ISMARA results: AACGGAA

Project

GSE58827: Dynamics of the Mouse Liver

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Results for AACGGAA

Z-value: 0.10

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miRNA associated with seed AACGGAA

Name	miRBASE accession
mmu-miR-191-5p miRBase	MIMAT0000221

Activity profile of AACGGAA motif

Sorted Z-values of AACGGAA motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr4_+_97777606 Show fit	0.21	ENSMUST00000075448.6 ENSMUST00000092532.6	Nfia Ensembl NCBI MGI UniProt Show fit	nuclear factor I/A
chr2_+_167688915 Show fit	0.20	ENSMUST00000070642.3	Cebpb Ensembl NCBI MGI UniProt Show fit	CCAAT/enhancer binding protein (C/EBP), beta
chr5_+_30814571 Show fit	0.13	ENSMUST00000031058.8	Mapre3 Ensembl NCBI MGI UniProt Show fit	microtubule-associated protein, RP/EB family, member 3
chr11_+_88068242 Show fit	0.06	ENSMUST00000018521.4	Vezf1 Ensembl NCBI MGI UniProt Show fit	vascular endothelial zinc finger 1
chrX_-_13846508 Show fit	0.06	ENSMUST00000115436.2 ENSMUST00000033321.4 ENSMUST00000115438.3	Cask Ensembl NCBI MGI UniProt Show fit	calcium/calmodulin-dependent serine protein kinase (MAGUK family)
chr4_+_106561027 Show fit	0.06	ENSMUST00000047973.3	Dhcr24 Ensembl NCBI MGI UniProt Show fit	24-dehydrocholesterol reductase
chr14_-_25769033 Show fit	0.05	ENSMUST00000069180.7	Zcchc24 Ensembl NCBI MGI UniProt Show fit	zinc finger, CCHC domain containing 24
chr6_-_99266494 Show fit	0.04	ENSMUST00000113326.2	Foxp1 Ensembl NCBI MGI UniProt Show fit	forkhead box P1
chr15_-_102516806 Show fit	0.04	ENSMUST00000169162.1 ENSMUST00000023812.2 ENSMUST00000165174.1 ENSMUST00000169367.1 ENSMUST00000169377.1	Map3k12 Ensembl NCBI MGI UniProt Show fit	mitogen-activated protein kinase kinase kinase 12
chr15_+_58889208 Show fit	0.04	ENSMUST00000036904.6	Rnf139 Ensembl NCBI MGI UniProt Show fit	ring finger protein 139

Showing 1 to 10 of 20 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AACGGAA

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0002432	granuloma formation(GO:0002432)
0.0	0.2	GO:0072189	ureter development(GO:0072189)
0.0	0.1	GO:1903031	regulation of microtubule plus-end binding(GO:1903031) positive regulation of microtubule plus-end binding(GO:1903033)
0.0	0.0	GO:0060061	Spemann organizer formation(GO:0060061)

Showing 1 to 4 of 4 entries

Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0036488	CHOP-C/EBP complex(GO:0036488)

Showing 1 to 1 of 1 entries