
mm10_v2_chr3_+_41555723_41555745	1.76121	AAGGCAC	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr17_-_44105774_44105845	1.75483	AAGGCAC	ENSMUST00000024757.7|Enpp4|ENSMUSG00000023961.10|ectonucleotide pyrophosphatase/phosphodiesterase 4
mm10_v2_chrX_+_139610612_139610632	1.74718	AAGGCAC	ENSMUST00000113026.1|Rnf128|ENSMUSG00000031438.5|ring finger protein 128
mm10_v2_chr9_+_14276301_14276347	1.74612	AAGGCAC	ENSMUST00000034507.7|Sesn3|ENSMUSG00000032009.7|sestrin 3
mm10_v2_chr2_+_134786154_134786170	1.74268	AAGGCAC	ENSMUST00000110116.1|Plcb1|ENSMUSG00000051177.10|phospholipase C, beta 1
mm10_v2_chr10_-_81427114_81427187	1.73787	AAGGCAC	ENSMUST00000078185.7|Nfic|ENSMUSG00000055053.11|nuclear factor I/C 	ENSMUST00000020461.8|Nfic|ENSMUSG00000055053.11|nuclear factor I/C 	ENSMUST00000105321.3|Nfic|ENSMUSG00000055053.11|nuclear factor I/C
mm10_v2_chr2_-_26092149_26092177	1.73397	AAGGCAC	ENSMUST00000114159.2|Nacc2|ENSMUSG00000026932.8|nucleus accumbens associated 2, BEN and BTB (POZ) domain containing
mm10_v2_chr3_-_89387132_89387189	1.73247	AAGGCAC	ENSMUST00000107433.1|Zbtb7b|ENSMUSG00000028042.9|zinc finger and BTB domain containing 7B
mm10_v2_chr19_+_25236959_25236982	1.73119	AAGGCAC	ENSMUST00000049400.8|Kank1|ENSMUSG00000032702.10|KN motif and ankyrin repeat domains 1
mm10_v2_chr3_-_69127098_69127113	1.73114	AAGGCAC	ENSMUST00000029353.2|Kpna4|ENSMUSG00000027782.4|karyopherin (importin) alpha 4
mm10_v2_chr8_-_104395765_104395858	1.71183	AAGGCAC	ENSMUST00000179802.1|Cmtm4|ENSMUSG00000096188.1|CKLF-like MARVEL transmembrane domain containing 4
mm10_v2_chr10_-_77902467_77902536	1.70918	AAGGCAC	ENSMUST00000057608.4|Lrrc3|ENSMUSG00000051652.4|leucine rich repeat containing 3
mm10_v2_chr1_-_106796687_106796728	1.69555	AAGGCAC	ENSMUST00000094646.5|Vps4b|ENSMUSG00000009907.11|vacuolar protein sorting 4b (yeast)
mm10_v2_chr12_+_32953874_32953891	1.69024	AAGGCAC	ENSMUST00000076698.5|Sypl|ENSMUSG00000020570.8|synaptophysin-like protein
mm10_v2_chr6_-_86397098_86397150	1.68345	AAGGCAC	ENSMUST00000153723.1|Pcyox1|ENSMUSG00000029998.8|prenylcysteine oxidase 1 	ENSMUST00000032065.8|Pcyox1|ENSMUSG00000029998.8|prenylcysteine oxidase 1
mm10_v2_chr10_-_7780866_7780923	1.68329	AAGGCAC	ENSMUST00000124838.1|Ginm1|ENSMUSG00000040006.7|glycoprotein integral membrane 1 	ENSMUST00000039763.7|Ginm1|ENSMUSG00000040006.7|glycoprotein integral membrane 1
mm10_v2_chr1_-_190170671_190170744	1.67989	AAGGCAC	ENSMUST00000175916.1|Prox1|ENSMUSG00000010175.7|prospero-related homeobox 1
mm10_v2_chr6_-_126645784_126645801	1.6788	AAGGCAC	ENSMUST00000055168.3|Kcna1|ENSMUSG00000047976.3|potassium voltage-gated channel, shaker-related subfamily, member 1
mm10_v2_chr1_+_156035392_156035431	1.67555	AAGGCAC	ENSMUST00000111757.3|Tor1aip2|ENSMUSG00000050565.10|torsin A interacting protein 2
mm10_v2_chr18_-_77565050_77565162	1.67531	AAGGCAC	ENSMUST00000182153.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182146.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000026494.7|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182024.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165
mm10_v2_chr11_+_35769462_35769484	1.66812	AAGGCAC	ENSMUST00000018990.7|Pank3|ENSMUSG00000018846.8|pantothenate kinase 3
mm10_v2_chr5_+_30232581_30232680	1.66659	AAGGCAC	ENSMUST00000145167.1|Ept1|ENSMUSG00000075703.9|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
mm10_v2_chr6_+_56714891_56714951	1.65863	AAGGCAC	ENSMUST00000031805.8|Avl9|ENSMUSG00000029787.8|AVL9 homolog (S. cerevisiase)
mm10_v2_chr4_+_97777606_97777632	1.63198	AAGGCAC	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr11_-_53891638_53891660	1.62758	AAGGCAC	ENSMUST00000019044.7|Slc22a5|ENSMUSG00000018900.7|solute carrier family 22 (organic cation transporter), member 5
mm10_v2_chr5_+_30588078_30588171	1.62708	AAGGCAC	ENSMUST00000066295.2|Kcnk3|ENSMUSG00000049265.6|potassium channel, subfamily K, member 3
mm10_v2_chr2_+_79635352_79635410	1.62192	AAGGCAC	ENSMUST00000111785.2|Ssfa2|ENSMUSG00000027007.10|sperm specific antigen 2
mm10_v2_chr16_+_84774123_84774174	1.62141	AAGGCAC	ENSMUST00000114195.1|Jam2|ENSMUSG00000053062.9|junction adhesion molecule 2
mm10_v2_chrX_+_103356464_103356488	1.6188	AAGGCAC	ENSMUST00000116547.2|Chic1|ENSMUSG00000031327.10|cysteine-rich hydrophobic domain 1
mm10_v2_chr6_-_113531575_113531667	1.61559	AAGGCAC	ENSMUST00000032425.5|Emc3|ENSMUSG00000030286.5|ER membrane protein complex subunit 3
mm10_v2_chr16_-_65562686_65562769	1.6038	AAGGCAC	ENSMUST00000004965.6|Chmp2b|ENSMUSG00000004843.6|charged multivesicular body protein 2B
mm10_v2_chr12_-_86884808_86884842	1.59265	AAGGCAC	ENSMUST00000038422.6|Irf2bpl|ENSMUSG00000034168.6|interferon regulatory factor 2 binding protein-like
mm10_v2_chr18_+_36281069_36281151	1.57951	AAGGCAC	ENSMUST00000051301.3|Pura|ENSMUSG00000043991.3|purine rich element binding protein A
mm10_v2_chr18_+_84088077_84088178	1.57703	AAGGCAC	ENSMUST00000060223.2|Zadh2|ENSMUSG00000049090.2|zinc binding alcohol dehydrogenase, domain containing 2
mm10_v2_chr16_+_21891969_21891969	1.57485	AAGGCAC	ENSMUST00000042065.6|Map3k13|ENSMUSG00000033618.6|mitogen-activated protein kinase kinase kinase 13
mm10_v2_chr10_-_61147659_61147703	1.5691	AAGGCAC	ENSMUST00000092498.5|Sgpl1|ENSMUSG00000020097.8|sphingosine phosphate lyase 1 	ENSMUST00000137833.1|Sgpl1|ENSMUSG00000020097.8|sphingosine phosphate lyase 1 	ENSMUST00000155919.1|Sgpl1|ENSMUSG00000020097.8|sphingosine phosphate lyase 1
mm10_v2_chr7_+_49910112_49910146	1.56672	AAGGCAC	ENSMUST00000056442.5|Slc6a5|ENSMUSG00000039728.8|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm10_v2_chr19_+_3323301_3323339	1.56248	AAGGCAC	ENSMUST00000025835.4|Cpt1a|ENSMUSG00000024900.4|carnitine palmitoyltransferase 1a, liver
mm10_v2_chr16_+_38089001_38089064	1.56204	AAGGCAC	ENSMUST00000023507.6|Gsk3b|ENSMUSG00000022812.7|glycogen synthase kinase 3 beta
mm10_v2_chr2_-_154408078_154408116	1.561	AAGGCAC	ENSMUST00000028991.6|Snta1|ENSMUSG00000027488.6|syntrophin, acidic 1 	ENSMUST00000109728.1|Snta1|ENSMUSG00000027488.6|syntrophin, acidic 1
mm10_v2_chr5_-_98030727_98030765	1.55242	AAGGCAC	ENSMUST00000031281.9|Antxr2|ENSMUSG00000029338.9|anthrax toxin receptor 2
mm10_v2_chr13_-_60177357_60177373	1.54608	AAGGCAC	ENSMUST00000065086.4|Gas1|ENSMUSG00000052957.7|growth arrest specific 1
mm10_v2_chr9_+_120303896_120303960	1.53811	AAGGCAC	ENSMUST00000048121.6|Myrip|ENSMUSG00000041794.6|myosin VIIA and Rab interacting protein
mm10_v2_chr15_-_89171120_89171120	1.53307	AAGGCAC	ENSMUST00000109331.1|Plxnb2|ENSMUSG00000036606.10|plexin B2
mm10_v2_chr6_+_97807014_97807067	1.51996	AAGGCAC	ENSMUST00000043637.7|Mitf|ENSMUSG00000035158.9|microphthalmia-associated transcription factor
mm10_v2_chr1_-_165194310_165194433	1.51224	AAGGCAC	ENSMUST00000043338.4|Sft2d2|ENSMUSG00000040848.6|SFT2 domain containing 2
mm10_v2_chr9_+_44499126_44499159	1.5119	AAGGCAC	ENSMUST00000074989.5|Bcl9l|ENSMUSG00000063382.5|B cell CLL/lymphoma 9-like
mm10_v2_chr10_-_53379816_53379858	1.51159	AAGGCAC	ENSMUST00000095691.5|Cep85l|ENSMUSG00000038594.8|centrosomal protein 85-like
mm10_v2_chr15_-_53902472_53902530	1.50305	AAGGCAC	ENSMUST00000078673.6|Samd12|ENSMUSG00000058656.6|sterile alpha motif domain containing 12
mm10_v2_chr7_-_99182681_99182728	1.50069	AAGGCAC	ENSMUST00000033001.4|Dgat2|ENSMUSG00000030747.4|diacylglycerol O-acyltransferase 2
mm10_v2_chr2_+_23156369_23156527	1.4959	AAGGCAC	ENSMUST00000028117.3|Yme1l1|ENSMUSG00000026775.3|YME1-like 1 (S. cerevisiae)
mm10_v2_chr19_-_29648355_29648425	1.49495	AAGGCAC	ENSMUST00000159692.1|Ermp1|ENSMUSG00000046324.6|endoplasmic reticulum metallopeptidase 1
mm10_v2_chr4_+_106561027_106561038	1.49301	AAGGCAC	ENSMUST00000047973.3|Dhcr24|ENSMUSG00000034926.3|24-dehydrocholesterol reductase
mm10_v2_chr5_-_107875035_107875107	1.49135	AAGGCAC	ENSMUST00000138111.1|Evi5|ENSMUSG00000011831.10|ecotropic viral integration site 5 	ENSMUST00000112642.1|Evi5|ENSMUSG00000011831.10|ecotropic viral integration site 5
mm10_v2_chr10_-_78464853_78464944	1.48304	AAGGCAC	ENSMUST00000105385.1|Pdxk|ENSMUSG00000032788.8|pyridoxal (pyridoxine, vitamin B6) kinase
mm10_v2_chr2_+_27677201_27677229	1.47727	AAGGCAC	ENSMUST00000077257.5|Rxra|ENSMUSG00000015846.8|retinoid X receptor alpha
mm10_v2_chr4_-_149307506_149307703	1.4718	AAGGCAC	ENSMUST00000055647.8|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B 	ENSMUST00000030806.5|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B 	ENSMUST00000060537.6|Kif1b|ENSMUSG00000063077.8|kinesin family member 1B
mm10_v2_chr19_-_55099417_55099492	1.46892	AAGGCAC	ENSMUST00000061856.5|Gpam|ENSMUSG00000024978.10|glycerol-3-phosphate acyltransferase, mitochondrial
mm10_v2_chr2_-_52676571_52676588	1.46644	AAGGCAC	ENSMUST00000178799.1|Cacnb4|ENSMUSG00000017412.9|calcium channel, voltage-dependent, beta 4 subunit
mm10_v2_chr16_+_24393350_24393428	1.46111	AAGGCAC	ENSMUST00000038053.6|Lpp|ENSMUSG00000033306.8|LIM domain containing preferred translocation partner in lipoma
mm10_v2_chr13_+_38345716_38345716	1.45739	AAGGCAC	ENSMUST00000171970.1|Bmp6|ENSMUSG00000039004.5|bone morphogenetic protein 6
mm10_v2_chr18_+_31759817_31759851	1.45502	AAGGCAC	ENSMUST00000115808.2|Ammecr1l|ENSMUSG00000041915.8|AMME chromosomal region gene 1-like
mm10_v2_chr9_-_78587968_78588047	1.45449	AAGGCAC	ENSMUST00000117645.1|Slc17a5|ENSMUSG00000049624.7|solute carrier family 17 (anion/sugar transporter), member 5 	ENSMUST00000119213.1|Slc17a5|ENSMUSG00000049624.7|solute carrier family 17 (anion/sugar transporter), member 5 	ENSMUST00000052441.5|Slc17a5|ENSMUSG00000049624.7|solute carrier family 17 (anion/sugar transporter), member 5
mm10_v2_chr1_+_132007606_132007634	1.4514	AAGGCAC	ENSMUST00000086556.5|Elk4|ENSMUSG00000026436.9|ELK4, member of ETS oncogene family
mm10_v2_chr18_+_32163073_32163115	1.44825	AAGGCAC	ENSMUST00000096575.3|Map3k2|ENSMUSG00000024383.8|mitogen-activated protein kinase kinase kinase 2
mm10_v2_chr11_+_88068242_88068289	1.44638	AAGGCAC	ENSMUST00000018521.4|Vezf1|ENSMUSG00000018377.4|vascular endothelial zinc finger 1
mm10_v2_chr2_-_132815978_132816054	1.44467	AAGGCAC	ENSMUST00000039554.6|Trmt6|ENSMUSG00000037376.8|tRNA methyltransferase 6
mm10_v2_chr10_+_61695503_61695576	1.44417	AAGGCAC	ENSMUST00000020284.4|Tysnd1|ENSMUSG00000020087.4|trypsin domain containing 1
mm10_v2_chr5_+_88583527_88583590	1.43965	AAGGCAC	ENSMUST00000031229.6|Rufy3|ENSMUSG00000029291.7|RUN and FYVE domain containing 3
mm10_v2_chr10_-_8886033_8886076	1.4366	AAGGCAC	ENSMUST00000015449.5|Sash1|ENSMUSG00000015305.5|SAM and SH3 domain containing 1
mm10_v2_chr10_+_60106198_60106221	1.43597	AAGGCAC	ENSMUST00000121820.2|Spock2|ENSMUSG00000058297.10|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm10_v2_chr19_-_47464406_47464450	1.43094	AAGGCAC	ENSMUST00000111800.2|Sh3pxd2a|ENSMUSG00000053617.5|SH3 and PX domains 2A 	ENSMUST00000081619.2|Sh3pxd2a|ENSMUSG00000053617.5|SH3 and PX domains 2A
mm10_v2_chr8_-_84893887_84893921	1.42663	AAGGCAC	ENSMUST00000003907.7|Gcdh|ENSMUSG00000003809.8|glutaryl-Coenzyme A dehydrogenase 	ENSMUST00000182458.1|Gcdh|ENSMUSG00000003809.8|glutaryl-Coenzyme A dehydrogenase 	ENSMUST00000109745.1|Gcdh|ENSMUSG00000003809.8|glutaryl-Coenzyme A dehydrogenase 	ENSMUST00000142748.1|Gcdh|ENSMUSG00000003809.8|glutaryl-Coenzyme A dehydrogenase
mm10_v2_chr16_-_17132377_17132388	1.41548	AAGGCAC	ENSMUST00000023453.7|Sdf2l1|ENSMUSG00000022769.7|stromal cell-derived factor 2-like 1
mm10_v2_chr15_+_34082664_34082734	1.40101	AAGGCAC	ENSMUST00000022865.9|Mtdh|ENSMUSG00000022255.9|metadherin
mm10_v2_chr9_-_44965519_44965600	1.39136	AAGGCAC	ENSMUST00000125642.1|Ube4a|ENSMUSG00000059890.9|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae) 	ENSMUST00000117506.1|Ube4a|ENSMUSG00000059890.9|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae) 	ENSMUST00000117549.1|Ube4a|ENSMUSG00000059890.9|ubiquitination factor E4A, UFD2 homolog (S. cerevisiae)
mm10_v2_chr10_+_108332173_108332189	1.39047	AAGGCAC	ENSMUST00000095313.3|Pawr|ENSMUSG00000035873.7|PRKC, apoptosis, WT1, regulator
mm10_v2_chr19_+_16435616_16435667	1.38684	AAGGCAC	ENSMUST00000025602.2|Gna14|ENSMUSG00000024697.3|guanine nucleotide binding protein, alpha 14
mm10_v2_chr7_+_89404356_89404367	1.3776	AAGGCAC	ENSMUST00000058755.3|Fzd4|ENSMUSG00000049791.3|frizzled homolog 4 (Drosophila)
mm10_v2_chr8_+_128685654_128685782	1.37723	AAGGCAC	ENSMUST00000090006.5|Itgb1|ENSMUSG00000025809.9|integrin beta 1 (fibronectin receptor beta)
mm10_v2_chr8_+_111094630_111094641	1.37639	AAGGCAC	ENSMUST00000135302.1|Pdpr|ENSMUSG00000033624.4|pyruvate dehydrogenase phosphatase regulatory subunit 	ENSMUST00000039333.3|Pdpr|ENSMUSG00000033624.4|pyruvate dehydrogenase phosphatase regulatory subunit
mm10_v2_chr1_+_138963709_138963808	1.37293	AAGGCAC	ENSMUST00000168527.1|Dennd1b|ENSMUSG00000056268.9|DENN/MADD domain containing 1B
mm10_v2_chr13_-_17944151_17944239	1.37081	AAGGCAC	ENSMUST00000009003.7|Rala|ENSMUSG00000008859.7|v-ral simian leukemia viral oncogene homolog A (ras related)
mm10_v2_chr18_-_84086379_84086404	1.36889	AAGGCAC	ENSMUST00000060303.8|Tshz1|ENSMUSG00000046982.9|teashirt zinc finger family member 1
mm10_v2_chr2_+_57237651_57237729	1.36635	AAGGCAC	ENSMUST00000169687.1|Gpd2|ENSMUSG00000026827.6|glycerol phosphate dehydrogenase 2, mitochondrial
mm10_v2_chrX_-_13846508_13846591	1.35459	AAGGCAC	ENSMUST00000115436.2|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000033321.4|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENSMUST00000115438.3|Cask|ENSMUSG00000031012.11|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
mm10_v2_chr13_+_60601921_60602039	1.3469	AAGGCAC	ENSMUST00000077453.5|Dapk1|ENSMUSG00000021559.7|death associated protein kinase 1
mm10_v2_chr14_+_26579535_26579612	1.33663	AAGGCAC	ENSMUST00000037585.7|Dennd6a|ENSMUSG00000040818.7|DENN/MADD domain containing 6A
mm10_v2_chr5_-_88676135_88676186	1.33593	AAGGCAC	ENSMUST00000078945.5|Grsf1|ENSMUSG00000044221.8|G-rich RNA sequence binding factor 1
mm10_v2_chrX_-_106011874_106011906	1.33518	AAGGCAC	ENSMUST00000033583.7|Magt1|ENSMUSG00000031232.10|magnesium transporter 1 	ENSMUST00000151689.1|Magt1|ENSMUSG00000031232.10|magnesium transporter 1
mm10_v2_chr2_+_91202885_91202934	1.32561	AAGGCAC	ENSMUST00000150403.1|Acp2|ENSMUSG00000002103.9|acid phosphatase 2, lysosomal 	ENSMUST00000002172.7|Acp2|ENSMUSG00000002103.9|acid phosphatase 2, lysosomal 	ENSMUST00000155418.1|Acp2|ENSMUSG00000002103.9|acid phosphatase 2, lysosomal
mm10_v2_chr8_+_61224162_61224174	1.32193	AAGGCAC	ENSMUST00000034060.5|Sh3rf1|ENSMUSG00000031642.8|SH3 domain containing ring finger 1
mm10_v2_chr11_-_74897052_74897094	1.30974	AAGGCAC	ENSMUST00000057631.5|Sgsm2|ENSMUSG00000038351.8|small G protein signaling modulator 2 	ENSMUST00000081799.5|Sgsm2|ENSMUSG00000038351.8|small G protein signaling modulator 2
mm10_v2_chr10_-_121476248_121476275	1.30863	AAGGCAC	ENSMUST00000026902.7|Rassf3|ENSMUSG00000025795.7|Ras association (RalGDS/AF-6) domain family member 3
mm10_v2_chr6_-_35539765_35539888	1.30504	AAGGCAC	ENSMUST00000031866.5|Mtpn|ENSMUSG00000029840.5|myotrophin
mm10_v2_chr11_-_5542177_5542219	1.30503	AAGGCAC	ENSMUST00000020776.4|Ccdc117|ENSMUSG00000020482.4|coiled-coil domain containing 117
mm10_v2_chr2_+_127270208_127270271	1.30366	AAGGCAC	ENSMUST00000110375.2|Stard7|ENSMUSG00000027367.10|START domain containing 7
