mm10_v2_chr11_+_75193783_75193864	1.47945	AACACUG	ENSMUST00000102514.3|Rtn4rl1|ENSMUSG00000045287.6|reticulon 4 receptor-like 1
mm10_v2_chr14_+_17660956_17660963	1.43665	AACACUG	ENSMUST00000022303.7|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta 	ENSMUST00000091471.4|Thrb|ENSMUSG00000021779.10|thyroid hormone receptor beta
mm10_v2_chr11_-_119547744_119547759	1.35642	AACACUG	ENSMUST00000026670.4|Nptx1|ENSMUSG00000025582.4|neuronal pentraxin 1
mm10_v2_chr8_+_128359065_128359085	1.30323	AACACUG	ENSMUST00000026917.8|Nrp1|ENSMUSG00000025810.8|neuropilin 1
mm10_v2_chr6_-_84593810_84593922	1.23783	AACACUG	ENSMUST00000077705.3|Cyp26b1|ENSMUSG00000063415.6|cytochrome P450, family 26, subfamily b, polypeptide 1 	ENSMUST00000168003.2|Cyp26b1|ENSMUSG00000063415.6|cytochrome P450, family 26, subfamily b, polypeptide 1
mm10_v2_chr1_+_187997821_187997834	1.04624	AACACUG	ENSMUST00000027906.6|Esrrg|ENSMUSG00000026610.7|estrogen-related receptor gamma
mm10_v2_chr12_+_40446050_40446099	1.03708	AACACUG	ENSMUST00000037488.6|Dock4|ENSMUSG00000035954.9|dedicator of cytokinesis 4
mm10_v2_chr12_+_78226627_78226655	0.995845	AACACUG	ENSMUST00000110388.2|Gphn|ENSMUSG00000047454.5|gephyrin 	ENSMUST00000052472.4|Gphn|ENSMUSG00000047454.5|gephyrin
mm10_v2_chr3_-_121263159_121263252	0.957356	AACACUG	ENSMUST00000128909.1|Tmem56|ENSMUSG00000028132.9|transmembrane protein 56
mm10_v2_chr3_+_57736056_57736128	0.945963	AACACUG	ENSMUST00000041826.9|Rnf13|ENSMUSG00000036503.9|ring finger protein 13
mm10_v2_chr17_-_91092715_91092822	0.934996	AACACUG	ENSMUST00000160800.2|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000159778.1|Nrxn1|ENSMUSG00000024109.12|neurexin I 	ENSMUST00000160844.3|Nrxn1|ENSMUSG00000024109.12|neurexin I
mm10_v2_chr11_-_61855026_61855073	0.910228	AACACUG	ENSMUST00000004920.3|Ulk2|ENSMUSG00000004798.8|unc-51 like kinase 2
mm10_v2_chr4_-_108301045_108301107	0.905114	AACACUG	ENSMUST00000043616.6|Zyg11b|ENSMUSG00000034636.9|zyg-ll family member B, cell cycle regulator
mm10_v2_chr5_-_106696819_106696839	0.887525	AACACUG	ENSMUST00000127434.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112696.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644 	ENSMUST00000112698.1|Zfp644|ENSMUSG00000049606.10|zinc finger protein 644
mm10_v2_chr13_+_46669517_46669545	0.880928	AACACUG	ENSMUST00000099547.3|C78339|ENSMUSG00000069237.8|expressed sequence C78339
mm10_v2_chr9_+_100643448_100643542	0.875258	AACACUG	ENSMUST00000146312.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1 	ENSMUST00000129269.1|Stag1|ENSMUSG00000037286.9|stromal antigen 1
mm10_v2_chr8_+_45507768_45507818	0.799437	AACACUG	ENSMUST00000067065.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000098788.3|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000067107.7|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000171337.2|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000138049.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2 	ENSMUST00000141039.1|Sorbs2|ENSMUSG00000031626.10|sorbin and SH3 domain containing 2
mm10_v2_chrX_+_13071500_13071576	0.794475	AACACUG	ENSMUST00000089302.4|Usp9x|ENSMUSG00000031010.11|ubiquitin specific peptidase 9, X chromosome
mm10_v2_chr11_+_93996082_93996103	0.788866	AACACUG	ENSMUST00000041956.7|Spag9|ENSMUSG00000020859.10|sperm associated antigen 9
mm10_v2_chr1_+_191906743_191906767	0.768383	AACACUG	ENSMUST00000044954.6|Slc30a1|ENSMUSG00000037434.7|solute carrier family 30 (zinc transporter), member 1
mm10_v2_chr1_+_4807823_4807928	0.765906	AACACUG	ENSMUST00000027036.4|Lypla1|ENSMUSG00000025903.8|lysophospholipase 1 	ENSMUST00000119612.2|Lypla1|ENSMUSG00000025903.8|lysophospholipase 1 	ENSMUST00000137887.1|Lypla1|ENSMUSG00000025903.8|lysophospholipase 1 	ENSMUST00000115529.1|Lypla1|ENSMUSG00000025903.8|lysophospholipase 1 	ENSMUST00000150971.1|Lypla1|ENSMUSG00000025903.8|lysophospholipase 1
mm10_v2_chr12_-_57546121_57546141	0.765087	AACACUG	ENSMUST00000044380.6|Foxa1|ENSMUSG00000035451.6|forkhead box A1
mm10_v2_chr17_+_86167777_86167795	0.75774	AACACUG	ENSMUST00000097275.2|Prkce|ENSMUSG00000045038.8|protein kinase C, epsilon
mm10_v2_chrX_+_100767719_100767749	0.746335	AACACUG	ENSMUST00000000901.6|Dlg3|ENSMUSG00000000881.6|discs, large homolog 3 (Drosophila) 	ENSMUST00000113736.2|Dlg3|ENSMUSG00000000881.6|discs, large homolog 3 (Drosophila) 	ENSMUST00000087984.4|Dlg3|ENSMUSG00000000881.6|discs, large homolog 3 (Drosophila)
mm10_v2_chr8_+_90828820_90828842	0.731443	AACACUG	ENSMUST00000109614.2|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9 	ENSMUST00000048665.6|Chd9|ENSMUSG00000056608.7|chromodomain helicase DNA binding protein 9
mm10_v2_chr3_-_57575760_57575836	0.728809	AACACUG	ENSMUST00000029380.7|Wwtr1|ENSMUSG00000027803.8|WW domain containing transcription regulator 1
mm10_v2_chr3_-_146812951_146812983	0.728097	AACACUG	ENSMUST00000102515.3|Prkacb|ENSMUSG00000005034.9|protein kinase, cAMP dependent, catalytic, beta
mm10_v2_chr16_+_24393350_24393428	0.725337	AACACUG	ENSMUST00000038053.6|Lpp|ENSMUSG00000033306.8|LIM domain containing preferred translocation partner in lipoma
mm10_v2_chr16_-_44139196_44139305	0.724396	AACACUG	ENSMUST00000063661.6|Atp6v1a|ENSMUSG00000052459.7|ATPase, H+ transporting, lysosomal V1 subunit A 	ENSMUST00000114666.2|Atp6v1a|ENSMUSG00000052459.7|ATPase, H+ transporting, lysosomal V1 subunit A
mm10_v2_chr5_+_93093428_93093457	0.713849	AACACUG	ENSMUST00000074733.7|Sept11|ENSMUSG00000058013.8|septin 11
mm10_v2_chr15_+_68928414_68928421	0.707051	AACACUG	ENSMUST00000022954.6|Khdrbs3|ENSMUSG00000022332.7|KH domain containing, RNA binding, signal transduction associated 3
mm10_v2_chr13_-_64274879_64274947	0.69597	AACACUG	ENSMUST00000109770.1|Cdc14b|ENSMUSG00000033102.8|CDC14 cell division cycle 14B
mm10_v2_chr12_-_118301429_118301458	0.693515	AACACUG	ENSMUST00000026367.9|Sp4|ENSMUSG00000025323.9|trans-acting transcription factor 4
mm10_v2_chr4_+_57637816_57637846	0.691369	AACACUG	ENSMUST00000150412.1|Gm20459|ENSMUSG00000089945.4|predicted gene 20459
mm10_v2_chr14_+_11553523_11553542	0.68773	AACACUG	ENSMUST00000022264.6|Ptprg|ENSMUSG00000021745.7|protein tyrosine phosphatase, receptor type, G
mm10_v2_chr2_-_148045891_148045948	0.6729	AACACUG	ENSMUST00000109964.1|Foxa2|ENSMUSG00000037025.5|forkhead box A2
mm10_v2_chr8_+_46163651_46163729	0.668301	AACACUG	ENSMUST00000034048.6|4933411K20Rik|ENSMUSG00000031631.9|RIKEN cDNA 4933411K20 gene 	ENSMUST00000145229.1|4933411K20Rik|ENSMUSG00000031631.9|RIKEN cDNA 4933411K20 gene
mm10_v2_chrX_-_38564519_38564555	0.658021	AACACUG	ENSMUST00000016681.8|Cul4b|ENSMUSG00000031095.9|cullin 4B
mm10_v2_chr4_-_70534904_70534987	0.657891	AACACUG	ENSMUST00000107359.2|Megf9|ENSMUSG00000039270.3|multiple EGF-like-domains 9
mm10_v2_chr2_+_15055274_15055379	0.638948	AACACUG	ENSMUST00000069870.3|Arl5b|ENSMUSG00000017418.7|ADP-ribosylation factor-like 5B
mm10_v2_chr16_+_41532999_41533069	0.623569	AACACUG	ENSMUST00000099761.3|Lsamp|ENSMUSG00000061080.5|limbic system-associated membrane protein
mm10_v2_chr2_-_104816696_104816792	0.621255	AACACUG	ENSMUST00000117237.1|Qser1|ENSMUSG00000074994.4|glutamine and serine rich 1
mm10_v2_chr18_-_46525940_46525999	0.616369	AACACUG	ENSMUST00000036226.5|Fem1c|ENSMUSG00000033319.5|fem-1 homolog c (C.elegans)
mm10_v2_chr7_+_100706702_100706731	0.612133	AACACUG	ENSMUST00000049053.7|Fam168a|ENSMUSG00000029461.9|family with sequence similarity 168, member A
mm10_v2_chr19_-_59345746_59345853	0.611222	AACACUG	ENSMUST00000099274.2|Pdzd8|ENSMUSG00000074746.2|PDZ domain containing 8
mm10_v2_chr4_+_11156411_11156453	0.602866	AACACUG	ENSMUST00000029865.3|Trp53inp1|ENSMUSG00000028211.5|transformation related protein 53 inducible nuclear protein 1
mm10_v2_chrX_+_166238901_166238914	0.601703	AACACUG	ENSMUST00000112235.1|Gpm6b|ENSMUSG00000031342.11|glycoprotein m6b
mm10_v2_chr11_+_21091291_21091339	0.601661	AACACUG	ENSMUST00000093290.5|Peli1|ENSMUSG00000020134.7|pellino 1
mm10_v2_chr7_-_119895697_119895752	0.595977	AACACUG	ENSMUST00000059851.6|Dcun1d3|ENSMUSG00000048787.6|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)
