mm10_v2_chrX_+_42149288_42149412	0.101588	AACCUGG	ENSMUST00000115073.2|Stag2|ENSMUSG00000025862.8|stromal antigen 2 	ENSMUST00000115072.1|Stag2|ENSMUSG00000025862.8|stromal antigen 2
mm10_v2_chr2_+_79255500_79255552	0.0856617	AACCUGG	ENSMUST00000099972.4|Itga4|ENSMUSG00000027009.12|integrin alpha 4
mm10_v2_chr15_+_103240405_103240432	0.0816909	AACCUGG	ENSMUST00000036004.9|Hnrnpa1|ENSMUSG00000046434.9|heterogeneous nuclear ribonucleoprotein A1 	ENSMUST00000087351.7|Hnrnpa1|ENSMUSG00000046434.9|heterogeneous nuclear ribonucleoprotein A1
mm10_v2_chr2_+_75659253_75659318	0.073425	AACCUGG	ENSMUST00000111964.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000111962.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000111961.1|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000164947.2|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3 	ENSMUST00000090792.4|Hnrnpa3|ENSMUSG00000059005.7|heterogeneous nuclear ribonucleoprotein A3
mm10_v2_chr1_-_143702832_143702893	0.0602916	AACCUGG	ENSMUST00000018337.7|Cdc73|ENSMUSG00000026361.7|cell division cycle 73, Paf1/RNA polymerase II complex component
mm10_v2_chr6_-_39206782_39206831	0.0577628	AACCUGG	ENSMUST00000002305.8|Jhdm1d|ENSMUSG00000042599.8|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm10_v2_chr2_-_37647199_37647285	0.0332746	AACCUGG	ENSMUST00000028279.3|Strbp|ENSMUSG00000026915.10|spermatid perinuclear RNA binding protein
mm10_v2_chr5_-_20951769_20951824	0.0330022	AACCUGG	ENSMUST00000036489.5|Rsbn1l|ENSMUSG00000039968.5|round spermatid basic protein 1-like
mm10_v2_chr13_+_41606216_41606216	0.0275972	AACCUGG	ENSMUST00000129449.1|Tmem170b|ENSMUSG00000087370.2|transmembrane protein 170B
mm10_v2_chr5_+_108268897_108268924	0.0234184	AACCUGG	ENSMUST00000031190.4|Dr1|ENSMUSG00000029265.4|down-regulator of transcription 1
mm10_v2_chr6_-_51469869_51469894	0.023165	AACCUGG	ENSMUST00000114459.1|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1 	ENSMUST00000069949.6|Hnrnpa2b1|ENSMUSG00000004980.10|heterogeneous nuclear ribonucleoprotein A2/B1
mm10_v2_chr15_+_54410755_54410797	0.0170716	AACCUGG	ENSMUST00000036737.3|Colec10|ENSMUSG00000038591.3|collectin sub-family member 10
mm10_v2_chr7_-_98309471_98309538	0.0160244	AACCUGG	ENSMUST00000033020.7|Acer3|ENSMUSG00000030760.8|alkaline ceramidase 3
mm10_v2_chr14_+_118854695_118854732	0.0160041	AACCUGG	ENSMUST00000100314.3|Cldn10|ENSMUSG00000022132.9|claudin 10
mm10_v2_chr5_-_21055880_21055961	0.0153376	AACCUGG	ENSMUST00000030556.7|Ptpn12|ENSMUSG00000028771.7|protein tyrosine phosphatase, non-receptor type 12
mm10_v2_chr6_-_71440623_71440645	0.0153368	AACCUGG	ENSMUST00000002292.8|Rmnd5a|ENSMUSG00000002222.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm10_v2_chr5_+_88720855_88720876	0.0140906	AACCUGG	ENSMUST00000113229.1|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B 	ENSMUST00000006424.7|Mob1b|ENSMUSG00000006262.9|MOB kinase activator 1B
mm10_v2_chr6_-_52234902_52234960	0.0103912	AACCUGG	ENSMUST00000125581.1|Hoxa10|ENSMUSG00000000938.11|homeobox A10
mm10_v2_chr4_+_34550937_34550937	0.0101302	AACCUGG	ENSMUST00000084299.5|Akirin2|ENSMUSG00000028291.7|akirin 2
mm10_v2_chr8_-_47990535_47990577	0.0100981	AACCUGG	ENSMUST00000057561.7|Wwc2|ENSMUSG00000031563.7|WW, C2 and coiled-coil domain containing 2
mm10_v2_chr9_+_72532214_72532271	0.00981325	AACCUGG	ENSMUST00000163401.2|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7 	ENSMUST00000093820.3|Rfx7|ENSMUSG00000037674.9|regulatory factor X, 7
mm10_v2_chr10_+_75518042_75518046	0.00971846	AACCUGG	ENSMUST00000020397.8|Snrpd3|ENSMUSG00000020180.8|small nuclear ribonucleoprotein D3
mm10_v2_chr5_+_72914264_72914304	0.00925338	AACCUGG	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr2_-_174472949_174473081	0.00897632	AACCUGG	ENSMUST00000016401.8|Slmo2|ENSMUSG00000016257.9|slowmo homolog 2 (Drosophila)
mm10_v2_chr6_-_38876163_38876234	0.00795969	AACCUGG	ENSMUST00000161779.1|Hipk2|ENSMUSG00000061436.9|homeodomain interacting protein kinase 2
mm10_v2_chr17_+_64600702_64600739	0.00713658	AACCUGG	ENSMUST00000086723.3|Man2a1|ENSMUSG00000024085.7|mannosidase 2, alpha 1
mm10_v2_chr18_-_79109391_79109510	0.00542663	AACCUGG	ENSMUST00000025430.8|Setbp1|ENSMUSG00000024548.9|SET binding protein 1 	ENSMUST00000161465.2|Setbp1|ENSMUSG00000024548.9|SET binding protein 1
mm10_v2_chr17_+_24414640_24414691	0.0022114	AACCUGG	ENSMUST00000115371.1|Rnps1|ENSMUSG00000034681.10|ribonucleic acid binding protein S1 	ENSMUST00000088512.5|Rnps1|ENSMUSG00000034681.10|ribonucleic acid binding protein S1 	ENSMUST00000163717.1|Rnps1|ENSMUSG00000034681.10|ribonucleic acid binding protein S1
mm10_v2_chr18_+_60526194_60526234	0.000776077	AACCUGG	ENSMUST00000025505.5|Dctn4|ENSMUSG00000024603.7|dynactin 4