mm10_v2_chr13_+_9093893_9093927	1.30257	AAGGCAC	ENSMUST00000091829.2|Larp4b|ENSMUSG00000033499.7|La ribonucleoprotein domain family, member 4B
mm10_v2_chr17_-_80480435_80480462	1.29601	AAGGCAC	ENSMUST00000068714.5|Sos1|ENSMUSG00000024241.6|son of sevenless homolog 1 (Drosophila)
mm10_v2_chr10_-_59221757_59221847	1.28422	AAGGCAC	ENSMUST00000165971.1|Sept10|ENSMUSG00000019917.9|septin 10
mm10_v2_chr18_-_37935429_37935476	1.28197	AAGGCAC	ENSMUST00000115634.1|Diap1|ENSMUSG00000024456.10|diaphanous homolog 1 (Drosophila)
mm10_v2_chr11_+_78037931_78037955	1.27873	AAGGCAC	ENSMUST00000072289.5|Flot2|ENSMUSG00000061981.8|flotillin 2 	ENSMUST00000100784.2|Flot2|ENSMUSG00000061981.8|flotillin 2
mm10_v2_chr11_-_30025915_30026033	1.27858	AAGGCAC	ENSMUST00000058902.5|Eml6|ENSMUSG00000044072.8|echinoderm microtubule associated protein like 6
mm10_v2_chr2_-_160872552_160872622	1.27682	AAGGCAC	ENSMUST00000103111.2|Zhx3|ENSMUSG00000035877.11|zinc fingers and homeoboxes 3
mm10_v2_chr4_-_130275213_130275228	1.27429	AAGGCAC	ENSMUST00000122374.1|Serinc2|ENSMUSG00000023232.11|serine incorporator 2
mm10_v2_chr14_-_61439831_61439947	1.26734	AAGGCAC	ENSMUST00000022496.7|Kpna3|ENSMUSG00000021929.8|karyopherin (importin) alpha 3
mm10_v2_chr16_-_64771146_64771184	1.26157	AAGGCAC	ENSMUST00000076991.6|4930453N24Rik|ENSMUSG00000059920.9|RIKEN cDNA 4930453N24 gene
mm10_v2_chr6_-_86733268_86733394	1.24646	AAGGCAC	ENSMUST00000001185.7|Gmcl1|ENSMUSG00000001157.7|germ cell-less homolog 1 (Drosophila)
mm10_v2_chr1_-_84284548_84284645	1.23841	AAGGCAC	ENSMUST00000177458.1|Pid1|ENSMUSG00000045658.10|phosphotyrosine interaction domain containing 1 	ENSMUST00000168574.2|Pid1|ENSMUSG00000045658.10|phosphotyrosine interaction domain containing 1
mm10_v2_chr5_-_3803081_3803119	1.2367	AAGGCAC	ENSMUST00000043551.6|Ankib1|ENSMUSG00000040351.7|ankyrin repeat and IBR domain containing 1
mm10_v2_chr16_+_37868383_37868481	1.23601	AAGGCAC	ENSMUST00000078717.6|Lrrc58|ENSMUSG00000034158.9|leucine rich repeat containing 58
mm10_v2_chr7_-_52005792_52006018	1.23374	AAGGCAC	ENSMUST00000098414.3|Svip|ENSMUSG00000074093.3|small VCP/p97-interacting protein
mm10_v2_chr7_+_101108768_101108783	1.2317	AAGGCAC	ENSMUST00000098250.3|Fchsd2|ENSMUSG00000030691.8|FCH and double SH3 domains 2 	ENSMUST00000032931.7|Fchsd2|ENSMUSG00000030691.8|FCH and double SH3 domains 2
mm10_v2_chr7_-_116443439_116443462	1.22958	AAGGCAC	ENSMUST00000170430.1|Pik3c2a|ENSMUSG00000030660.8|phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide
mm10_v2_chr3_-_84582476_84582534	1.2256	AAGGCAC	ENSMUST00000107687.2|Arfip1|ENSMUSG00000074513.3|ADP-ribosylation factor interacting protein 1 	ENSMUST00000098990.3|Arfip1|ENSMUSG00000074513.3|ADP-ribosylation factor interacting protein 1
mm10_v2_chr10_-_67096931_67096988	1.22337	AAGGCAC	ENSMUST00000020023.7|Reep3|ENSMUSG00000019873.7|receptor accessory protein 3
mm10_v2_chrX_+_82948861_82948915	1.22231	AAGGCAC	ENSMUST00000114000.1|Dmd|ENSMUSG00000045103.11|dystrophin, muscular dystrophy
mm10_v2_chr2_-_53191214_53191284	1.2133	AAGGCAC	ENSMUST00000076313.6|Prpf40a|ENSMUSG00000061136.7|PRP40 pre-mRNA processing factor 40 homolog A (yeast) 	ENSMUST00000125243.1|Prpf40a|ENSMUSG00000061136.7|PRP40 pre-mRNA processing factor 40 homolog A (yeast)
mm10_v2_chr18_+_4921662_4921726	1.19877	AAGGCAC	ENSMUST00000143254.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr12_+_71309876_71309984	1.19411	AAGGCAC	ENSMUST00000061273.5|Dact1|ENSMUSG00000044548.5|dapper homolog 1, antagonist of beta-catenin (xenopus) 	ENSMUST00000150639.1|Dact1|ENSMUSG00000044548.5|dapper homolog 1, antagonist of beta-catenin (xenopus)
mm10_v2_chr5_-_123749371_123749391	1.19401	AAGGCAC	ENSMUST00000182955.1|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2 	ENSMUST00000182489.1|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2 	ENSMUST00000050827.7|Rsrc2|ENSMUSG00000029422.8|arginine/serine-rich coiled-coil 2
mm10_v2_chr6_+_50110186_50110383	1.19394	AAGGCAC	ENSMUST00000166318.1|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 	ENSMUST00000036236.8|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) 	ENSMUST00000036225.8|Mpp6|ENSMUSG00000038388.8|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
mm10_v2_chr8_-_121652895_121652913	1.1904	AAGGCAC	ENSMUST00000046386.4|Zcchc14|ENSMUSG00000061410.6|zinc finger, CCHC domain containing 14
mm10_v2_chr14_-_55745647_55745690	1.18932	AAGGCAC	ENSMUST00000002403.8|Dhrs1|ENSMUSG00000002332.9|dehydrogenase/reductase (SDR family) member 1
mm10_v2_chr8_-_85299483_85299535	1.1806	AAGGCAC	ENSMUST00000034131.8|Vps35|ENSMUSG00000031696.8|vacuolar protein sorting 35
mm10_v2_chr16_-_45844303_45844381	1.17645	AAGGCAC	ENSMUST00000036355.6|Phldb2|ENSMUSG00000033149.10|pleckstrin homology-like domain, family B, member 2
mm10_v2_chr6_-_134566913_134566995	1.17358	AAGGCAC	ENSMUST00000032322.8|Lrp6|ENSMUSG00000030201.9|low density lipoprotein receptor-related protein 6
mm10_v2_chr7_-_25658726_25658761	1.17174	AAGGCAC	ENSMUST00000071329.6|Bckdha|ENSMUSG00000060376.6|branched chain ketoacid dehydrogenase E1, alpha polypeptide
mm10_v2_chr4_-_11322109_11322146	1.16888	AAGGCAC	ENSMUST00000084892.5|Dpy19l4|ENSMUSG00000045205.10|dpy-19-like 4 (C. elegans) 	ENSMUST00000128024.1|Dpy19l4|ENSMUSG00000045205.10|dpy-19-like 4 (C. elegans)
mm10_v2_chr8_-_95807458_95807471	1.16367	AAGGCAC	ENSMUST00000098473.4|Cnot1|ENSMUSG00000036550.9|CCR4-NOT transcription complex, subunit 1 	ENSMUST00000068452.8|Cnot1|ENSMUSG00000036550.9|CCR4-NOT transcription complex, subunit 1
mm10_v2_chr17_+_80944611_80944644	1.16182	AAGGCAC	ENSMUST00000025092.4|Tmem178|ENSMUSG00000024245.4|transmembrane protein 178
mm10_v2_chr8_+_92961027_92961047	1.16091	AAGGCAC	ENSMUST00000072939.6|Slc6a2|ENSMUSG00000055368.7|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2
mm10_v2_chr4_-_41741301_41741359	1.15993	AAGGCAC	ENSMUST00000071561.6|Sigmar1|ENSMUSG00000036078.10|sigma non-opioid intracellular receptor 1 	ENSMUST00000059354.8|Sigmar1|ENSMUSG00000036078.10|sigma non-opioid intracellular receptor 1
mm10_v2_chr7_+_107595051_107595233	1.15828	AAGGCAC	ENSMUST00000040056.7|Ppfibp2|ENSMUSG00000036528.8|PTPRF interacting protein, binding protein 2 (liprin beta 2)
mm10_v2_chr7_-_98361310_98361328	1.15754	AAGGCAC	ENSMUST00000165257.1|Tsku|ENSMUSG00000049580.6|tsukushi
mm10_v2_chr4_+_89688196_89688198	1.1521	AAGGCAC	ENSMUST00000052478.2|Dmrta1|ENSMUSG00000043753.2|doublesex and mab-3 related transcription factor like family A1
mm10_v2_chrX_-_122397351_122397425	1.14836	AAGGCAC	ENSMUST00000079490.4|Nap1l3|ENSMUSG00000055733.5|nucleosome assembly protein 1-like 3
mm10_v2_chr3_-_41082992_41083046	1.14228	AAGGCAC	ENSMUST00000058578.7|Pgrmc2|ENSMUSG00000049940.7|progesterone receptor membrane component 2
mm10_v2_chr7_-_133123312_133123377	1.13823	AAGGCAC	ENSMUST00000171022.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000163601.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000165534.1|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2 	ENSMUST00000124096.1|Fgfr2|ENSMUSG00000030849.11|fibroblast growth factor receptor 2 	ENSMUST00000033269.8|Ctbp2|ENSMUSG00000030970.10|C-terminal binding protein 2
mm10_v2_chr14_+_120478443_120478510	1.13656	AAGGCAC	ENSMUST00000062117.6|Rap2a|ENSMUSG00000051615.7|RAS related protein 2a
mm10_v2_chr2_-_142901506_142901576	1.1353	AAGGCAC	ENSMUST00000043589.7|Kif16b|ENSMUSG00000038844.8|kinesin family member 16B
mm10_v2_chr9_-_94538075_94538089	1.12886	AAGGCAC	ENSMUST00000113028.1|1190002N15Rik|ENSMUSG00000045414.7|RIKEN cDNA 1190002N15 gene
mm10_v2_chr7_+_51511005_51511046	1.12689	AAGGCAC	ENSMUST00000043944.5|Ano5|ENSMUSG00000055489.7|anoctamin 5
mm10_v2_chr18_+_74442500_74442537	1.12684	AAGGCAC	ENSMUST00000074157.6|Myo5b|ENSMUSG00000025885.12|myosin VB
mm10_v2_chr4_+_57434247_57434368	1.12549	AAGGCAC	ENSMUST00000102905.1|Palm2|ENSMUSG00000090053.3|paralemmin 2
mm10_v2_chr19_-_44107447_44107492	1.12435	AAGGCAC	ENSMUST00000119591.1|Chuk|ENSMUSG00000025199.10|conserved helix-loop-helix ubiquitous kinase 	ENSMUST00000026217.4|Chuk|ENSMUSG00000025199.10|conserved helix-loop-helix ubiquitous kinase
mm10_v2_chr3_-_108146080_108146150	1.12247	AAGGCAC	ENSMUST00000000001.4|Gnai3|ENSMUSG00000000001.4|guanine nucleotide binding protein (G protein), alpha inhibiting 3
mm10_v2_chr13_-_43560174_43560231	1.12086	AAGGCAC	ENSMUST00000021800.4|Mcur1|ENSMUSG00000021371.4|mitochondrial calcium uniporter regulator 1
mm10_v2_chr15_-_81858317_81858328	1.11893	AAGGCAC	ENSMUST00000050467.7|Tob2|ENSMUSG00000048546.7|transducer of ERBB2, 2
mm10_v2_chr18_-_80151467_80151517	1.11689	AAGGCAC	ENSMUST00000066743.9|Adnp2|ENSMUSG00000053950.9|ADNP homeobox 2
mm10_v2_chr12_-_98901478_98901492	1.11612	AAGGCAC	ENSMUST00000065716.6|Eml5|ENSMUSG00000051166.9|echinoderm microtubule associated protein like 5
mm10_v2_chr7_-_38227975_38228000	1.11282	AAGGCAC	ENSMUST00000098513.4|Plekhf1|ENSMUSG00000074170.4|pleckstrin homology domain containing, family F (with FYVE domain) member 1
mm10_v2_chr7_-_105399991_105400054	1.10939	AAGGCAC	ENSMUST00000118726.1|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000074686.7|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000122327.1|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000179474.1|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2 	ENSMUST00000048079.6|Fam160a2|ENSMUSG00000044465.12|family with sequence similarity 160, member A2
mm10_v2_chr9_+_47530173_47530373	1.10612	AAGGCAC	ENSMUST00000114548.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000152459.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000143026.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000085909.2|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000114547.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000034581.3|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1
mm10_v2_chr6_-_13608011_13608100	1.10506	AAGGCAC	ENSMUST00000031554.2|Tmem168|ENSMUSG00000029569.3|transmembrane protein 168
mm10_v2_chr11_+_23665615_23665697	1.10294	AAGGCAC	ENSMUST00000109525.1|Pus10|ENSMUSG00000020280.6|pseudouridylate synthase 10 	ENSMUST00000020520.4|Pus10|ENSMUSG00000020280.6|pseudouridylate synthase 10
mm10_v2_chr9_-_48835932_48835962	1.10163	AAGGCAC	ENSMUST00000093852.3|Zbtb16|ENSMUSG00000066687.4|zinc finger and BTB domain containing 16
mm10_v2_chr18_+_11052487_11052510	1.09996	AAGGCAC	ENSMUST00000047762.7|Gata6|ENSMUSG00000005836.8|GATA binding protein 6
mm10_v2_chr8_+_46471041_46471078	1.09322	AAGGCAC	ENSMUST00000034046.5|Acsl1|ENSMUSG00000018796.6|acyl-CoA synthetase long-chain family member 1
mm10_v2_chr11_+_53350783_53350833	1.0919	AAGGCAC	ENSMUST00000060945.5|Aff4|ENSMUSG00000049470.7|AF4/FMR2 family, member 4
mm10_v2_chr12_+_108792946_108792988	1.09118	AAGGCAC	ENSMUST00000021692.7|Yy1|ENSMUSG00000021264.11|YY1 transcription factor
mm10_v2_chr2_+_30364227_30364260	1.08887	AAGGCAC	ENSMUST00000077977.7|Fam73b|ENSMUSG00000026858.12|family with sequence similarity 73, member B 	ENSMUST00000140075.2|Fam73b|ENSMUSG00000026858.12|family with sequence similarity 73, member B
mm10_v2_chr12_-_80436571_80436603	1.08878	AAGGCAC	ENSMUST00000054145.6|Dcaf5|ENSMUSG00000049106.6|DDB1 and CUL4 associated factor 5
mm10_v2_chr17_+_5841307_5841377	1.08872	AAGGCAC	ENSMUST00000002436.9|Snx9|ENSMUSG00000002365.9|sorting nexin 9
mm10_v2_chr7_-_35056467_35056556	1.06098	AAGGCAC	ENSMUST00000130491.1|Cebpg|ENSMUSG00000056216.8|CCAAT/enhancer binding protein (C/EBP), gamma
mm10_v2_chr13_+_92844750_92844790	1.05701	AAGGCAC	ENSMUST00000076169.3|Mtx3|ENSMUSG00000021704.7|metaxin 3
mm10_v2_chr5_+_64970069_64970089	1.05476	AAGGCAC	ENSMUST00000031080.8|Fam114a1|ENSMUSG00000029185.8|family with sequence similarity 114, member A1
mm10_v2_chr19_+_18670780_18670810	1.05076	AAGGCAC	ENSMUST00000025632.9|2410127L17Rik|ENSMUSG00000024726.9|RIKEN cDNA 2410127L17 gene
mm10_v2_chr7_-_67372846_67372858	1.04246	AAGGCAC	ENSMUST00000156690.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000107476.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000076325.5|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000032776.8|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A 	ENSMUST00000133074.1|Mef2a|ENSMUSG00000030557.10|myocyte enhancer factor 2A
mm10_v2_chr19_+_11965817_11965887	1.03545	AAGGCAC	ENSMUST00000025590.9|Osbp|ENSMUSG00000024687.10|oxysterol binding protein
mm10_v2_chr8_+_106935720_106935776	1.03415	AAGGCAC	ENSMUST00000047425.3|Sntb2|ENSMUSG00000041308.5|syntrophin, basic 2
mm10_v2_chr16_+_55973881_55973892	1.03174	AAGGCAC	ENSMUST00000050248.8|Rpl24|ENSMUSG00000022601.11|ribosomal protein L24
mm10_v2_chr18_+_57878620_57878678	1.03081	AAGGCAC	ENSMUST00000115366.2|Slc12a2|ENSMUSG00000024597.10|solute carrier family 12, member 2
mm10_v2_chr13_-_34994103_34994148	1.02953	AAGGCAC	ENSMUST00000171258.1|Eci2|ENSMUSG00000021417.8|enoyl-Coenzyme A delta isomerase 2 	ENSMUST00000170989.1|Eci2|ENSMUSG00000021417.8|enoyl-Coenzyme A delta isomerase 2 	ENSMUST00000021854.6|Eci2|ENSMUSG00000021417.8|enoyl-Coenzyme A delta isomerase 2 	ENSMUST00000110251.2|Eci2|ENSMUSG00000021417.8|enoyl-Coenzyme A delta isomerase 2 	ENSMUST00000167036.1|Eci2|ENSMUSG00000021417.8|enoyl-Coenzyme A delta isomerase 2 	ENSMUST00000171229.1|Eci2|ENSMUSG00000021417.8|enoyl-Coenzyme A delta isomerase 2 	ENSMUST00000178421.1|Eci2|ENSMUSG00000021417.8|enoyl-Coenzyme A delta isomerase 2
mm10_v2_chr6_-_83775767_83775826	1.02724	AAGGCAC	ENSMUST00000014892.6|Tex261|ENSMUSG00000014748.7|testis expressed gene 261
mm10_v2_chr14_+_48446340_48446429	1.0226	AAGGCAC	ENSMUST00000111735.2|Tmem260|ENSMUSG00000036339.11|transmembrane protein 260
mm10_v2_chr17_+_26715644_26715724	1.01916	AAGGCAC	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr3_-_131272077_131272101	1.01767	AAGGCAC	ENSMUST00000029610.8|Hadh|ENSMUSG00000027984.8|hydroxyacyl-Coenzyme A dehydrogenase
mm10_v2_chr16_-_38550173_38550258	1.01628	AAGGCAC	ENSMUST00000036210.6|Poglut1|ENSMUSG00000034064.8|protein O-glucosyltransferase 1
mm10_v2_chr18_-_34931993_34932007	1.01125	AAGGCAC	ENSMUST00000025218.7|Etf1|ENSMUSG00000024360.7|eukaryotic translation termination factor 1
mm10_v2_chr12_-_3309912_3309975	1.0076	AAGGCAC	ENSMUST00000021001.8|Rab10|ENSMUSG00000020671.8|RAB10, member RAS oncogene family
mm10_v2_chr3_-_107696462_107696574	1.00425	AAGGCAC	ENSMUST00000029490.8|Ahcyl1|ENSMUSG00000027893.8|S-adenosylhomocysteine hydrolase-like 1
mm10_v2_chr12_+_112588753_112588842	1.0022	AAGGCAC	ENSMUST00000101029.2|Inf2|ENSMUSG00000037679.8|inverted formin, FH2 and WH2 domain containing
mm10_v2_chr9_+_69397897_69397928	0.999594	AAGGCAC	ENSMUST00000034761.8|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2 	ENSMUST00000125938.1|Narg2|ENSMUSG00000032235.9|NMDA receptor-regulated gene 2
mm10_v2_chr7_-_65371210_65371287	0.997787	AAGGCAC	ENSMUST00000102592.3|Tjp1|ENSMUSG00000030516.8|tight junction protein 1
mm10_v2_chr4_-_56947411_56947447	0.991692	AAGGCAC	ENSMUST00000107609.3|Tmem245|ENSMUSG00000055296.8|transmembrane protein 245 	ENSMUST00000068792.6|Tmem245|ENSMUSG00000055296.8|transmembrane protein 245
mm10_v2_chr6_+_147091379_147091528	0.990469	AAGGCAC	ENSMUST00000036003.7|Klhl42|ENSMUSG00000040102.9|kelch-like 42
mm10_v2_chr9_+_108662098_108662219	0.988637	AAGGCAC	ENSMUST00000035222.5|Slc25a20|ENSMUSG00000032602.5|solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20