mm10_v2_chrX_-_51018011_51018032	0.586291	AACACUG	ENSMUST00000053593.7|Rap2c|ENSMUSG00000050029.7|RAP2C, member of RAS oncogene family
mm10_v2_chr17_+_8165501_8165540	0.579925	AACACUG	ENSMUST00000097419.3|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner 	ENSMUST00000024636.8|Fgfr1op|ENSMUSG00000069135.5|Fgfr1 oncogene partner
mm10_v2_chr14_-_49066653_49066674	0.575549	AACACUG	ENSMUST00000162175.1|Exoc5|ENSMUSG00000061244.7|exocyst complex component 5
mm10_v2_chr3_-_69127098_69127113	0.570103	AACACUG	ENSMUST00000029353.2|Kpna4|ENSMUSG00000027782.4|karyopherin (importin) alpha 4
mm10_v2_chr7_+_59228743_59228769	0.559608	AACACUG	ENSMUST00000107537.1|Ube3a|ENSMUSG00000025326.8|ubiquitin protein ligase E3A
mm10_v2_chr9_-_50727921_50728008	0.54998	AACACUG	ENSMUST00000118707.1|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1 	ENSMUST00000034566.8|Dixdc1|ENSMUSG00000032064.11|DIX domain containing 1
mm10_v2_chr11_-_20831009_20831056	0.541892	AACACUG	ENSMUST00000047028.8|Lgalsl|ENSMUSG00000042363.8|lectin, galactoside binding-like
mm10_v2_chr12_-_31634592_31634677	0.54182	AACACUG	ENSMUST00000020979.7|Bcap29|ENSMUSG00000020650.8|B cell receptor associated protein 29 	ENSMUST00000177962.1|Bcap29|ENSMUSG00000020650.8|B cell receptor associated protein 29
mm10_v2_chr3_-_116424007_116424032	0.541413	AACACUG	ENSMUST00000090464.4|Cdc14a|ENSMUSG00000033502.8|CDC14 cell division cycle 14A
mm10_v2_chr11_-_50325599_50325673	0.539073	AACACUG	ENSMUST00000179865.1|Canx|ENSMUSG00000020368.9|calnexin 	ENSMUST00000020637.8|Canx|ENSMUSG00000020368.9|calnexin
mm10_v2_chr15_-_59082026_59082090	0.537253	AACACUG	ENSMUST00000080371.6|Mtss1|ENSMUSG00000022353.9|metastasis suppressor 1
mm10_v2_chr17_+_88440711_88440741	0.531913	AACACUG	ENSMUST00000112238.2|Foxn2|ENSMUSG00000034998.12|forkhead box N2 	ENSMUST00000155640.1|Foxn2|ENSMUSG00000034998.12|forkhead box N2
mm10_v2_chr3_-_79567679_79567764	0.531334	AACACUG	ENSMUST00000076136.4|Fnip2|ENSMUSG00000061175.5|folliculin interacting protein 2
mm10_v2_chr1_+_136624901_136624949	0.525065	AACACUG	ENSMUST00000047734.8|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281 	ENSMUST00000112046.1|Zfp281|ENSMUSG00000041483.8|zinc finger protein 281
mm10_v2_chr9_+_52047150_52047163	0.515811	AACACUG	ENSMUST00000163153.1|Rdx|ENSMUSG00000032050.10|radixin
mm10_v2_chr18_+_42511496_42511521	0.514376	AACACUG	ENSMUST00000025375.7|Tcerg1|ENSMUSG00000024498.9|transcription elongation regulator 1 (CA150)
mm10_v2_chr8_-_36613937_36613948	0.507202	AACACUG	ENSMUST00000033923.7|Dlc1|ENSMUSG00000031523.10|deleted in liver cancer 1
mm10_v2_chr9_+_4383535_4383535	0.50673	AACACUG	ENSMUST00000047173.9|Msantd4|ENSMUSG00000041124.10|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
mm10_v2_chr15_+_12117813_12117846	0.505923	AACACUG	ENSMUST00000122941.1|Zfr|ENSMUSG00000022201.9|zinc finger RNA binding protein
mm10_v2_chr4_-_121098190_121098250	0.504498	AACACUG	ENSMUST00000058754.2|Zmpste24|ENSMUSG00000043207.4|zinc metallopeptidase, STE24
mm10_v2_chr15_-_93336800_93336852	0.501388	AACACUG	ENSMUST00000080299.6|Yaf2|ENSMUSG00000022634.9|YY1 associated factor 2
mm10_v2_chr18_+_53862087_53862143	0.493591	AACACUG	ENSMUST00000069597.6|Csnk1g3|ENSMUSG00000073563.2|casein kinase 1, gamma 3
mm10_v2_chr11_-_23665862_23665959	0.492163	AACACUG	ENSMUST00000020523.3|Pex13|ENSMUSG00000020283.5|peroxisomal biogenesis factor 13
mm10_v2_chr3_-_138143352_138143396	0.49037	AACACUG	ENSMUST00000098580.2|Mttp|ENSMUSG00000028158.8|microsomal triglyceride transfer protein
mm10_v2_chr14_-_61439831_61439947	0.488275	AACACUG	ENSMUST00000022496.7|Kpna3|ENSMUSG00000021929.8|karyopherin (importin) alpha 3
mm10_v2_chr17_-_59013264_59013372	0.486044	AACACUG	ENSMUST00000174122.1|Nudt12|ENSMUSG00000024228.6|nudix (nucleoside diphosphate linked moiety X)-type motif 12 	ENSMUST00000025065.5|Nudt12|ENSMUSG00000024228.6|nudix (nucleoside diphosphate linked moiety X)-type motif 12
mm10_v2_chr14_+_12284198_12284239	0.485492	AACACUG	ENSMUST00000112669.3|3830406C13Rik|ENSMUSG00000033111.9|RIKEN cDNA 3830406C13 gene 	ENSMUST00000163392.1|3830406C13Rik|ENSMUSG00000033111.9|RIKEN cDNA 3830406C13 gene
mm10_v2_chr8_-_85432841_85432859	0.484657	AACACUG	ENSMUST00000047749.5|4921524J17Rik|ENSMUSG00000036934.8|RIKEN cDNA 4921524J17 gene
mm10_v2_chr3_+_142530329_142530386	0.480319	AACACUG	ENSMUST00000171263.1|Gbp7|ENSMUSG00000040253.9|guanylate binding protein 7 	ENSMUST00000045097.9|Gbp7|ENSMUSG00000040253.9|guanylate binding protein 7
mm10_v2_chr6_+_54595111_54595243	0.477922	AACACUG	ENSMUST00000119706.1|Plekha8|ENSMUSG00000005225.9|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
mm10_v2_chr6_+_100833606_100833663	0.476776	AACACUG	ENSMUST00000063854.4|Ppp4r2|ENSMUSG00000052144.6|protein phosphatase 4, regulatory subunit 2
mm10_v2_chr4_+_57845240_57845265	0.462805	AACACUG	ENSMUST00000102903.1|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2 	ENSMUST00000107598.3|Akap2|ENSMUSG00000038729.14|A kinase (PRKA) anchor protein 2
mm10_v2_chr10_-_114801364_114801364	0.460992	AACACUG	ENSMUST00000061632.7|Trhde|ENSMUSG00000050663.7|TRH-degrading enzyme
mm10_v2_chr18_+_11052487_11052510	0.450153	AACACUG	ENSMUST00000047762.7|Gata6|ENSMUSG00000005836.8|GATA binding protein 6
mm10_v2_chr15_+_32920723_32920826	0.448668	AACACUG	ENSMUST00000022871.5|Sdc2|ENSMUSG00000022261.5|syndecan 2
mm10_v2_chr15_-_44428303_44428337	0.441646	AACACUG	ENSMUST00000038719.6|Nudcd1|ENSMUSG00000038736.9|NudC domain containing 1
mm10_v2_chr6_-_143947092_143947111	0.437449	AACACUG	ENSMUST00000144289.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5 	ENSMUST00000111748.1|Sox5|ENSMUSG00000041540.10|SRY-box containing gene 5
mm10_v2_chr2_-_12419456_12419474	0.430041	AACACUG	ENSMUST00000154899.1|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A 	ENSMUST00000028105.6|Fam188a|ENSMUSG00000026767.6|family with sequence similarity 188, member A
mm10_v2_chr13_+_81657732_81657846	0.429409	AACACUG	ENSMUST00000049055.6|Lysmd3|ENSMUSG00000035840.6|LysM, putative peptidoglycan-binding, domain containing 3
mm10_v2_chr6_-_13608011_13608100	0.426697	AACACUG	ENSMUST00000031554.2|Tmem168|ENSMUSG00000029569.3|transmembrane protein 168
mm10_v2_chr5_+_111330742_111330768	0.426372	AACACUG	ENSMUST00000086635.4|Pitpnb|ENSMUSG00000050017.7|phosphatidylinositol transfer protein, beta
mm10_v2_chr9_-_48495321_48495335	0.422501	AACACUG	ENSMUST00000170000.2|Rbm7|ENSMUSG00000042396.9|RNA binding motif protein 7
mm10_v2_chr7_-_73541738_73541758	0.41842	AACACUG	ENSMUST00000169922.2|Chd2|ENSMUSG00000078671.4|chromodomain helicase DNA binding protein 2
mm10_v2_chr18_+_35562158_35562174	0.418292	AACACUG	ENSMUST00000166793.1|Matr3|ENSMUSG00000037236.8|matrin 3
mm10_v2_chr18_+_5591860_5591902	0.416033	AACACUG	ENSMUST00000025081.5|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1 	ENSMUST00000159390.1|Zeb1|ENSMUSG00000024238.7|zinc finger E-box binding homeobox 1
mm10_v2_chr8_-_110039330_110039350	0.415638	AACACUG	ENSMUST00000109222.2|Chst4|ENSMUSG00000035930.8|carbohydrate (chondroitin 6/keratan) sulfotransferase 4
mm10_v2_chr14_+_21499770_21499883	0.413028	AACACUG	ENSMUST00000182855.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000069648.7|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B 	ENSMUST00000182405.1|Kat6b|ENSMUSG00000021767.10|K(lysine) acetyltransferase 6B
mm10_v2_chr5_+_76974683_76974727	0.410202	AACACUG	ENSMUST00000101087.3|Srp72|ENSMUSG00000036323.8|signal recognition particle 72 	ENSMUST00000120550.1|Srp72|ENSMUSG00000036323.8|signal recognition particle 72
mm10_v2_chr17_+_26715644_26715724	0.408585	AACACUG	ENSMUST00000062519.7|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000144221.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000142539.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor 	ENSMUST00000151681.1|Crebrf|ENSMUSG00000048249.8|CREB3 regulatory factor
mm10_v2_chr9_-_72111827_72111895	0.40689	AACACUG	ENSMUST00000183404.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12 	ENSMUST00000184783.1|Tcf12|ENSMUSG00000032228.10|transcription factor 12
