GSE58827: Dynamics of the Mouse Liver


Results for Arid5a

Z-value: 0.35

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Transcription factors associated with Arid5a

Gene Symbol Gene ID Gene Info
ENSMUSG00000037447.10 AT rich interactive domain 5A (MRF1-like)

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot

Activity profile of Arid5a motif

Sorted Z-values of Arid5a motif

Promoter Log-likelihood Transcript Gene Gene Info
chr2_+_58754910 2.34 ENSMUST00000059102.6
uridine phosphorylase 2
chr2_+_58755177 2.33 ENSMUST00000102755.3
uridine phosphorylase 2
chr10_-_115362191 1.76 ENSMUST00000092170.5
transmembrane protein 19
chr7_-_105600103 1.15 ENSMUST00000033185.8
chr6_-_119467210 1.13 ENSMUST00000118120.1
wingless-related MMTV integration site 5B
chr5_-_31295862 0.93 ENSMUST00000041266.7
fibronectin type III domain containing 4
chrM_+_8600 0.37 ENSMUST00000082409.1
mitochondrially encoded cytochrome c oxidase III
chr10_+_52391606 0.35 ENSMUST00000067085.4
chr1_-_172057573 0.33 ENSMUST00000059794.3
nescient helix loop helix 1
chr2_+_62046623 0.32 ENSMUST00000112480.2
solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
chrM_+_7759 0.29 ENSMUST00000082407.1
mitochondrially encoded ATP synthase 8
mitochondrially encoded ATP synthase 6
chr2_+_62046580 0.25 ENSMUST00000054484.8
solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
chr11_-_58534825 0.22 ENSMUST00000170009.1
olfactory receptor 330
chrX_-_157415286 0.21 ENSMUST00000079945.4
phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets)
chr2_+_62046462 0.16 ENSMUST00000102735.3
solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
chr2_+_144033059 0.13 ENSMUST00000037722.2
barrier to autointegration factor 2
chr3_-_146781351 0.13 ENSMUST00000005164.7
protein kinase, cAMP dependent, catalytic, beta
chr5_+_68031775 0.11 ENSMUST00000094715.4
glutaredoxin, cysteine rich 1
chr14_+_124005355 0.05 ENSMUST00000166105.1
predicted gene, 17615
chr2_+_111780313 0.05 ENSMUST00000054004.1
olfactory receptor 1302
chrX_-_134111852 0.01 ENSMUST00000033610.6
NADPH oxidase 1
chr1_-_163085643 0.01 ENSMUST00000096608.4
maestro heat-like repeat family member 9

Network of associatons between targets according to the STRING database.

First level regulatory network of Arid5a

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 GO:0015886 heme transport(GO:0015886)
0.0 4.6 GO:0009166 nucleotide catabolic process(GO:0009166)
0.0 0.7 GO:0021860 pyramidal neuron development(GO:0021860)
0.0 1.1 GO:0045600 positive regulation of fat cell differentiation(GO:0045600)
0.0 0.1 GO:1901621 negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning(GO:1901621)
0.0 0.1 GO:0048563 post-embryonic organ morphogenesis(GO:0048563)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 4.7 GO:0045098 type III intermediate filament(GO:0045098)
0.1 0.7 GO:0097441 basilar dendrite(GO:0097441)
0.0 0.3 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.0 0.4 GO:0005614 interstitial matrix(GO:0005614)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 4.7 GO:0004850 uridine phosphorylase activity(GO:0004850)
0.3 1.2 GO:0015232 heme transporter activity(GO:0015232)
0.0 0.7 GO:0008510 sodium:bicarbonate symporter activity(GO:0008510)
0.0 1.1 GO:0005109 frizzled binding(GO:0005109)
0.0 0.4 GO:0015002 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 0.1 GO:0004691 cAMP-dependent protein kinase activity(GO:0004691)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 4.7 REACTOME PYRIMIDINE CATABOLISM Genes involved in Pyrimidine catabolism