mm10_v2_chr1_-_72284248_72284314	0.988014	AAGGCAC	ENSMUST00000097698.4|Pecr|ENSMUSG00000026189.7|peroxisomal trans-2-enoyl-CoA reductase 	ENSMUST00000027381.6|Pecr|ENSMUSG00000026189.7|peroxisomal trans-2-enoyl-CoA reductase
mm10_v2_chr10_-_31609184_31609184	0.980536	AAGGCAC	ENSMUST00000081989.6|Rnf217|ENSMUSG00000063760.8|ring finger protein 217
mm10_v2_chr9_+_32116040_32116136	0.979647	AAGGCAC	ENSMUST00000174641.1|Arhgap32|ENSMUSG00000041444.8|Rho GTPase activating protein 32
mm10_v2_chr2_-_18392736_18392838	0.977997	AAGGCAC	ENSMUST00000091418.5|Dnajc1|ENSMUSG00000026740.6|DnaJ (Hsp40) homolog, subfamily C, member 1 	ENSMUST00000166495.1|Dnajc1|ENSMUSG00000026740.6|DnaJ (Hsp40) homolog, subfamily C, member 1
mm10_v2_chr4_+_129287614_129287644	0.97643	AAGGCAC	ENSMUST00000102599.3|Sync|ENSMUSG00000001333.9|syncoilin
mm10_v2_chr11_+_119022962_119023104	0.973433	AAGGCAC	ENSMUST00000026662.7|Cbx2|ENSMUSG00000025577.7|chromobox 2
mm10_v2_chr5_+_53049346_53049363	0.972238	AAGGCAC	ENSMUST00000094787.4|Slc34a2|ENSMUSG00000029188.8|solute carrier family 34 (sodium phosphate), member 2
mm10_v2_chr1_-_54557595_54557698	0.970305	AAGGCAC	ENSMUST00000097739.3|Pgap1|ENSMUSG00000073678.3|post-GPI attachment to proteins 1
mm10_v2_chr15_+_102406143_102406380	0.958742	AAGGCAC	ENSMUST00000170884.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000165924.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000163709.1|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1 	ENSMUST00000001326.6|Sp1|ENSMUSG00000001280.6|trans-acting transcription factor 1
mm10_v2_chr7_+_114718643_114718675	0.958323	AAGGCAC	ENSMUST00000032902.4|Calcb|ENSMUSG00000030666.5|calcitonin-related polypeptide, beta 	ENSMUST00000182816.1|Calcb|ENSMUSG00000030666.5|calcitonin-related polypeptide, beta
mm10_v2_chr15_-_37007382_37007402	0.954679	AAGGCAC	ENSMUST00000078976.7|Zfp706|ENSMUSG00000062397.7|zinc finger protein 706
mm10_v2_chr2_+_128818104_128818135	0.952081	AAGGCAC	ENSMUST00000110325.1|Tmem87b|ENSMUSG00000014353.8|transmembrane protein 87B
mm10_v2_chr2_-_64097994_64098023	0.952045	AAGGCAC	ENSMUST00000131615.2|Fign|ENSMUSG00000075324.7|fidgetin
mm10_v2_chr13_+_96542727_96542775	0.950795	AAGGCAC	ENSMUST00000077672.4|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 	ENSMUST00000109444.2|Col4a3bp|ENSMUSG00000021669.8|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
mm10_v2_chr11_-_90390895_90390926	0.947046	AAGGCAC	ENSMUST00000004051.7|Hlf|ENSMUSG00000003949.10|hepatic leukemia factor
mm10_v2_chr8_+_88118747_88118777	0.947009	AAGGCAC	ENSMUST00000095214.3|Cnep1r1|ENSMUSG00000036810.10|CTD nuclear envelope phosphatase 1 regulatory subunit 1
mm10_v2_chr16_-_15594507_15594531	0.936738	AAGGCAC	ENSMUST00000115776.1|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2 	ENSMUST00000115777.3|Ube2v2|ENSMUSG00000022674.8|ubiquitin-conjugating enzyme E2 variant 2
mm10_v2_chr10_-_115384388_115384435	0.934078	AAGGCAC	ENSMUST00000020346.4|Thap2|ENSMUSG00000020137.4|THAP domain containing, apoptosis associated protein 2
mm10_v2_chr19_+_44931119_44931172	0.928224	AAGGCAC	ENSMUST00000096053.3|Fam178a|ENSMUSG00000036097.7|family with sequence similarity 178, member A
mm10_v2_chr11_+_72607221_72607307	0.926694	AAGGCAC	ENSMUST00000021148.6|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1 	ENSMUST00000138247.1|Ube2g1|ENSMUSG00000020794.7|ubiquitin-conjugating enzyme E2G 1
mm10_v2_chr15_+_58933774_58933836	0.925154	AAGGCAC	ENSMUST00000022980.3|Ndufb9|ENSMUSG00000022354.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9
mm10_v2_chr14_+_45351473_45351473	0.924825	AAGGCAC	ENSMUST00000111835.2|Styx|ENSMUSG00000053205.8|serine/threonine/tyrosine interaction protein
mm10_v2_chr16_+_58727910_58728059	0.923546	AAGGCAC	ENSMUST00000023426.5|Cldn25|ENSMUSG00000022744.6|claudin 25 	ENSMUST00000162057.1|Cldn25|ENSMUSG00000022744.6|claudin 25 	ENSMUST00000162191.1|Cldn25|ENSMUSG00000022744.6|claudin 25
mm10_v2_chr18_+_10725530_10725564	0.923359	AAGGCAC	ENSMUST00000052838.4|Mib1|ENSMUSG00000024294.7|mindbomb homolog 1 (Drosophila)
mm10_v2_chr15_+_85735754_85735808	0.920942	AAGGCAC	ENSMUST00000109422.1|Ppara|ENSMUSG00000022383.7|peroxisome proliferator activated receptor alpha
mm10_v2_chr14_+_34819811_34819834	0.919972	AAGGCAC	ENSMUST00000043349.5|Grid1|ENSMUSG00000041078.6|glutamate receptor, ionotropic, delta 1
mm10_v2_chr17_+_8283762_8283852	0.917888	AAGGCAC	ENSMUST00000155364.1|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1 	ENSMUST00000046754.8|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1 	ENSMUST00000124023.1|Mpc1|ENSMUSG00000023861.11|mitochondrial pyruvate carrier 1
mm10_v2_chr16_-_59555752_59555752	0.917511	AAGGCAC	ENSMUST00000179383.1|Crybg3|ENSMUSG00000022723.9|beta-gamma crystallin domain containing 3 	ENSMUST00000044604.8|Crybg3|ENSMUSG00000022723.9|beta-gamma crystallin domain containing 3
mm10_v2_chr10_+_21994666_21994694	0.915852	AAGGCAC	ENSMUST00000020145.5|Sgk1|ENSMUSG00000019970.9|serum/glucocorticoid regulated kinase 1
mm10_v2_chr9_+_111118070_111118183	0.914979	AAGGCAC	ENSMUST00000035078.6|Lrrfip2|ENSMUSG00000032497.9|leucine rich repeat (in FLII) interacting protein 2 	ENSMUST00000098340.2|Lrrfip2|ENSMUSG00000032497.9|leucine rich repeat (in FLII) interacting protein 2
mm10_v2_chr11_-_97187872_97187926	0.909966	AAGGCAC	ENSMUST00000001479.4|Kpnb1|ENSMUSG00000001440.5|karyopherin (importin) beta 1
mm10_v2_chr17_+_26414820_26414965	0.905367	AAGGCAC	ENSMUST00000182897.1|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila) 	ENSMUST00000183077.1|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila) 	ENSMUST00000053020.7|Neurl1b|ENSMUSG00000034413.8|neuralized homolog 1b (Drosophila)
mm10_v2_chr8_+_47533639_47533709	0.902413	AAGGCAC	ENSMUST00000033973.7|Rwdd4a|ENSMUSG00000031568.10|RWD domain containing 4A 	ENSMUST00000176379.1|Rwdd4a|ENSMUSG00000031568.10|RWD domain containing 4A
mm10_v2_chr12_+_111039334_111039400	0.902214	AAGGCAC	ENSMUST00000084968.7|Rcor1|ENSMUSG00000037896.11|REST corepressor 1
mm10_v2_chr12_+_4769278_4769338	0.893005	AAGGCAC	ENSMUST00000020967.4|Pfn4|ENSMUSG00000020639.7|profilin family, member 4
mm10_v2_chr9_-_59486610_59486621	0.890433	AAGGCAC	ENSMUST00000171975.1|Arih1|ENSMUSG00000025234.5|ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)
mm10_v2_chr3_-_94786469_94786492	0.886649	AAGGCAC	ENSMUST00000107273.1|Cgn|ENSMUSG00000068876.8|cingulin
mm10_v2_chr19_-_3575708_3575756	0.885731	AAGGCAC	ENSMUST00000113997.2|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000025846.8|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3 	ENSMUST00000172362.1|Ppp6r3|ENSMUSG00000024908.8|protein phosphatase 6, regulatory subunit 3
mm10_v2_chr4_+_106316187_106316243	0.884352	AAGGCAC	ENSMUST00000165709.1|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24 	ENSMUST00000106798.1|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24 	ENSMUST00000094933.4|Usp24|ENSMUSG00000028514.9|ubiquitin specific peptidase 24
mm10_v2_chr11_-_109298121_109298142	0.88101	AAGGCAC	ENSMUST00000020920.3|Rgs9|ENSMUSG00000020599.7|regulator of G-protein signaling 9
mm10_v2_chr15_+_89253035_89253035	0.879662	AAGGCAC	ENSMUST00000088788.3|Ppp6r2|ENSMUSG00000036561.7|protein phosphatase 6, regulatory subunit 2
mm10_v2_chrX_-_102644210_102644254	0.874873	AAGGCAC	ENSMUST00000052012.7|Phka1|ENSMUSG00000034055.10|phosphorylase kinase alpha 1 	ENSMUST00000043596.5|Phka1|ENSMUSG00000034055.10|phosphorylase kinase alpha 1 	ENSMUST00000119229.1|Phka1|ENSMUSG00000034055.10|phosphorylase kinase alpha 1 	ENSMUST00000122022.1|Phka1|ENSMUSG00000034055.10|phosphorylase kinase alpha 1 	ENSMUST00000120270.1|Phka1|ENSMUSG00000034055.10|phosphorylase kinase alpha 1 	ENSMUST00000113611.2|Phka1|ENSMUSG00000034055.10|phosphorylase kinase alpha 1
mm10_v2_chr12_+_80644212_80644265	0.869865	AAGGCAC	ENSMUST00000085245.5|Slc39a9|ENSMUSG00000048833.8|solute carrier family 39 (zinc transporter), member 9
mm10_v2_chr7_+_79273201_79273270	0.865725	AAGGCAC	ENSMUST00000037315.6|Abhd2|ENSMUSG00000039202.6|abhydrolase domain containing 2
mm10_v2_chr9_+_45838572_45838592	0.862288	AAGGCAC	ENSMUST00000078111.4|Bace1|ENSMUSG00000032086.6|beta-site APP cleaving enzyme 1 	ENSMUST00000034591.4|Bace1|ENSMUSG00000032086.6|beta-site APP cleaving enzyme 1
mm10_v2_chr2_+_166805506_166805605	0.861137	AAGGCAC	ENSMUST00000099078.3|Arfgef2|ENSMUSG00000074582.4|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
mm10_v2_chr3_-_116007399_116007411	0.860841	AAGGCAC	ENSMUST00000067485.3|Slc30a7|ENSMUSG00000054414.3|solute carrier family 30 (zinc transporter), member 7
mm10_v2_chr16_-_10993100_10993121	0.858844	AAGGCAC	ENSMUST00000023143.7|Litaf|ENSMUSG00000022500.8|LPS-induced TN factor
mm10_v2_chr7_+_59228743_59228769	0.856376	AAGGCAC	ENSMUST00000107537.1|Ube3a|ENSMUSG00000025326.8|ubiquitin protein ligase E3A
mm10_v2_chr15_-_67113909_67113992	0.85089	AAGGCAC	ENSMUST00000092640.5|St3gal1|ENSMUSG00000013846.9|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
mm10_v2_chr12_-_4907705_4907754	0.842841	AAGGCAC	ENSMUST00000020962.5|Ubxn2a|ENSMUSG00000020634.6|UBX domain protein 2A
mm10_v2_chr11_+_79591120_79591224	0.840281	AAGGCAC	ENSMUST00000017783.6|Rab11fip4|ENSMUSG00000017639.7|RAB11 family interacting protein 4 (class II)
mm10_v2_chr13_-_53377355_53377373	0.839058	AAGGCAC	ENSMUST00000021920.6|Sptlc1|ENSMUSG00000021468.7|serine palmitoyltransferase, long chain base subunit 1
mm10_v2_chr11_+_50131342_50131426	0.839036	AAGGCAC	ENSMUST00000093138.6|Tbc1d9b|ENSMUSG00000036644.9|TBC1 domain family, member 9B 	ENSMUST00000101270.4|Tbc1d9b|ENSMUSG00000036644.9|TBC1 domain family, member 9B
mm10_v2_chr7_-_80402743_80402762	0.837347	AAGGCAC	ENSMUST00000122232.1|Furin|ENSMUSG00000030530.9|furin (paired basic amino acid cleaving enzyme)
mm10_v2_chr12_+_4592992_4593087	0.835165	AAGGCAC	ENSMUST00000062580.7|Itsn2|ENSMUSG00000020640.9|intersectin 2
mm10_v2_chr15_+_4375462_4375511	0.833327	AAGGCAC	ENSMUST00000061925.4|Plcxd3|ENSMUSG00000049148.8|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm10_v2_chr16_+_27388869_27388980	0.83201	AAGGCAC	ENSMUST00000100026.3|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000039443.7|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50 	ENSMUST00000096127.4|Ccdc50|ENSMUSG00000038127.8|coiled-coil domain containing 50
mm10_v2_chr7_-_57387172_57387222	0.831296	AAGGCAC	ENSMUST00000068911.6|Gabrg3|ENSMUSG00000055026.7|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3
mm10_v2_chr6_-_58907120_58907131	0.831193	AAGGCAC	ENSMUST00000059539.3|Nap1l5|ENSMUSG00000055430.3|nucleosome assembly protein 1-like 5
mm10_v2_chr2_+_129065934_129065994	0.830549	AAGGCAC	ENSMUST00000035812.7|Ttl|ENSMUSG00000027394.7|tubulin tyrosine ligase
mm10_v2_chr2_+_148681023_148681197	0.826138	AAGGCAC	ENSMUST00000028928.7|Gzf1|ENSMUSG00000027439.9|GDNF-inducible zinc finger protein 1
mm10_v2_chr14_+_73142490_73142564	0.82512	AAGGCAC	ENSMUST00000170370.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 	ENSMUST00000164822.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 	ENSMUST00000165429.1|Rcbtb2|ENSMUSG00000022106.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
mm10_v2_chr5_+_129941949_129942113	0.824159	AAGGCAC	ENSMUST00000051758.7|Vkorc1l1|ENSMUSG00000066735.5|vitamin K epoxide reductase complex, subunit 1-like 1 	ENSMUST00000073945.4|Vkorc1l1|ENSMUSG00000066735.5|vitamin K epoxide reductase complex, subunit 1-like 1
mm10_v2_chr4_-_4793275_4793382	0.821159	AAGGCAC	ENSMUST00000084949.2|Impad1|ENSMUSG00000066324.2|inositol monophosphatase domain containing 1
mm10_v2_chr18_-_79109391_79109510	0.816896	AAGGCAC	ENSMUST00000025430.8|Setbp1|ENSMUSG00000024548.9|SET binding protein 1 	ENSMUST00000161465.2|Setbp1|ENSMUSG00000024548.9|SET binding protein 1
mm10_v2_chr7_-_137314394_137314445	0.812266	AAGGCAC	ENSMUST00000168203.1|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000106118.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000169486.2|Ebf3|ENSMUSG00000010476.7|early B cell factor 3 	ENSMUST00000033378.5|Ebf3|ENSMUSG00000010476.7|early B cell factor 3
mm10_v2_chr1_+_92910758_92910783	0.808685	AAGGCAC	ENSMUST00000027487.8|Rnpepl1|ENSMUSG00000026269.8|arginyl aminopeptidase (aminopeptidase B)-like 1
mm10_v2_chr1_-_13372434_13372457	0.802085	AAGGCAC	ENSMUST00000081713.4|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr5_-_121836852_121836880	0.801508	AAGGCAC	ENSMUST00000086310.1|Sh2b3|ENSMUSG00000042594.10|SH2B adaptor protein 3
mm10_v2_chr8_-_61902669_61902713	0.799761	AAGGCAC	ENSMUST00000121785.1|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein 	ENSMUST00000034057.7|Palld|ENSMUSG00000058056.9|palladin, cytoskeletal associated protein
mm10_v2_chr11_-_61579637_61579707	0.795124	AAGGCAC	ENSMUST00000147501.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000146455.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108711.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108712.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000001063.8|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108713.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000179936.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000178202.1|Epn2|ENSMUSG00000001036.11|epsin 2
mm10_v2_chrX_+_73342614_73342629	0.793937	AAGGCAC	ENSMUST00000114499.1|Zfp275|ENSMUSG00000031365.7|zinc finger protein 275 	ENSMUST00000033731.3|Zfp275|ENSMUSG00000031365.7|zinc finger protein 275
mm10_v2_chr5_+_105876532_105876585	0.793113	AAGGCAC	ENSMUST00000150440.1|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326 	ENSMUST00000031227.4|Zfp326|ENSMUSG00000029290.6|zinc finger protein 326
mm10_v2_chr1_+_74391479_74391509	0.79153	AAGGCAC	ENSMUST00000027367.7|Ctdsp1|ENSMUSG00000026176.7|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
mm10_v2_chr2_+_119325784_119325817	0.791118	AAGGCAC	ENSMUST00000102517.3|Dll4|ENSMUSG00000027314.6|delta-like 4 (Drosophila)
mm10_v2_chr12_+_110889231_110889305	0.785911	AAGGCAC	ENSMUST00000169597.1|Tecpr2|ENSMUSG00000021275.9|tectonin beta-propeller repeat containing 2 	ENSMUST00000165978.1|Tecpr2|ENSMUSG00000021275.9|tectonin beta-propeller repeat containing 2
mm10_v2_chr1_+_105663855_105663866	0.779028	AAGGCAC	ENSMUST00000086721.3|2310035C23Rik|ENSMUSG00000026319.7|RIKEN cDNA 2310035C23 gene 	ENSMUST00000039173.6|2310035C23Rik|ENSMUSG00000026319.7|RIKEN cDNA 2310035C23 gene
mm10_v2_chr4_+_8535604_8535717	0.768308	AAGGCAC	ENSMUST00000060232.7|Rab2a|ENSMUSG00000047187.9|RAB2A, member RAS oncogene family
mm10_v2_chr16_+_14705832_14705858	0.760085	AAGGCAC	ENSMUST00000023356.6|Snai2|ENSMUSG00000022676.6|snail homolog 2 (Drosophila)
mm10_v2_chr16_-_11203259_11203331	0.754071	AAGGCAC	ENSMUST00000119953.1|Rsl1d1|ENSMUSG00000005846.11|ribosomal L1 domain containing 1
mm10_v2_chr9_+_65214690_65214690	0.753585	AAGGCAC	ENSMUST00000069000.7|Parp16|ENSMUSG00000032392.10|poly (ADP-ribose) polymerase family, member 16
mm10_v2_chr15_+_34837381_34837381	0.750708	AAGGCAC	ENSMUST00000072868.3|Kcns2|ENSMUSG00000050963.6|K+ voltage-gated channel, subfamily S, 2
mm10_v2_chr2_-_104816696_104816792	0.744701	AAGGCAC	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr7_+_49246812_49246844	0.744548	AAGGCAC	ENSMUST00000184945.1|Nav2|ENSMUSG00000052512.9|neuron navigator 2