mm10_v2_chr18_+_10725530_10725564	0.406678	AACACUG	ENSMUST00000052838.4|Mib1|ENSMUSG00000024294.7|mindbomb homolog 1 (Drosophila)
mm10_v2_chrX_-_157598656_157598715	0.402872	AACACUG	ENSMUST00000149249.1|Mbtps2|ENSMUSG00000046873.12|membrane-bound transcription factor peptidase, site 2 	ENSMUST00000058098.8|Mbtps2|ENSMUSG00000046873.12|membrane-bound transcription factor peptidase, site 2
mm10_v2_chr3_-_84304762_84304809	0.402727	AACACUG	ENSMUST00000107692.1|Trim2|ENSMUSG00000027993.10|tripartite motif-containing 2
mm10_v2_chr15_+_58415456_58415512	0.402535	AACACUG	ENSMUST00000037270.3|D15Ertd621e|ENSMUSG00000037119.3|DNA segment, Chr 15, ERATO Doi 621, expressed
mm10_v2_chr15_-_60824942_60825080	0.400931	AACACUG	ENSMUST00000100635.3|Fam84b|ENSMUSG00000072568.3|family with sequence similarity 84, member B
mm10_v2_chr11_+_16752203_16752215	0.399304	AACACUG	ENSMUST00000102884.3|Egfr|ENSMUSG00000020122.10|epidermal growth factor receptor 	ENSMUST00000020329.6|Egfr|ENSMUSG00000020122.10|epidermal growth factor receptor
mm10_v2_chr19_+_32757497_32757587	0.398911	AACACUG	ENSMUST00000013807.7|Pten|ENSMUSG00000013663.7|phosphatase and tensin homolog
mm10_v2_chr11_+_114675431_114675495	0.397222	AACACUG	ENSMUST00000045779.5|Ttyh2|ENSMUSG00000034714.9|tweety homolog 2 (Drosophila)
mm10_v2_chr6_-_35539765_35539888	0.395665	AACACUG	ENSMUST00000031866.5|Mtpn|ENSMUSG00000029840.5|myotrophin
mm10_v2_chr6_+_143167210_143167267	0.39516	AACACUG	ENSMUST00000032413.4|Etnk1|ENSMUSG00000030275.4|ethanolamine kinase 1
mm10_v2_chr6_+_7844806_7844859	0.392241	AACACUG	ENSMUST00000040159.4|C1galt1|ENSMUSG00000042460.4|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
mm10_v2_chr14_+_27622433_27622543	0.386535	AACACUG	ENSMUST00000090302.5|Erc2|ENSMUSG00000040640.9|ELKS/RAB6-interacting/CAST family member 2
mm10_v2_chr7_-_89338709_89338795	0.385747	AACACUG	ENSMUST00000137723.1|Tmem135|ENSMUSG00000039428.4|transmembrane protein 135 	ENSMUST00000117852.1|Tmem135|ENSMUSG00000039428.4|transmembrane protein 135 	ENSMUST00000041968.3|Tmem135|ENSMUSG00000039428.4|transmembrane protein 135
mm10_v2_chr14_-_25769033_25769083	0.377227	AACACUG	ENSMUST00000069180.7|Zcchc24|ENSMUSG00000055538.7|zinc finger, CCHC domain containing 24
mm10_v2_chr10_-_68278713_68278735	0.374075	AACACUG	ENSMUST00000020106.7|Arid5b|ENSMUSG00000019947.9|AT rich interactive domain 5B (MRF1-like)
mm10_v2_chr9_+_74861888_74861921	0.372368	AACACUG	ENSMUST00000056006.9|Onecut1|ENSMUSG00000043013.9|one cut domain, family member 1
mm10_v2_chr3_+_41555723_41555745	0.370536	AACACUG	ENSMUST00000026865.8|Phf17|ENSMUSG00000025764.8|PHD finger protein 17
mm10_v2_chr18_+_32163073_32163115	0.369356	AACACUG	ENSMUST00000096575.3|Map3k2|ENSMUSG00000024383.8|mitogen-activated protein kinase kinase kinase 2
mm10_v2_chr9_-_100546053_100546092	0.367847	AACACUG	ENSMUST00000116522.1|Nck1|ENSMUSG00000032475.9|non-catalytic region of tyrosine kinase adaptor protein 1
mm10_v2_chr2_+_30237680_30237747	0.367844	AACACUG	ENSMUST00000113654.1|Lrrc8a|ENSMUSG00000007476.12|leucine rich repeat containing 8A 	ENSMUST00000095078.2|Lrrc8a|ENSMUSG00000007476.12|leucine rich repeat containing 8A
mm10_v2_chr6_-_148444336_148444389	0.367333	AACACUG	ENSMUST00000060095.8|Tmtc1|ENSMUSG00000030306.8|transmembrane and tetratricopeptide repeat containing 1 	ENSMUST00000100772.3|Tmtc1|ENSMUSG00000030306.8|transmembrane and tetratricopeptide repeat containing 1
mm10_v2_chr2_+_48814109_48814173	0.365202	AACACUG	ENSMUST00000063886.3|Acvr2a|ENSMUSG00000052155.5|activin receptor IIA
mm10_v2_chr4_+_47353222_47353265	0.361327	AACACUG	ENSMUST00000007757.8|Tgfbr1|ENSMUSG00000007613.9|transforming growth factor, beta receptor I
mm10_v2_chr13_-_45964964_45965001	0.359845	AACACUG	ENSMUST00000180110.1|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000091628.3|Atxn1|ENSMUSG00000046876.9|ataxin 1 	ENSMUST00000167708.2|Atxn1|ENSMUSG00000046876.9|ataxin 1
mm10_v2_chr4_-_103215147_103215201	0.357637	AACACUG	ENSMUST00000150285.1|Slc35d1|ENSMUSG00000028521.11|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
mm10_v2_chr1_-_30949756_30949770	0.356723	AACACUG	ENSMUST00000076587.3|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1 	ENSMUST00000027232.7|Ptp4a1|ENSMUSG00000026064.9|protein tyrosine phosphatase 4a1
mm10_v2_chr9_-_75409352_75409383	0.354741	AACACUG	ENSMUST00000168937.1|Mapk6|ENSMUSG00000042688.10|mitogen-activated protein kinase 6
mm10_v2_chr1_-_13372434_13372457	0.353942	AACACUG	ENSMUST00000081713.4|Ncoa2|ENSMUSG00000005886.8|nuclear receptor coactivator 2
mm10_v2_chr9_+_25252439_25252516	0.353387	AACACUG	ENSMUST00000115272.2|Sept7|ENSMUSG00000001833.10|septin 7 	ENSMUST00000165594.2|Sept7|ENSMUSG00000001833.10|septin 7
mm10_v2_chr5_+_102481374_102481391	0.349885	AACACUG	ENSMUST00000094559.2|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24 	ENSMUST00000073302.5|Arhgap24|ENSMUSG00000057315.8|Rho GTPase activating protein 24
mm10_v2_chr10_-_125328957_125328968	0.348561	AACACUG	ENSMUST00000063318.2|Slc16a7|ENSMUSG00000020102.8|solute carrier family 16 (monocarboxylic acid transporters), member 7
mm10_v2_chr2_+_68861433_68861510	0.347263	AACACUG	ENSMUST00000028426.2|Cers6|ENSMUSG00000027035.4|ceramide synthase 6
mm10_v2_chr5_+_108268897_108268924	0.345266	AACACUG	ENSMUST00000031190.4|Dr1|ENSMUSG00000029265.4|down-regulator of transcription 1
mm10_v2_chr15_-_31530999_31531069	0.344924	AACACUG	ENSMUST00000090227.4|March6|ENSMUSG00000039100.9|membrane-associated ring finger (C3HC4) 6
mm10_v2_chr9_-_103364970_103364996	0.344096	AACACUG	ENSMUST00000116517.2|Cdv3|ENSMUSG00000032803.8|carnitine deficiency-associated gene expressed in ventricle 3
mm10_v2_chr15_+_54571358_54571439	0.343783	AACACUG	ENSMUST00000025356.2|Mal2|ENSMUSG00000024479.2|mal, T cell differentiation protein 2
mm10_v2_chr18_-_38601268_38601355	0.340701	AACACUG	ENSMUST00000025295.6|Spry4|ENSMUSG00000024427.6|sprouty homolog 4 (Drosophila)
mm10_v2_chr12_-_108275409_108275417	0.337938	AACACUG	ENSMUST00000136175.1|Ccdc85c|ENSMUSG00000084883.1|coiled-coil domain containing 85C
mm10_v2_chr9_-_104262900_104262949	0.330835	AACACUG	ENSMUST00000035170.6|Dnajc13|ENSMUSG00000032560.7|DnaJ (Hsp40) homolog, subfamily C, member 13
mm10_v2_chr10_-_94944578_94944578	0.327525	AACACUG	ENSMUST00000099337.3|Plxnc1|ENSMUSG00000074785.4|plexin C1
mm10_v2_chr13_-_63565520_63565520	0.325058	AACACUG	ENSMUST00000021921.5|Ptch1|ENSMUSG00000021466.6|patched homolog 1
mm10_v2_chr5_+_146231211_146231385	0.321447	AACACUG	ENSMUST00000161181.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000161652.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000031640.8|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8 	ENSMUST00000159467.1|Cdk8|ENSMUSG00000029635.9|cyclin-dependent kinase 8
mm10_v2_chr11_+_93886157_93886219	0.321178	AACACUG	ENSMUST00000063718.4|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1 	ENSMUST00000107854.2|Mbtd1|ENSMUSG00000059474.7|mbt domain containing 1
mm10_v2_chr5_-_86172747_86172803	0.320255	AACACUG	ENSMUST00000039373.7|Uba6|ENSMUSG00000035898.7|ubiquitin-like modifier activating enzyme 6
mm10_v2_chr4_+_31964081_31964263	0.319953	AACACUG	ENSMUST00000037607.4|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000080933.6|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000108183.1|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7 	ENSMUST00000108184.2|Map3k7|ENSMUSG00000028284.7|mitogen-activated protein kinase kinase kinase 7
mm10_v2_chr3_+_30602056_30602096	0.317006	AACACUG	ENSMUST00000047502.7|Mynn|ENSMUSG00000037730.8|myoneurin
mm10_v2_chr2_-_120850389_120850418	0.315911	AACACUG	ENSMUST00000143051.1|Ttbk2|ENSMUSG00000090100.1|tau tubulin kinase 2 	ENSMUST00000057135.7|Ttbk2|ENSMUSG00000090100.1|tau tubulin kinase 2 	ENSMUST00000085840.4|Ttbk2|ENSMUSG00000090100.1|tau tubulin kinase 2
mm10_v2_chr2_-_101649501_101649539	0.311276	AACACUG	ENSMUST00000078494.5|Rag1|ENSMUSG00000061311.6|recombination activating gene 1 	ENSMUST00000160722.1|B230118H07Rik|ENSMUSG00000027165.10|RIKEN cDNA B230118H07 gene 	ENSMUST00000160037.1|B230118H07Rik|ENSMUSG00000027165.10|RIKEN cDNA B230118H07 gene
