avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Dmbx1 | mm10_v2_chr4_-_115939923_115939928 | -0.34 | 4.4e-02 | Click! |
Gsc2 | mm10_v2_chr16_-_17915059_17915059 | -0.20 | 2.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_+_37054818 Show fit | 5.65 |
ENSMUST00000120052.1
|
leucine-rich repeat, immunoglobulin-like and transmembrane domains 1 |
|
chr14_+_37068042 Show fit | 5.35 |
ENSMUST00000057176.3
|
leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 |
|
chr2_-_24049389 Show fit | 4.44 |
ENSMUST00000051416.5
|
histamine N-methyltransferase |
|
chr2_+_102658640 Show fit | 3.96 |
ENSMUST00000080210.3
|
solute carrier family 1 (glial high affinity glutamate transporter), member 2 |
|
chr2_+_102659213 Show fit | 3.88 |
ENSMUST00000111213.1
|
solute carrier family 1 (glial high affinity glutamate transporter), member 2 |
|
chr16_-_46010212 Show fit | 2.85 |
ENSMUST00000130481.1
|
phosphatidylinositol-specific phospholipase C, X domain containing 2 |
|
chr6_+_3993776 Show fit | 2.80 |
ENSMUST00000031673.5
|
guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 |
|
chr7_-_15879844 Show fit | 2.51 |
ENSMUST00000172758.1
ENSMUST00000044434.6 |
cone-rod homeobox containing gene |
|
chr14_-_118052235 Show fit | 2.43 |
ENSMUST00000022725.2
|
dopachrome tautomerase |
|
chr7_+_43712505 Show fit | 2.33 |
ENSMUST00000066834.6
|
kallikrein related-peptidase 13 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 7.8 | GO:0070779 | D-aspartate transport(GO:0070777) D-aspartate import(GO:0070779) |
0.9 | 4.4 | GO:0001692 | histamine metabolic process(GO:0001692) |
0.1 | 3.7 | GO:0007602 | phototransduction(GO:0007602) |
0.0 | 3.7 | GO:0016042 | lipid catabolic process(GO:0016042) |
0.3 | 3.4 | GO:0018298 | protein-chromophore linkage(GO:0018298) |
0.0 | 3.1 | GO:0007623 | circadian rhythm(GO:0007623) |
1.0 | 3.0 | GO:0006583 | melanin biosynthetic process from tyrosine(GO:0006583) |
0.0 | 2.0 | GO:1904893 | negative regulation of JAK-STAT cascade(GO:0046426) negative regulation of STAT cascade(GO:1904893) |
0.1 | 1.7 | GO:0048733 | sebaceous gland development(GO:0048733) |
0.3 | 1.6 | GO:0001561 | fatty acid alpha-oxidation(GO:0001561) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 7.8 | GO:0030673 | axolemma(GO:0030673) |
0.1 | 7.1 | GO:0001750 | photoreceptor outer segment(GO:0001750) |
0.0 | 5.6 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.1 | 3.0 | GO:0042470 | melanosome(GO:0042470) pigment granule(GO:0048770) |
0.0 | 2.7 | GO:0014704 | intercalated disc(GO:0014704) |
0.1 | 1.7 | GO:0045095 | keratin filament(GO:0045095) |
0.1 | 1.3 | GO:0012510 | trans-Golgi network transport vesicle membrane(GO:0012510) |
0.1 | 1.2 | GO:0008385 | IkappaB kinase complex(GO:0008385) |
0.2 | 0.8 | GO:0097058 | CRLF-CLCF1 complex(GO:0097058) |
0.0 | 0.8 | GO:0005882 | intermediate filament(GO:0005882) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 7.8 | GO:0015501 | glutamate:sodium symporter activity(GO:0015501) |
0.0 | 4.4 | GO:0008170 | N-methyltransferase activity(GO:0008170) |
0.0 | 3.5 | GO:0008081 | phosphoric diester hydrolase activity(GO:0008081) |
0.4 | 3.4 | GO:0008020 | G-protein coupled photoreceptor activity(GO:0008020) |
0.2 | 2.9 | GO:0043522 | leucine zipper domain binding(GO:0043522) |
0.0 | 2.7 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 2.4 | GO:0016863 | intramolecular oxidoreductase activity, transposing C=C bonds(GO:0016863) |
0.1 | 1.7 | GO:0005550 | pheromone binding(GO:0005550) |
0.2 | 1.6 | GO:0030976 | thiamine pyrophosphate binding(GO:0030976) |
0.1 | 1.5 | GO:0008429 | phosphatidylethanolamine binding(GO:0008429) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.0 | PID RHODOPSIN PATHWAY | Visual signal transduction: Rods |
0.1 | 1.7 | PID CONE PATHWAY | Visual signal transduction: Cones |
0.0 | 1.3 | PID P75 NTR PATHWAY | p75(NTR)-mediated signaling |
0.0 | 1.2 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.0 | 0.6 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.0 | 0.5 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
0.0 | 0.5 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.8 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.4 | 3.4 | REACTOME OPSINS | Genes involved in Opsins |
0.6 | 2.8 | REACTOME OLFACTORY SIGNALING PATHWAY | Genes involved in Olfactory Signaling Pathway |
0.0 | 1.6 | REACTOME PEROXISOMAL LIPID METABOLISM | Genes involved in Peroxisomal lipid metabolism |
0.1 | 1.3 | REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS | Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins |
0.1 | 1.2 | REACTOME IKK COMPLEX RECRUITMENT MEDIATED BY RIP1 | Genes involved in IKK complex recruitment mediated by RIP1 |
0.0 | 1.1 | REACTOME AMINE LIGAND BINDING RECEPTORS | Genes involved in Amine ligand-binding receptors |
0.0 | 0.9 | REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS | Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis |
0.0 | 0.7 | REACTOME INCRETIN SYNTHESIS SECRETION AND INACTIVATION | Genes involved in Incretin Synthesis, Secretion, and Inactivation |
0.0 | 0.5 | REACTOME PKA MEDIATED PHOSPHORYLATION OF CREB | Genes involved in PKA-mediated phosphorylation of CREB |