mm10_v2_chr4_-_141723401_141723436	0.744189	AAGGCAC	ENSMUST00000102484.4|Ddi2|ENSMUSG00000078515.3|DNA-damage inducible protein 2 	ENSMUST00000177592.1|Rsc1a1|ENSMUSG00000040715.11|regulatory solute carrier protein, family 1, member 1
mm10_v2_chr5_+_63649335_63649451	0.743649	AAGGCAC	ENSMUST00000159584.1|3110047P20Rik|ENSMUSG00000090061.3|RIKEN cDNA 3110047P20 gene
mm10_v2_chr10_+_95940663_95940703	0.742743	AAGGCAC	ENSMUST00000053484.6|Eea1|ENSMUSG00000036499.8|early endosome antigen 1
mm10_v2_chr8_-_27174623_27174651	0.74147	AAGGCAC	ENSMUST00000033878.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I) 	ENSMUST00000054212.6|Rab11fip1|ENSMUSG00000031488.7|RAB11 family interacting protein 1 (class I)
mm10_v2_chr7_-_109083284_109083337	0.739153	AAGGCAC	ENSMUST00000120876.1|Ric3|ENSMUSG00000048330.8|resistance to inhibitors of cholinesterase 3 homolog (C. elegans) 	ENSMUST00000055993.6|Ric3|ENSMUSG00000048330.8|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
mm10_v2_chr2_+_119547697_119547762	0.73571	AAGGCAC	ENSMUST00000014221.6|Chp1|ENSMUSG00000014077.7|calcineurin-like EF hand protein 1 	ENSMUST00000119172.1|Chp1|ENSMUSG00000014077.7|calcineurin-like EF hand protein 1
mm10_v2_chr11_-_106920681_106920735	0.734982	AAGGCAC	ENSMUST00000103067.3|Smurf2|ENSMUSG00000018363.10|SMAD specific E3 ubiquitin protein ligase 2
mm10_v2_chr11_+_58009064_58009144	0.734077	AAGGCAC	ENSMUST00000071487.6|Larp1|ENSMUSG00000037331.9|La ribonucleoprotein domain family, member 1 	ENSMUST00000178636.1|Larp1|ENSMUSG00000037331.9|La ribonucleoprotein domain family, member 1
mm10_v2_chr7_-_119720742_119720803	0.731508	AAGGCAC	ENSMUST00000033236.7|Thumpd1|ENSMUSG00000030942.7|THUMP domain containing 1
mm10_v2_chrX_+_73716577_73716618	0.720892	AAGGCAC	ENSMUST00000002084.7|Abcd1|ENSMUSG00000031378.8|ATP-binding cassette, sub-family D (ALD), member 1
mm10_v2_chr13_-_65112963_65112987	0.720021	AAGGCAC	ENSMUST00000155487.1|Hiatl1|ENSMUSG00000038212.9|hippocampus abundant transcript-like 1 	ENSMUST00000054730.8|Hiatl1|ENSMUSG00000038212.9|hippocampus abundant transcript-like 1
mm10_v2_chr3_+_32436151_32436151	0.719924	AAGGCAC	ENSMUST00000029201.7|Pik3ca|ENSMUSG00000027665.7|phosphatidylinositol 3-kinase, catalytic, alpha polypeptide
mm10_v2_chr2_+_12924041_12924113	0.718759	AAGGCAC	ENSMUST00000134794.1|Pter|ENSMUSG00000026730.6|phosphotriesterase related 	ENSMUST00000028063.4|Pter|ENSMUSG00000026730.6|phosphotriesterase related 	ENSMUST00000154269.1|Pter|ENSMUSG00000026730.6|phosphotriesterase related 	ENSMUST00000114796.3|Pter|ENSMUSG00000026730.6|phosphotriesterase related
mm10_v2_chr2_-_33371400_33371484	0.710589	AAGGCAC	ENSMUST00000113164.1|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1 	ENSMUST00000091039.2|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1 	ENSMUST00000042615.6|Ralgps1|ENSMUSG00000038831.10|Ral GEF with PH domain and SH3 binding motif 1
mm10_v2_chr16_-_78576649_78576666	0.704286	AAGGCAC	ENSMUST00000114220.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed 	ENSMUST00000114219.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed 	ENSMUST00000114218.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed
mm10_v2_chr15_-_66286224_66286224	0.703813	AAGGCAC	ENSMUST00000070256.7|Kcnq3|ENSMUSG00000056258.8|potassium voltage-gated channel, subfamily Q, member 3
mm10_v2_chr14_-_75787031_75787042	0.698061	AAGGCAC	ENSMUST00000022580.6|Slc25a30|ENSMUSG00000022003.6|solute carrier family 25, member 30
mm10_v2_chr19_-_7105729_7105729	0.695594	AAGGCAC	ENSMUST00000113383.2|Flrt1|ENSMUSG00000047787.7|fibronectin leucine rich transmembrane protein 1
mm10_v2_chrX_+_140456613_140456632	0.695264	AAGGCAC	ENSMUST00000033809.3|Prps1|ENSMUSG00000031432.3|phosphoribosyl pyrophosphate synthetase 1
mm10_v2_chr11_-_76846968_76847045	0.693882	AAGGCAC	ENSMUST00000021201.5|Cpd|ENSMUSG00000020841.5|carboxypeptidase D
mm10_v2_chr2_+_19658055_19658072	0.690865	AAGGCAC	ENSMUST00000052168.4|Otud1|ENSMUSG00000043415.4|OTU domain containing 1
mm10_v2_chr18_+_24205303_24205348	0.687568	AAGGCAC	ENSMUST00000000430.7|Galnt1|ENSMUSG00000000420.9|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1
mm10_v2_chr3_+_121426495_121426541	0.685744	AAGGCAC	ENSMUST00000029773.8|Cnn3|ENSMUSG00000053931.7|calponin 3, acidic
mm10_v2_chr7_+_49759100_49759163	0.684407	AAGGCAC	ENSMUST00000085272.5|Htatip2|ENSMUSG00000039745.7|HIV-1 tat interactive protein 2, homolog (human)
mm10_v2_chr11_-_100939357_100939456	0.681658	AAGGCAC	ENSMUST00000092671.5|Stat3|ENSMUSG00000004040.10|signal transducer and activator of transcription 3 	ENSMUST00000103114.1|Stat3|ENSMUSG00000004040.10|signal transducer and activator of transcription 3
mm10_v2_chr1_-_176275274_176275308	0.678323	AAGGCAC	ENSMUST00000111166.1|Pld5|ENSMUSG00000055214.9|phospholipase D family, member 5 	ENSMUST00000065967.7|Pld5|ENSMUSG00000055214.9|phospholipase D family, member 5
mm10_v2_chr5_+_72914264_72914304	0.678122	AAGGCAC	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr8_+_13287887_13288013	0.677182	AAGGCAC	ENSMUST00000045229.5|Tmco3|ENSMUSG00000038497.6|transmembrane and coiled-coil domains 3
mm10_v2_chr6_+_29348069_29348123	0.673532	AAGGCAC	ENSMUST00000173216.1|Calu|ENSMUSG00000029767.10|calumenin 	ENSMUST00000031779.10|Calu|ENSMUSG00000029767.10|calumenin 	ENSMUST00000090481.7|Calu|ENSMUSG00000029767.10|calumenin
mm10_v2_chr2_+_101678403_101678469	0.6713	AAGGCAC	ENSMUST00000004949.7|Traf6|ENSMUSG00000027164.8|TNF receptor-associated factor 6
mm10_v2_chr18_+_77938452_77938477	0.6709	AAGGCAC	ENSMUST00000044622.5|Epg5|ENSMUSG00000039840.7|ectopic P-granules autophagy protein 5 homolog (C. elegans)
mm10_v2_chr11_+_95712673_95712673	0.670303	AAGGCAC	ENSMUST00000107717.1|Zfp652|ENSMUSG00000075595.3|zinc finger protein 652
mm10_v2_chr4_-_41569502_41569551	0.669554	AAGGCAC	ENSMUST00000108049.2|Fam219a|ENSMUSG00000028439.8|family with sequence similarity 219, member A 	ENSMUST00000108052.3|Fam219a|ENSMUSG00000028439.8|family with sequence similarity 219, member A 	ENSMUST00000108050.1|Fam219a|ENSMUSG00000028439.8|family with sequence similarity 219, member A
mm10_v2_chr6_+_72355425_72355487	0.669004	AAGGCAC	ENSMUST00000069695.2|Tmem150a|ENSMUSG00000055912.2|transmembrane protein 150A 	ENSMUST00000132243.1|Tmem150a|ENSMUSG00000055912.2|transmembrane protein 150A
mm10_v2_chr14_-_21052420_21052450	0.668847	AAGGCAC	ENSMUST00000154460.1|Ap3m1|ENSMUSG00000021824.6|adaptor-related protein complex 3, mu 1 subunit
mm10_v2_chr15_-_91573181_91573261	0.666395	AAGGCAC	ENSMUST00000109283.1|Slc2a13|ENSMUSG00000036298.10|solute carrier family 2 (facilitated glucose transporter), member 13
mm10_v2_chr14_+_54254124_54254247	0.66399	AAGGCAC	ENSMUST00000180359.1|Abhd4|ENSMUSG00000040997.7|abhydrolase domain containing 4
mm10_v2_chr11_-_106487796_106487821	0.663941	AAGGCAC	ENSMUST00000001059.2|Ern1|ENSMUSG00000020715.3|endoplasmic reticulum (ER) to nucleus signalling 1 	ENSMUST00000106799.1|Ern1|ENSMUSG00000020715.3|endoplasmic reticulum (ER) to nucleus signalling 1 	ENSMUST00000106800.1|Ern1|ENSMUSG00000020715.3|endoplasmic reticulum (ER) to nucleus signalling 1
mm10_v2_chr5_+_93093428_93093457	0.663806	AAGGCAC	ENSMUST00000074733.7|Sept11|ENSMUSG00000058013.8|septin 11
mm10_v2_chr2_-_173276526_173276544	0.656035	AAGGCAC	ENSMUST00000036248.6|Pmepa1|ENSMUSG00000038400.9|prostate transmembrane protein, androgen induced 1
mm10_v2_chr1_+_65186727_65186750	0.650039	AAGGCAC	ENSMUST00000097707.4|Pikfyve|ENSMUSG00000025949.9|phosphoinositide kinase, FYVE finger containing 	ENSMUST00000081154.7|Pikfyve|ENSMUSG00000025949.9|phosphoinositide kinase, FYVE finger containing
mm10_v2_chr5_-_115134907_115134975	0.646903	AAGGCAC	ENSMUST00000060798.5|Unc119b|ENSMUSG00000046562.5|unc-119 homolog B (C. elegans)
mm10_v2_chr16_-_96082389_96082481	0.646366	AAGGCAC	ENSMUST00000099502.2|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000023631.8|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000113829.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1 	ENSMUST00000153398.1|Brwd1|ENSMUSG00000022914.9|bromodomain and WD repeat domain containing 1
mm10_v2_chr10_+_62980233_62980262	0.64625	AAGGCAC	ENSMUST00000131718.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2 	ENSMUST00000119567.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2 	ENSMUST00000122231.1|Rufy2|ENSMUSG00000020070.12|RUN and FYVE domain-containing 2
mm10_v2_chr3_-_58525867_58525873	0.64551	AAGGCAC	ENSMUST00000029385.7|Serp1|ENSMUSG00000027808.7|stress-associated endoplasmic reticulum protein 1
mm10_v2_chr17_-_45592262_45592411	0.640426	AAGGCAC	ENSMUST00000164769.1|Slc29a1|ENSMUSG00000023942.9|solute carrier family 29 (nucleoside transporters), member 1
mm10_v2_chr4_+_128993224_128993290	0.63963	AAGGCAC	ENSMUST00000030583.6|Ak2|ENSMUSG00000028792.8|adenylate kinase 2 	ENSMUST00000102604.4|Ak2|ENSMUSG00000028792.8|adenylate kinase 2
mm10_v2_chr4_-_138913915_138913983	0.638338	AAGGCAC	ENSMUST00000097830.3|Otud3|ENSMUSG00000041161.8|OTU domain containing 3
mm10_v2_chr16_+_20733104_20733158	0.633169	AAGGCAC	ENSMUST00000115423.1|Chrd|ENSMUSG00000006958.7|chordin 	ENSMUST00000007171.6|Chrd|ENSMUSG00000006958.7|chordin
mm10_v2_chr2_-_26933781_26933928	0.627003	AAGGCAC	ENSMUST00000154651.1|Surf4|ENSMUSG00000014867.3|surfeit gene 4 	ENSMUST00000015011.3|Surf4|ENSMUSG00000014867.3|surfeit gene 4
mm10_v2_chr1_+_167349976_167350065	0.623422	AAGGCAC	ENSMUST00000028004.9|Aldh9a1|ENSMUSG00000026687.9|aldehyde dehydrogenase 9, subfamily A1
mm10_v2_chr16_-_52454074_52454074	0.622899	AAGGCAC	ENSMUST00000023312.7|Alcam|ENSMUSG00000022636.7|activated leukocyte cell adhesion molecule
mm10_v2_chrX_-_36902877_36902904	0.621662	AAGGCAC	ENSMUST00000057093.6|Nkrf|ENSMUSG00000044149.6|NF-kappaB repressing factor
mm10_v2_chr3_-_36475688_36475843	0.6214	AAGGCAC	ENSMUST00000029266.8|Anxa5|ENSMUSG00000027712.8|annexin A5
mm10_v2_chr13_+_81657732_81657846	0.621004	AAGGCAC	ENSMUST00000049055.6|Lysmd3|ENSMUSG00000035840.6|LysM, putative peptidoglycan-binding, domain containing 3
mm10_v2_chr7_+_133637543_133637559	0.618303	AAGGCAC	ENSMUST00000051169.6|2700050L05Rik|ENSMUSG00000039990.9|RIKEN cDNA 2700050L05 gene
mm10_v2_chr10_-_128804353_128804374	0.616039	AAGGCAC	ENSMUST00000051011.7|Tmem198b|ENSMUSG00000047090.7|transmembrane protein 198b
mm10_v2_chr8_+_75033673_75033702	0.614785	AAGGCAC	ENSMUST00000078847.5|Tom1|ENSMUSG00000042870.8|target of myb1 homolog (chicken) 	ENSMUST00000165630.1|Tom1|ENSMUSG00000042870.8|target of myb1 homolog (chicken)
mm10_v2_chr14_+_7817957_7817994	0.61414	AAGGCAC	ENSMUST00000052678.8|Flnb|ENSMUSG00000025278.8|filamin, beta
mm10_v2_chr6_-_94700137_94700176	0.612409	AAGGCAC	ENSMUST00000101126.2|Lrig1|ENSMUSG00000030029.8|leucine-rich repeats and immunoglobulin-like domains 1 	ENSMUST00000032105.4|Lrig1|ENSMUSG00000030029.8|leucine-rich repeats and immunoglobulin-like domains 1
mm10_v2_chr5_+_110230975_110231099	0.610531	AAGGCAC	ENSMUST00000031474.7|Ankle2|ENSMUSG00000029501.8|ankyrin repeat and LEM domain containing 2 	ENSMUST00000086674.5|Ankle2|ENSMUSG00000029501.8|ankyrin repeat and LEM domain containing 2
mm10_v2_chr3_-_152982240_152982251	0.609102	AAGGCAC	ENSMUST00000044278.5|St6galnac5|ENSMUSG00000039037.5|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm10_v2_chr5_+_52741569_52741623	0.606953	AAGGCAC	ENSMUST00000031081.4|Pi4k2b|ENSMUSG00000029186.6|phosphatidylinositol 4-kinase type 2 beta 	ENSMUST00000031082.6|Pi4k2b|ENSMUSG00000029186.6|phosphatidylinositol 4-kinase type 2 beta
mm10_v2_chr18_-_74064899_74064943	0.605839	AAGGCAC	ENSMUST00000159162.1|Mapk4|ENSMUSG00000024558.6|mitogen-activated protein kinase 4 	ENSMUST00000091851.3|Mapk4|ENSMUSG00000024558.6|mitogen-activated protein kinase 4
mm10_v2_chr11_+_96365752_96365752	0.602614	AAGGCAC	ENSMUST00000019117.2|Hoxb1|ENSMUSG00000018973.2|homeobox B1
mm10_v2_chr19_-_60581013_60581025	0.600732	AAGGCAC	ENSMUST00000111460.3|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1 	ENSMUST00000081790.7|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1 	ENSMUST00000166712.1|Cacul1|ENSMUSG00000033417.9|CDK2 associated, cullin domain 1
mm10_v2_chr4_-_143212691_143212728	0.598822	AAGGCAC	ENSMUST00000105778.1|Prdm2|ENSMUSG00000057637.7|PR domain containing 2, with ZNF domain 	ENSMUST00000134791.1|Prdm2|ENSMUSG00000057637.7|PR domain containing 2, with ZNF domain
mm10_v2_chr4_+_152297205_152297227	0.597768	AAGGCAC	ENSMUST00000048892.7|Icmt|ENSMUSG00000039662.10|isoprenylcysteine carboxyl methyltransferase
mm10_v2_chr14_-_21989475_21989601	0.591619	AAGGCAC	ENSMUST00000043409.7|Zfp503|ENSMUSG00000039081.9|zinc finger protein 503
mm10_v2_chr1_+_176814660_176814660	0.589754	AAGGCAC	ENSMUST00000056773.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8 	ENSMUST00000027785.8|Sdccag8|ENSMUSG00000026504.11|serologically defined colon cancer antigen 8
mm10_v2_chr3_-_116808166_116808198	0.587884	AAGGCAC	ENSMUST00000040603.7|Agl|ENSMUSG00000033400.8|amylo-1,6-glucosidase, 4-alpha-glucanotransferase
mm10_v2_chr6_+_38381469_38381528	0.586539	AAGGCAC	ENSMUST00000162554.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26 	ENSMUST00000161751.1|Ttc26|ENSMUSG00000056832.8|tetratricopeptide repeat domain 26
mm10_v2_chr18_-_21300129_21300168	0.582892	AAGGCAC	ENSMUST00000049260.6|Garem|ENSMUSG00000042680.7|GRB2 associated, regulator of MAPK1
mm10_v2_chr12_+_116281180_116281229	0.581384	AAGGCAC	ENSMUST00000100986.2|Esyt2|ENSMUSG00000021171.7|extended synaptotagmin-like protein 2
mm10_v2_chr19_+_42147373_42147400	0.576408	AAGGCAC	ENSMUST00000061111.9|Marveld1|ENSMUSG00000044345.9|MARVEL (membrane-associating) domain containing 1
mm10_v2_chr7_-_44496406_44496529	0.574346	AAGGCAC	ENSMUST00000118515.1|Emc10|ENSMUSG00000008140.11|ER membrane protein complex subunit 10 	ENSMUST00000138328.1|Emc10|ENSMUSG00000008140.11|ER membrane protein complex subunit 10 	ENSMUST00000008284.8|Emc10|ENSMUSG00000008140.11|ER membrane protein complex subunit 10 	ENSMUST00000118808.1|Emc10|ENSMUSG00000008140.11|ER membrane protein complex subunit 10
mm10_v2_chr1_+_121431049_121431124	0.569811	AAGGCAC	ENSMUST00000036025.9|Ccdc93|ENSMUSG00000026339.12|coiled-coil domain containing 93 	ENSMUST00000112621.1|Ccdc93|ENSMUSG00000026339.12|coiled-coil domain containing 93
mm10_v2_chr5_-_66618772_66618828	0.564929	AAGGCAC	ENSMUST00000162994.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159512.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159786.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2
mm10_v2_chr13_-_100650981_100651085	0.563774	AAGGCAC	ENSMUST00000022136.6|Rad17|ENSMUSG00000021635.7|RAD17 homolog (S. pombe) 	ENSMUST00000177848.1|Rad17|ENSMUSG00000021635.7|RAD17 homolog (S. pombe)
mm10_v2_chr14_-_67933512_67933585	0.563372	AAGGCAC	ENSMUST00000039135.4|Dock5|ENSMUSG00000044447.4|dedicator of cytokinesis 5
mm10_v2_chr8_+_88199194_88199224	0.563331	AAGGCAC	ENSMUST00000119033.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000066748.3|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5 	ENSMUST00000118952.1|Papd5|ENSMUSG00000036779.6|PAP associated domain containing 5
mm10_v2_chr17_+_87107621_87107684	0.563176	AAGGCAC	ENSMUST00000041369.6|Socs5|ENSMUSG00000037104.8|suppressor of cytokine signaling 5