mm10_v2_chr1_-_136346074_136346145	0.308445	AACACUG	ENSMUST00000048309.6|Camsap2|ENSMUSG00000041570.9|calmodulin regulated spectrin-associated protein family, member 2
mm10_v2_chr9_+_47530173_47530373	0.306977	AACACUG	ENSMUST00000114548.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000152459.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000143026.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000085909.2|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000114547.1|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1 	ENSMUST00000034581.3|Cadm1|ENSMUSG00000032076.12|cell adhesion molecule 1
mm10_v2_chr1_+_193173469_193173595	0.306247	AACACUG	ENSMUST00000161235.1|A130010J15Rik|ENSMUSG00000079144.6|RIKEN cDNA A130010J15 gene 	ENSMUST00000110831.2|A130010J15Rik|ENSMUSG00000079144.6|RIKEN cDNA A130010J15 gene 	ENSMUST00000178744.1|A130010J15Rik|ENSMUSG00000079144.6|RIKEN cDNA A130010J15 gene
mm10_v2_chr18_-_47368830_47368878	0.299867	AACACUG	ENSMUST00000019791.7|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 	ENSMUST00000115449.2|Sema6a|ENSMUSG00000019647.10|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm10_v2_chr1_+_133131143_133131283	0.296839	AACACUG	ENSMUST00000052529.3|Ppp1r15b|ENSMUSG00000046062.5|protein phosphatase 1, regulatory (inhibitor) subunit 15b
mm10_v2_chr1_-_165194310_165194433	0.294584	AACACUG	ENSMUST00000043338.4|Sft2d2|ENSMUSG00000040848.6|SFT2 domain containing 2
mm10_v2_chr12_-_98737405_98737515	0.2904	AACACUG	ENSMUST00000170188.1|Ptpn21|ENSMUSG00000021009.8|protein tyrosine phosphatase, non-receptor type 21
mm10_v2_chr1_-_16519284_16519336	0.288569	AACACUG	ENSMUST00000162751.1|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000027052.6|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila) 	ENSMUST00000149320.2|Stau2|ENSMUSG00000025920.13|staufen (RNA binding protein) homolog 2 (Drosophila)
mm10_v2_chr4_+_40143080_40143107	0.279207	AACACUG	ENSMUST00000102973.3|Aco1|ENSMUSG00000028405.9|aconitase 1
mm10_v2_chr14_+_14012491_14012693	0.278717	AACACUG	ENSMUST00000022257.2|Atxn7|ENSMUSG00000021738.4|ataxin 7
mm10_v2_chr2_+_152226839_152226908	0.277006	AACACUG	ENSMUST00000099224.3|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000124791.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide 	ENSMUST00000133119.1|Csnk2a1|ENSMUSG00000074698.4|casein kinase 2, alpha 1 polypeptide
mm10_v2_chr11_+_70700473_70700576	0.275173	AACACUG	ENSMUST00000152618.2|Kif1c|ENSMUSG00000020821.11|kinesin family member 1C 	ENSMUST00000102554.1|Kif1c|ENSMUSG00000020821.11|kinesin family member 1C 	ENSMUST00000094499.4|Kif1c|ENSMUSG00000020821.11|kinesin family member 1C 	ENSMUST00000072187.5|Kif1c|ENSMUSG00000020821.11|kinesin family member 1C
mm10_v2_chr3_+_106482427_106482477	0.272385	AACACUG	ENSMUST00000029508.4|Dennd2d|ENSMUSG00000027901.6|DENN/MADD domain containing 2D
mm10_v2_chr1_-_164458345_164458363	0.264	AACACUG	ENSMUST00000027863.7|Atp1b1|ENSMUSG00000026576.7|ATPase, Na+/K+ transporting, beta 1 polypeptide
mm10_v2_chr2_+_60209887_60210073	0.263527	AACACUG	ENSMUST00000102748.4|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7 	ENSMUST00000102747.1|March7|ENSMUSG00000026977.11|membrane-associated ring finger (C3HC4) 7
mm10_v2_chr6_-_97252779_97252790	0.262795	AACACUG	ENSMUST00000095655.2|Lmod3|ENSMUSG00000044086.7|leiomodin 3 (fetal)
mm10_v2_chr14_-_100149764_100149764	0.259013	AACACUG	ENSMUST00000097079.4|Klf12|ENSMUSG00000072294.4|Kruppel-like factor 12
mm10_v2_chr2_-_73312701_73312724	0.256724	AACACUG	ENSMUST00000058615.9|Cir1|ENSMUSG00000041777.11|corepressor interacting with RBPJ, 1
mm10_v2_chr9_+_68653761_68653786	0.25652	AACACUG	ENSMUST00000034766.7|Rora|ENSMUSG00000032238.11|RAR-related orphan receptor alpha
mm10_v2_chr3_-_41082992_41083046	0.254002	AACACUG	ENSMUST00000058578.7|Pgrmc2|ENSMUSG00000049940.7|progesterone receptor membrane component 2
mm10_v2_chr9_+_59578192_59578337	0.253495	AACACUG	ENSMUST00000118549.1|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6 	ENSMUST00000034840.3|Celf6|ENSMUSG00000032297.5|CUGBP, Elav-like family member 6
mm10_v2_chr12_+_32820304_32820362	0.252408	AACACUG	ENSMUST00000020886.7|Nampt|ENSMUSG00000020572.7|nicotinamide phosphoribosyltransferase
mm10_v2_chr17_+_5841307_5841377	0.250213	AACACUG	ENSMUST00000002436.9|Snx9|ENSMUSG00000002365.9|sorting nexin 9
mm10_v2_chr10_+_60106198_60106221	0.248506	AACACUG	ENSMUST00000121820.2|Spock2|ENSMUSG00000058297.10|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm10_v2_chr5_-_29378337_29378401	0.247028	AACACUG	ENSMUST00000055195.4|Lmbr1|ENSMUSG00000010721.9|limb region 1 	ENSMUST00000179191.1|Lmbr1|ENSMUSG00000010721.9|limb region 1
mm10_v2_chr13_+_40859768_40859822	0.245911	AACACUG	ENSMUST00000110191.2|Gcnt2|ENSMUSG00000021360.9|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme
mm10_v2_chr2_-_116065798_116065853	0.245296	AACACUG	ENSMUST00000110907.1|Meis2|ENSMUSG00000027210.14|Meis homeobox 2 	ENSMUST00000110908.2|Meis2|ENSMUSG00000027210.14|Meis homeobox 2
mm10_v2_chr13_+_75839868_75839881	0.244068	AACACUG	ENSMUST00000022082.7|Glrx|ENSMUSG00000021591.7|glutaredoxin
mm10_v2_chr8_-_90348343_90348386	0.242454	AACACUG	ENSMUST00000109621.3|Tox3|ENSMUSG00000043668.7|TOX high mobility group box family member 3
mm10_v2_chr5_+_72914264_72914304	0.24203	AACACUG	ENSMUST00000144843.1|Slain2|ENSMUSG00000036087.12|SLAIN motif family, member 2
mm10_v2_chr5_+_143464493_143464536	0.238989	AACACUG	ENSMUST00000045593.8|Daglb|ENSMUSG00000039206.10|diacylglycerol lipase, beta
mm10_v2_chr11_-_61579637_61579707	0.23576	AACACUG	ENSMUST00000147501.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000146455.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108711.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108712.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000001063.8|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000108713.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000179936.1|Epn2|ENSMUSG00000001036.11|epsin 2 	ENSMUST00000178202.1|Epn2|ENSMUSG00000001036.11|epsin 2
mm10_v2_chr13_+_104178797_104178872	0.235575	AACACUG	ENSMUST00000022225.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23 	ENSMUST00000069187.5|Trim23|ENSMUSG00000021712.8|tripartite motif-containing 23
mm10_v2_chr13_-_17805093_17805189	0.233382	AACACUG	ENSMUST00000042365.7|Cdk13|ENSMUSG00000041297.7|cyclin-dependent kinase 13
mm10_v2_chr12_+_111538101_111538243	0.232879	AACACUG	ENSMUST00000166123.1|Eif5|ENSMUSG00000021282.10|eukaryotic translation initiation factor 5
mm10_v2_chr19_+_53600377_53600435	0.231903	AACACUG	ENSMUST00000025930.9|Smc3|ENSMUSG00000024974.10|structural maintenance of chromosomes 3
mm10_v2_chr9_+_59750876_59750918	0.231787	AACACUG	ENSMUST00000136740.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000135298.1|Myo9a|ENSMUSG00000039585.9|myosin IXa 	ENSMUST00000128341.1|Myo9a|ENSMUSG00000039585.9|myosin IXa
mm10_v2_chr4_-_118134869_118134962	0.227202	AACACUG	ENSMUST00000097912.1|St3gal3|ENSMUSG00000028538.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENSMUST00000030263.2|St3gal3|ENSMUSG00000028538.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 3 	ENSMUST00000106410.1|St3gal3|ENSMUSG00000028538.6|ST3 beta-galactoside alpha-2,3-sialyltransferase 3
mm10_v2_chr7_-_92669917_92669943	0.226811	AACACUG	ENSMUST00000119954.1|Pcf11|ENSMUSG00000041328.9|cleavage and polyadenylation factor subunit homolog (S. cerevisiae)
mm10_v2_chr7_+_113207465_113207595	0.226736	AACACUG	ENSMUST00000047321.7|Arntl|ENSMUSG00000055116.7|aryl hydrocarbon receptor nuclear translocator-like
mm10_v2_chr11_+_53350783_53350833	0.226096	AACACUG	ENSMUST00000060945.5|Aff4|ENSMUSG00000049470.7|AF4/FMR2 family, member 4
mm10_v2_chr5_-_146585239_146585239	0.225243	AACACUG	ENSMUST00000036211.6|Gpr12|ENSMUSG00000041468.6|G-protein coupled receptor 12
mm10_v2_chr2_+_119547697_119547762	0.220875	AACACUG	ENSMUST00000014221.6|Chp1|ENSMUSG00000014077.7|calcineurin-like EF hand protein 1 	ENSMUST00000119172.1|Chp1|ENSMUSG00000014077.7|calcineurin-like EF hand protein 1
mm10_v2_chr11_-_90390895_90390926	0.217382	AACACUG	ENSMUST00000004051.7|Hlf|ENSMUSG00000003949.10|hepatic leukemia factor
mm10_v2_chr15_+_93398344_93398464	0.216362	AACACUG	ENSMUST00000109256.3|Pphln1|ENSMUSG00000036167.9|periphilin 1 	ENSMUST00000068457.7|Pphln1|ENSMUSG00000036167.9|periphilin 1 	ENSMUST00000049122.8|Pphln1|ENSMUSG00000036167.9|periphilin 1 	ENSMUST00000165935.1|Pphln1|ENSMUSG00000036167.9|periphilin 1
mm10_v2_chr9_+_120303896_120303960	0.215992	AACACUG	ENSMUST00000048121.6|Myrip|ENSMUSG00000041794.6|myosin VIIA and Rab interacting protein
mm10_v2_chr3_+_60501252_60501275	0.213341	AACACUG	ENSMUST00000099087.2|Mbnl1|ENSMUSG00000027763.8|muscleblind-like 1 (Drosophila)
mm10_v2_chr4_+_97777606_97777632	0.212506	AACACUG	ENSMUST00000075448.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A 	ENSMUST00000092532.6|Nfia|ENSMUSG00000028565.12|nuclear factor I/A
mm10_v2_chr5_-_66618772_66618828	0.211257	AACACUG	ENSMUST00000162994.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159512.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENSMUST00000159786.1|Apbb2|ENSMUSG00000029207.10|amyloid beta (A4) precursor protein-binding, family B, member 2
mm10_v2_chr14_-_70520254_70520268	0.207143	AACACUG	ENSMUST00000022693.7|Bmp1|ENSMUSG00000022098.9|bone morphogenetic protein 1
mm10_v2_chr6_+_29348069_29348123	0.205499	AACACUG	ENSMUST00000173216.1|Calu|ENSMUSG00000029767.10|calumenin 	ENSMUST00000031779.10|Calu|ENSMUSG00000029767.10|calumenin 	ENSMUST00000090481.7|Calu|ENSMUSG00000029767.10|calumenin
mm10_v2_chr3_-_144570136_144570227	0.203889	AACACUG	ENSMUST00000043325.7|Hs2st1|ENSMUSG00000040151.8|heparan sulfate 2-O-sulfotransferase 1
mm10_v2_chr5_-_102069905_102069940	0.202615	AACACUG	ENSMUST00000053177.7|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3 	ENSMUST00000174698.1|Wdfy3|ENSMUSG00000043940.8|WD repeat and FYVE domain containing 3
mm10_v2_chr10_-_115251407_115251493	0.20116	AACACUG	ENSMUST00000020339.8|Tbc1d15|ENSMUSG00000020130.8|TBC1 domain family, member 15
mm10_v2_chr6_+_8948608_8948619	0.200535	AACACUG	ENSMUST00000160300.1|Nxph1|ENSMUSG00000046178.3|neurexophilin 1
mm10_v2_chr1_-_186705980_186705999	0.200377	AACACUG	ENSMUST00000045288.8|Tgfb2|ENSMUSG00000039239.9|transforming growth factor, beta 2
mm10_v2_chr19_+_47579602_47579681	0.197602	AACACUG	ENSMUST00000026043.5|Slk|ENSMUSG00000025060.8|STE20-like kinase
mm10_v2_chr12_+_117516479_117516534	0.194836	AACACUG	ENSMUST00000109691.2|Rapgef5|ENSMUSG00000041992.8|Rap guanine nucleotide exchange factor (GEF) 5
mm10_v2_chr5_+_150673739_150673827	0.193677	AACACUG	ENSMUST00000016569.4|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) 	ENSMUST00000038900.8|Pds5b|ENSMUSG00000034021.9|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
mm10_v2_chr11_-_98149551_98149621	0.19202	AACACUG	ENSMUST00000103143.3|Fbxl20|ENSMUSG00000020883.12|F-box and leucine-rich repeat protein 20
mm10_v2_chr7_+_35334175_35334331	0.189045	AACACUG	ENSMUST00000032705.6|Rhpn2|ENSMUSG00000030494.7|rhophilin, Rho GTPase binding protein 2 	ENSMUST00000085556.3|Rhpn2|ENSMUSG00000030494.7|rhophilin, Rho GTPase binding protein 2
mm10_v2_chr18_+_61555258_61555290	0.188374	AACACUG	ENSMUST00000165123.1|Csnk1a1|ENSMUSG00000024576.8|casein kinase 1, alpha 1
mm10_v2_chr2_+_37452231_37452286	0.187889	AACACUG	ENSMUST00000148470.1|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1 	ENSMUST00000066055.3|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1 	ENSMUST00000112920.1|Rabgap1|ENSMUSG00000035437.9|RAB GTPase activating protein 1
mm10_v2_chr3_-_116007399_116007411	0.187817	AACACUG	ENSMUST00000067485.3|Slc30a7|ENSMUSG00000054414.3|solute carrier family 30 (zinc transporter), member 7
mm10_v2_chr15_-_36794498_36794547	0.186344	AACACUG	ENSMUST00000110361.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000022894.7|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 	ENSMUST00000110359.1|Ywhaz|ENSMUSG00000022285.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm10_v2_chr6_+_14901344_14901364	0.185848	AACACUG	ENSMUST00000115477.1|Foxp2|ENSMUSG00000029563.10|forkhead box P2
mm10_v2_chr2_+_71786923_71786978	0.182063	AACACUG	ENSMUST00000112101.1|Itga6|ENSMUSG00000027111.9|integrin alpha 6 	ENSMUST00000028522.3|Itga6|ENSMUSG00000027111.9|integrin alpha 6
mm10_v2_chr8_+_65618009_65618091	0.180854	AACACUG	ENSMUST00000110258.1|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110256.1|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1 	ENSMUST00000110255.1|March1|ENSMUSG00000036469.10|membrane-associated ring finger (C3HC4) 1
mm10_v2_chr18_+_4921662_4921726	0.179638	AACACUG	ENSMUST00000143254.1|Svil|ENSMUSG00000024236.11|supervillin
mm10_v2_chr12_-_86884808_86884842	0.177884	AACACUG	ENSMUST00000038422.6|Irf2bpl|ENSMUSG00000034168.6|interferon regulatory factor 2 binding protein-like
mm10_v2_chr14_+_34673888_34673930	0.17486	AACACUG	ENSMUST00000048263.7|Wapal|ENSMUSG00000041408.10|wings apart-like homolog (Drosophila)
mm10_v2_chr2_+_166805506_166805605	0.174144	AACACUG	ENSMUST00000099078.3|Arfgef2|ENSMUSG00000074582.4|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
mm10_v2_chr2_+_132263136_132263268	0.170375	AACACUG	ENSMUST00000110158.1|Cds2|ENSMUSG00000058793.8|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 	ENSMUST00000103181.4|Cds2|ENSMUSG00000058793.8|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
mm10_v2_chrX_-_143933204_143933311	0.167665	AACACUG	ENSMUST00000112851.1|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000112856.2|Dcx|ENSMUSG00000031285.8|doublecortin 	ENSMUST00000033642.3|Dcx|ENSMUSG00000031285.8|doublecortin
mm10_v2_chr11_+_98701263_98701346	0.166746	AACACUG	ENSMUST00000038886.2|Csf3|ENSMUSG00000038067.2|colony stimulating factor 3 (granulocyte)
mm10_v2_chr4_+_136310952_136310984	0.166143	AACACUG	ENSMUST00000105850.1|Hnrnpr|ENSMUSG00000066037.8|heterogeneous nuclear ribonucleoprotein R 	ENSMUST00000148843.3|Hnrnpr|ENSMUSG00000066037.8|heterogeneous nuclear ribonucleoprotein R
mm10_v2_chr5_+_86804214_86804276	0.163253	AACACUG	ENSMUST00000119339.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1 	ENSMUST00000120498.1|Ythdc1|ENSMUSG00000035851.8|YTH domain containing 1
mm10_v2_chr1_-_80340480_80340512	0.161787	AACACUG	ENSMUST00000163119.1|Cul3|ENSMUSG00000004364.8|cullin 3
mm10_v2_chr11_-_99244058_99244136	0.15834	AACACUG	ENSMUST00000103132.3|Krt222|ENSMUSG00000035849.8|keratin 222 	ENSMUST00000038214.6|Krt222|ENSMUSG00000035849.8|keratin 222
mm10_v2_chr12_+_4917376_4917438	0.152944	AACACUG	ENSMUST00000045664.5|Atad2b|ENSMUSG00000052812.4|ATPase family, AAA domain containing 2B
mm10_v2_chr2_-_132145057_132145118	0.151164	AACACUG	ENSMUST00000028815.8|Slc23a2|ENSMUSG00000027340.9|solute carrier family 23 (nucleobase transporters), member 2
mm10_v2_chr16_-_78576649_78576666	0.150775	AACACUG	ENSMUST00000114220.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed 	ENSMUST00000114219.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed 	ENSMUST00000114218.1|D16Ertd472e|ENSMUSG00000022864.7|DNA segment, Chr 16, ERATO Doi 472, expressed
mm10_v2_chr14_+_48120841_48120869	0.149151	AACACUG	ENSMUST00000073150.4|Peli2|ENSMUSG00000021846.8|pellino 2
mm10_v2_chr11_+_115420138_115420182	0.147961	AACACUG	ENSMUST00000106533.1|Kctd2|ENSMUSG00000016940.12|potassium channel tetramerisation domain containing 2 	ENSMUST00000123345.1|Kctd2|ENSMUSG00000016940.12|potassium channel tetramerisation domain containing 2
mm10_v2_chr1_+_177444653_177444669	0.145755	AACACUG	ENSMUST00000094276.3|Zbtb18|ENSMUSG00000063659.6|zinc finger and BTB domain containing 18
mm10_v2_chr11_+_80428598_80428656	0.144956	AACACUG	ENSMUST00000173938.1|Psmd11|ENSMUSG00000017428.10|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENSMUST00000017572.7|Psmd11|ENSMUSG00000017428.10|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