mm10_v2_chr3_+_137867675_137867797	0.563116	AAGGCAC	ENSMUST00000090178.5|Dnajb14|ENSMUSG00000074212.3|DnaJ (Hsp40) homolog, subfamily B, member 14
mm10_v2_chr6_+_7844806_7844859	0.561801	AAGGCAC	ENSMUST00000040159.4|C1galt1|ENSMUSG00000042460.4|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
mm10_v2_chr2_+_48949495_48949522	0.56136	AAGGCAC	ENSMUST00000112745.1|Mbd5|ENSMUSG00000036792.6|methyl-CpG binding domain protein 5
mm10_v2_chr4_+_123904832_123904851	0.558879	AAGGCAC	ENSMUST00000030400.7|Mycbp|ENSMUSG00000028647.7|c-myc binding protein
mm10_v2_chr9_+_94669876_94669928	0.555816	AAGGCAC	ENSMUST00000033463.9|Slc9a9|ENSMUSG00000031129.9|solute carrier family 9 (sodium/hydrogen exchanger), member 9
mm10_v2_chr1_+_6214627_6214683	0.555232	AAGGCAC	ENSMUST00000027040.6|Rb1cc1|ENSMUSG00000025907.8|RB1-inducible coiled-coil 1
mm10_v2_chr2_-_35200923_35201120	0.553678	AAGGCAC	ENSMUST00000028238.8|Rab14|ENSMUSG00000026878.10|RAB14, member RAS oncogene family 	ENSMUST00000113025.1|Rab14|ENSMUSG00000026878.10|RAB14, member RAS oncogene family
mm10_v2_chr16_-_17928136_17928219	0.553393	AAGGCAC	ENSMUST00000003622.8|Slc25a1|ENSMUSG00000003528.8|solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
mm10_v2_chr12_-_64965496_64965538	0.551642	AAGGCAC	ENSMUST00000021331.7|Klhl28|ENSMUSG00000020948.8|kelch-like 28
mm10_v2_chr4_+_47353222_47353265	0.551068	AAGGCAC	ENSMUST00000007757.8|Tgfbr1|ENSMUSG00000007613.9|transforming growth factor, beta receptor I
mm10_v2_chr2_-_23572038_23572112	0.550049	AAGGCAC	ENSMUST00000132484.1|Spopl|ENSMUSG00000026771.8|speckle-type POZ protein-like
mm10_v2_chr5_-_29378337_29378401	0.54828	AAGGCAC	ENSMUST00000055195.4|Lmbr1|ENSMUSG00000010721.9|limb region 1 	ENSMUST00000179191.1|Lmbr1|ENSMUSG00000010721.9|limb region 1
mm10_v2_chr3_-_122619663_122619680	0.547673	AAGGCAC	ENSMUST00000162409.1|Fnbp1l|ENSMUSG00000039735.9|formin binding protein 1-like
mm10_v2_chr1_+_178798438_178798467	0.543197	AAGGCAC	ENSMUST00000160789.1|Kif26b|ENSMUSG00000026494.6|kinesin family member 26B
mm10_v2_chr9_+_44604844_44604921	0.542415	AAGGCAC	ENSMUST00000170489.1|Ddx6|ENSMUSG00000032097.9|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
mm10_v2_chr7_+_141467362_141467427	0.541288	AAGGCAC	ENSMUST00000106000.2|Cd151|ENSMUSG00000025510.7|CD151 antigen 	ENSMUST00000177840.1|Cd151|ENSMUSG00000025510.7|CD151 antigen
mm10_v2_chr8_+_78509319_78509399	0.539991	AAGGCAC	ENSMUST00000034111.8|Slc10a7|ENSMUSG00000031684.10|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm10_v2_chr4_+_59003121_59003215	0.537847	AAGGCAC	ENSMUST00000095070.3|Dnajc25|ENSMUSG00000070972.7|DnaJ (Hsp40) homolog, subfamily C, member 25 	ENSMUST00000174664.1|Gm20503|ENSMUSG00000092345.1|predicted gene 20503
mm10_v2_chr2_+_129800451_129800526	0.537409	AAGGCAC	ENSMUST00000165413.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35 	ENSMUST00000166282.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35
mm10_v2_chr6_-_108185552_108185587	0.536435	AAGGCAC	ENSMUST00000167338.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000172188.1|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1 	ENSMUST00000032191.9|Sumf1|ENSMUSG00000030101.9|sulfatase modifying factor 1
mm10_v2_chr5_-_92083455_92083557	0.533833	AAGGCAC	ENSMUST00000169094.1|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2 	ENSMUST00000167918.1|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2
mm10_v2_chr13_+_42052015_42052072	0.526526	AAGGCAC	ENSMUST00000060148.5|Hivep1|ENSMUSG00000021366.7|human immunodeficiency virus type I enhancer binding protein 1
mm10_v2_chr14_+_79587691_79587712	0.517633	AAGGCAC	ENSMUST00000054908.8|Sugt1|ENSMUSG00000022024.9|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
mm10_v2_chr13_+_21478907_21478907	0.505804	AAGGCAC	ENSMUST00000062609.5|Zkscan4|ENSMUSG00000054931.6|zinc finger with KRAB and SCAN domains 4
mm10_v2_chr11_+_4637734_4637789	0.505799	AAGGCAC	ENSMUST00000109930.2|Ascc2|ENSMUSG00000020412.10|activating signal cointegrator 1 complex subunit 2 	ENSMUST00000070257.7|Ascc2|ENSMUSG00000020412.10|activating signal cointegrator 1 complex subunit 2
mm10_v2_chr1_-_36445248_36445271	0.504226	AAGGCAC	ENSMUST00000125304.1|Lman2l|ENSMUSG00000001143.7|lectin, mannose-binding 2-like 	ENSMUST00000115011.1|Lman2l|ENSMUSG00000001143.7|lectin, mannose-binding 2-like
mm10_v2_chr9_-_52679429_52679429	0.500916	AAGGCAC	ENSMUST00000098768.2|AI593442|ENSMUSG00000078307.2|expressed sequence AI593442
mm10_v2_chr1_-_17097839_17097889	0.500009	AAGGCAC	ENSMUST00000038382.4|Jph1|ENSMUSG00000042686.4|junctophilin 1
mm10_v2_chr3_-_142881942_142882017	0.499114	AAGGCAC	ENSMUST00000043812.8|Pkn2|ENSMUSG00000004591.10|protein kinase N2
mm10_v2_chr14_+_25842146_25842170	0.497862	AAGGCAC	ENSMUST00000022416.8|Anxa11|ENSMUSG00000021866.9|annexin A11
mm10_v2_chr6_-_142964404_142964452	0.497718	AAGGCAC	ENSMUST00000032421.3|St8sia1|ENSMUSG00000030283.5|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
mm10_v2_chr2_-_37430835_37430919	0.496715	AAGGCAC	ENSMUST00000053098.5|Zbtb6|ENSMUSG00000066798.3|zinc finger and BTB domain containing 6
mm10_v2_chr1_-_60566708_60566769	0.493026	AAGGCAC	ENSMUST00000027168.5|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 	ENSMUST00000090293.4|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 	ENSMUST00000140485.1|Raph1|ENSMUSG00000026014.9|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
mm10_v2_chr1_+_62703285_62703317	0.49262	AAGGCAC	ENSMUST00000102822.2|Nrp2|ENSMUSG00000025969.9|neuropilin 2 	ENSMUST00000075144.5|Nrp2|ENSMUSG00000025969.9|neuropilin 2
mm10_v2_chr13_+_37826225_37826315	0.492013	AAGGCAC	ENSMUST00000128570.1|Rreb1|ENSMUSG00000039087.10|ras responsive element binding protein 1
mm10_v2_chr1_-_172057573_172057598	0.487051	AAGGCAC	ENSMUST00000059794.3|Nhlh1|ENSMUSG00000051251.3|nescient helix loop helix 1
mm10_v2_chr11_-_53980296_53980350	0.486178	AAGGCAC	ENSMUST00000076493.4|Slc22a21|ENSMUSG00000063652.4|solute carrier family 22 (organic cation transporter), member 21
mm10_v2_chr10_-_118868903_118868903	0.485115	AAGGCAC	ENSMUST00000004281.8|Dyrk2|ENSMUSG00000028630.8|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
mm10_v2_chr3_+_94954075_94954226	0.483887	AAGGCAC	ENSMUST00000107260.2|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000142311.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000137088.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000152869.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000107254.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression) 	ENSMUST00000107253.1|Rfx5|ENSMUSG00000005774.6|regulatory factor X, 5 (influences HLA class II expression)
mm10_v2_chr10_+_94514825_94514922	0.48323	AAGGCAC	ENSMUST00000065060.5|Tmcc3|ENSMUSG00000020023.11|transmembrane and coiled coil domains 3
mm10_v2_chr3_+_30602056_30602096	0.477474	AAGGCAC	ENSMUST00000047502.7|Mynn|ENSMUSG00000037730.8|myoneurin
mm10_v2_chr2_+_60209887_60210073	0.47436	AAGGCAC	ENSMUST00000102748.4|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7 	ENSMUST00000102747.1|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7
mm10_v2_chr8_-_11312731_11312826	0.473321	AAGGCAC	ENSMUST00000033898.9|Col4a1|ENSMUSG00000031502.9|collagen, type IV, alpha 1
mm10_v2_chr13_+_56702983_56703112	0.470989	AAGGCAC	ENSMUST00000069557.7|Smad5|ENSMUSG00000021540.10|SMAD family member 5 	ENSMUST00000109876.1|Smad5|ENSMUSG00000021540.10|SMAD family member 5
mm10_v2_chr3_-_19163011_19163085	0.470778	AAGGCAC	ENSMUST00000029125.8|Armc1|ENSMUSG00000027599.8|armadillo repeat containing 1
mm10_v2_chr18_-_9450097_9450161	0.47055	AAGGCAC	ENSMUST00000053917.4|Ccny|ENSMUSG00000024286.7|cyclin Y
mm10_v2_chr14_-_45658142_45658183	0.469915	AAGGCAC	ENSMUST00000111828.2|Ddhd1|ENSMUSG00000037697.12|DDHD domain containing 1 	ENSMUST00000051310.6|Ddhd1|ENSMUSG00000037697.12|DDHD domain containing 1
mm10_v2_chr13_-_74317234_74317326	0.469285	AAGGCAC	ENSMUST00000022060.5|Pdcd6|ENSMUSG00000021576.5|programmed cell death 6
mm10_v2_chr15_+_44428073_44428174	0.467541	AAGGCAC	ENSMUST00000060652.3|Eny2|ENSMUSG00000022338.6|enhancer of yellow 2 homolog (Drosophila)
mm10_v2_chr9_-_57552760_57552771	0.466063	AAGGCAC	ENSMUST00000034856.8|Mpi|ENSMUSG00000032306.8|mannose phosphate isomerase
mm10_v2_chr15_-_79403248_79403309	0.465843	AAGGCAC	ENSMUST00000074991.2|Tmem184b|ENSMUSG00000009035.7|transmembrane protein 184b
mm10_v2_chr7_-_110844350_110844457	0.463264	AAGGCAC	ENSMUST00000177462.1|Rnf141|ENSMUSG00000030788.9|ring finger protein 141 	ENSMUST00000176746.1|Rnf141|ENSMUSG00000030788.9|ring finger protein 141 	ENSMUST00000177236.1|Rnf141|ENSMUSG00000030788.9|ring finger protein 141
mm10_v2_chr3_+_156561792_156561869	0.463243	AAGGCAC	ENSMUST00000074015.4|Negr1|ENSMUSG00000040037.7|neuronal growth regulator 1
mm10_v2_chrX_+_56609843_56609864	0.462687	AAGGCAC	ENSMUST00000077741.5|Slc9a6|ENSMUSG00000060681.8|solute carrier family 9 (sodium/hydrogen exchanger), member 6 	ENSMUST00000114784.2|Slc9a6|ENSMUSG00000060681.8|solute carrier family 9 (sodium/hydrogen exchanger), member 6
mm10_v2_chrX_+_13280970_13281031	0.462566	AAGGCAC	ENSMUST00000000804.6|Ddx3x|ENSMUSG00000000787.6|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm10_v2_chr7_-_35754394_35754454	0.460994	AAGGCAC	ENSMUST00000051377.8|Dpy19l3|ENSMUSG00000043671.8|dpy-19-like 3 (C. elegans)
mm10_v2_chr10_-_120979327_120979373	0.458794	AAGGCAC	ENSMUST00000119944.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3 	ENSMUST00000119093.1|Lemd3|ENSMUSG00000048661.8|LEM domain containing 3
mm10_v2_chr14_+_60265189_60265215	0.458233	AAGGCAC	ENSMUST00000022563.7|Mtmr6|ENSMUSG00000021987.8|myotubularin related protein 6
mm10_v2_chrX_-_57503733_57503757	0.456392	AAGGCAC	ENSMUST00000057645.5|Gpr101|ENSMUSG00000036357.5|G protein-coupled receptor 101
mm10_v2_chr2_-_120609283_120609317	0.455496	AAGGCAC	ENSMUST00000102496.1|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57
mm10_v2_chr12_-_80112998_80113019	0.450203	AAGGCAC	ENSMUST00000165114.1|Zfp36l1|ENSMUSG00000021127.6|zinc finger protein 36, C3H type-like 1 	ENSMUST00000021552.1|Zfp36l1|ENSMUSG00000021127.6|zinc finger protein 36, C3H type-like 1
mm10_v2_chr11_-_70015346_70015435	0.448999	AAGGCAC	ENSMUST00000018718.7|Acadvl|ENSMUSG00000018574.8|acyl-Coenzyme A dehydrogenase, very long chain 	ENSMUST00000102574.3|Acadvl|ENSMUSG00000018574.8|acyl-Coenzyme A dehydrogenase, very long chain
mm10_v2_chrX_-_64276937_64277002	0.446612	AAGGCAC	ENSMUST00000114679.1|Slitrk4|ENSMUSG00000046699.8|SLIT and NTRK-like family, member 4 	ENSMUST00000069926.7|Slitrk4|ENSMUSG00000046699.8|SLIT and NTRK-like family, member 4
mm10_v2_chr2_+_152293828_152293861	0.442017	AAGGCAC	ENSMUST00000028963.7|Tbc1d20|ENSMUSG00000027465.7|TBC1 domain family, member 20 	ENSMUST00000144252.1|Tbc1d20|ENSMUSG00000027465.7|TBC1 domain family, member 20
mm10_v2_chr13_+_74121435_74121515	0.436827	AAGGCAC	ENSMUST00000036208.6|Slc9a3|ENSMUSG00000036123.6|solute carrier family 9 (sodium/hydrogen exchanger), member 3
mm10_v2_chr10_-_111010001_111010066	0.434901	AAGGCAC	ENSMUST00000099285.3|Zdhhc17|ENSMUSG00000035798.7|zinc finger, DHHC domain containing 17 	ENSMUST00000041723.7|Zdhhc17|ENSMUSG00000035798.7|zinc finger, DHHC domain containing 17
mm10_v2_chr5_+_114100308_114100369	0.43295	AAGGCAC	ENSMUST00000031588.7|Usp30|ENSMUSG00000029592.7|ubiquitin specific peptidase 30
mm10_v2_chr11_-_86683761_86683847	0.431929	AAGGCAC	ENSMUST00000018315.3|Vmp1|ENSMUSG00000018171.3|vacuole membrane protein 1
mm10_v2_chr4_-_59549314_59549364	0.430646	AAGGCAC	ENSMUST00000148331.2|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3 	ENSMUST00000030076.5|Ptbp3|ENSMUSG00000028382.9|polypyrimidine tract binding protein 3
mm10_v2_chr4_+_62286441_62286516	0.430447	AAGGCAC	ENSMUST00000084530.2|Slc31a2|ENSMUSG00000066152.5|solute carrier family 31, member 2
mm10_v2_chr16_+_35938470_35938489	0.429464	AAGGCAC	ENSMUST00000114878.1|Parp9|ENSMUSG00000022906.9|poly (ADP-ribose) polymerase family, member 9
mm10_v2_chr11_+_77216180_77216287	0.42835	AAGGCAC	ENSMUST00000037912.5|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila) 	ENSMUST00000156488.1|Ssh2|ENSMUSG00000037926.9|slingshot homolog 2 (Drosophila)
mm10_v2_chr8_-_81014866_81014942	0.422613	AAGGCAC	ENSMUST00000042724.6|Usp38|ENSMUSG00000038250.8|ubiquitin specific peptidase 38
mm10_v2_chr5_-_127617372_127617426	0.420485	AAGGCAC	ENSMUST00000031367.8|Slc15a4|ENSMUSG00000029416.11|solute carrier family 15, member 4
mm10_v2_chr17_-_29007925_29007962	0.420053	AAGGCAC	ENSMUST00000009138.5|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38 	ENSMUST00000119274.1|Stk38|ENSMUSG00000024006.10|serine/threonine kinase 38
mm10_v2_chr3_-_108911687_108911746	0.417422	AAGGCAC	ENSMUST00000029480.8|Prpf38b|ENSMUSG00000027881.8|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
mm10_v2_chr8_-_64205970_64206011	0.415808	AAGGCAC	ENSMUST00000066166.4|Tll1|ENSMUSG00000053626.4|tolloid-like
mm10_v2_chr16_+_33380765_33380787	0.415329	AAGGCAC	ENSMUST00000165418.1|Zfp148|ENSMUSG00000022811.10|zinc finger protein 148
mm10_v2_chr3_-_32365643_32365691	0.414687	AAGGCAC	ENSMUST00000029199.5|Zmat3|ENSMUSG00000027663.6|zinc finger matrin type 3
mm10_v2_chr1_-_98095596_98095648	0.413626	AAGGCAC	ENSMUST00000058762.8|Pam|ENSMUSG00000026335.10|peptidylglycine alpha-amidating monooxygenase 	ENSMUST00000097625.3|Pam|ENSMUSG00000026335.10|peptidylglycine alpha-amidating monooxygenase
mm10_v2_chr5_+_143403819_143403882	0.40912	AAGGCAC	ENSMUST00000110731.2|Kdelr2|ENSMUSG00000079111.2|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
mm10_v2_chr6_+_65042575_65042667	0.406782	AAGGCAC	ENSMUST00000031984.6|Smarcad1|ENSMUSG00000029920.7|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
mm10_v2_chr15_+_92051153_92051170	0.403752	AAGGCAC	ENSMUST00000169825.1|Cntn1|ENSMUSG00000055022.8|contactin 1
mm10_v2_chrX_-_43167817_43167838	0.403615	AAGGCAC	ENSMUST00000115058.1|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1 	ENSMUST00000115059.1|Tenm1|ENSMUSG00000016150.9|teneurin transmembrane protein 1
mm10_v2_chrY_-_1286563_1286615	0.401996	AAGGCAC	ENSMUST00000091190.5|Ddx3y|ENSMUSG00000069045.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
mm10_v2_chr17_+_30005029_30005098	0.398942	AAGGCAC	ENSMUST00000057897.7|Zfand3|ENSMUSG00000044477.10|zinc finger, AN1-type domain 3
mm10_v2_chr9_-_51008936_51009080	0.395166	AAGGCAC	ENSMUST00000176824.1|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2 	ENSMUST00000176663.1|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2 	ENSMUST00000041375.10|Sik2|ENSMUSG00000037112.10|salt inducible kinase 2
mm10_v2_chr11_+_55469677_55469716	0.392327	AAGGCAC	ENSMUST00000018727.3|G3bp1|ENSMUSG00000018583.5|GTPase activating protein (SH3 domain) binding protein 1
mm10_v2_chr12_+_30884321_30884326	0.391915	AAGGCAC	ENSMUST00000067087.6|Fam150b|ENSMUSG00000054204.6|family with sequence similarity 150, member B
mm10_v2_chr11_+_60777525_60777563	0.38728	AAGGCAC	ENSMUST00000056907.6|Smcr8|ENSMUSG00000049323.7|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human) 	ENSMUST00000102667.3|Smcr8|ENSMUSG00000049323.7|Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)
mm10_v2_chr17_-_26244203_26244228	0.386825	AAGGCAC	ENSMUST00000114988.1|Itfg3|ENSMUSG00000024187.8|integrin alpha FG-GAP repeat containing 3