mm10_v2_chr2_+_29965560_29965717	0.144698	AACACUG	ENSMUST00000113717.1|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000113719.2|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000100225.2|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000113741.1|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000095083.4|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1 	ENSMUST00000046257.7|Sptan1|ENSMUSG00000057738.7|spectrin alpha, non-erythrocytic 1
mm10_v2_chr7_-_28379247_28379263	0.137484	AACACUG	ENSMUST00000051241.5|Zfp36|ENSMUSG00000044786.5|zinc finger protein 36
mm10_v2_chr12_+_108792946_108792988	0.13726	AACACUG	ENSMUST00000021692.7|Yy1|ENSMUSG00000021264.11|YY1 transcription factor
mm10_v2_chr11_-_76846968_76847045	0.135343	AACACUG	ENSMUST00000021201.5|Cpd|ENSMUSG00000020841.5|carboxypeptidase D
mm10_v2_chr10_+_70097102_70097211	0.134707	AACACUG	ENSMUST00000147545.1|Ccdc6|ENSMUSG00000048701.7|coiled-coil domain containing 6
mm10_v2_chr11_+_19924354_19924375	0.131729	AACACUG	ENSMUST00000093299.6|Spred2|ENSMUSG00000045671.11|sprouty-related, EVH1 domain containing 2
mm10_v2_chr6_-_90810118_90810160	0.130909	AACACUG	ENSMUST00000101151.3|Iqsec1|ENSMUSG00000034312.7|IQ motif and Sec7 domain 1
mm10_v2_chr14_+_79587691_79587712	0.130667	AACACUG	ENSMUST00000054908.8|Sugt1|ENSMUSG00000022024.9|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
mm10_v2_chr4_-_134853294_134853345	0.130477	AACACUG	ENSMUST00000030628.8|Tmem57|ENSMUSG00000028826.8|transmembrane protein 57
mm10_v2_chr19_+_36834215_36834297	0.127566	AACACUG	ENSMUST00000025729.5|Tnks2|ENSMUSG00000024811.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
mm10_v2_chr1_-_13589717_13589904	0.126504	AACACUG	ENSMUST00000027068.4|Tram1|ENSMUSG00000025935.4|translocating chain-associating membrane protein 1
mm10_v2_chr13_+_41606216_41606216	0.124602	AACACUG	ENSMUST00000129449.1|Tmem170b|ENSMUSG00000087370.2|transmembrane protein 170B
mm10_v2_chr17_-_10319324_10319380	0.119717	AACACUG	ENSMUST00000097414.3|Qk|ENSMUSG00000062078.8|quaking 	ENSMUST00000042296.7|Qk|ENSMUSG00000062078.8|quaking
mm10_v2_chr2_-_104494400_104494463	0.117793	AACACUG	ENSMUST00000028600.7|Hipk3|ENSMUSG00000027177.8|homeodomain interacting protein kinase 3
mm10_v2_chr1_+_158362261_158362304	0.11643	AACACUG	ENSMUST00000046110.9|Astn1|ENSMUSG00000026587.9|astrotactin 1
mm10_v2_chr5_+_108461222_108461241	0.11597	AACACUG	ENSMUST00000046975.5|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3 	ENSMUST00000112597.1|Pcgf3|ENSMUSG00000033623.7|polycomb group ring finger 3
mm10_v2_chr18_-_31447383_31447415	0.112801	AACACUG	ENSMUST00000025110.3|Syt4|ENSMUSG00000024261.5|synaptotagmin IV
mm10_v2_chr9_+_13662460_13662460	0.112147	AACACUG	ENSMUST00000177755.1|Maml2|ENSMUSG00000031925.10|mastermind like 2 (Drosophila)
mm10_v2_chr16_+_95257646_95257685	0.112057	AACACUG	ENSMUST00000113856.1|Kcnj15|ENSMUSG00000062609.7|potassium inwardly-rectifying channel, subfamily J, member 15 	ENSMUST00000134166.1|Kcnj15|ENSMUSG00000062609.7|potassium inwardly-rectifying channel, subfamily J, member 15 	ENSMUST00000125847.1|Kcnj15|ENSMUSG00000062609.7|potassium inwardly-rectifying channel, subfamily J, member 15 	ENSMUST00000140222.1|Kcnj15|ENSMUSG00000062609.7|potassium inwardly-rectifying channel, subfamily J, member 15
mm10_v2_chr18_+_20665250_20665250	0.11183	AACACUG	ENSMUST00000075312.3|Ttr|ENSMUSG00000061808.3|transthyretin
mm10_v2_chr6_-_100287441_100287465	0.111676	AACACUG	ENSMUST00000101118.2|Rybp|ENSMUSG00000072872.2|RING1 and YY1 binding protein
mm10_v2_chr16_+_45094036_45094053	0.11159	AACACUG	ENSMUST00000061050.5|Ccdc80|ENSMUSG00000022665.8|coiled-coil domain containing 80
mm10_v2_chr2_+_129800451_129800526	0.111277	AACACUG	ENSMUST00000165413.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35 	ENSMUST00000166282.2|Stk35|ENSMUSG00000037885.12|serine/threonine kinase 35
mm10_v2_chr11_-_72135721_72135778	0.11109	AACACUG	ENSMUST00000108508.2|Pitpnm3|ENSMUSG00000040543.10|PITPNM family member 3 	ENSMUST00000075258.6|Pitpnm3|ENSMUSG00000040543.10|PITPNM family member 3
mm10_v2_chr10_+_19356558_19356565	0.110019	AACACUG	ENSMUST00000053225.5|Olig3|ENSMUSG00000045591.5|oligodendrocyte transcription factor 3
mm10_v2_chr11_-_106788486_106788532	0.108698	AACACUG	ENSMUST00000021062.5|Ddx5|ENSMUSG00000020719.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm10_v2_chr5_+_24685815_24685819	0.108555	AACACUG	ENSMUST00000068825.6|Nub1|ENSMUSG00000028954.7|negative regulator of ubiquitin-like proteins 1
mm10_v2_chr5_-_24842579_24842624	0.10824	AACACUG	ENSMUST00000030787.8|Rheb|ENSMUSG00000028945.8|Ras homolog enriched in brain
mm10_v2_chr4_-_35157404_35157500	0.10805	AACACUG	ENSMUST00000102975.3|Mob3b|ENSMUSG00000073910.4|MOB kinase activator 3B
mm10_v2_chr12_-_54862783_54862921	0.107993	AACACUG	ENSMUST00000078124.7|Cfl2|ENSMUSG00000062929.7|cofilin 2, muscle
mm10_v2_chr10_+_29211637_29211649	0.106505	AACACUG	ENSMUST00000092627.4|9330159F19Rik|ENSMUSG00000004360.8|RIKEN cDNA 9330159F19 gene
mm10_v2_chr2_+_91710900_91710970	0.103315	AACACUG	ENSMUST00000142692.1|Harbi1|ENSMUSG00000027243.8|harbinger transposase derived 1 	ENSMUST00000090608.5|Harbi1|ENSMUSG00000027243.8|harbinger transposase derived 1
mm10_v2_chr16_+_33185045_33185153	0.102176	AACACUG	ENSMUST00000039733.8|Osbpl11|ENSMUSG00000022807.8|oxysterol binding protein-like 11
mm10_v2_chr5_-_92083455_92083557	0.101129	AACACUG	ENSMUST00000169094.1|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2 	ENSMUST00000167918.1|G3bp2|ENSMUSG00000029405.10|GTPase activating protein (SH3 domain) binding protein 2
mm10_v2_chr13_-_43480973_43481005	0.0980467	AACACUG	ENSMUST00000144326.2|Ranbp9|ENSMUSG00000038546.8|RAN binding protein 9
mm10_v2_chr2_-_137116624_137116644	0.0979695	AACACUG	ENSMUST00000028735.7|Jag1|ENSMUSG00000027276.7|jagged 1
mm10_v2_chr15_+_4375462_4375511	0.0968018	AACACUG	ENSMUST00000061925.4|Plcxd3|ENSMUSG00000049148.8|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm10_v2_chr5_-_30960236_30960320	0.0958218	AACACUG	ENSMUST00000088063.2|Preb|ENSMUSG00000045302.7|prolactin regulatory element binding
mm10_v2_chr2_+_160645881_160645896	0.0953626	AACACUG	ENSMUST00000109468.2|Top1|ENSMUSG00000070544.6|topoisomerase (DNA) I
mm10_v2_chr1_-_192137998_192138047	0.0924691	AACACUG	ENSMUST00000073279.7|Rcor3|ENSMUSG00000037395.9|REST corepressor 3 	ENSMUST00000110849.3|Rcor3|ENSMUSG00000037395.9|REST corepressor 3
mm10_v2_chr4_-_123750236_123750345	0.0923674	AACACUG	ENSMUST00000102636.3|Akirin1|ENSMUSG00000023075.9|akirin 1
mm10_v2_chr1_-_152090308_152090332	0.0920524	AACACUG	ENSMUST00000044581.7|1700025G04Rik|ENSMUSG00000032666.10|RIKEN cDNA 1700025G04 gene
mm10_v2_chr16_-_50432340_50432409	0.0908967	AACACUG	ENSMUST00000066037.6|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089399.4|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000089404.3|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000114477.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila) 	ENSMUST00000138166.1|Bbx|ENSMUSG00000022641.9|bobby sox homolog (Drosophila)
mm10_v2_chr9_-_45955226_45955250	0.0897105	AACACUG	ENSMUST00000038488.9|Sidt2|ENSMUSG00000034908.9|SID1 transmembrane family, member 2
mm10_v2_chr10_+_56377300_56377338	0.089433	AACACUG	ENSMUST00000068581.7|Gja1|ENSMUSG00000050953.9|gap junction protein, alpha 1
mm10_v2_chr16_-_16560201_16560223	0.0890087	AACACUG	ENSMUST00000162045.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000162124.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4 	ENSMUST00000161861.1|Fgd4|ENSMUSG00000022788.10|FYVE, RhoGEF and PH domain containing 4
mm10_v2_chr11_-_100822525_100822576	0.0871901	AACACUG	ENSMUST00000107358.2|Stat5b|ENSMUSG00000020919.5|signal transducer and activator of transcription 5B
mm10_v2_chr10_+_67537861_67537930	0.0863602	AACACUG	ENSMUST00000048289.7|Egr2|ENSMUSG00000037868.9|early growth response 2 	ENSMUST00000105438.2|Egr2|ENSMUSG00000037868.9|early growth response 2 	ENSMUST00000130933.1|Egr2|ENSMUSG00000037868.9|early growth response 2 	ENSMUST00000146986.1|Egr2|ENSMUSG00000037868.9|early growth response 2
mm10_v2_chr6_+_86438360_86438405	0.0820637	AACACUG	ENSMUST00000050497.7|C87436|ENSMUSG00000046679.10|expressed sequence C87436
mm10_v2_chr4_-_109476666_109476727	0.0811107	AACACUG	ENSMUST00000030284.3|Rnf11|ENSMUSG00000028557.4|ring finger protein 11
mm10_v2_chr18_-_53744509_53744629	0.0807618	AACACUG	ENSMUST00000049811.6|Cep120|ENSMUSG00000048799.7|centrosomal protein 120
mm10_v2_chr3_-_57294880_57294899	0.0802892	AACACUG	ENSMUST00000171384.1|Tm4sf1|ENSMUSG00000027800.8|transmembrane 4 superfamily member 1
mm10_v2_chr5_-_137684665_137684729	0.0776708	AACACUG	ENSMUST00000100544.4|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2 	ENSMUST00000031736.9|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2 	ENSMUST00000151839.1|Agfg2|ENSMUSG00000029722.9|ArfGAP with FG repeats 2
mm10_v2_chr4_-_132212255_132212303	0.0756749	AACACUG	ENSMUST00000152796.1|Ythdf2|ENSMUSG00000040025.11|YTH domain family 2
mm10_v2_chr10_-_91123955_91124059	0.0740247	AACACUG	ENSMUST00000164505.1|Slc25a3|ENSMUSG00000061904.6|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 	ENSMUST00000170810.1|Slc25a3|ENSMUSG00000061904.6|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 	ENSMUST00000076694.6|Slc25a3|ENSMUSG00000061904.6|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3
mm10_v2_chr15_+_102921103_102921132	0.0737927	AACACUG	ENSMUST00000001700.6|Hoxc13|ENSMUSG00000001655.6|homeobox C13
mm10_v2_chr7_+_27862557_27862557	0.072319	AACACUG	ENSMUST00000053722.8|Zfp607|ENSMUSG00000020420.7|zinc finger proten 607
mm10_v2_chr2_-_94010807_94010823	0.0698494	AACACUG	ENSMUST00000111240.1|Alkbh3|ENSMUSG00000040174.8|alkB, alkylation repair homolog 3 (E. coli)
mm10_v2_chr7_+_4137032_4137066	0.0696424	AACACUG	ENSMUST00000128756.1|Leng8|ENSMUSG00000035545.7|leukocyte receptor cluster (LRC) member 8 	ENSMUST00000132086.1|Leng8|ENSMUSG00000035545.7|leukocyte receptor cluster (LRC) member 8 	ENSMUST00000037472.6|Leng8|ENSMUSG00000035545.7|leukocyte receptor cluster (LRC) member 8 	ENSMUST00000117274.1|Leng8|ENSMUSG00000035545.7|leukocyte receptor cluster (LRC) member 8 	ENSMUST00000121270.1|Leng8|ENSMUSG00000035545.7|leukocyte receptor cluster (LRC) member 8
mm10_v2_chr18_-_21300129_21300168	0.0691115	AACACUG	ENSMUST00000049260.6|Garem|ENSMUSG00000042680.7|GRB2 associated, regulator of MAPK1
mm10_v2_chr9_-_44767792_44767845	0.0677304	AACACUG	ENSMUST00000034607.9|Arcn1|ENSMUSG00000032096.9|archain 1
mm10_v2_chr10_+_20312461_20312492	0.0675113	AACACUG	ENSMUST00000092678.3|Bclaf1|ENSMUSG00000037608.9|BCL2-associated transcription factor 1 	ENSMUST00000043881.5|Bclaf1|ENSMUSG00000037608.9|BCL2-associated transcription factor 1
mm10_v2_chr10_-_41072279_41072290	0.0667766	AACACUG	ENSMUST00000061796.6|Gpr6|ENSMUSG00000046922.6|G protein-coupled receptor 6
mm10_v2_chr8_+_78509319_78509399	0.0667312	AACACUG	ENSMUST00000034111.8|Slc10a7|ENSMUSG00000031684.10|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm10_v2_chr15_+_92051153_92051170	0.0665296	AACACUG	ENSMUST00000169825.1|Cntn1|ENSMUSG00000055022.8|contactin 1
mm10_v2_chr2_+_90940397_90940543	0.0662122	AACACUG	ENSMUST00000068726.6|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000005643.7|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000177642.1|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000111451.3|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1 	ENSMUST00000068747.7|Celf1|ENSMUSG00000005506.10|CUGBP, Elav-like family member 1
mm10_v2_chrX_-_41911877_41911912	0.0658389	AACACUG	ENSMUST00000047037.8|Thoc2|ENSMUSG00000037475.9|THO complex 2
mm10_v2_chr2_-_6130117_6130211	0.0636217	AACACUG	ENSMUST00000126551.1|Proser2|ENSMUSG00000045319.7|proline and serine rich 2 	ENSMUST00000054254.5|Proser2|ENSMUSG00000045319.7|proline and serine rich 2 	ENSMUST00000114942.2|Proser2|ENSMUSG00000045319.7|proline and serine rich 2
mm10_v2_chr1_+_132417409_132417464	0.0612815	AACACUG	ENSMUST00000045110.7|Dstyk|ENSMUSG00000042046.9|dual serine/threonine and tyrosine protein kinase
mm10_v2_chr3_+_116594959_116595031	0.06074	AACACUG	ENSMUST00000029571.8|Sass6|ENSMUSG00000027959.9|spindle assembly 6 homolog (C. elegans)
mm10_v2_chr8_-_115707778_115707794	0.0594737	AACACUG	ENSMUST00000109104.1|Maf|ENSMUSG00000055435.6|avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog
mm10_v2_chr11_+_77686155_77686179	0.0594551	AACACUG	ENSMUST00000100802.4|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2 	ENSMUST00000181023.1|Nufip2|ENSMUSG00000037857.10|nuclear fragile X mental retardation protein interacting protein 2
mm10_v2_chr16_+_42907563_42907684	0.059207	AACACUG	ENSMUST00000151244.1|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20 	ENSMUST00000114694.2|Zbtb20|ENSMUSG00000022708.10|zinc finger and BTB domain containing 20
mm10_v2_chr7_-_128461630_128461672	0.0579247	AACACUG	ENSMUST00000106226.2|Tial1|ENSMUSG00000030846.9|Tia1 cytotoxic granule-associated RNA binding protein-like 1
mm10_v2_chr4_-_129189512_129189594	0.0577045	AACACUG	ENSMUST00000117965.1|S100pbp|ENSMUSG00000040928.9|S100P binding protein 	ENSMUST00000106061.2|S100pbp|ENSMUSG00000040928.9|S100P binding protein 	ENSMUST00000072431.6|S100pbp|ENSMUSG00000040928.9|S100P binding protein
mm10_v2_chr14_+_8098196_8098296	0.056949	AACACUG	ENSMUST00000112689.2|Pxk|ENSMUSG00000033885.8|PX domain containing serine/threonine kinase 	ENSMUST00000036682.7|Pxk|ENSMUSG00000033885.8|PX domain containing serine/threonine kinase
mm10_v2_chr18_-_46198810_46198824	0.0563509	AACACUG	ENSMUST00000167364.1|Trim36|ENSMUSG00000033949.5|tripartite motif-containing 36
mm10_v2_chr6_+_30401866_30401965	0.0549767	AACACUG	ENSMUST00000068240.6|Klhdc10|ENSMUSG00000029775.8|kelch domain containing 10 	ENSMUST00000068259.6|Klhdc10|ENSMUSG00000029775.8|kelch domain containing 10
mm10_v2_chr16_-_22265950_22266005	0.0542472	AACACUG	ENSMUST00000161286.1|Tra2b|ENSMUSG00000022858.9|transformer 2 beta homolog (Drosophila)
mm10_v2_chr12_+_51348019_51348061	0.0537672	AACACUG	ENSMUST00000054308.6|G2e3|ENSMUSG00000035293.7|G2/M-phase specific E3 ubiquitin ligase
mm10_v2_chrX_-_10216918_10216921	0.0527301	AACACUG	ENSMUST00000072393.2|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000044598.6|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000073392.4|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000115533.1|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator 	ENSMUST00000115532.1|Rpgr|ENSMUSG00000031174.11|retinitis pigmentosa GTPase regulator
mm10_v2_chr11_+_53567361_53567526	0.0509891	AACACUG	ENSMUST00000057330.8|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000120613.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000173744.1|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A 	ENSMUST00000118353.2|Kif3a|ENSMUSG00000018395.13|kinesin family member 3A
mm10_v2_chr15_-_12592556_12592556	0.050799	AACACUG	ENSMUST00000075317.5|Pdzd2|ENSMUSG00000022197.9|PDZ domain containing 2
mm10_v2_chr12_-_78861636_78861641	0.0501654	AACACUG	ENSMUST00000021536.7|Atp6v1d|ENSMUSG00000021114.8|ATPase, H+ transporting, lysosomal V1 subunit D
mm10_v2_chr9_+_113812547_113812621	0.0500855	AACACUG	ENSMUST00000166734.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000111838.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2 	ENSMUST00000163895.2|Clasp2|ENSMUSG00000033392.9|CLIP associating protein 2
mm10_v2_chr10_-_94035789_94035817	0.04913	AACACUG	ENSMUST00000123201.1|Vezt|ENSMUSG00000036099.10|vezatin, adherens junctions transmembrane protein 	ENSMUST00000119818.1|Vezt|ENSMUSG00000036099.10|vezatin, adherens junctions transmembrane protein
mm10_v2_chr7_+_36698002_36698118	0.048803	AACACUG	ENSMUST00000021641.6|Tshz3|ENSMUSG00000021217.6|teashirt zinc finger family member 3
mm10_v2_chr11_+_103966716_103966871	0.0471058	AACACUG	ENSMUST00000057921.3|Arf2|ENSMUSG00000062421.7|ADP-ribosylation factor 2 	ENSMUST00000063347.5|Arf2|ENSMUSG00000062421.7|ADP-ribosylation factor 2
mm10_v2_chr10_+_112271123_112271123	0.0470703	AACACUG	ENSMUST00000092175.2|Kcnc2|ENSMUSG00000035681.6|potassium voltage gated channel, Shaw-related subfamily, member 2