mm10_v2_chr10_-_18743691_18743760	0.385325	AAGGCAC	ENSMUST00000019999.5|D10Bwg1379e|ENSMUSG00000019852.6|DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed
mm10_v2_chr10_+_110920170_110920188	0.384789	AAGGCAC	ENSMUST00000020403.5|Csrp2|ENSMUSG00000020186.6|cysteine and glycine-rich protein 2
mm10_v2_chr13_-_81710937_81711013	0.384173	AAGGCAC	ENSMUST00000161920.1|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G 	ENSMUST00000048993.5|Polr3g|ENSMUSG00000035834.5|polymerase (RNA) III (DNA directed) polypeptide G
mm10_v2_chr12_+_3426857_3426931	0.382411	AAGGCAC	ENSMUST00000111215.3|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000092003.5|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000144247.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila) 	ENSMUST00000153102.2|Asxl2|ENSMUSG00000037486.11|additional sex combs like 2 (Drosophila)
mm10_v2_chr5_-_121191365_121191400	0.381389	AAGGCAC	ENSMUST00000100770.2|Ptpn11|ENSMUSG00000043733.8|protein tyrosine phosphatase, non-receptor type 11 	ENSMUST00000054547.7|Ptpn11|ENSMUSG00000043733.8|protein tyrosine phosphatase, non-receptor type 11
mm10_v2_chr11_-_50431101_50431131	0.380312	AAGGCAC	ENSMUST00000020643.3|Rufy1|ENSMUSG00000020375.3|RUN and FYVE domain containing 1
mm10_v2_chr7_-_80688852_80688923	0.379278	AAGGCAC	ENSMUST00000122255.1|Crtc3|ENSMUSG00000030527.9|CREB regulated transcription coactivator 3
mm10_v2_chr2_-_144331695_144331695	0.37718	AAGGCAC	ENSMUST00000103171.3|Ovol2|ENSMUSG00000037279.7|ovo-like 2 (Drosophila)
mm10_v2_chr10_-_61452658_61452813	0.376597	AAGGCAC	ENSMUST00000167087.1|Eif4ebp2|ENSMUSG00000020091.8|eukaryotic translation initiation factor 4E binding protein 2 	ENSMUST00000020288.7|Eif4ebp2|ENSMUSG00000020091.8|eukaryotic translation initiation factor 4E binding protein 2
mm10_v2_chr4_-_21685782_21685805	0.376529	AAGGCAC	ENSMUST00000076206.4|Prdm13|ENSMUSG00000040478.8|PR domain containing 13
mm10_v2_chr2_-_72980402_72980471	0.375283	AAGGCAC	ENSMUST00000066003.6|Sp3|ENSMUSG00000027109.10|trans-acting transcription factor 3 	ENSMUST00000102689.3|Sp3|ENSMUSG00000027109.10|trans-acting transcription factor 3
mm10_v2_chr3_-_26133734_26133734	0.374928	AAGGCAC	ENSMUST00000108308.3|Nlgn1|ENSMUSG00000063887.7|neuroligin 1 	ENSMUST00000075054.4|Nlgn1|ENSMUSG00000063887.7|neuroligin 1
mm10_v2_chr19_-_10240689_10240751	0.373826	AAGGCAC	ENSMUST00000088013.5|Myrf|ENSMUSG00000036098.9|myelin regulatory factor
mm10_v2_chr5_+_124629050_124629097	0.372953	AAGGCAC	ENSMUST00000037865.8|Atp6v0a2|ENSMUSG00000038023.8|ATPase, H+ transporting, lysosomal V0 subunit A2
mm10_v2_chrX_-_108834303_108834381	0.370201	AAGGCAC	ENSMUST00000101283.3|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3 	ENSMUST00000150434.1|Brwd3|ENSMUSG00000063663.5|bromodomain and WD repeat domain containing 3
mm10_v2_chr2_+_113327711_113327753	0.36676	AAGGCAC	ENSMUST00000099576.2|Fmn1|ENSMUSG00000044042.12|formin 1
mm10_v2_chr5_-_138155694_138155744	0.366514	AAGGCAC	ENSMUST00000132318.1|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113 	ENSMUST00000049393.8|Zfp113|ENSMUSG00000037007.11|zinc finger protein 113
mm10_v2_chr1_-_16619437_16619489	0.366072	AAGGCAC	ENSMUST00000117146.1|Ube2w|ENSMUSG00000025939.11|ubiquitin-conjugating enzyme E2W (putative)
mm10_v2_chr10_+_77581720_77581741	0.363666	AAGGCAC	ENSMUST00000009435.5|Pttg1ip|ENSMUSG00000009291.6|pituitary tumor-transforming 1 interacting protein
mm10_v2_chr3_+_100162381_100162536	0.362275	AAGGCAC	ENSMUST00000029459.3|Gdap2|ENSMUSG00000027865.4|ganglioside-induced differentiation-associated-protein 2 	ENSMUST00000106997.1|Gdap2|ENSMUSG00000027865.4|ganglioside-induced differentiation-associated-protein 2
mm10_v2_chr16_+_33185045_33185153	0.361679	AAGGCAC	ENSMUST00000039733.8|Osbpl11|ENSMUSG00000022807.8|oxysterol binding protein-like 11
mm10_v2_chr16_+_16896469_16896598	0.357948	AAGGCAC	ENSMUST00000027373.9|Ppm1f|ENSMUSG00000026181.11|protein phosphatase 1F (PP2C domain containing)
mm10_v2_chr4_-_53159885_53159900	0.357918	AAGGCAC	ENSMUST00000030010.3|Abca1|ENSMUSG00000015243.4|ATP-binding cassette, sub-family A (ABC1), member 1
mm10_v2_chr11_-_75454656_75454721	0.356231	AAGGCAC	ENSMUST00000173320.1|Wdr81|ENSMUSG00000045374.12|WD repeat domain 81
mm10_v2_chr2_+_71786923_71786978	0.356137	AAGGCAC	ENSMUST00000112101.1|Itga6|ENSMUSG00000027111.9|integrin alpha 6 	ENSMUST00000028522.3|Itga6|ENSMUSG00000027111.9|integrin alpha 6
mm10_v2_chr11_-_120437656_120437731	0.349912	AAGGCAC	ENSMUST00000044271.8|Nploc4|ENSMUSG00000039703.9|nuclear protein localization 4 homolog (S. cerevisiae) 	ENSMUST00000103017.3|Nploc4|ENSMUSG00000039703.9|nuclear protein localization 4 homolog (S. cerevisiae)
mm10_v2_chr9_-_75611308_75611334	0.348608	AAGGCAC	ENSMUST00000064433.3|Tmod2|ENSMUSG00000032186.8|tropomodulin 2
mm10_v2_chr2_+_181497165_181497216	0.345616	AAGGCAC	ENSMUST00000149163.1|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000000844.8|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000184849.1|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000108800.1|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2 	ENSMUST00000069712.2|Tpd52l2|ENSMUSG00000000827.12|tumor protein D52-like 2
mm10_v2_chr12_-_16589743_16589826	0.343621	AAGGCAC	ENSMUST00000111067.2|Lpin1|ENSMUSG00000020593.8|lipin 1 	ENSMUST00000067124.5|Lpin1|ENSMUSG00000020593.8|lipin 1
mm10_v2_chr19_+_41582370_41582370	0.341923	AAGGCAC	ENSMUST00000172371.1|Gm340|ENSMUSG00000090673.1|predicted gene 340
mm10_v2_chr19_-_12501996_12502152	0.340903	AAGGCAC	ENSMUST00000045521.7|Dtx4|ENSMUSG00000039982.7|deltex 4 homolog (Drosophila)
mm10_v2_chr4_+_139574697_139574725	0.340651	AAGGCAC	ENSMUST00000174078.1|Iffo2|ENSMUSG00000041025.9|intermediate filament family orphan 2
mm10_v2_chr14_+_46882854_46882973	0.340618	AAGGCAC	ENSMUST00000022386.8|Samd4|ENSMUSG00000021838.10|sterile alpha motif domain containing 4 	ENSMUST00000100672.3|Samd4|ENSMUSG00000021838.10|sterile alpha motif domain containing 4
mm10_v2_chr16_+_58670208_58670246	0.338901	AAGGCAC	ENSMUST00000060077.5|Cpox|ENSMUSG00000022742.5|coproporphyrinogen oxidase
mm10_v2_chr6_+_40110251_40110251	0.338847	AAGGCAC	ENSMUST00000061740.7|Tmem178b|ENSMUSG00000057716.6|transmembrane protein 178B
mm10_v2_chr8_+_105170668_105170686	0.337028	AAGGCAC	ENSMUST00000109395.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000109394.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000052209.2|Cbfb|ENSMUSG00000031885.7|core binding factor beta 	ENSMUST00000109392.1|Cbfb|ENSMUSG00000031885.7|core binding factor beta
mm10_v2_chr2_-_17731035_17731087	0.336432	AAGGCAC	ENSMUST00000028080.5|Nebl|ENSMUSG00000053702.10|nebulette
mm10_v2_chr5_+_64160207_64160220	0.336236	AAGGCAC	ENSMUST00000101195.2|Tbc1d1|ENSMUSG00000029174.12|TBC1 domain family, member 1
mm10_v2_chr13_+_54621780_54621793	0.333245	AAGGCAC	ENSMUST00000126071.1|Faf2|ENSMUSG00000025873.9|Fas associated factor family member 2
mm10_v2_chr14_+_30825580_30825640	0.330359	AAGGCAC	ENSMUST00000006701.5|Tmem110|ENSMUSG00000006526.5|transmembrane protein 110
mm10_v2_chr4_-_109476666_109476727	0.329877	AAGGCAC	ENSMUST00000030284.3|Rnf11|ENSMUSG00000028557.4|ring finger protein 11
mm10_v2_chr2_-_84650714_84650749	0.327132	AAGGCAC	ENSMUST00000111697.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111670.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111696.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111678.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111690.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111695.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111677.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111698.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000099941.2|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111676.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111694.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111675.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111689.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111687.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111692.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111685.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111686.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111688.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111693.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1 	ENSMUST00000111684.1|Ctnnd1|ENSMUSG00000034101.8|catenin (cadherin associated protein), delta 1
mm10_v2_chr12_-_69681795_69681869	0.315894	AAGGCAC	ENSMUST00000183277.1|Sos2|ENSMUSG00000034801.7|son of sevenless homolog 2 (Drosophila) 	ENSMUST00000035773.7|Sos2|ENSMUSG00000034801.7|son of sevenless homolog 2 (Drosophila)
mm10_v2_chr16_+_92058270_92058328	0.314741	AAGGCAC	ENSMUST00000047429.8|Mrps6|ENSMUSG00000039680.9|mitochondrial ribosomal protein S6 	ENSMUST00000113975.2|Slc5a3|ENSMUSG00000089774.2|solute carrier family 5 (inositol transporters), member 3
mm10_v2_chr19_-_24225015_24225033	0.313536	AAGGCAC	ENSMUST00000099558.4|Tjp2|ENSMUSG00000024812.9|tight junction protein 2
mm10_v2_chr5_-_30155101_30155162	0.313385	AAGGCAC	ENSMUST00000156859.1|Hadha|ENSMUSG00000025745.5|hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit
mm10_v2_chr4_-_82505749_82505802	0.312656	AAGGCAC	ENSMUST00000107245.2|Nfib|ENSMUSG00000008575.11|nuclear factor I/B 	ENSMUST00000107246.1|Nfib|ENSMUSG00000008575.11|nuclear factor I/B
mm10_v2_chr18_-_73703739_73703806	0.312391	AAGGCAC	ENSMUST00000025393.7|Smad4|ENSMUSG00000024515.7|SMAD family member 4
mm10_v2_chr10_+_81268172_81268205	0.312156	AAGGCAC	ENSMUST00000057798.8|Apba3|ENSMUSG00000004931.10|amyloid beta (A4) precursor protein-binding, family A, member 3
mm10_v2_chr10_+_127739516_127739592	0.31099	AAGGCAC	ENSMUST00000054287.7|Zbtb39|ENSMUSG00000044617.7|zinc finger and BTB domain containing 39
mm10_v2_chr19_+_38395980_38396022	0.310131	AAGGCAC	ENSMUST00000054098.2|Slc35g1|ENSMUSG00000044026.2|solute carrier family 35, member G1
mm10_v2_chr6_-_6217023_6217125	0.307056	AAGGCAC	ENSMUST00000015256.8|Slc25a13|ENSMUSG00000015112.9|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
mm10_v2_chrX_+_23693043_23693131	0.306845	AAGGCAC	ENSMUST00000035766.6|Wdr44|ENSMUSG00000036769.8|WD repeat domain 44 	ENSMUST00000101670.2|Wdr44|ENSMUSG00000036769.8|WD repeat domain 44
mm10_v2_chr4_+_137594140_137594274	0.306817	AAGGCAC	ENSMUST00000105840.1|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48 	ENSMUST00000055131.6|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48 	ENSMUST00000105839.1|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48 	ENSMUST00000105838.1|Usp48|ENSMUSG00000043411.9|ubiquitin specific peptidase 48
mm10_v2_chr17_+_28691342_28691399	0.30497	AAGGCAC	ENSMUST00000114758.1|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000004990.6|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000062694.8|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14 	ENSMUST00000114754.1|Mapk14|ENSMUSG00000053436.8|mitogen-activated protein kinase 14
mm10_v2_chr9_-_119322421_119322449	0.303726	AAGGCAC	ENSMUST00000040853.4|Oxsr1|ENSMUSG00000036737.6|oxidative-stress responsive 1
mm10_v2_chr13_+_31558157_31558176	0.298032	AAGGCAC	ENSMUST00000042118.8|Foxq1|ENSMUSG00000038415.8|forkhead box Q1
mm10_v2_chr1_+_125561010_125561095	0.297624	AAGGCAC	ENSMUST00000027580.4|Slc35f5|ENSMUSG00000026342.4|solute carrier family 35, member F5
mm10_v2_chr14_-_20480106_20480133	0.297622	AAGGCAC	ENSMUST00000065504.9|Anxa7|ENSMUSG00000021814.10|annexin A7 	ENSMUST00000100844.4|Anxa7|ENSMUSG00000021814.10|annexin A7
mm10_v2_chr5_+_141241490_141241542	0.296654	AAGGCAC	ENSMUST00000085774.4|Sdk1|ENSMUSG00000039683.10|sidekick homolog 1 (chicken)
mm10_v2_chr2_+_113441064_113441079	0.294186	AAGGCAC	ENSMUST00000081349.6|Fmn1|ENSMUSG00000044042.12|formin 1
mm10_v2_chr9_+_59750876_59750918	0.288997	AAGGCAC	ENSMUST00000136740.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000135298.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000128341.1|Myo9a|ENSMUSG00000039585.9|myosin IXa
mm10_v2_chr1_-_79761752_79761774	0.288422	AAGGCAC	ENSMUST00000113512.1|Wdfy1|ENSMUSG00000073643.5|WD repeat and FYVE domain containing 1 	ENSMUST00000113513.1|Wdfy1|ENSMUSG00000073643.5|WD repeat and FYVE domain containing 1 	ENSMUST00000113515.1|Wdfy1|ENSMUSG00000073643.5|WD repeat and FYVE domain containing 1 	ENSMUST00000113514.1|Wdfy1|ENSMUSG00000073643.5|WD repeat and FYVE domain containing 1 	ENSMUST00000113510.1|Wdfy1|ENSMUSG00000073643.5|WD repeat and FYVE domain containing 1 	ENSMUST00000113511.1|Wdfy1|ENSMUSG00000073643.5|WD repeat and FYVE domain containing 1 	ENSMUST00000048820.7|Wdfy1|ENSMUSG00000073643.5|WD repeat and FYVE domain containing 1
mm10_v2_chr10_+_67537861_67537930	0.287317	AAGGCAC	ENSMUST00000048289.7|Egr2|ENSMUSG00000037868.9|early growth response 2 	ENSMUST00000105438.2|Egr2|ENSMUSG00000037868.9|early growth response 2 	ENSMUST00000130933.1|Egr2|ENSMUSG00000037868.9|early growth response 2 	ENSMUST00000146986.1|Egr2|ENSMUSG00000037868.9|early growth response 2
mm10_v2_chr11_-_86544754_86544805	0.284809	AAGGCAC	ENSMUST00000138810.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000058286.2|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1 	ENSMUST00000154617.1|Rps6kb1|ENSMUSG00000020516.9|ribosomal protein S6 kinase, polypeptide 1
mm10_v2_chr14_-_64949838_64949886	0.282396	AAGGCAC	ENSMUST00000067843.3|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176489.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175905.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000022544.7|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000175744.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1 	ENSMUST00000176128.1|Hmbox1|ENSMUSG00000021972.8|homeobox containing 1
mm10_v2_chr4_+_101419277_101419332	0.278518	AAGGCAC	ENSMUST00000102780.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106946.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106945.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4
mm10_v2_chr1_+_118627943_118627951	0.276008	AAGGCAC	ENSMUST00000027629.8|Tfcp2l1|ENSMUSG00000026380.9|transcription factor CP2-like 1
mm10_v2_chr11_+_103966716_103966871	0.27319	AAGGCAC	ENSMUST00000057921.3|Arf2|ENSMUSG00000062421.7|ADP-ribosylation factor 2 	ENSMUST00000063347.5|Arf2|ENSMUSG00000062421.7|ADP-ribosylation factor 2
mm10_v2_chrX_+_56346390_56346415	0.273001	AAGGCAC	ENSMUST00000101560.3|Zfp449|ENSMUSG00000073176.4|zinc finger protein 449
mm10_v2_chr12_-_75596195_75596261	0.272796	AAGGCAC	ENSMUST00000021447.7|Ppp2r5e|ENSMUSG00000021051.9|protein phosphatase 2, regulatory subunit B (B56), epsilon isoform
mm10_v2_chr14_+_60634719_60634776	0.272402	AAGGCAC	ENSMUST00000022566.7|Spata13|ENSMUSG00000021990.9|spermatogenesis associated 13 	ENSMUST00000159729.1|Spata13|ENSMUSG00000021990.9|spermatogenesis associated 13
mm10_v2_chr6_-_137649211_137649294	0.269808	AAGGCAC	ENSMUST00000134630.1|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8 	ENSMUST00000058210.6|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8 	ENSMUST00000111878.1|Eps8|ENSMUSG00000015766.8|epidermal growth factor receptor pathway substrate 8