mm10_v2_chr17_-_34627365_34627525	0.0457243	AACACUG	ENSMUST00000064953.8|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000170345.1|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000171121.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000168391.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2 	ENSMUST00000169067.2|Ppt2|ENSMUSG00000015474.10|palmitoyl-protein thioesterase 2
mm10_v2_chr7_-_44815658_44815682	0.045354	AACACUG	ENSMUST00000107893.1|Atf5|ENSMUSG00000038539.8|activating transcription factor 5
mm10_v2_chr11_+_105589970_105590028	0.0444673	AACACUG	ENSMUST00000168598.1|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENSMUST00000100330.3|Tanc2|ENSMUSG00000053580.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
mm10_v2_chr18_-_77565050_77565162	0.0442678	AACACUG	ENSMUST00000182153.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182146.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000026494.7|Rnf165|ENSMUSG00000025427.8|ring finger protein 165 	ENSMUST00000182024.1|Rnf165|ENSMUSG00000025427.8|ring finger protein 165
mm10_v2_chr11_-_5741141_5741182	0.0439395	AACACUG	ENSMUST00000140922.1|Urgcp|ENSMUSG00000049680.11|upregulator of cell proliferation 	ENSMUST00000093362.5|Urgcp|ENSMUSG00000049680.11|upregulator of cell proliferation
mm10_v2_chr5_-_149053038_149053053	0.0433801	AACACUG	ENSMUST00000085546.6|Hmgb1|ENSMUSG00000066551.6|high mobility group box 1
mm10_v2_chr1_-_58586191_58586323	0.0407393	AACACUG	ENSMUST00000038372.7|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000097724.3|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161000.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B 	ENSMUST00000161600.1|Fam126b|ENSMUSG00000038174.8|family with sequence similarity 126, member B
mm10_v2_chr7_-_80947765_80947780	0.0390562	AACACUG	ENSMUST00000026818.5|Sec11a|ENSMUSG00000025724.6|SEC11 homolog A (S. cerevisiae) 	ENSMUST00000117383.1|Sec11a|ENSMUSG00000025724.6|SEC11 homolog A (S. cerevisiae) 	ENSMUST00000119980.1|Sec11a|ENSMUSG00000025724.6|SEC11 homolog A (S. cerevisiae)
mm10_v2_chr4_-_58553311_58553357	0.0381509	AACACUG	ENSMUST00000107571.1|Lpar1|ENSMUSG00000038668.8|lysophosphatidic acid receptor 1 	ENSMUST00000055018.4|Lpar1|ENSMUSG00000038668.8|lysophosphatidic acid receptor 1
mm10_v2_chr12_+_72536342_72536396	0.0375603	AACACUG	ENSMUST00000044352.6|Pcnxl4|ENSMUSG00000034501.6|pecanex-like 4 (Drosophila)
mm10_v2_chr12_+_69893105_69893105	0.0368382	AACACUG	ENSMUST00000021466.8|Atl1|ENSMUSG00000021066.8|atlastin GTPase 1
mm10_v2_chrX_+_101640056_101640108	0.0340197	AACACUG	ENSMUST00000119299.1|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) 	ENSMUST00000044475.4|Ogt|ENSMUSG00000034160.7|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
mm10_v2_chr10_+_43479140_43479194	0.0328276	AACACUG	ENSMUST00000167488.1|Bend3|ENSMUSG00000038214.8|BEN domain containing 3 	ENSMUST00000040147.7|Bend3|ENSMUSG00000038214.8|BEN domain containing 3
mm10_v2_chr3_+_63976106_63976135	0.0304501	AACACUG	ENSMUST00000029405.7|Gmps|ENSMUSG00000027823.8|guanine monophosphate synthetase
mm10_v2_chr2_-_120609283_120609317	0.0293753	AACACUG	ENSMUST00000102496.1|Lrrc57|ENSMUSG00000027286.10|leucine rich repeat containing 57
mm10_v2_chr4_+_65604984_65605052	0.0286769	AACACUG	ENSMUST00000050850.7|Trim32|ENSMUSG00000051675.7|tripartite motif-containing 32 	ENSMUST00000107366.1|Trim32|ENSMUSG00000051675.7|tripartite motif-containing 32
mm10_v2_chr17_+_25188380_25188418	0.0281295	AACACUG	ENSMUST00000039734.5|Unkl|ENSMUSG00000015127.8|unkempt-like (Drosophila)
mm10_v2_chr10_+_93160824_93160894	0.0274627	AACACUG	ENSMUST00000069965.7|Cdk17|ENSMUSG00000020015.9|cyclin-dependent kinase 17
mm10_v2_chr4_+_152186054_152186134	0.0267856	AACACUG	ENSMUST00000167926.1|Acot7|ENSMUSG00000028937.8|acyl-CoA thioesterase 7
mm10_v2_chr16_+_92058270_92058328	0.0258371	AACACUG	ENSMUST00000047429.8|Mrps6|ENSMUSG00000039680.9|mitochondrial ribosomal protein S6 	ENSMUST00000113975.2|Slc5a3|ENSMUSG00000089774.2|solute carrier family 5 (inositol transporters), member 3
mm10_v2_chr2_+_172549581_172549605	0.0250593	AACACUG	ENSMUST00000030391.2|Tfap2c|ENSMUSG00000028640.5|transcription factor AP-2, gamma
mm10_v2_chrX_+_6577259_6577294	0.0237459	AACACUG	ENSMUST00000089520.2|Shroom4|ENSMUSG00000068270.9|shroom family member 4
mm10_v2_chr8_-_86745950_86746054	0.0235744	AACACUG	ENSMUST00000045296.4|Siah1a|ENSMUSG00000036840.4|seven in absentia 1A
mm10_v2_chr4_+_101419277_101419332	0.0221754	AACACUG	ENSMUST00000102780.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106946.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4 	ENSMUST00000106945.1|Ak4|ENSMUSG00000028527.12|adenylate kinase 4
mm10_v2_chr18_+_69345721_69345811	0.020517	AACACUG	ENSMUST00000078486.6|Tcf4|ENSMUSG00000053477.9|transcription factor 4 	ENSMUST00000114982.1|Tcf4|ENSMUSG00000053477.9|transcription factor 4
mm10_v2_chr13_+_5861489_5861501	0.020218	AACACUG	ENSMUST00000000080.6|Klf6|ENSMUSG00000000078.6|Kruppel-like factor 6
mm10_v2_chr11_-_22982090_22982382	0.0197925	AACACUG	ENSMUST00000160826.1|RP23-242C19.7|ENSMUSG00000098650.1|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3gnt2), transcript variant 2, mRNA 	ENSMUST00000093270.5|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000071068.8|Commd1|ENSMUSG00000051355.12|COMM domain containing 1 	ENSMUST00000159081.1|Commd1|ENSMUSG00000051355.12|COMM domain containing 1
mm10_v2_chr6_+_114643094_114643105	0.0183951	AACACUG	ENSMUST00000032457.10|Atg7|ENSMUSG00000030314.10|autophagy related 7
mm10_v2_chr13_-_105054895_105054930	0.0176184	AACACUG	ENSMUST00000063551.5|Rgs7bp|ENSMUSG00000021719.8|regulator of G-protein signalling 7 binding protein
mm10_v2_chr5_+_17574268_17574293	0.0166514	AACACUG	ENSMUST00000030568.7|Sema3c|ENSMUSG00000028780.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
mm10_v2_chr6_+_108660616_108660682	0.0145328	AACACUG	ENSMUST00000032194.4|Bhlhe40|ENSMUSG00000030103.5|basic helix-loop-helix family, member e40
mm10_v2_chr2_+_153161303_153161339	0.0128472	AACACUG	ENSMUST00000089027.2|Tm9sf4|ENSMUSG00000068040.4|transmembrane 9 superfamily protein member 4
mm10_v2_chr3_+_61002786_61002811	0.0107248	AACACUG	ENSMUST00000029331.1|P2ry1|ENSMUSG00000027765.1|purinergic receptor P2Y, G-protein coupled 1
mm10_v2_chr7_-_118491912_118491975	0.00957954	AACACUG	ENSMUST00000178344.1|Itpripl2|ENSMUSG00000095115.1|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm10_v2_chr3_-_51277470_51277514	0.00925667	AACACUG	ENSMUST00000108053.2|Elf2|ENSMUSG00000037174.12|E74-like factor 2 	ENSMUST00000108051.1|Elf2|ENSMUSG00000037174.12|E74-like factor 2
mm10_v2_chr11_+_17159263_17159357	0.00837051	AACACUG	ENSMUST00000102880.4|Ppp3r1|ENSMUSG00000033953.10|protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)
mm10_v2_chr11_+_85889981_85890063	0.00662303	AACACUG	ENSMUST00000000096.5|Tbx4|ENSMUSG00000000094.6|T-box 4
mm10_v2_chr3_-_123236134_123236157	0.00559772	AACACUG	ENSMUST00000106427.1|Synpo2|ENSMUSG00000050315.7|synaptopodin 2 	ENSMUST00000106426.1|Synpo2|ENSMUSG00000050315.7|synaptopodin 2 	ENSMUST00000051443.5|Synpo2|ENSMUSG00000050315.7|synaptopodin 2
mm10_v2_chr14_+_45219993_45219993	0.003981	AACACUG	ENSMUST00000146150.1|Gpr137c|ENSMUSG00000049092.10|G protein-coupled receptor 137C
mm10_v2_chr10_-_116581478_116581511	0.00319488	AACACUG	ENSMUST00000105267.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000105265.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000167706.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000168036.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000169921.1|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2 	ENSMUST00000020374.5|Cnot2|ENSMUSG00000020166.8|CCR4-NOT transcription complex, subunit 2
mm10_v2_chr1_+_32172711_32172806	0.00172269	AACACUG	ENSMUST00000027226.5|Khdrbs2|ENSMUSG00000026058.5|KH domain containing, RNA binding, signal transduction associated 2
mm10_v2_chr9_+_49340662_49340662	0.00126113	AACACUG	ENSMUST00000075764.6|Drd2|ENSMUSG00000032259.7|dopamine receptor D2
mm10_v2_chr12_-_84218835_84218890	0.00121986	AACACUG	ENSMUST00000046266.6|Elmsan1|ENSMUSG00000042507.8|ELM2 and Myb/SANT-like domain containing 1