mm10_v2_chr2_+_140395309_140395438	0.267322	AAGGCAC	ENSMUST00000110067.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110064.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110063.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000110062.1|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000078027.5|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2 	ENSMUST00000043836.7|Macrod2|ENSMUSG00000068205.8|MACRO domain containing 2
mm10_v2_chr11_+_53770014_53770057	0.263773	AAGGCAC	ENSMUST00000108920.2|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1 	ENSMUST00000140866.1|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1 	ENSMUST00000108922.1|Irf1|ENSMUSG00000018899.10|interferon regulatory factor 1
mm10_v2_chr11_-_82890541_82890626	0.262836	AAGGCAC	ENSMUST00000092844.6|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D 	ENSMUST00000021033.9|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D 	ENSMUST00000018985.8|Rad51d|ENSMUSG00000018841.11|RAD51 homolog D
mm10_v2_chr6_-_87811771_87811802	0.262056	AAGGCAC	ENSMUST00000078647.4|Rab43|ENSMUSG00000030055.10|RAB43, member RAS oncogene family 	ENSMUST00000032135.5|Rab43|ENSMUSG00000030055.10|RAB43, member RAS oncogene family
mm10_v2_chr7_+_27591513_27591562	0.259038	AAGGCAC	ENSMUST00000108344.2|Akt2|ENSMUSG00000004056.9|thymoma viral proto-oncogene 2
mm10_v2_chr4_-_34882919_34882964	0.258949	AAGGCAC	ENSMUST00000098163.2|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292 	ENSMUST00000047950.5|Zfp292|ENSMUSG00000039967.8|zinc finger protein 292
mm10_v2_chr15_-_77842133_77842175	0.258597	AAGGCAC	ENSMUST00000016771.6|Myh9|ENSMUSG00000022443.10|myosin, heavy polypeptide 9, non-muscle
mm10_v2_chr10_+_99263224_99263240	0.257942	AAGGCAC	ENSMUST00000020118.4|Dusp6|ENSMUSG00000019960.7|dual specificity phosphatase 6
mm10_v2_chr2_-_104494400_104494463	0.257581	AAGGCAC	ENSMUST00000028600.7|Hipk3|ENSMUSG00000027177.8|homeodomain interacting protein kinase 3
mm10_v2_chr12_-_51691883_51691925	0.257134	AAGGCAC	ENSMUST00000013130.8|Strn3|ENSMUSG00000020954.9|striatin, calmodulin binding protein 3 	ENSMUST00000169503.1|Strn3|ENSMUSG00000020954.9|striatin, calmodulin binding protein 3
mm10_v2_chr5_-_69592311_69592337	0.256967	AAGGCAC	ENSMUST00000031117.6|Gnpda2|ENSMUSG00000029209.9|glucosamine-6-phosphate deaminase 2
mm10_v2_chrX_+_99136119_99136138	0.25448	AAGGCAC	ENSMUST00000052839.6|Efnb1|ENSMUSG00000031217.8|ephrin B1
mm10_v2_chr8_+_109778554_109778558	0.25235	AAGGCAC	ENSMUST00000093157.6|Ap1g1|ENSMUSG00000031731.10|adaptor protein complex AP-1, gamma 1 subunit
mm10_v2_chr2_+_178118975_178119158	0.250805	AAGGCAC	ENSMUST00000108917.1|Phactr3|ENSMUSG00000027525.11|phosphatase and actin regulator 3
mm10_v2_chr2_+_173659760_173659816	0.249599	AAGGCAC	ENSMUST00000029024.3|Rab22a|ENSMUSG00000027519.4|RAB22A, member RAS oncogene family
mm10_v2_chr9_+_13827708_13827781	0.246917	AAGGCAC	ENSMUST00000059579.5|Fam76b|ENSMUSG00000037808.6|family with sequence similarity 76, member B
mm10_v2_chr16_-_18235074_18235184	0.2464	AAGGCAC	ENSMUST00000076957.5|Zdhhc8|ENSMUSG00000060166.5|zinc finger, DHHC domain containing 8
mm10_v2_chr6_-_37442095_37442154	0.242138	AAGGCAC	ENSMUST00000041093.5|Creb3l2|ENSMUSG00000038648.5|cAMP responsive element binding protein 3-like 2
mm10_v2_chr3_-_46447939_46447980	0.240361	AAGGCAC	ENSMUST00000166505.1|Pabpc4l|ENSMUSG00000090919.1|poly(A) binding protein, cytoplasmic 4-like
mm10_v2_chr8_+_79639618_79639730	0.24026	AAGGCAC	ENSMUST00000173078.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4 	ENSMUST00000173286.1|Otud4|ENSMUSG00000036990.7|OTU domain containing 4
mm10_v2_chrX_+_66649318_66649394	0.235922	AAGGCAC	ENSMUST00000166241.1|Slitrk2|ENSMUSG00000036790.5|SLIT and NTRK-like family, member 2
mm10_v2_chr2_+_73271925_73271939	0.235544	AAGGCAC	ENSMUST00000090813.5|Sp9|ENSMUSG00000068859.5|trans-acting transcription factor 9
mm10_v2_chr18_-_80713062_80713080	0.234371	AAGGCAC	ENSMUST00000170905.1|Nfatc1|ENSMUSG00000033016.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 	ENSMUST00000078049.4|Nfatc1|ENSMUSG00000033016.9|nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
mm10_v2_chr11_-_73199013_73199056	0.233602	AAGGCAC	ENSMUST00000006103.2|Ctns|ENSMUSG00000005949.3|cystinosis, nephropathic 	ENSMUST00000108476.1|Ctns|ENSMUSG00000005949.3|cystinosis, nephropathic
mm10_v2_chr9_-_117252450_117252489	0.231808	AAGGCAC	ENSMUST00000111773.3|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein 	ENSMUST00000068962.7|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein 	ENSMUST00000044901.7|Rbms3|ENSMUSG00000039607.9|RNA binding motif, single stranded interacting protein
mm10_v2_chr14_-_12823031_12823133	0.229831	AAGGCAC	ENSMUST00000067491.6|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000177814.1|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000112658.1|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator 	ENSMUST00000112657.2|Cadps|ENSMUSG00000054423.7|Ca2+-dependent secretion activator
mm10_v2_chr17_+_86963077_86963094	0.228771	AAGGCAC	ENSMUST00000024956.8|Rhoq|ENSMUSG00000024143.8|ras homolog gene family, member Q
mm10_v2_chr9_+_57537518_57537577	0.228054	AAGGCAC	ENSMUST00000114200.2|Fam219b|ENSMUSG00000032305.8|family with sequence similarity 219, member B 	ENSMUST00000093833.4|Fam219b|ENSMUSG00000032305.8|family with sequence similarity 219, member B
mm10_v2_chr5_-_32854185_32854256	0.227571	AAGGCAC	ENSMUST00000130134.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like 	ENSMUST00000120129.2|Prr14l|ENSMUSG00000054280.8|proline rich 14-like
mm10_v2_chr2_-_130840091_130840150	0.227189	AAGGCAC	ENSMUST00000044766.8|4930402H24Rik|ENSMUSG00000027309.12|RIKEN cDNA 4930402H24 gene 	ENSMUST00000138990.1|4930402H24Rik|ENSMUSG00000027309.12|RIKEN cDNA 4930402H24 gene 	ENSMUST00000120316.1|4930402H24Rik|ENSMUSG00000027309.12|RIKEN cDNA 4930402H24 gene 	ENSMUST00000110243.1|4930402H24Rik|ENSMUSG00000027309.12|RIKEN cDNA 4930402H24 gene
mm10_v2_chr1_+_5588493_5588557	0.22615	AAGGCAC	ENSMUST00000160777.1|Oprk1|ENSMUSG00000025905.7|opioid receptor, kappa 1 	ENSMUST00000027038.4|Oprk1|ENSMUSG00000025905.7|opioid receptor, kappa 1
mm10_v2_chr11_-_5381734_5381745	0.223815	AAGGCAC	ENSMUST00000172492.1|Znrf3|ENSMUSG00000041961.8|zinc and ring finger 3
mm10_v2_chr1_-_155972887_155972890	0.220316	AAGGCAC	ENSMUST00000138762.1|Cep350|ENSMUSG00000033671.11|centrosomal protein 350 	ENSMUST00000124495.1|Cep350|ENSMUSG00000033671.11|centrosomal protein 350
mm10_v2_chr17_+_45563928_45563973	0.220024	AAGGCAC	ENSMUST00000041353.6|Slc35b2|ENSMUSG00000037089.9|solute carrier family 35, member B2
mm10_v2_chr3_-_105801323_105801377	0.214218	AAGGCAC	ENSMUST00000090678.6|Rap1a|ENSMUSG00000068798.6|RAS-related protein-1a
mm10_v2_chr11_+_117199641_117199663	0.213373	AAGGCAC	ENSMUST00000093907.4|Sept9|ENSMUSG00000059248.7|septin 9
mm10_v2_chr1_-_64737735_64737756	0.208952	AAGGCAC	ENSMUST00000063982.5|Fzd5|ENSMUSG00000045005.8|frizzled homolog 5 (Drosophila) 	ENSMUST00000116133.2|Fzd5|ENSMUSG00000045005.8|frizzled homolog 5 (Drosophila)
mm10_v2_chr12_-_98259416_98259459	0.208454	AAGGCAC	ENSMUST00000021390.7|Galc|ENSMUSG00000021003.9|galactosylceramidase
mm10_v2_chr13_-_119790805_119790805	0.205389	AAGGCAC	ENSMUST00000178271.1|Zfp131|ENSMUSG00000094870.1|zinc finger protein 131 	ENSMUST00000177916.1|Zfp131|ENSMUSG00000094870.1|zinc finger protein 131
mm10_v2_chr10_+_70097102_70097211	0.201537	AAGGCAC	ENSMUST00000147545.1|Ccdc6|ENSMUSG00000048701.7|coiled-coil domain containing 6
mm10_v2_chr6_-_97617536_97617597	0.200824	AAGGCAC	ENSMUST00000113355.2|Frmd4b|ENSMUSG00000030064.10|FERM domain containing 4B
mm10_v2_chr13_+_109903089_109903110	0.200501	AAGGCAC	ENSMUST00000120664.1|Pde4d|ENSMUSG00000021699.11|phosphodiesterase 4D, cAMP specific
mm10_v2_chr12_+_4917376_4917438	0.19955	AAGGCAC	ENSMUST00000045664.5|Atad2b|ENSMUSG00000052812.4|ATPase family, AAA domain containing 2B
mm10_v2_chr1_+_181150926_181150984	0.1954	AAGGCAC	ENSMUST00000134115.1|Cnih4|ENSMUSG00000062169.7|cornichon homolog 4 (Drosophila) 	ENSMUST00000111059.1|Cnih4|ENSMUSG00000062169.7|cornichon homolog 4 (Drosophila)
mm10_v2_chr17_+_25188380_25188418	0.194984	AAGGCAC	ENSMUST00000039734.5|Unkl|ENSMUSG00000015127.8|unkempt-like (Drosophila)
mm10_v2_chr12_-_31499541_31499616	0.191003	AAGGCAC	ENSMUST00000101499.3|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000064240.6|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1 	ENSMUST00000085487.5|Cbll1|ENSMUSG00000020659.9|Casitas B-lineage lymphoma-like 1
mm10_v2_chrX_+_137049586_137049654	0.187726	AAGGCAC	ENSMUST00000047852.7|Fam199x|ENSMUSG00000042595.7|family with sequence similarity 199, X-linked
mm10_v2_chr14_-_57890242_57890320	0.187674	AAGGCAC	ENSMUST00000089473.3|Zdhhc20|ENSMUSG00000021969.7|zinc finger, DHHC domain containing 20
mm10_v2_chr13_-_21402688_21402755	0.187436	AAGGCAC	ENSMUST00000117721.1|Zkscan3|ENSMUSG00000021327.12|zinc finger with KRAB and SCAN domains 3 	ENSMUST00000070785.8|Zkscan3|ENSMUSG00000021327.12|zinc finger with KRAB and SCAN domains 3 	ENSMUST00000116433.1|Zkscan3|ENSMUSG00000021327.12|zinc finger with KRAB and SCAN domains 3 	ENSMUST00000116434.3|Zkscan3|ENSMUSG00000021327.12|zinc finger with KRAB and SCAN domains 3
mm10_v2_chrX_+_52912232_52912361	0.185348	AAGGCAC	ENSMUST00000078944.6|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000101587.3|Phf6|ENSMUSG00000025626.10|PHD finger protein 6 	ENSMUST00000154864.2|Phf6|ENSMUSG00000025626.10|PHD finger protein 6
mm10_v2_chr11_-_121204626_121204717	0.18275	AAGGCAC	ENSMUST00000026169.6|Ogfod3|ENSMUSG00000025169.6|2-oxoglutarate and iron-dependent oxygenase domain containing 3
mm10_v2_chr1_-_182341585_182341625	0.182378	AAGGCAC	ENSMUST00000051431.4|Fbxo28|ENSMUSG00000047539.4|F-box protein 28
mm10_v2_chr1_+_180568913_180568960	0.181101	AAGGCAC	ENSMUST00000027777.6|Parp1|ENSMUSG00000026496.6|poly (ADP-ribose) polymerase family, member 1
mm10_v2_chr14_-_26669835_26669883	0.18096	AAGGCAC	ENSMUST00000052932.9|Pde12|ENSMUSG00000043702.9|phosphodiesterase 12
mm10_v2_chr5_-_21055880_21055961	0.179001	AAGGCAC	ENSMUST00000030556.7|Ptpn12|ENSMUSG00000028771.7|protein tyrosine phosphatase, non-receptor type 12
mm10_v2_chr9_+_118926453_118926568	0.178545	AAGGCAC	ENSMUST00000073109.5|Ctdspl|ENSMUSG00000047409.7|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
mm10_v2_chr4_+_99929414_99929438	0.174785	AAGGCAC	ENSMUST00000058351.9|Pgm2|ENSMUSG00000025791.12|phosphoglucomutase 2
mm10_v2_chr18_-_47368830_47368878	0.174746	AAGGCAC	ENSMUST00000019791.7|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000115449.2|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr5_+_96373955_96373955	0.174122	AAGGCAC	ENSMUST00000036019.4|Fras1|ENSMUSG00000034687.4|Fraser syndrome 1 homolog (human)
mm10_v2_chr4_-_41713491_41713534	0.170703	AAGGCAC	ENSMUST00000038434.3|Rpp25l|ENSMUSG00000036114.3|ribonuclease P/MRP 25 subunit-like
mm10_v2_chr3_+_76074270_76074270	0.167854	AAGGCAC	ENSMUST00000038364.8|Fstl5|ENSMUSG00000034098.8|follistatin-like 5
mm10_v2_chr3_+_14578609_14578687	0.165458	AAGGCAC	ENSMUST00000029069.6|E2f5|ENSMUSG00000027552.8|E2F transcription factor 5 	ENSMUST00000165922.2|E2f5|ENSMUSG00000027552.8|E2F transcription factor 5
mm10_v2_chr16_-_92466081_92466187	0.164926	AAGGCAC	ENSMUST00000060005.8|Rcan1|ENSMUSG00000022951.9|regulator of calcineurin 1
mm10_v2_chr11_-_102230091_102230124	0.162926	AAGGCAC	ENSMUST00000008999.5|Hdac5|ENSMUSG00000008855.11|histone deacetylase 5
mm10_v2_chr14_-_78308031_78308050	0.162505	AAGGCAC	ENSMUST00000022592.7|Tnfsf11|ENSMUSG00000022015.8|tumor necrosis factor (ligand) superfamily, member 11
mm10_v2_chr10_+_29211637_29211649	0.162075	AAGGCAC	ENSMUST00000092627.4|9330159F19Rik|ENSMUSG00000004360.8|RIKEN cDNA 9330159F19 gene
mm10_v2_chr17_+_24632671_24632712	0.162049	AAGGCAC	ENSMUST00000047611.2|Nthl1|ENSMUSG00000041429.2|nth (endonuclease III)-like 1 (E.coli)
mm10_v2_chr1_-_182517447_182517525	0.162012	AAGGCAC	ENSMUST00000068505.8|Capn2|ENSMUSG00000026509.10|calpain 2
mm10_v2_chr10_+_59879556_59879613	0.161496	AAGGCAC	ENSMUST00000147914.1|Dnajb12|ENSMUSG00000020109.7|DnaJ (Hsp40) homolog, subfamily B, member 12 	ENSMUST00000146590.1|Dnajb12|ENSMUSG00000020109.7|DnaJ (Hsp40) homolog, subfamily B, member 12
mm10_v2_chr16_+_94370618_94370784	0.156407	AAGGCAC	ENSMUST00000117648.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000147352.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150346.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000155692.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000153988.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000141856.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000152117.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000150097.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000122895.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3 	ENSMUST00000151770.1|Ttc3|ENSMUSG00000040785.11|tetratricopeptide repeat domain 3
mm10_v2_chrX_+_166238901_166238914	0.155453	AAGGCAC	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr5_-_69341699_69341714	0.154868	AAGGCAC	ENSMUST00000054095.4|Kctd8|ENSMUSG00000037653.6|potassium channel tetramerisation domain containing 8
mm10_v2_chr2_+_52857844_52857868	0.15476	AAGGCAC	ENSMUST00000090952.4|Fmnl2|ENSMUSG00000036053.10|formin-like 2 	ENSMUST00000049483.6|Fmnl2|ENSMUSG00000036053.10|formin-like 2 	ENSMUST00000050719.6|Fmnl2|ENSMUSG00000036053.10|formin-like 2
mm10_v2_chr1_-_165934900_165935036	0.152497	AAGGCAC	ENSMUST00000069609.5|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111427.2|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1 	ENSMUST00000111426.4|Pou2f1|ENSMUSG00000026565.12|POU domain, class 2, transcription factor 1
mm10_v2_chr11_+_80183851_80183882	0.151701	AAGGCAC	ENSMUST00000017839.2|Rnf135|ENSMUSG00000020707.6|ring finger protein 135
mm10_v2_chr19_+_5637475_5637486	0.150054	AAGGCAC	ENSMUST00000025867.5|Rela|ENSMUSG00000024927.7|v-rel reticuloendotheliosis viral oncogene homolog A (avian)
mm10_v2_chr17_-_10319324_10319380	0.149431	AAGGCAC	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr2_-_113217051_113217094	0.147727	AAGGCAC	ENSMUST00000080673.5|Ryr3|ENSMUSG00000057378.8|ryanodine receptor 3
mm10_v2_chrX_-_37110257_37110346	0.145685	AAGGCAC	ENSMUST00000076265.6|Upf3b|ENSMUSG00000036572.10|UPF3 regulator of nonsense transcripts homolog B (yeast)
mm10_v2_chr15_+_101266839_101266859	0.142362	AAGGCAC	ENSMUST00000023779.6|Nr4a1|ENSMUSG00000023034.6|nuclear receptor subfamily 4, group A, member 1
mm10_v2_chr14_+_121035538_121035575	0.139626	AAGGCAC	ENSMUST00000026635.7|Farp1|ENSMUSG00000025555.8|FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
mm10_v2_chr8_-_106337987_106337996	0.138008	AAGGCAC	ENSMUST00000067512.7|Smpd3|ENSMUSG00000031906.8|sphingomyelin phosphodiesterase 3, neutral
mm10_v2_chr3_-_73056943_73056943	0.137961	AAGGCAC	ENSMUST00000059407.7|Slitrk3|ENSMUSG00000048304.7|SLIT and NTRK-like family, member 3
mm10_v2_chr10_-_79984227_79984330	0.136024	AAGGCAC	ENSMUST00000052885.7|Tmem259|ENSMUSG00000013858.8|transmembrane protein 259
mm10_v2_chr8_-_86885222_86885282	0.134466	AAGGCAC	ENSMUST00000034074.7|N4bp1|ENSMUSG00000031652.10|NEDD4 binding protein 1
mm10_v2_chr8_+_62951361_62951498	0.131907	AAGGCAC	ENSMUST00000119068.1|Spock3|ENSMUSG00000054162.9|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
mm10_v2_chr1_-_9299238_9299306	0.129237	AAGGCAC	ENSMUST00000140295.1|Sntg1|ENSMUSG00000025909.10|syntrophin, gamma 1
mm10_v2_chr10_-_75517324_75517381	0.128181	AAGGCAC	ENSMUST00000039796.7|Gucd1|ENSMUSG00000033416.8|guanylyl cyclase domain containing 1
mm10_v2_chr7_-_127014585_127014621	0.125431	AAGGCAC	ENSMUST00000165096.2|Mvp|ENSMUSG00000030681.12|major vault protein
mm10_v2_chr4_-_132922547_132922563	0.125257	AAGGCAC	ENSMUST00000030696.4|Fam76a|ENSMUSG00000028878.5|family with sequence similarity 76, member A
mm10_v2_chr3_-_31310349_31310378	0.123972	AAGGCAC	ENSMUST00000091259.2|Slc7a14|ENSMUSG00000069072.3|solute carrier family 7 (cationic amino acid transporter, y+ system), member 14
mm10_v2_chr12_-_85374696_85374719	0.12226	AAGGCAC	ENSMUST00000040766.7|Tmed10|ENSMUSG00000021248.8|transmembrane emp24-like trafficking protein 10 (yeast)
mm10_v2_chr5_+_142629537_142629593	0.121496	AAGGCAC	ENSMUST00000036872.9|Wipi2|ENSMUSG00000029578.9|WD repeat domain, phosphoinositide interacting 2 	ENSMUST00000110778.1|Wipi2|ENSMUSG00000029578.9|WD repeat domain, phosphoinositide interacting 2
mm10_v2_chr16_+_33251415_33251456	0.121423	AAGGCAC	ENSMUST00000023502.4|Snx4|ENSMUSG00000022808.4|sorting nexin 4
mm10_v2_chr9_+_119894876_119894913	0.120518	AAGGCAC	ENSMUST00000036561.6|Wdr48|ENSMUSG00000032512.6|WD repeat domain 48
mm10_v2_chr15_+_101224207_101224231	0.118893	AAGGCAC	ENSMUST00000000543.4|Grasp|ENSMUSG00000000531.4|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein
mm10_v2_chr17_+_73804841_73804871	0.117292	AAGGCAC	ENSMUST00000024860.7|Ehd3|ENSMUSG00000024065.7|EH-domain containing 3
mm10_v2_chr2_-_152951456_152951540	0.117269	AAGGCAC	ENSMUST00000123121.2|Dusp15|ENSMUSG00000042662.10|dual specificity phosphatase-like 15
mm10_v2_chr19_+_4214238_4214363	0.115771	AAGGCAC	ENSMUST00000046506.6|Clcf1|ENSMUSG00000040663.8|cardiotrophin-like cytokine factor 1
mm10_v2_chr11_+_80300866_80300912	0.114288	AAGGCAC	ENSMUST00000017836.7|Rhbdl3|ENSMUSG00000017692.8|rhomboid, veinlet-like 3 (Drosophila)
mm10_v2_chr14_+_111675113_111675119	0.112033	AAGGCAC	ENSMUST00000042767.7|Slitrk5|ENSMUSG00000033214.9|SLIT and NTRK-like family, member 5
mm10_v2_chr4_-_40853950_40854021	0.107607	AAGGCAC	ENSMUST00000030121.6|B4galt1|ENSMUSG00000028413.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 	ENSMUST00000108096.2|B4galt1|ENSMUSG00000028413.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
mm10_v2_chr4_+_48045144_48045160	0.106849	AAGGCAC	ENSMUST00000030025.3|Nr4a3|ENSMUSG00000028341.3|nuclear receptor subfamily 4, group A, member 3
mm10_v2_chr9_-_21798502_21798561	0.105141	AAGGCAC	ENSMUST00000034717.5|Kank2|ENSMUSG00000032194.8|KN motif and ankyrin repeat domains 2
mm10_v2_chr2_-_137116624_137116644	0.103784	AAGGCAC	ENSMUST00000028735.7|Jag1|ENSMUSG00000027276.7|jagged 1
mm10_v2_chr10_+_73821857_73821883	0.103607	AAGGCAC	ENSMUST00000177128.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000064562.7|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000129404.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105426.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131321.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000126920.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000147189.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105424.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000092420.6|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000105429.3|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000131724.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152655.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000151116.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000155701.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000152819.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000125517.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000124046.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000149977.2|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000146682.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15 	ENSMUST00000177107.1|Pcdh15|ENSMUSG00000052613.10|protocadherin 15
mm10_v2_chr11_-_102407455_102407544	0.102576	AAGGCAC	ENSMUST00000107098.1|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39 	ENSMUST00000018821.2|Slc25a39|ENSMUSG00000018677.3|solute carrier family 25, member 39
mm10_v2_chr14_-_65098031_65098106	0.101479	AAGGCAC	ENSMUST00000022550.7|Extl3|ENSMUSG00000021978.8|exostoses (multiple)-like 3
mm10_v2_chr2_+_121866918_121866997	0.101223	AAGGCAC	ENSMUST00000078752.3|Casc4|ENSMUSG00000060227.9|cancer susceptibility candidate 4 	ENSMUST00000110586.3|Casc4|ENSMUSG00000060227.9|cancer susceptibility candidate 4
mm10_v2_chr10_-_7212222_7212247	0.10055	AAGGCAC	ENSMUST00000015346.5|Cnksr3|ENSMUSG00000015202.7|Cnksr family member 3
mm10_v2_chr3_+_34020075_34020082	0.0991252	AAGGCAC	ENSMUST00000001620.8|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog 	ENSMUST00000167354.1|Fxr1|ENSMUSG00000027680.9|fragile X mental retardation gene 1, autosomal homolog
mm10_v2_chr1_-_155742120_155742136	0.0974668	AAGGCAC	ENSMUST00000027740.7|Lhx4|ENSMUSG00000026468.8|LIM homeobox protein 4
mm10_v2_chr1_-_152090308_152090332	0.0972132	AAGGCAC	ENSMUST00000044581.7|1700025G04Rik|ENSMUSG00000032666.10|RIKEN cDNA 1700025G04 gene
mm10_v2_chr6_-_51469869_51469894	0.0947432	AAGGCAC	ENSMUST00000114459.1|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1 	ENSMUST00000069949.6|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1
mm10_v2_chr19_+_27217357_27217424	0.0939555	AAGGCAC	ENSMUST00000047645.6|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor 	ENSMUST00000167487.1|Vldlr|ENSMUSG00000024924.8|very low density lipoprotein receptor
mm10_v2_chr15_+_82147238_82147275	0.0916045	AAGGCAC	ENSMUST00000023100.6|Srebf2|ENSMUSG00000022463.7|sterol regulatory element binding factor 2
mm10_v2_chr11_+_103028327_103028368	0.0896927	AAGGCAC	ENSMUST00000021314.7|Nmt1|ENSMUSG00000020936.8|N-myristoyltransferase 1
mm10_v2_chr4_+_108619925_108619994	0.0896589	AAGGCAC	ENSMUST00000030320.6|Cc2d1b|ENSMUSG00000028582.8|coiled-coil and C2 domain containing 1B
mm10_v2_chr11_+_58978093_58978149	0.0852867	AAGGCAC	ENSMUST00000108809.1|Trim11|ENSMUSG00000020455.10|tripartite motif-containing 11 	ENSMUST00000108810.3|Trim11|ENSMUSG00000020455.10|tripartite motif-containing 11 	ENSMUST00000093061.6|Trim11|ENSMUSG00000020455.10|tripartite motif-containing 11
mm10_v2_chr15_+_88862178_88862193	0.0850434	AAGGCAC	ENSMUST00000042818.9|Pim3|ENSMUSG00000035828.10|proviral integration site 3
mm10_v2_chr2_-_71546745_71546758	0.0802084	AAGGCAC	ENSMUST00000024159.6|Dlx2|ENSMUSG00000023391.7|distal-less homeobox 2
mm10_v2_chr12_+_111166349_111166397	0.0781821	AAGGCAC	ENSMUST00000117269.1|Traf3|ENSMUSG00000021277.10|TNF receptor-associated factor 3
mm10_v2_chr13_-_17805093_17805189	0.0766324	AAGGCAC	ENSMUST00000042365.7|Cdk13|ENSMUSG00000041297.7|cyclin-dependent kinase 13
mm10_v2_chr2_+_27009926_27009935	0.0751997	AAGGCAC	ENSMUST00000114005.2|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1 	ENSMUST00000114004.1|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1 	ENSMUST00000114006.1|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1 	ENSMUST00000114007.1|Cacfd1|ENSMUSG00000015488.8|calcium channel flower domain containing 1
mm10_v2_chr7_-_47008397_47008421	0.0735415	AAGGCAC	ENSMUST00000061639.7|Spty2d1|ENSMUSG00000049516.7|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
mm10_v2_chr12_-_104751900_104751952	0.0734938	AAGGCAC	ENSMUST00000041987.6|Dicer1|ENSMUSG00000041415.9|dicer 1, ribonuclease type III
mm10_v2_chr8_-_36249292_36249516	0.0663481	AAGGCAC	ENSMUST00000065297.5|Lonrf1|ENSMUSG00000039633.6|LON peptidase N-terminal domain and ring finger 1
mm10_v2_chr4_-_151861762_151861876	0.0645452	AAGGCAC	ENSMUST00000097774.2|Camta1|ENSMUSG00000014592.13|calmodulin binding transcription activator 1
mm10_v2_chr5_-_103100054_103100088	0.0625162	AAGGCAC	ENSMUST00000112848.1|Mapk10|ENSMUSG00000046709.10|mitogen-activated protein kinase 10
mm10_v2_chr16_-_63864114_63864182	0.060436	AAGGCAC	ENSMUST00000064405.6|Epha3|ENSMUSG00000052504.6|Eph receptor A3
mm10_v2_chr3_+_157534351_157534411	0.0593476	AAGGCAC	ENSMUST00000029831.9|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2 	ENSMUST00000106057.1|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2 	ENSMUST00000106063.2|Zranb2|ENSMUSG00000028180.12|zinc finger, RAN-binding domain containing 2
mm10_v2_chr3_-_80802789_80802840	0.0590358	AAGGCAC	ENSMUST00000107745.1|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2) 	ENSMUST00000075316.4|Gria2|ENSMUSG00000033981.8|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm10_v2_chr9_+_56994932_56994986	0.0586997	AAGGCAC	ENSMUST00000034832.6|Ptpn9|ENSMUSG00000032290.6|protein tyrosine phosphatase, non-receptor type 9
mm10_v2_chr13_+_69612226_69612260	0.0536684	AAGGCAC	ENSMUST00000022087.6|Nsun2|ENSMUSG00000021595.12|NOL1/NOP2/Sun domain family member 2
mm10_v2_chr5_+_88720855_88720876	0.0536604	AAGGCAC	ENSMUST00000113229.1|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B 	ENSMUST00000006424.7|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B
mm10_v2_chr12_+_59066908_59066931	0.0534162	AAGGCAC	ENSMUST00000021381.4|Pnn|ENSMUSG00000020994.4|pinin
mm10_v2_chrX_+_6577259_6577294	0.0518095	AAGGCAC	ENSMUST00000089520.2|Shroom4|ENSMUSG00000068270.9|shroom family member 4
mm10_v2_chr15_+_82256023_82256130	0.0517552	AAGGCAC	ENSMUST00000143238.1|1500009C09Rik|ENSMUSG00000068099.4|RIKEN cDNA 1500009C09 gene
mm10_v2_chr9_+_45117813_45117881	0.0500925	AAGGCAC	ENSMUST00000170998.1|Scn2b|ENSMUSG00000070304.5|sodium channel, voltage-gated, type II, beta 	ENSMUST00000093855.3|Scn2b|ENSMUSG00000070304.5|sodium channel, voltage-gated, type II, beta
mm10_v2_chr10_-_116581478_116581511	0.0500528	AAGGCAC	ENSMUST00000105267.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000105265.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000167706.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000168036.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000169921.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000020374.5|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2
mm10_v2_chr12_-_26415256_26415303	0.0494315	AAGGCAC	ENSMUST00000020971.6|Rnf144a|ENSMUSG00000020642.6|ring finger protein 144A 	ENSMUST00000062149.4|Rnf144a|ENSMUSG00000020642.6|ring finger protein 144A
mm10_v2_chr6_-_72439549_72439564	0.0478703	AAGGCAC	ENSMUST00000059472.8|Mat2a|ENSMUSG00000053907.9|methionine adenosyltransferase II, alpha
mm10_v2_chr9_+_32696005_32696121	0.0462102	AAGGCAC	ENSMUST00000034534.6|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000050797.7|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain 	ENSMUST00000184887.1|Ets1|ENSMUSG00000032035.9|E26 avian leukemia oncogene 1, 5' domain
mm10_v2_chr5_-_36484112_36484302	0.0457129	AAGGCAC	ENSMUST00000119916.1|Tada2b|ENSMUSG00000029196.9|transcriptional adaptor 2B 	ENSMUST00000031097.7|Tada2b|ENSMUSG00000029196.9|transcriptional adaptor 2B
mm10_v2_chr5_+_115341225_115341270	0.045401	AAGGCAC	ENSMUST00000031508.4|Triap1|ENSMUSG00000029535.4|TP53 regulated inhibitor of apoptosis 1
mm10_v2_chr4_-_126429501_126429556	0.0434045	AAGGCAC	ENSMUST00000069097.6|Ago3|ENSMUSG00000028842.9|argonaute RISC catalytic subunit 3
mm10_v2_chr7_-_63938862_63938933	0.0406607	AAGGCAC	ENSMUST00000063694.8|Klf13|ENSMUSG00000052040.9|Kruppel-like factor 13
mm10_v2_chr14_+_63606491_63606527	0.0360589	AAGGCAC	ENSMUST00000119973.2|Xkr6|ENSMUSG00000035067.9|X Kell blood group precursor related family member 6 homolog
mm10_v2_chr11_-_52000432_52000484	0.030816	AAGGCAC	ENSMUST00000020657.6|Ube2b|ENSMUSG00000020390.6|ubiquitin-conjugating enzyme E2B
mm10_v2_chr18_-_10181792_10181792	0.0279321	AAGGCAC	ENSMUST00000067947.5|Rock1|ENSMUSG00000024290.8|Rho-associated coiled-coil containing protein kinase 1
mm10_v2_chr19_-_60226666_60226706	0.027466	AAGGCAC	ENSMUST00000065286.1|D19Ertd737e|ENSMUSG00000057858.7|DNA segment, Chr 19, ERATO Doi 737, expressed
mm10_v2_chr5_+_130219706_130219744	0.0260876	AAGGCAC	ENSMUST00000065329.6|Tmem248|ENSMUSG00000053094.9|transmembrane protein 248
mm10_v2_chr13_+_75707484_75707510	0.0240601	AAGGCAC	ENSMUST00000001583.6|Ell2|ENSMUSG00000001542.6|elongation factor RNA polymerase II 2
mm10_v2_chr5_-_75044562_75044774	0.017606	AAGGCAC	ENSMUST00000075452.5|Chic2|ENSMUSG00000029229.7|cysteine-rich hydrophobic domain 2
mm10_v2_chr7_+_126272589_126272619	0.0173751	AAGGCAC	ENSMUST00000056028.9|Sbk1|ENSMUSG00000042978.9|SH3-binding kinase 1
mm10_v2_chr18_-_63387124_63387189	0.0165065	AAGGCAC	ENSMUST00000047480.6|Piezo2|ENSMUSG00000041482.10|piezo-type mechanosensitive ion channel component 2 	ENSMUST00000046860.5|Piezo2|ENSMUSG00000041482.10|piezo-type mechanosensitive ion channel component 2
mm10_v2_chr6_-_86765866_86765921	0.0161513	AAGGCAC	ENSMUST00000113675.1|Anxa4|ENSMUSG00000029994.11|annexin A4
mm10_v2_chr10_+_7725997_7726014	0.0127296	AAGGCAC	ENSMUST00000019929.6|Katna1|ENSMUSG00000019794.7|katanin p60 (ATPase-containing) subunit A1 	ENSMUST00000165806.1|Katna1|ENSMUSG00000019794.7|katanin p60 (ATPase-containing) subunit A1
mm10_v2_chr12_+_76324860_76324898	0.011986	AAGGCAC	ENSMUST00000095610.2|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5 	ENSMUST00000154078.2|Akap5|ENSMUSG00000021057.9|A kinase (PRKA) anchor protein 5
mm10_v2_chr3_+_104638658_104638675	0.0106109	AAGGCAC	ENSMUST00000046212.1|Slc16a1|ENSMUSG00000032902.1|solute carrier family 16 (monocarboxylic acid transporters), member 1
mm10_v2_chr6_-_6882068_6882092	0.0102144	AAGGCAC	ENSMUST00000142635.1|Dlx5|ENSMUSG00000029755.9|distal-less homeobox 5 	ENSMUST00000052609.8|Dlx5|ENSMUSG00000029755.9|distal-less homeobox 5
mm10_v2_chr11_+_77686155_77686179	0.010211	AAGGCAC	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr14_-_103844173_103844198	0.00991051	AAGGCAC	ENSMUST00000022718.3|Ednrb|ENSMUSG00000022122.8|endothelin receptor type B
mm10_v2_chr8_-_29219338_29219338	0.0090347	AAGGCAC	ENSMUST00000168630.2|Unc5d|ENSMUSG00000063626.5|unc-5 homolog D (C. elegans)
mm10_v2_chr1_-_21079162_21079243	0.00845508	AAGGCAC	ENSMUST00000037998.4|Tram2|ENSMUSG00000041779.4|translocating chain-associating membrane protein 2
mm10_v2_chr17_+_87282880_87282950	0.00796136	AAGGCAC	ENSMUST00000041110.5|Ttc7|ENSMUSG00000036918.9|tetratricopeptide repeat domain 7 	ENSMUST00000125875.1|Ttc7|ENSMUSG00000036918.9|tetratricopeptide repeat domain 7
mm10_v2_chrX_-_74085586_74085652	0.00668605	AAGGCAC	ENSMUST00000123362.1|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2 	ENSMUST00000140399.1|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2 	ENSMUST00000100750.3|Mecp2|ENSMUSG00000031393.10|methyl CpG binding protein 2
mm10_v2_chr10_+_81136223_81136271	0.00583521	AAGGCAC	ENSMUST00000048128.8|Zbtb7a|ENSMUSG00000035011.9|zinc finger and BTB domain containing 7a
mm10_v2_chr4_-_49845549_49845549	0.00447317	AAGGCAC	ENSMUST00000093859.4|Grin3a|ENSMUSG00000039579.9|glutamate receptor ionotropic, NMDA3A 	ENSMUST00000076674.3|Grin3a|ENSMUSG00000039579.9|glutamate receptor ionotropic, NMDA3A
mm10_v2_chr2_-_157204483_157204542	0.00379453	AAGGCAC	ENSMUST00000029170.7|Rbl1|ENSMUSG00000027641.7|retinoblastoma-like 1 (p107)
